HG10011390 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011390
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ras-related protein Rab-2A
Location	Chr01: 5551291 .. 5555053 (-)
RNA-Seq Expression	HG10011390
Synteny	HG10011390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTACGATTATCTATTCAAGTACATCATCATCGGGGATACAGGTTTGCTTAGAATCTTTGTTTTGATTGTTTTTTCTTCTGGGTTTCTTTTGAAATTGGGGTTTTTGTGTGGGTTACAGGTGTGGGCAAATCTTGCTTGCTATTGCAGTTCACGGACAAGAGGTTTCAGCCTGTGCACGATCTCACTATTGGCGTTGAGTTTGGTGCTCGTATGGTCACCATCGATGGCCGACCTATTAAGCTTCAGATATGGGATACTGTGAGTTTCACTTCTTATTCCGTTTGCCTTTGCAGATTTTAATTTCTTTATATATATATATATATATATATATATATAAGTGGCAATATAGAATATGAGAAAGTAACAAGAACTGGAAGATTCTATAAATGATGGACAATTTCAGATGAATATTGGCTTGGTAAGTTTTTGTCCTCACCTATGGGACTTCTGAGATCAATCTTTTGGATGCGAGAACTTTACCCTCTGGTTTCGTAGATAGAATCAGTGATGTGTGTGTGGTACCAAGAACTTTCAAGTGATCCTAAGAAATCCCTTTAGAAACTCAGTCGTATTCGTCCATGATCTTTTATTGATGGGTCATGTGTTTAGATCATGTTTTGTGGGAATGTTAGTTTTCTAAGGCTATTAGGGACACATTTTTGGAGGCTTTAGGTGGCCAGCCAGATAGCTTGTAACAGATTGTGCAGGGCTATGGTAGAGGAGGTAAATATCATCCTCCTTTTGAGATTGATTGATGGCTTTTTGGCACTCTGCTTTCTTCGCAGTTTTATGGAATATTGACTTGCGAGGGATAGGAGGGGTTTTAGAGATGTGTAGAGCTTTTGGAGGAGATTTGGGCCTTGGCTTGGTTCAATGCCTCCCTTGTGTATCATTTCATGACCTCTCAAATGGATTATGAAGTATTTGAGAATATTTCTTGTTATCCTCTGGTCTATGCCAGCCTTTATTGGTTATGAATCGTGGGGGACAAGTTACCTTTCCACTCATCTATAATATAAGGGCAAGAAAGAAAAAGATGACCAACAGATTGGATTGTTGTGCACCGTTCCCAGTATCGGAGGAGATAACTTTTTGTTGATATGCATGCGCTGAAAATGAAGACAGAGACCAAACAGAATGCCTTAGATTTATTTCTATATGTGTTGTGTGGTGGTTGGGCCTACCCACCCTATTTGTTCCATGATCTATTATCGGTCTATTGATACTGGCCACTTTGATAAATTGTCCCTGATTTTGACCAGATTCAAAATAAATGGGGGCCCATTCTTAGTCTTCCAATGAACTCTACAAACAGCCAGATTCTCAAAAGCATGCTCCCTTGGCACAAACATGTTAATGAGGGATTTGGCCATGATAGAACCCAAGATGTTCAGAATCTTGATTATTAGAGGGGTGGAAGCACTTTATTTTCTGGCTAAGAATAGCCCATTTATAAGACTCCTTATACCGGAGATCTTCTAAACTATGGCATTTTTCTGATTCACCTTTTTATTATTATTTATTATTATTATTATTATTATTATTATTTTATATCCGCGAGTATTCGGGCAAATTTACGTATAACTCGACTAATCTCATGGGACAACTATGTTCCTCTCAATTAATCAACTGGAATTTTTATAATGTCTTATAATTTTTTTCTAGAAGTTTTTTTCTCTCTCCTTATTTTCTTATTTTGAGTACAACAATTGCGGGGTGTGGAATCAAACCCCACCTCAAGGAAGGGAGTAAATGTCAATTACCATTCAGTTAAAACTCGCTTTTCTTATTAGAATTTATTCTCGTGGATCACATATTTTCATTCTTAGAATGCTGAGTTTCCTTAGAAGTCAATGGTTCTATGAATGGAAATTTCAATGTTACAATGATGTTTACTTTCACAACTTATCTAATTAAAGTTCTTCAAAATAATCTTAAAGATAAAAATGGCAAGCTATTTGCATCTGTTTGGAAGCTCTTTAGAAAATAACCTTTGACTTTTGCTTTTAAAACAATTTTCAAGAACTGACATTGTGTAATTCATGAGAATGAAAGTTGTACTCTTGAAATCATTATTCAGTAGCCATGATCAAACAATTATCCAAATGTAAATTTCCATGAATTTTTGTTTTAGAAAAATGCAATATTTTTTTTTCAAAACAGCTGTCAAATAGTTCTTTATGTTTGCTAAACATCAGACAGTAGATTCTTTACTGGTAATGGTGTAAATAGATGATGTTTCCCCTCGTAGAAAATTCCTTTTCCTTTTGGGTAGATAAGGAAGGGACATTTTACTTTATTGCAGGCTGGGCAAGAATCATTCAGATCAATTACAAGATCTTACTACAGAGGGGCAGCTGGTGCTCTTTTAGTTTATGACATTACCAGGTGAGTCTGATGGATGGATGGATGGATGAGATTAACTTTTCTTATCGTCTCAAAACTGTCTCTTCTTTCTAATTGTTAGCTATATTTCATTGCATTGAACTTAGGGATGTTTGCTTTTCTACCTTCAGAGTTCGTAACTGTTAAGCTAGTTTTCTTATGATTGACCAATTTGTATTTACTATGTGGCTTCTCTTGGTAAAGATCGACAACCAATCTTCACTAATATCCCCTTGCAGTTGCAGTTGAATTTGATTTTTTTTTTTCTTGTTTTGAGAAATCTAAGATCATCTCATGATTTTGTTATCAGGAGGGAAACTTTCAATCACTTGGCGAGCTGGTTGGAAGATGCTCGGCAGCATGCAAATCCCAACATGTCGATTATGCTTGTAGGAAACAAGGCTGATCTCGCTCATCGAAGAGCTGTAAGCAAGGAAGAGGGAGAACAATTTGCAAAAGAAAATGGACTCTTATTCTTAGAGGCTTCTGCTAGAACAGCACAAAATGTTGAGGAGGTCAATTTTGTTTTATATGATATGTGCTTCTTCTAAAAATGTAGACTGTGTTGTACATCATCTTGATGTTTGATTTTACAGGCATTCATAAAGACTGCAGCTAAAATACTTCAAAATATTCAAGAAGGTGTCTTTGATGTATCCAATGAGGTAAATTGGGTCTATCTTTTGTGGTAAAAATGTAAATTATTGATTGTGAATGTTACCTACCCACTCTGCACTGTGATATTACTTATTTGACAATTATCTGACATTATGGGCATTCATACGACTGCAGTAGGTCGTAGTACAAACTAGTGGCACTGGGACGTGTAAAAATTAGCAAAGGGCCATAGTAGCGATTTGTCTAGACTATTAAAATTATAGGAGTCTTATGATAACCAATATTGTAGCATTAGATTCTTATCTCATGAGATTAGTTAAAGTTGTGCATAAGTTAGTGTGAACACCTATGAATATAAAAAAAAGGTTAGGCATTTGTGGGACAACATTTTCATTCTTTGCTGTTATTTTTTAGGGTTGTGGTTAGAGAGAAATATAAGAGTTTTTAAGAGCTTGAGAGATCTTGGGAGGAAATGTGGTCTCTGATTATGTTTAACGCTTTGTTGGCTGTTCTATATTCTTTCATTGAGAATATCAATTTCCATTTTTTCCTGAGCTTAAACTACTGTTAGCATAGTTTCTGTTTTAAGAACATGTTGCATTGCAACCATGAAGAACAGAAATTGAGTTTTACGAGACAACTGTTTTGATTGAATATTGCAGTCATCTGGGATCAAGGTCGGTTACAGGCGTCCTCAAGGGCCATCGGGGGCGAGAGATGGAACAGTTGCACAGCGAGGTGGATGCTGTGGCTAA

mRNA sequence

ATGTCGTACGATTATCTATTCAAGTACATCATCATCGGGGATACAGGTGTGGGCAAATCTTGCTTGCTATTGCAGTTCACGGACAAGAGGTTTCAGCCTGTGCACGATCTCACTATTGGCGTTGAGTTTGGTGCTCGTATGGTCACCATCGATGGCCGACCTATTAAGCTTCAGATATGGGATACTGCTGGGCAAGAATCATTCAGATCAATTACAAGATCTTACTACAGAGGGGCAGCTGGTGCTCTTTTAGTTTATGACATTACCAGGAGGGAAACTTTCAATCACTTGGCGAGCTGGTTGGAAGATGCTCGGCAGCATGCAAATCCCAACATGTCGATTATGCTTGTAGGAAACAAGGCTGATCTCGCTCATCGAAGAGCTGTAAGCAAGGAAGAGGGAGAACAATTTGCAAAAGAAAATGGACTCTTATTCTTAGAGGCTTCTGCTAGAACAGCACAAAATGTTGAGGAGGCATTCATAAAGACTGCAGCTAAAATACTTCAAAATATTCAAGAAGGTGTCTTTGATGTATCCAATGAGTCATCTGGGATCAAGGTCGGTTACAGGCGTCCTCAAGGGCCATCGGGGGCGAGAGATGGAACAGTTGCACAGCGAGGTGGATGCTGTGGCTAA

Coding sequence (CDS)

ATGTCGTACGATTATCTATTCAAGTACATCATCATCGGGGATACAGGTGTGGGCAAATCTTGCTTGCTATTGCAGTTCACGGACAAGAGGTTTCAGCCTGTGCACGATCTCACTATTGGCGTTGAGTTTGGTGCTCGTATGGTCACCATCGATGGCCGACCTATTAAGCTTCAGATATGGGATACTGCTGGGCAAGAATCATTCAGATCAATTACAAGATCTTACTACAGAGGGGCAGCTGGTGCTCTTTTAGTTTATGACATTACCAGGAGGGAAACTTTCAATCACTTGGCGAGCTGGTTGGAAGATGCTCGGCAGCATGCAAATCCCAACATGTCGATTATGCTTGTAGGAAACAAGGCTGATCTCGCTCATCGAAGAGCTGTAAGCAAGGAAGAGGGAGAACAATTTGCAAAAGAAAATGGACTCTTATTCTTAGAGGCTTCTGCTAGAACAGCACAAAATGTTGAGGAGGCATTCATAAAGACTGCAGCTAAAATACTTCAAAATATTCAAGAAGGTGTCTTTGATGTATCCAATGAGTCATCTGGGATCAAGGTCGGTTACAGGCGTCCTCAAGGGCCATCGGGGGCGAGAGATGGAACAGTTGCACAGCGAGGTGGATGCTGTGGCTAA

Protein sequence

MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGIKVGYRRPQGPSGARDGTVAQRGGCCG

Homology

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BLAST of HG10011390 vs. NCBI nr
Match: XP_038894253.1 (ras-related protein RABB1b [Benincasa hispida])

HSP 1 Score: 421.8 bits (1083), Expect = 3.5e-114
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
           ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGY RPQGPSGARDGTVAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 211

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BLAST of HG10011390 vs. NCBI nr
Match: XP_008450002.1 (PREDICTED: ras-related protein RABB1b [Cucumis melo] >KAA0037848.1 ras-related protein RABB1b [Cucumis melo var. makuwa] >TYK27226.1 ras-related protein RABB1b [Cucumis melo var. makuwa])

HSP 1 Score: 419.9 bits (1078), Expect = 1.3e-113
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
           ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGY RPQGPSGARDG VAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGAVAQRGGCCG 211

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BLAST of HG10011390 vs. NCBI nr
Match: XP_022989237.1 (ras-related protein RABB1b [Cucurbita maxima])

HSP 1 Score: 419.9 bits (1078), Expect = 1.3e-113
Identity = 208/210 (99.05%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
           ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCC 211
           ESSGIKVGY RPQGPSGARDGTVAQRGGCC
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCC 210

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BLAST of HG10011390 vs. NCBI nr
Match: XP_004145694.1 (ras-related protein RABB1b [Cucumis sativus] >KAE8650793.1 hypothetical protein Csa_017617 [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
           ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGY RPQGPSGARDGTVAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 211

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BLAST of HG10011390 vs. NCBI nr
Match: XP_023531811.1 (ras-related protein RABB1b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418.7 bits (1075), Expect = 3.0e-113
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
           ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCC 211
           ESSGIKVGY RPQGPSG+RDGTVAQRGGCC
Sbjct: 181 ESSGIKVGYGRPQGPSGSRDGTVAQRGGCC 210

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BLAST of HG10011390 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 3.2e-110
Identity = 194/211 (91.94%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
            DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQ+GVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCCG 212
           ESSGIK+GY R QG +G RDGT++Q GGCCG
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

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BLAST of HG10011390 vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.5e-102
Identity = 183/211 (86.73%), Postives = 195/211 (92.42%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
            DLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCCG 212
           ES GIKVGY    GPSG RDG+ +Q GGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

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BLAST of HG10011390 vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.4e-97
Identity = 177/210 (84.29%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
            DL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA  I + IQ+GVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCC 211
           ES GIKVGY  P G SG    + +Q GGCC
Sbjct: 181 ESYGIKVGYAIP-GQSGGAGSSSSQGGGCC 209

[Close]

BLAST of HG10011390 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 354.8 bits (909), Expect = 6.9e-97
Identity = 177/210 (84.29%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
            DL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA  I + IQ+GVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCC 211
           ES GIKVGY  P    GA  G+ +Q GGCC
Sbjct: 181 ESYGIKVGYVVPGQSGGA--GSSSQGGGCC 208

[Close]

BLAST of HG10011390 vs. ExPASy Swiss-Prot
Match: P36863 (GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.6e-93
Identity = 172/213 (80.75%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNM+IML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
            DL HRRAV+ EEGEQFAKE+GL+FLE SARTA NVEEAFI TA +I + IQ+GVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 ESSGIKVGYRRPQ-GPSGAR--DGTVAQRGGCC 211
           ES GIKVGY     GP  A+  +G   +   CC
Sbjct: 181 ESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213

[Close]

BLAST of HG10011390 vs. ExPASy TrEMBL
Match: A0A5A7T4U5 (Ras-related protein RABB1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001040 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.5e-114
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
           ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGY RPQGPSGARDG VAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGAVAQRGGCCG 211

[Close]

BLAST of HG10011390 vs. ExPASy TrEMBL
Match: A0A6J1JF93 (ras-related protein RABB1b OS=Cucurbita maxima OX=3661 GN=LOC111486377 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.5e-114
Identity = 208/210 (99.05%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
           ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCC 211
           ESSGIKVGY RPQGPSGARDGTVAQRGGCC
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCC 210

[Close]

BLAST of HG10011390 vs. ExPASy TrEMBL
Match: A0A1S3BMP4 (ras-related protein RABB1b OS=Cucumis melo OX=3656 GN=LOC103491719 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.5e-114
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
           ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGY RPQGPSGARDG VAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGAVAQRGGCCG 211

[Close]

BLAST of HG10011390 vs. ExPASy TrEMBL
Match: A0A0A0LC04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597310 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.5e-114
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIW
Sbjct: 53  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIW 112

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 113 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 172

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
           ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN
Sbjct: 173 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 232

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGY RPQGPSGARDGTVAQRGGCCG
Sbjct: 233 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 263

[Close]

BLAST of HG10011390 vs. ExPASy TrEMBL
Match: A0A6J1EQZ0 (ras-related protein RABB1b OS=Cucurbita moschata OX=3662 GN=LOC111435082 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113
Identity = 207/210 (98.57%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
           ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCC 211
           ESSGIKVGY RPQGPSGARDG VAQRGGCC
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGAVAQRGGCC 210

[Close]

BLAST of HG10011390 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 399.1 bits (1024), Expect = 2.3e-111
Identity = 194/211 (91.94%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
            DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQ+GVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCCG 212
           ESSGIK+GY R QG +G RDGT++Q GGCCG
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

[Close]

BLAST of HG10011390 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 372.9 bits (956), Expect = 1.8e-103
Identity = 183/211 (86.73%), Postives = 195/211 (92.42%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
            DLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVAQRGGCCG 212
           ES GIKVGY    GPSG RDG+ +Q GGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of HG10011390 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 303.9 bits (777), Expect = 1.0e-82
Identity = 153/212 (72.17%), Postives = 176/212 (83.02%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY Y FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ +TID +PIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQHA+ NM+ ML+GNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
            DL  +R VS EEGEQFA+E+GL+F+EASA+TA NVEEAF++TAA I + IQ+GV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 181 ESSGIKVGYRRPQGPSGARDGTVA-QRGGCCG 212
           E  GI        GP G +D + + QR GCCG
Sbjct: 181 E-PGI------TPGPFGGKDASSSQQRRGCCG 205

[Close]

BLAST of HG10011390 vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-82
Identity = 148/165 (89.70%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 47  MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
           MVT+DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 107 HANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAK 166
           HANPNMSIML+GNK DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAK
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 167 ILQNIQEGVFDVSNESSGIKVGYRRPQGPSGARDGTVAQRGGCCG 212
           ILQNIQ+GVFDVSNESSGIK+GY R QG +G RDGT++Q GGCCG
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 165

[Close]

BLAST of HG10011390 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-50
Identity = 96/208 (46.15%), Postives = 135/208 (64.90%), Query Frame = 0


Query: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
           YDYLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D + IK QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKAD 122
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++ +WL++ R H +PN+ +MLVGNK+D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129

Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNES 182
           L H  AV  E+ + FA++  L F+E SA  A NVE AF +   +I   + +   + ++ES
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189

Query: 183 SGIKVGYRRPQGPSGARDGTVAQRGGCC 211
           + +     +       +D +  ++GGCC
Sbjct: 190 ANVP---SKGDKIDIGKDVSAVKKGGCC 214

The following BLAST results are available for this feature:

BLAST of HG10011390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894253.1	3.5e-114	99.53	ras-related protein RABB1b [Benincasa hispida]	[more]
XP_008450002.1	1.3e-113	99.05	PREDICTED: ras-related protein RABB1b [Cucumis melo] >KAA0037848.1 ras-related p...	[more]
XP_022989237.1	1.3e-113	99.05	ras-related protein RABB1b [Cucurbita maxima]	[more]
XP_004145694.1	1.8e-113	99.05	ras-related protein RABB1b [Cucumis sativus] >KAE8650793.1 hypothetical protein ...	[more]
XP_023531811.1	3.0e-113	98.57	ras-related protein RABB1b [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10011390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38922	3.2e-110	91.94	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
P92963	2.5e-102	86.73	Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1	[more]
P49104	2.4e-97	84.29	Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1	[more]
P49103	6.9e-97	84.29	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]
P36863	1.6e-93	80.75	GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1	[more]

BLAST of HG10011390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T4U5	6.5e-114	99.05	Ras-related protein RABB1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1JF93	6.5e-114	99.05	ras-related protein RABB1b OS=Cucurbita maxima OX=3661 GN=LOC111486377 PE=4 SV=1	[more]
A0A1S3BMP4	6.5e-114	99.05	ras-related protein RABB1b OS=Cucumis melo OX=3656 GN=LOC103491719 PE=4 SV=1	[more]
A0A0A0LC04	8.5e-114	99.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597310 PE=4 SV=1	[more]
A0A6J1EQZ0	2.5e-113	98.57	ras-related protein RABB1b OS=Cucurbita moschata OX=3662 GN=LOC111435082 PE=4 SV...	[more]

BLAST of HG10011390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35860.1	2.3e-111	91.94	GTP-binding 2	[more]
AT4G17170.1	1.8e-103	86.73	RAB GTPase homolog B1C	[more]
AT4G17160.1	1.0e-82	72.17	RAB GTPase homolog B1A	[more]
AT4G35860.2	2.2e-82	89.70	GTP-binding 2	[more]
AT5G45750.1	2.2e-50	46.15	RAB GTPase homolog A1C	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 145..167 score: 41.49 coord: 48..70 score: 54.76 coord: 7..28 score: 51.86 coord: 110..123 score: 53.66 coord: 30..46 score: 32.76
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..211 e-value: 5.7E-6 score: 35.2
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 e-value: 1.7E-34 score: 130.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 e-value: 9.1E-107 score: 370.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..211
None	No IPR available	PANTHER	PTHR47979:SF64	SUBFAMILY NOT NAMED	coord: 1..211
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..211
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..168 score: 9.664
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..210 score: 36.426872
None	No IPR available	CDD	cd01866	Rab2	coord: 3..170 e-value: 1.68724E-127 score: 354.807
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..170 e-value: 9.0E-12 score: 31.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..168 e-value: 2.5E-61 score: 206.0
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..204 score: 18.840319
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..160 e-value: 2.4E-32 score: 109.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..186 e-value: 5.8E-72 score: 243.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10011390.1	HG10011390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030100	regulation of endocytosis
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding