HG10011651 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10011651
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr01: 8740297 .. 8743156 (+)
RNA-Seq ExpressionHG10011651
SyntenyHG10011651
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCATGGACGGCGGCAGCTCGCCGCACAGTTCCGTCTCGCAAGTCAGTTTCTACGGCTCAAATCCCCTCACTAACTCATCGTCGCGGTCTCGCCGGCGGTGGCGGTATTAACCTTCTCCATTGTTTGCTCCCTCCATTGCTTTTTTTACAGTCTGTTATTTCGTTTGTCCTTCACCTCGAGCTGATGATTGGATGCTGAGAAACTTCGGAAATGGAAGAAAGTAGAATTTTATGTGCTTATTTCGGTATTATCTTTGTTACTCGATGAATTAGGAAGAACCAGTTGAACTGGCTCCGCTGTGCAGATTTTTCTTTTCCTCTATGATTTTGCCTTTGGGGCTTTCTTTCTCGATTTCTGAATGATTGGCTTCCAAATTAGGCTTTGCGCCCATTTTCGATATCTGAAATTGTTCATCTCATATTAAGAATTTGTTGAATCACTGCGGTCTGCCCTATGTTGTAAATCCACTTCTACGCTACTCGCAAACTTTTACAAATTTTATAGATTCGGAAACAAATTAGAAGTTGCATAAACTTGATTTTATAACGTATTCTTTGTGCAATTCAAACCCAAACTTTCTAAACCAAGCCTTGTATACTGAGAATTTATTGTCATCTTTCCTCTGCGTTGAAAAGTTTGCTTCTGATTCATCATGTTAATGCTGTTATCAAACTTTCGAGCTGAAGTAATTGATGAACTGTTGGATCTACAAGTAATTTGTTTGTTCTGCTTTTGTAATCTTGCAGATCATCATGGACCTCCGAAGGTGAACTTTTGGGAGGATCCATTTAATCCATCCAGATGGAAAGGAGAACATGTGAGCATGGTTTAGTTTTTTAAATTGATTATCATCCTCATTTAGGTCTTGTTTGGTAACTTTTTCGTTTTTGGTTTTTGATTTTTGAAAATTAAGCATATTTTCTCTCAGTTTCTTACTATGATTTGCATCTTATTAAGTACAATAGTTGTATTCTTAACTAAATTCTAAAAACAAAAACAACTTTTTAAAAACAGTTTTTGTTTTAAGTTTTCAGAACCTAGTTTGGTTTTTGAAAATGTTGGTAAAAAGTAGATTAAAAAGCAAGAAGTTTAAAGATGAAATGAGTGTTTATAGGCTTAATTTTCAAAAACTAAAAACTAAAAACGAAATGATTACCAAACTAGGCTTAAATGCTAGTTACTCTTTCAACTTGTATCACTTGAACTTTGATTATTTCCATCATATTCCTCCATGATGCATGAACATTTTAGTTTGGTTAACATGTTTGCGTCTTAACTCATGTTGGACGCTTTGACATTCCCTGACATTTATCGAAAACTCCACAATGGATGTTGTGTAATATACTAGTTAAGAAGAAATCGAGTACATGTCAATTACTTAAATCCCGTGGCGAACAGTCATGAATTGTTTGGAAACAATTATTAGACACATGAGTAATGCTATCTGCCATCTTATAAACATCTTCTAATTGATTGATGTCCTGCATTGGTTTTTTATCATCACTACACATCTTACTTAACATATATGTGTATTCACAGTTTGTGATTGTGTCTTTGACTGGATGGGGTTTAGTTCTTTATGGAGCCTACGAGTTCTTCACTAAAGGCAAGAAGGAAGAGGTATGGCTTTTTTAGATCTTTATTGAAGGAAAATATGATTAATATGATTTGTTTTTCCTTCCCAAAAGAAACTAACTTTGAGAAGTAAGTAATGAGCTGCTTTATTGTGGGTTTTGTTGCTCGTGATTCAGTTTCATGAATTGATAGTGTCCTTCTCGTAATGTGTTGTGTTGGTGTGTCACCCACTACTTTCACTAAGATACAGTCACATATCGAGAAACAATCACATTAAAAATCTCTTATTCTCTTTATTTATTGTGTTTTTTTAAAGACTACATGTCTATCCATTCATTTAATTTTTGTTATGAATAATTATATCAATAAATAGTTTATAGCCTTCGAGATTAATTTATTATTATTAGATTGCATACTTGCACTGATATGTTTGCTTGTCAATGGATCAATACATTTTTTATGCGTTACTATCTATTCTTATACTAATCTACGTGTTTGACTTGGATTTGTTTATACGTGCTGATATAGTAGTTTATAACTTAAATAATTTAGCATTATTTGATAACCATTTGGTATATTTTTAGTTTTGAAAATTGTGCTTGTTTTCTAACAATTTCTTATCATGTTTTTCATTTTTATAGGTAGAAGAGTTGGTTTCTTAACAAAATTCTAATAACAAAACTAGGTTTTTGGAAATTACTTTTTTGTAATTTTCAAAATTTAACTTGATCTTTGAAGACGTTAGTAAAAAGTAGACAATAAATCAAAGAAACCTAGGTGGAAGGGGTGTTTATAAACTTCAGTTTTAAAAATCAAAAGTCAAATGATTACCAAACGAGACCCTAGTGGTGAACAATTGTTTTAGAAATTCCCAGTTCTGTAAGAAGCTTTTGGTTTATTTTTTAAAATATTAAAGGTTAAACTAAAGTTTAAGTTTTTAACTTCGATGTTTGCATCTATTTGGTCTTAAACTTTCAATTTCTTATTTATAGATTCTTATCAAATTTGAGATATTTAAATTTTATGTCTAAACATAAACTTTCAATTTTGTCTAGTAGATCTATTAATAAACCACAATTCAGGGGTTAAATCCAACATTCTGGATCCGATTAATAGCTTTAAGAGCTAGTCCGTATTTATCGGTACAGAAAATGTGGGTTAAAAAATATCAATAGTGACCTTTCTTTTTCTCTACATTTTATTGCTGAATGGCTTAGGCATGGTTGCTCTAACTTGCCTCTGTTCTCCCCTGCAGAAAGTTGGAGATGGAAAACACTAG

mRNA sequence

ATGGCGGCATGGACGGCGGCAGCTCGCCGCACAGTTCCGTCTCGCAAGTCAGTTTCTACGGCTCAAATCCCCTCACTAACTCATCGTCGCGGTCTCGCCGGCGGTGGCGATCATCATGGACCTCCGAAGGTGAACTTTTGGGAGGATCCATTTAATCCATCCAGATGGAAAGGAGAACATTTTGTGATTGTGTCTTTGACTGGATGGGGTTTAGTTCTTTATGGAGCCTACGAGTTCTTCACTAAAGGCAAGAAGGAAGAGAAAGTTGGAGATGGAAAACACTAG

Coding sequence (CDS)

ATGGCGGCATGGACGGCGGCAGCTCGCCGCACAGTTCCGTCTCGCAAGTCAGTTTCTACGGCTCAAATCCCCTCACTAACTCATCGTCGCGGTCTCGCCGGCGGTGGCGATCATCATGGACCTCCGAAGGTGAACTTTTGGGAGGATCCATTTAATCCATCCAGATGGAAAGGAGAACATTTTGTGATTGTGTCTTTGACTGGATGGGGTTTAGTTCTTTATGGAGCCTACGAGTTCTTCACTAAAGGCAAGAAGGAAGAGAAAGTTGGAGATGGAAAACACTAG

Protein sequence

MAAWTAAARRTVPSRKSVSTAQIPSLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIVSLTGWGLVLYGAYEFFTKGKKEEKVGDGKH
Homology
BLAST of HG10011651 vs. NCBI nr
Match: KAA0046869.1 (hypothetical protein E6C27_scaffold230G00240 [Cucumis melo var. makuwa] >TYK03277.1 hypothetical protein E5676_scaffold298G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 2.0e-37
Identity = 77/87 (88.51%), Postives = 78/87 (89.66%), Query Frame = 0

Query: 1  MAAWTAAARRTVPSRKSVSTAQIPSLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEH 60
          MAAWTAAARR V S  SVST Q  SL HRRGLAGG DHHGPPKVNFWEDPFNPSRWKGEH
Sbjct: 1  MAAWTAAARRIVLSHNSVSTPQFASLKHRRGLAGGADHHGPPKVNFWEDPFNPSRWKGEH 60

Query: 61 FVIVSLTGWGLVLYGAYEFFTKGKKEE 88
          FVIVSLTGWGLVLYGAY+FFTKGKKEE
Sbjct: 61 FVIVSLTGWGLVLYGAYDFFTKGKKEE 87

BLAST of HG10011651 vs. NCBI nr
Match: KAE8650170.1 (hypothetical protein Csa_010956 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 2.2e-36
Identity = 75/87 (86.21%), Postives = 78/87 (89.66%), Query Frame = 0

Query: 1  MAAWTAAARRTVPSRKSVSTAQIPSLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEH 60
          MAAW AA RR + S  S+ST QI SLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWK EH
Sbjct: 1  MAAWMAAPRRILLSHNSLSTPQIASLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWKREH 60

Query: 61 FVIVSLTGWGLVLYGAYEFFTKGKKEE 88
          FVIVSLTGWGLVLYGAY+FFTKGKKEE
Sbjct: 61 FVIVSLTGWGLVLYGAYDFFTKGKKEE 87

BLAST of HG10011651 vs. NCBI nr
Match: KAF3962262.1 (hypothetical protein CMV_013205 [Castanea mollissima])

HSP 1 Score: 148.7 bits (374), Expect = 2.6e-32
Identity = 72/102 (70.59%), Postives = 80/102 (78.43%), Query Frame = 0

Query: 1   MAAWTAAARRTV-----PSRKSVSTAQIPSLTHRRGLAGGGDHHGPPKVNFWEDPFNPSR 60
           MAAWT AAR+ V      S K+ STAQ  SL HRRGLAGGGDHHGPPKVNFW+DP +PS+
Sbjct: 1   MAAWTGAARQAVNLARLSSPKTASTAQAASLIHRRGLAGGGDHHGPPKVNFWQDPLSPSK 60

Query: 61  WKGEHFVIVSLTGWGLVLYGAYEFFTK---GKKEEKVGDGKH 95
           WK EHFVIVSLTGWGL+ YG Y+FFTK   GKKEEKVG+  H
Sbjct: 61  WKEEHFVIVSLTGWGLLFYGGYKFFTKGKNGKKEEKVGEPSH 102

BLAST of HG10011651 vs. NCBI nr
Match: XP_015896402.1 (uncharacterized protein LOC107430112 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-31
Identity = 72/102 (70.59%), Postives = 80/102 (78.43%), Query Frame = 0

Query: 1   MAAWTAAARRT-----VPSRKSVSTAQIPSLTHRRGLAGGGDHHGPPKVNFWEDPFNPSR 60
           MAA T AAR+      + S KS STAQ  SL HRRGLAGGGDHHGPPKVNFW+DP NPS+
Sbjct: 1   MAACTLAARQAANLLRLSSPKSASTAQAASLVHRRGLAGGGDHHGPPKVNFWQDPLNPSK 60

Query: 61  WKGEHFVIVSLTGWGLVLYGAYEFFTKGKK---EEKVGDGKH 95
           WK EHFVIVSLTGWGL+LYG Y++FTKGKK   EEKVG+  H
Sbjct: 61  WKEEHFVIVSLTGWGLLLYGGYKYFTKGKKDNEEEKVGEPSH 102

BLAST of HG10011651 vs. NCBI nr
Match: XP_024032987.1 (uncharacterized protein LOC21393485 [Morus notabilis])

HSP 1 Score: 144.8 bits (364), Expect = 3.7e-31
Identity = 70/102 (68.63%), Postives = 77/102 (75.49%), Query Frame = 0

Query: 1   MAAWTAAARRT-----VPSRKSVSTAQIPSLTHRRGLAGGGDHHGPPKVNFWEDPFNPSR 60
           MAAWTAAAR+      + + K  STAQ  SL HRRGLAGGGDHHGPPKVNFWEDP +PSR
Sbjct: 1   MAAWTAAARQAANLARLSTPKPASTAQATSLVHRRGLAGGGDHHGPPKVNFWEDPLSPSR 60

Query: 61  WKGEHFVIVSLTGWGLVLYGAYEFFTKG---KKEEKVGDGKH 95
           WK EHFVIVSLTGWGL  YG Y+F T+G   KKEE VG+  H
Sbjct: 61  WKEEHFVIVSLTGWGLAFYGGYKFLTRGKKDKKEENVGESSH 102

BLAST of HG10011651 vs. ExPASy TrEMBL
Match: A0A0A0L362 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099740 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.3e-41
Identity = 81/94 (86.17%), Postives = 85/94 (90.43%), Query Frame = 0

Query: 1  MAAWTAAARRTVPSRKSVSTAQIPSLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEH 60
          MAAW AA RR + S  S+ST QI SLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWK EH
Sbjct: 1  MAAWMAAPRRILLSHNSLSTPQIASLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWKREH 60

Query: 61 FVIVSLTGWGLVLYGAYEFFTKGKKEEKVGDGKH 95
          FVIVSLTGWGLVLYGAY+FFTKGKKEEKVGDG+H
Sbjct: 61 FVIVSLTGWGLVLYGAYDFFTKGKKEEKVGDGRH 94

BLAST of HG10011651 vs. ExPASy TrEMBL
Match: A0A5A7U055 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001040 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.8e-38
Identity = 77/87 (88.51%), Postives = 78/87 (89.66%), Query Frame = 0

Query: 1  MAAWTAAARRTVPSRKSVSTAQIPSLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEH 60
          MAAWTAAARR V S  SVST Q  SL HRRGLAGG DHHGPPKVNFWEDPFNPSRWKGEH
Sbjct: 1  MAAWTAAARRIVLSHNSVSTPQFASLKHRRGLAGGADHHGPPKVNFWEDPFNPSRWKGEH 60

Query: 61 FVIVSLTGWGLVLYGAYEFFTKGKKEE 88
          FVIVSLTGWGLVLYGAY+FFTKGKKEE
Sbjct: 61 FVIVSLTGWGLVLYGAYDFFTKGKKEE 87

BLAST of HG10011651 vs. ExPASy TrEMBL
Match: A0A6P4AKA6 (uncharacterized protein LOC107430112 isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107430112 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.1e-32
Identity = 72/102 (70.59%), Postives = 80/102 (78.43%), Query Frame = 0

Query: 1   MAAWTAAARRT-----VPSRKSVSTAQIPSLTHRRGLAGGGDHHGPPKVNFWEDPFNPSR 60
           MAA T AAR+      + S KS STAQ  SL HRRGLAGGGDHHGPPKVNFW+DP NPS+
Sbjct: 1   MAACTLAARQAANLLRLSSPKSASTAQAASLVHRRGLAGGGDHHGPPKVNFWQDPLNPSK 60

Query: 61  WKGEHFVIVSLTGWGLVLYGAYEFFTKGKK---EEKVGDGKH 95
           WK EHFVIVSLTGWGL+LYG Y++FTKGKK   EEKVG+  H
Sbjct: 61  WKEEHFVIVSLTGWGLLLYGGYKYFTKGKKDNEEEKVGEPSH 102

BLAST of HG10011651 vs. ExPASy TrEMBL
Match: A0A6A6KAX8 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_009174 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.1e-31
Identity = 70/102 (68.63%), Postives = 78/102 (76.47%), Query Frame = 0

Query: 1   MAAWTAAARR-----TVPSRKSVSTAQIPSLTHRRGLAGGGDHHGPPKVNFWEDPFNPSR 60
           MAAWTAAAR+     T+ S +  S  Q  SL HRRGLAGGGDHHGPPKVNFW+DP NPS+
Sbjct: 1   MAAWTAAARQAANLTTLSSPRVASARQAASLIHRRGLAGGGDHHGPPKVNFWQDPLNPSK 60

Query: 61  WKGEHFVIVSLTGWGLVLYGAYEFFT---KGKKEEKVGDGKH 95
           WK EHFVIVSLTGWGL+ YG Y+FFT   K KKEEKVG+  H
Sbjct: 61  WKEEHFVIVSLTGWGLLFYGGYKFFTGDKKDKKEEKVGEKSH 102

BLAST of HG10011651 vs. ExPASy TrEMBL
Match: A0A6A6KAW4 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_009138 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.1e-31
Identity = 70/102 (68.63%), Postives = 78/102 (76.47%), Query Frame = 0

Query: 1   MAAWTAAARR-----TVPSRKSVSTAQIPSLTHRRGLAGGGDHHGPPKVNFWEDPFNPSR 60
           MAAWTAAAR+     T+ S +  S  Q  SL HRRGLAGGGDHHGPPKVNFW+DP NPS+
Sbjct: 1   MAAWTAAARQAANLTTLSSPRVASAPQAASLIHRRGLAGGGDHHGPPKVNFWQDPLNPSK 60

Query: 61  WKGEHFVIVSLTGWGLVLYGAYEFFT---KGKKEEKVGDGKH 95
           WK EHFVIVSLTGWGL+ YG Y+FFT   K KKEEKVG+  H
Sbjct: 61  WKEEHFVIVSLTGWGLLFYGGYKFFTGDKKDKKEEKVGEKSH 102

BLAST of HG10011651 vs. TAIR 10
Match: AT2G20820.1 (unknown protein; Has 44 Blast hits to 44 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-19
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 0

Query: 14 SRKSVSTAQIP---------SLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFVIV 73
          +R+++S AQIP         S+  RR LAG  DHHG  KV+FW+ P NP  WK EHFV++
Sbjct: 5  ARRAMSLAQIPSARISSGAASIGQRRCLAGAADHHGSTKVDFWKQPTNPGNWKEEHFVLI 64

Query: 74 SLTGWGLVLYGAYEFFTKGKKEEKV 90
          SL+GWGL+ Y  Y+  T GKKE  V
Sbjct: 65 SLSGWGLLFYSGYKLATGGKKETPV 89

BLAST of HG10011651 vs. TAIR 10
Match: AT2G20820.2 (unknown protein; Has 36 Blast hits to 36 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 2.5e-09
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0

Query: 14 SRKSVSTAQIP---------SLTHRRGLAGGGDHHGPPKVNFWEDPFNPSRWKGEHFV 63
          +R+++S AQIP         S+  RR LAG  DHHG  KV+FW+ P NP  WK EH++
Sbjct: 5  ARRAMSLAQIPSARISSGAASIGQRRCLAGAADHHGSTKVDFWKQPTNPGNWKEEHWI 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0046869.12.0e-3788.51hypothetical protein E6C27_scaffold230G00240 [Cucumis melo var. makuwa] >TYK0327... [more]
KAE8650170.12.2e-3686.21hypothetical protein Csa_010956 [Cucumis sativus][more]
KAF3962262.12.6e-3270.59hypothetical protein CMV_013205 [Castanea mollissima][more]
XP_015896402.11.7e-3170.59uncharacterized protein LOC107430112 isoform X2 [Ziziphus jujuba][more]
XP_024032987.13.7e-3168.63uncharacterized protein LOC21393485 [Morus notabilis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L3627.3e-4186.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099740 PE=4 SV=1[more]
A0A5A7U0559.8e-3888.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6P4AKA68.1e-3270.59uncharacterized protein LOC107430112 isoform X2 OS=Ziziphus jujuba OX=326968 GN=... [more]
A0A6A6KAX83.1e-3168.63Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_009174 PE=4 SV=1[more]
A0A6A6KAW43.1e-3168.63Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_009138 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G20820.11.2e-1950.59unknown protein; Has 44 Blast hits to 44 proteins in 13 species: Archae - 0; Bac... [more]
AT2G20820.22.5e-0946.55unknown protein; Has 36 Blast hits to 36 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26
NoneNo IPR availablePANTHERPTHR35292:SF6SUBFAMILY NOT NAMEDcoord: 1..88
NoneNo IPR availablePANTHERPTHR35292EXPRESSED PROTEINcoord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10011651.1HG10011651.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane