HG10011548 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10011548
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein of unknown function (DUF3511)
LocationChr01: 7082657 .. 7082986 (-)
RNA-Seq ExpressionHG10011548
SyntenyHG10011548
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGAAAACAAGATGTACTTAAATCAGTCGCAAAAACGAGCTATTGTTGACCCATCATTTGTGAAACGACATGTGACCAAGACACCAGAATCGTCAAAAAATTCGACAAAGAAGTCGTGGTGGAAGAAACCAGAATTGAAGAGACGACGACGTGTTGCAAAGTACAAATTGTATGCAGTTGAAGGGAAGGTTAAGAATTCCATAAAGAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA

mRNA sequence

ATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGAAAACAAGATGTACTTAAATCAGTCGCAAAAACGAGCTATTGTTGACCCATCATTTGTGAAACGACATGTGACCAAGACACCAGAATCGTCAAAAAATTCGACAAAGAAGTCGTGGTGGAAGAAACCAGAATTGAAGAGACGACGACGTGTTGCAAAGTACAAATTGTATGCAGTTGAAGGGAAGGTTAAGAATTCCATAAAGAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA

Coding sequence (CDS)

ATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGAAAACAAGATGTACTTAAATCAGTCGCAAAAACGAGCTATTGTTGACCCATCATTTGTGAAACGACATGTGACCAAGACACCAGAATCGTCAAAAAATTCGACAAAGAAGTCGTGGTGGAAGAAACCAGAATTGAAGAGACGACGACGTGTTGCAAAGTACAAATTGTATGCAGTTGAAGGGAAGGTTAAGAATTCCATAAAGAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA

Protein sequence

MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVTKTPESSKNSTKKSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF
Homology
BLAST of HG10011548 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_009524 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 2.2e-43
Identity = 90/109 (82.57%), Postives = 99/109 (90.83%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVTKTPESSKNSTK 60
           MEGLHHHPNKGGRSLEVIDVRKLS NK+YLNQSQ+R +VDPSFVK++VTKT E SK+  K
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  KSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF 110
           K WWKKPE++RR+RVAKYKLY VEGKVK SIKKGIRW KTKCSRIISGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of HG10011548 vs. NCBI nr
Match: KAA0033960.1 (DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 184.5 bits (467), Expect = 4.9e-43
Identity = 93/109 (85.32%), Postives = 100/109 (91.74%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVTKTPESSKNSTK 60
           MEGLHHH NKGGRSLEV+DVRKLSENKMYLNQSQ+R +VDPSFVKR+VTKT E SK   K
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSK--MK 60

Query: 61  KSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF 110
           KSWWKKPE+KRR+RVAKYKLYAVEGKVK+SIKKG RW KTKCSRIISGF
Sbjct: 61  KSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

BLAST of HG10011548 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia])

HSP 1 Score: 157.9 bits (398), Expect = 4.9e-35
Identity = 79/110 (71.82%), Postives = 89/110 (80.91%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPS-FVKRHVTKTPESSKNST 60
           MEG+H  P KGGRSLE+IDVR LSENK+ L+QS+ RA VDPS   KR   K P  S  S+
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 60

Query: 61  KKSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF 110
            KSWWK PE+KRRRRVAKYKLY VEGKVKNSIKKGI+WFKT+CSRI+SGF
Sbjct: 61  VKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

BLAST of HG10011548 vs. NCBI nr
Match: KAG6600771.1 (hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149.8 bits (377), Expect = 1.3e-32
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 0

Query: 2   EGLHHHP-NKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVTKTPESSKNSTK 61
           EG+HHHP N    SLE +D  KLS+N MYLNQ QKR I+  SFVKRH+ KT ESSK ST 
Sbjct: 5   EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIISSSFVKRHIIKTSESSKRST- 64

Query: 62  KSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF 110
           +SWWK P++KRRRRVAKY+ Y VEGKVK+SIKKGI+W KTKCSRII GF
Sbjct: 65  RSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112

BLAST of HG10011548 vs. NCBI nr
Match: KAG7017168.1 (hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.9 bits (372), Expect = 5.1e-32
Identity = 73/110 (66.36%), Postives = 92/110 (83.64%), Query Frame = 0

Query: 1   MEGLHHHPNK-GGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVTKTPESSKNST 60
           MEG+H  P+K GGRSLEVIDVRKLSEN+++L+QS++ A +DPS VK  V KT E S+  +
Sbjct: 1   MEGVHRRPSKGGGRSLEVIDVRKLSENQVHLSQSRRPAAMDPSAVKPRVVKTGEGSRGGS 60

Query: 61  KKSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF 110
             SWWK PE+KR+RRVAKYKLY VEG+VK+SIKKG+RWFK++CSRI+ GF
Sbjct: 61  GNSWWKNPEMKRQRRVAKYKLYTVEGRVKDSIKKGMRWFKSRCSRIVYGF 110

BLAST of HG10011548 vs. ExPASy TrEMBL
Match: A0A0A0L7N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 90/109 (82.57%), Postives = 99/109 (90.83%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVTKTPESSKNSTK 60
           MEGLHHHPNKGGRSLEVIDVRKLS NK+YLNQSQ+R +VDPSFVK++VTKT E SK+  K
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  KSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF 110
           K WWKKPE++RR+RVAKYKLY VEGKVK SIKKGIRW KTKCSRIISGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of HG10011548 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.4e-43
Identity = 93/109 (85.32%), Postives = 100/109 (91.74%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVTKTPESSKNSTK 60
           MEGLHHH NKGGRSLEV+DVRKLSENKMYLNQSQ+R +VDPSFVKR+VTKT E SK   K
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSK--MK 60

Query: 61  KSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF 110
           KSWWKKPE+KRR+RVAKYKLYAVEGKVK+SIKKG RW KTKCSRIISGF
Sbjct: 61  KSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

BLAST of HG10011548 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.4e-35
Identity = 79/110 (71.82%), Postives = 89/110 (80.91%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPS-FVKRHVTKTPESSKNST 60
           MEG+H  P KGGRSLE+IDVR LSENK+ L+QS+ RA VDPS   KR   K P  S  S+
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 60

Query: 61  KKSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF 110
            KSWWK PE+KRRRRVAKYKLY VEGKVKNSIKKGI+WFKT+CSRI+SGF
Sbjct: 61  VKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

BLAST of HG10011548 vs. ExPASy TrEMBL
Match: A0A5D3BBI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00320 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.3e-32
Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVK-RHVTKTPESSKNST 60
           ME +H  PNKG R+L++IDVRKLSENKM+LNQS++ + +DPS +K R +  T ESSK ST
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  KKSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF 110
            K WWK  E+KRRRRVAKYKLY VEG+VK SI+KGI WFK +C+RIISGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

BLAST of HG10011548 vs. ExPASy TrEMBL
Match: A0A0A0LL30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 7.4e-29
Identity = 73/110 (66.36%), Postives = 88/110 (80.00%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVTKT-PESSKNST 60
           MEG+H  PNKG R+L +IDVRKLSENK++LNQS +++ ++PS VK    KT  ESSK S 
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 61  KKSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF 110
            KSW KK E+KRRRRVAKYKLY VEGKVK+SI+KGI WFK K +RI+SGF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

BLAST of HG10011548 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 68.2 bits (165), Expect = 4.8e-12
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 54  SSKNSTKKSWWKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISG 109
           SS ++  K WW  PE+KR+RRVAKYKLY+ EGK+K +++K  +W K +CS+II G
Sbjct: 69  SSHSTLFKGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

BLAST of HG10011548 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08
Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 0

Query: 68  ELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISGF 110
           E+KR++R+A+YK Y VEGKVK+++K G RW K KC +I+  F
Sbjct: 69  EMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

BLAST of HG10011548 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 52.8 bits (125), Expect = 2.1e-07
Identity = 22/59 (37.29%), Postives = 41/59 (69.49%), Query Frame = 0

Query: 50  KTPESSKNSTKKSW-WKKPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIIS 108
           + P+  ++S+  SW +  P+L+R++RV  Y+ Y VEGK+K S +K  +W K KC+++++
Sbjct: 58  QNPKKGRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

BLAST of HG10011548 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 51.6 bits (122), Expect = 4.6e-07
Identity = 39/114 (34.21%), Postives = 53/114 (46.49%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMY----LNQSQKRAIVDPSFVKRHVTKTPESSK 60
           M+G   HP    R+L V     +   K Y      Q        P F          +SK
Sbjct: 1   MDGFGSHP----RTLAVDQWMDIVNGKGYGVGGTTQVYSTRPDSPKFQPSIPPPPGSTSK 60

Query: 61  NSTKKSWWK--KPELKRRRRVAKYKLYAVEGKVKNSIKKGIRWFKTKCSRIISG 109
             T  + W+    E KR++R+A YK YA+EGKVK+++KKG  W K + S II G
Sbjct: 61  TRTTATPWRLIDAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

BLAST of HG10011548 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 51.2 bits (121), Expect = 6.0e-07
Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 0

Query: 33  SQKRAIVDPSFVKRHVTKTPESSKNSTKKSWWK---KPELKRRRRVAKYKLYAVEGKVKN 92
           S   A  +P+ V R  +       N  KK  +K   + E++R++RVA Y +Y VEG+VK 
Sbjct: 48  STYNAYQNPTIV-RDDSNNKSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEGRVKG 107

Query: 93  SIKKGIRWFKTKCSRIISG 109
           S+KK  +WFK  CS  + G
Sbjct: 108 SMKKSFKWFKETCSNAVYG 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN56136.12.2e-4382.57hypothetical protein Csa_009524 [Cucumis sativus][more]
KAA0033960.14.9e-4385.32DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain pro... [more]
XP_022151002.14.9e-3571.82uncharacterized protein LOC111019023 [Momordica charantia][more]
KAG6600771.11.3e-3269.72hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7017168.15.1e-3266.36hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L7N51.1e-4382.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1[more]
A0A5D3BTT82.4e-4385.32DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9... [more]
A0A6J1DCB32.4e-3571.82uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A5D3BBI79.3e-3266.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LL307.4e-2966.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G05725.14.8e-1254.55Protein of unknown function (DUF3511) [more]
AT2G47480.11.1e-0854.76Protein of unknown function (DUF3511) [more]
AT2G19460.12.1e-0737.29Protein of unknown function (DUF3511) [more]
AT3G62640.14.6e-0734.21Protein of unknown function (DUF3511) [more]
AT1G72720.16.0e-0737.97Protein of unknown function (DUF3511) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 64..108
e-value: 7.2E-23
score: 80.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..66
NoneNo IPR availablePANTHERPTHR33193:SF13DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 9..109
NoneNo IPR availablePANTHERPTHR33193DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 9..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10011548.1HG10011548.1mRNA