HG10011566 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10011566
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description2S sulfur-rich seed storage protein 2-like
LocationChr01: 7230512 .. 7230832 (+)
RNA-Seq ExpressionHG10011566
SyntenyHG10011566
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACAGATTAGGGGGGGCGAACGGCTCCGGCACTGCGAGCAGTTATTGAGTCGGCCCCGCCGCTTCCGGCAGCTGTTAGCAGCGGAGGAAGAGGAAGACGCCGTGGAGCATCTGGAGGAATGCTGCCAGCAGCTTAGAGGGATGGACGATGCGTGCCGGTGCGAGGGGCTTCGACAAATCGTGCAGCGCCGTCGGCAGCAAGGGCGGCTGCAGGGGATCGACGTCGGCCAAATGCTGGAAAGAGCCACCAACTTGCCGTCGGTCTGCCGGCTCAGCCGACGCCGCTGTGACCTCCGGTCGACCACCACTCCATGGTAG

mRNA sequence

ATGAGACAGATTAGGGGGGGCGAACGGCTCCGGCACTGCGAGCAGTTATTGAGTCGGCCCCGCCGCTTCCGGCAGCTGTTAGCAGCGGAGGAAGAGGAAGACGCCGTGGAGCATCTGGAGGAATGCTGCCAGCAGCTTAGAGGGATGGACGATGCGTGCCGGTGCGAGGGGCTTCGACAAATCGTGCAGCGCCGTCGGCAGCAAGGGCGGCTGCAGGGGATCGACGTCGGCCAAATGCTGGAAAGAGCCACCAACTTGCCGTCGGTCTGCCGGCTCAGCCGACGCCGCTGTGACCTCCGGTCGACCACCACTCCATGGTAG

Coding sequence (CDS)

ATGAGACAGATTAGGGGGGGCGAACGGCTCCGGCACTGCGAGCAGTTATTGAGTCGGCCCCGCCGCTTCCGGCAGCTGTTAGCAGCGGAGGAAGAGGAAGACGCCGTGGAGCATCTGGAGGAATGCTGCCAGCAGCTTAGAGGGATGGACGATGCGTGCCGGTGCGAGGGGCTTCGACAAATCGTGCAGCGCCGTCGGCAGCAAGGGCGGCTGCAGGGGATCGACGTCGGCCAAATGCTGGAAAGAGCCACCAACTTGCCGTCGGTCTGCCGGCTCAGCCGACGCCGCTGTGACCTCCGGTCGACCACCACTCCATGGTAG

Protein sequence

MRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLRSTTTPW
Homology
BLAST of HG10011566 vs. NCBI nr
Match: XP_008463441.1 (PREDICTED: 2S sulfur-rich seed storage protein 2-like [Cucumis melo])

HSP 1 Score: 194.9 bits (494), Expect = 3.5e-46
Identity = 96/102 (94.12%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 2   RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 61
           +QIRGGERLRHCE+LL+RPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI
Sbjct: 75  QQIRGGERLRHCERLLTRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 134

Query: 62  VQRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLRSTT 104
           +QRRRQQG+LQG+DVGQMLERATNLPSVCRLSRRRCDLRSTT
Sbjct: 135 IQRRRQQGQLQGMDVGQMLERATNLPSVCRLSRRRCDLRSTT 176

BLAST of HG10011566 vs. NCBI nr
Match: XP_031738807.1 (2S sulfur-rich seed storage protein 2-like [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 3.3e-44
Identity = 93/102 (91.18%), Postives = 100/102 (98.04%), Query Frame = 0

Query: 2   RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 61
           +QIR GERLRHCE+LL++PRRFR LLAAEEEEDAVEHLEECCQQL+GMDDACRCEGLRQI
Sbjct: 42  QQIRSGERLRHCERLLTQPRRFRLLLAAEEEEDAVEHLEECCQQLKGMDDACRCEGLRQI 101

Query: 62  VQRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLRSTT 104
           VQRRRQQG+LQG+DVGQMLERATNLPSVCRLSRRRCDLRSTT
Sbjct: 102 VQRRRQQGQLQGVDVGQMLERATNLPSVCRLSRRRCDLRSTT 143

BLAST of HG10011566 vs. NCBI nr
Match: KAE8650140.1 (hypothetical protein Csa_011445, partial [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 9.6e-44
Identity = 92/100 (92.00%), Postives = 98/100 (98.00%), Query Frame = 0

Query: 4   IRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQ 63
           IR GERLRHCE+LL++PRRFR LLAAEEEEDAVEHLEECCQQL+GMDDACRCEGLRQIVQ
Sbjct: 1   IRSGERLRHCERLLTQPRRFRLLLAAEEEEDAVEHLEECCQQLKGMDDACRCEGLRQIVQ 60

Query: 64  RRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLRSTT 104
           RRRQQG+LQG+DVGQMLERATNLPSVCRLSRRRCDLRSTT
Sbjct: 61  RRRQQGQLQGVDVGQMLERATNLPSVCRLSRRRCDLRSTT 100

BLAST of HG10011566 vs. NCBI nr
Match: XP_022984798.1 (2S sulfur-rich seed storage protein 2-like [Cucurbita maxima])

HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41
Identity = 91/101 (90.10%), Postives = 95/101 (94.06%), Query Frame = 0

Query: 2   RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 61
           RQ   GERLRHCEQLL RPRR RQLL AEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI
Sbjct: 37  RQQVRGERLRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 96

Query: 62  VQRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLRST 103
           VQRRRQQGR+QGIDVGQMLERATNLPSVCRLS+RRC+LRS+
Sbjct: 97  VQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCELRSS 137

BLAST of HG10011566 vs. NCBI nr
Match: XP_022942616.1 (2S sulfur-rich seed storage protein 2-like [Cucurbita moschata])

HSP 1 Score: 178.7 bits (452), Expect = 2.6e-41
Identity = 90/101 (89.11%), Postives = 95/101 (94.06%), Query Frame = 0

Query: 2   RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 61
           RQ   GERLRHCEQLL RPRR RQLL AEEEEDAVEHLE+CCQQLRGMDDACRCEGLRQI
Sbjct: 37  RQQVRGERLRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQI 96

Query: 62  VQRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLRST 103
           VQRRRQQGR+QGIDVGQMLERATNLPSVCRLS+RRC+LRS+
Sbjct: 97  VQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCELRSS 137

BLAST of HG10011566 vs. ExPASy Swiss-Prot
Match: P93198 (2S albumin seed storage protein (Fragment) OS=Juglans regia OX=51240 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.7e-14
Identity = 38/98 (38.78%), Postives = 65/98 (66.33%), Query Frame = 0

Query: 3   QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIV 62
           QI+  + L HC+  L +  R        +E++  +H  +CCQQL  MD+ C+CEGLRQ+V
Sbjct: 42  QIQRQQNLNHCQYYLRQQSR----SGGYDEDNQRQHFRQCCQQLSQMDEQCQCEGLRQVV 101

Query: 63  QRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLR 101
           +R++QQ  L+G ++ +M++ A +LP+ C +S +RC++R
Sbjct: 102 RRQQQQQGLRGEEMEEMVQSARDLPNECGISSQRCEIR 135

BLAST of HG10011566 vs. ExPASy Swiss-Prot
Match: P0C8Y8 (2S sulfur-rich seed storage protein 2 OS=Bertholletia excelsa OX=3645 GN=BE2S2 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.0e-11
Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = 0

Query: 3   QIRGGERLRHC-----EQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEG 62
           Q+   ++L HC     +Q+   P +  + L   EE     HL+ECC+QL  MD+ CRCEG
Sbjct: 50  QMERQQQLNHCRMYLRQQMEESPYQNPRPLRRGEE----PHLDECCEQLERMDEMCRCEG 109

Query: 63  LRQIVQRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLRSTT 104
           LR +++R+R++  LQG  + +++ +A NL S C LS +RC +   T
Sbjct: 110 LRMMLRRQREEMELQGEQMQRIMRKAENLLSRCNLSPQRCPMGGYT 151

BLAST of HG10011566 vs. ExPASy Swiss-Prot
Match: P01089 (2S albumin OS=Ricinus communis OX=3988 PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-09
Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 0

Query: 3   QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIV 62
           QI+  + LR C++ + +    +    ++ +E     L  CC  L+ M   CRCEGLRQ +
Sbjct: 165 QIQEQQNLRQCQEYIKQQVSGQGPRRSDNQE---RSLRGCCDHLKQMQSQCRCEGLRQAI 224

Query: 63  QRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRC 98
           ++++ QG+LQG DV +    A NLPS+C +S   C
Sbjct: 225 EQQQSQGQLQGQDVFEAFRTAANLPSMCGVSPTEC 256

BLAST of HG10011566 vs. ExPASy Swiss-Prot
Match: P04403 (2S sulfur-rich seed storage protein 1 OS=Bertholletia excelsa OX=3645 GN=BE2S1 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 8.0e-09
Identity = 34/98 (34.69%), Postives = 55/98 (56.12%), Query Frame = 0

Query: 3   QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIV 62
           Q++  + L HC ++  R +                H+ ECC+QL GMD++CRCEGLR ++
Sbjct: 43  QMQRQQMLSHC-RMYMRQQMEESPYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMM 102

Query: 63  QRRRQQG-RLQGIDVGQMLERATNLPSVCRLSRRRCDL 100
            R +Q+  + +G  + +M+  A N+PS C LS  RC +
Sbjct: 103 MRMQQEEMQPRGEQMRRMMRLAENIPSRCNLSPMRCPM 139

BLAST of HG10011566 vs. ExPASy Swiss-Prot
Match: Q39649 (2S albumin OS=Cucurbita maxima OX=3661 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.0e-09
Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 0

Query: 2   RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVE--HLEECCQQLRGMDDACRCEGLR 61
           RQ+   E LR CEQ L +  R    +   E     E    +ECC++L+ +D+ CRC+ L 
Sbjct: 44  RQMSAREELRSCEQYLRQQSRDVLQMRGIENPWRREGGSFDECCRELKNVDEECRCDMLE 103

Query: 62  QIVQRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCD 99
           +I +  ++Q R  G +  QML++A NLPS+C +  +RCD
Sbjct: 104 EIAREEQRQAR--GQEGRQMLQKARNLPSMCGIRPQRCD 140

BLAST of HG10011566 vs. ExPASy TrEMBL
Match: A0A1S3CJQ3 (2S sulfur-rich seed storage protein 2-like OS=Cucumis melo OX=3656 GN=LOC103501607 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.7e-46
Identity = 96/102 (94.12%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 2   RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 61
           +QIRGGERLRHCE+LL+RPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI
Sbjct: 75  QQIRGGERLRHCERLLTRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 134

Query: 62  VQRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLRSTT 104
           +QRRRQQG+LQG+DVGQMLERATNLPSVCRLSRRRCDLRSTT
Sbjct: 135 IQRRRQQGQLQGMDVGQMLERATNLPSVCRLSRRRCDLRSTT 176

BLAST of HG10011566 vs. ExPASy TrEMBL
Match: A0A0A0L7P7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G078820 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.6e-44
Identity = 93/102 (91.18%), Postives = 100/102 (98.04%), Query Frame = 0

Query: 2   RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 61
           +QIR GERLRHCE+LL++PRRFR LLAAEEEEDAVEHLEECCQQL+GMDDACRCEGLRQI
Sbjct: 42  QQIRSGERLRHCERLLTQPRRFRLLLAAEEEEDAVEHLEECCQQLKGMDDACRCEGLRQI 101

Query: 62  VQRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLRSTT 104
           VQRRRQQG+LQG+DVGQMLERATNLPSVCRLSRRRCDLRSTT
Sbjct: 102 VQRRRQQGQLQGVDVGQMLERATNLPSVCRLSRRRCDLRSTT 143

BLAST of HG10011566 vs. ExPASy TrEMBL
Match: A0A6J1JBK8 (2S sulfur-rich seed storage protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482974 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.7e-42
Identity = 91/101 (90.10%), Postives = 95/101 (94.06%), Query Frame = 0

Query: 2   RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 61
           RQ   GERLRHCEQLL RPRR RQLL AEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI
Sbjct: 37  RQQVRGERLRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 96

Query: 62  VQRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLRST 103
           VQRRRQQGR+QGIDVGQMLERATNLPSVCRLS+RRC+LRS+
Sbjct: 97  VQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCELRSS 137

BLAST of HG10011566 vs. ExPASy TrEMBL
Match: A0A6J1FPC9 (2S sulfur-rich seed storage protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111447600 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41
Identity = 90/101 (89.11%), Postives = 95/101 (94.06%), Query Frame = 0

Query: 2   RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI 61
           RQ   GERLRHCEQLL RPRR RQLL AEEEEDAVEHLE+CCQQLRGMDDACRCEGLRQI
Sbjct: 37  RQQVRGERLRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEQCCQQLRGMDDACRCEGLRQI 96

Query: 62  VQRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDLRST 103
           VQRRRQQGR+QGIDVGQMLERATNLPSVCRLS+RRC+LRS+
Sbjct: 97  VQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCELRSS 137

BLAST of HG10011566 vs. ExPASy TrEMBL
Match: A0A2I0JHZ1 (2S albumin-like OS=Punica granatum OX=22663 GN=LOC116213024 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.7e-14
Identity = 43/97 (44.33%), Postives = 70/97 (72.16%), Query Frame = 0

Query: 3   QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIV 62
           QI+  ++L HC+Q+L+R  R+  L     E+   E L++CCQQLR +++ CRC+G+ +IV
Sbjct: 51  QIQRQQQLFHCQQVLTRGGRYIVLGMRGAEDSNPESLQQCCQQLRQVEEQCRCQGIEEIV 110

Query: 63  QRRRQQGRLQGIDVGQMLERATNLPSVCRLSRRRCDL 100
           Q ++QQGRLQG  + ++++ A NLP++CRLS +RC +
Sbjct: 111 QIQQQQGRLQGQRLREVIQTAENLPNMCRLSPQRCSV 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008463441.13.5e-4694.12PREDICTED: 2S sulfur-rich seed storage protein 2-like [Cucumis melo][more]
XP_031738807.13.3e-4491.182S sulfur-rich seed storage protein 2-like [Cucumis sativus][more]
KAE8650140.19.6e-4492.00hypothetical protein Csa_011445, partial [Cucumis sativus][more]
XP_022984798.11.2e-4190.102S sulfur-rich seed storage protein 2-like [Cucurbita maxima][more]
XP_022942616.12.6e-4189.112S sulfur-rich seed storage protein 2-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
P931983.7e-1438.782S albumin seed storage protein (Fragment) OS=Juglans regia OX=51240 PE=1 SV=1[more]
P0C8Y85.0e-1137.742S sulfur-rich seed storage protein 2 OS=Bertholletia excelsa OX=3645 GN=BE2S2 P... [more]
P010891.6e-0935.792S albumin OS=Ricinus communis OX=3988 PE=1 SV=2[more]
P044038.0e-0934.692S sulfur-rich seed storage protein 1 OS=Bertholletia excelsa OX=3645 GN=BE2S1 P... [more]
Q396498.0e-0937.372S albumin OS=Cucurbita maxima OX=3661 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3CJQ31.7e-4694.122S sulfur-rich seed storage protein 2-like OS=Cucumis melo OX=3656 GN=LOC1035016... [more]
A0A0A0L7P71.6e-4491.18AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G078820 PE=3 SV... [more]
A0A6J1JBK85.7e-4290.102S sulfur-rich seed storage protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1FPC91.3e-4189.112S sulfur-rich seed storage protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A2I0JHZ11.7e-1444.332S albumin-like OS=Punica granatum OX=22663 GN=LOC116213024 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..49
NoneNo IPR availablePANTHERPTHR354962S SEED STORAGE PROTEIN 1-RELATEDcoord: 3..103
NoneNo IPR availablePANTHERPTHR35496:SF15SWEET PROTEIN MABINLIN-1 CHAIN Acoord: 3..103
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 13..97
e-value: 1.7E-7
score: 40.9
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF00234Tryp_alpha_amylcoord: 13..94
e-value: 2.4E-10
score: 40.7
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 1..104
e-value: 2.0E-20
score: 75.2
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 8..99
IPR044723AAI/SS protein, conserved domainCDDcd00261AAI_SScoord: 5..93
e-value: 1.3041E-5
score: 38.9231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10011566.1HG10011566.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0045735 nutrient reservoir activity