HG10011039 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011039
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	thylakoid lumenal 17.4 kDa protein, chloroplastic
Location	Chr01: 1807370 .. 1810153 (-)
RNA-Seq Expression	HG10011039
Synteny	HG10011039

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTTTATCAATTCCACTCTCTCAAAATGGTTTCTCTCGCAGGTTCTTCTCTGCAAAACGCCCACAAATCATATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGGTTAGTTTTTCTTCTATCTCTTCAACTCTACTTCTATGGATTGATTTTCTCCAATAATTGCTAAACTGAGTACCCTTTTGTGGGTAAATTGCGTTAGAATCTGGGGAGAACTGTTTTCTTTTTACTCAATTCCTGCCCTTTGATGCCTATTATATCTTGTTAGGCTTAGGATCAAGATGCTGGTTCGCCAAATTGGCTAATTCTTTGAATGAGTTCAAAATTTGTAAAAAAAAATTCATGTTTTTGCATACCCTGAAATGTGCTTAGTCGAATTCAATTAGGGGTATTTGGTGGGCTGAGTTCCAATTTTAAAGTCTGAGTTAGTAAGTTTGTGTTTGGGGTGCAGAGTTGTTTAATTTGGAGTTGGGAAACATTAGAGGGTGGGAAAGAGAAAGAGGGGAAGATAAAGTTTTTCGATAAATGTGTAAACTACAATAGTGAATGTGGTTGAAGTTGGTGGAGTTGAGTTATAAAGTCGGTGAGCCAAACACTCCCTTATAAATCTTCACCACGTAGAGGGAAACGAATATCATGTGTAGTGGACGTTAACTGAACCTGCATCTAAGCATTATGAGTTATATTTTAATGGAGTTTTATCTGCCATGCCATTGTGTGCTCACTTACAGCTACTAGGGATGGGGCAGAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGACTTTGACAAATACCTCTCCTGTGATTGCAGCTAATCAGGTTAATAGCATTTTCTGTTGATTTATAGTTTATACATCTAAGTTTGGTAGAGTAGTAGTTTGTACCATAGAGAAATTATCAACTATTTGAAATATATTGATATAATTAAATTTACTGTAGTAATCCATCAACTTAAGTCCATGACAATTTACTGTAATATATTGACTAAATTCAAGTTTTGTATCATTTTCTTTTGATTTGTAGTTTGTAGTGATTTAACAATTGGCATAACATTTTAGAATAATGAAATGCTATTCAAATTTATCACGATGTTTGTGTACATGAGCCAAAAGTTTGCAAGCACCATTTCGAACTCACAATTTTTGCATTTAAATTTAGGCTTAAGATGTAAGACCTAGTTATCATTTTGGCGGATTGAGTGTGTTGGTTTGGAAGCCCTACTTTTCCATCTCCCTCCCCATCATTCTGAATCCACATCCCTTTCTGTCTGTCCTACAATACCGTGATTATAATGCTCTTTCTGATAGGATAACTTGTAAAATTTTCCCGATTCTAACTAAAATTCAGTTATTTACTTCACCAGTTGACATACAGTCATTGTCCTTCGGATACTCTATTTTCTTCTATTCTTGTTATGTTTTTCCTTTTATAGTCATGATTGACAAATGTTATTCACTTTCTGTGTCAAGTGTCAAACAACTCATAACATCTTACTTTGAAAAAGAAATCTGTTGATCTCATAATACCTGGGACTTGCAGAGGCTGCCTCCACTGTCGACAGAACCCAACCGATGCGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACGAATGAAAAAAATCAGTTAAAAGGCAAATCTCTTGCTGCTGCATTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCTTGACCCCCATTCCAATAGGAGGTGGGTAGTTAACAAATCTTTCATATTCTAACACGAATTCCTCATTAAGCAACGGAGGACTTTCATTTTATACAATGACATAGTACATGTTTGGGAGTGATTCTATCATGTTTAAAAATATTTTGAAACACACTTTTAATCACTCAAAATCAATTCAATATTTAATTTTACAGTTTTAAATATGGTTTAGGGTTTTTTCATGCTATTACAGTTGATTTTGCATGATTTAAAAGCTTTTTTTCGAGTGATTTTAACCATTTTGAAATCACTCCAAACATGCCATAAGTTTTTAAACTCTGCTTTCAATACTTGATCTGGTACATAGACAAAATCCACGTGTTCAACACATGCTAGTTTATAGAATAAATCCCAGGCTCCAAAACTATTTAGGAATGCAGATGGTCCCATTTTAATTGTTAACTGAATGGAACATAAAATGATGTTTCATACTATTCTCTCTTCATGTGCTTCAAGTAAATGAATGGGAAGCCAAAAATGCATTCAAGTAGAATATTAAAAGTGTCATTATCTGTCTGTGAATGCCATAATTGATCCTTGCCATGGGTTTGCTAAAAATTATTTAAGTACTGTTTTTTTTTTTATTTTTTATTTTAAGGACTCCGAGATTCCTGAAGAAAAACTCAGAATATGGCTTCAAATATCATGACAAAGTTTCATATTGCAGGTGTTGATTTCTCGAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTGTGTTCAAGAACACTGTCCTTTCAGGGTCGACATTTGATGACGCTCAATTGCAAGATGCAGTTTTTGAGGACACGATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATAA

mRNA sequence

ATGGCCACTTTATCAATTCCACTCTCTCAAAATGGTTTCTCTCGCAGGTTCTTCTCTGCAAAACGCCCACAAATCATATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGCTACTAGGGATGGGGCAGAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGACTTTGACAAATACCTCTCCTGTGATTGCAGCTAATCAGAGGCTGCCTCCACTGTCGACAGAACCCAACCGATGCGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACGAATGAAAAAAATCAGTTAAAAGGCAAATCTCTTGCTGCTGCATTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCTTGACCCCCATTCCAATAGGAGGTGTTGATTTCTCGAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTGTGTTCAAGAACACTGTCCTTTCAGGGTCGACATTTGATGACGCTCAATTGCAAGATGCAGTTTTTGAGGACACGATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATAA

Coding sequence (CDS)

ATGGCCACTTTATCAATTCCACTCTCTCAAAATGGTTTCTCTCGCAGGTTCTTCTCTGCAAAACGCCCACAAATCATATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGCTACTAGGGATGGGGCAGAACCAAGAGAGAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGACTTTGACAAATACCTCTCCTGTGATTGCAGCTAATCAGAGGCTGCCTCCACTGTCGACAGAACCCAACCGATGCGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACGAATGAAAAAAATCAGTTAAAAGGCAAATCTCTTGCTGCTGCATTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCTTGACCCCCATTCCAATAGGAGGTGTTGATTTCTCGAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTGTGTTCAAGAACACTGTCCTTTCAGGGTCGACATTTGATGACGCTCAATTGCAAGATGCAGTTTTTGAGGACACGATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATAA

Protein sequence

MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

Homology

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BLAST of HG10011039 vs. NCBI nr
Match: XP_008455988.1 (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 458.0 bits (1177), Expect = 5.3e-125
Identity = 229/250 (91.60%), Postives = 233/250 (93.20%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MATLSIP SQNGFSR FFS KRPQI+YPFPHSLPRITCSATRDGA+PRENLSPCKHISTV
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 180

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 181 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 237

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 241 PEGRAELGCR 237

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BLAST of HG10011039 vs. NCBI nr
Match: XP_038885483.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 456.8 bits (1174), Expect = 1.2e-124
Identity = 230/250 (92.00%), Postives = 234/250 (93.60%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATR+GAEPRENL PCKHISTV
Sbjct: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRNGAEPRENLPPCKHISTV 60

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWTL NTSPVIAA+QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLANTSPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 180

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNF KANLQGA+FKNTVLSGSTFD+AQLQDAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 181 SNAVLDRVNFEKANLQGALFKNTVLSGSTFDNAQLQDAVFEDTIIGYIDLQKLCVNPTIS 237

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 241 PEGRAELGCR 237

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BLAST of HG10011039 vs. NCBI nr
Match: XP_011651313.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus] >KGN57651.1 hypothetical protein Csa_010496 [Cucumis sativus])

HSP 1 Score: 447.6 bits (1150), Expect = 7.1e-122
Identity = 223/250 (89.20%), Postives = 230/250 (92.00%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MA LS PLS NGFSR FFS +R +I+YPFPHSLPRITCSATRDGAEPRENLSPCKHISTV
Sbjct: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTSPVIAANQRLPPLSTEP+RCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 180

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 181 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTIS 237

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 241 PEGRAELGCR 237

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BLAST of HG10011039 vs. NCBI nr
Match: XP_022984509.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 436.8 bits (1122), Expect = 1.3e-118
Identity = 220/250 (88.00%), Postives = 225/250 (90.00%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MATLSIP SQNGFSRRFFSAK P II PF HSL RI+CSA RDGAEPRE+LSPC HI +V
Sbjct: 41  MATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRDGAEPRESLSPCNHIGSV 100

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTSP  AANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 101 ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 160

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 161 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 220

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 221 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 277

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 281 PEGRAELGCR 277

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BLAST of HG10011039 vs. NCBI nr
Match: KAG6576642.1 (Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014695.1 Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 428.7 bits (1101), Expect = 3.4e-116
Identity = 216/250 (86.40%), Postives = 222/250 (88.80%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MATLSIP SQNGFSRRFFSAK P +  PF HSL  I+CSA R+GAEPRE LSPCKHI +V
Sbjct: 16  MATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRNGAEPREILSPCKHIGSV 75

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTSP  AANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 76  ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 135

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEK QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 136 TNEKRQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 195

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDA+LQDAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 196 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTIS 252

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 256 PEGRAELGCR 252

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BLAST of HG10011039 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2)

HSP 1 Score: 297.4 bits (760), Expect = 1.6e-79
Identity = 155/253 (61.26%), Postives = 189/253 (74.70%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA---TRDGAEPRENLSPCKHI 60
           MA+L +  ++N  S  FFS      +   P SL  + CSA     +G   +++L P K +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 61  STVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRF 120
            ++AC  L   TLT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 121 CDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGG 180
           CDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK             G
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK-------------G 180

Query: 181 VDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNP 240
           V+F+NAV+DRVNFGK+NL+GAVF+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N 
Sbjct: 181 VNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNE 236

Query: 241 TISPEGRAELGCR 251
           +I+ EGR  LGCR
Sbjct: 241 SINEEGRLVLGCR 236

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BLAST of HG10011039 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 51/179 (28.49%), Postives = 80/179 (44.69%), Query Frame = 0


Query: 76  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAA 135
           VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 79  VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 138

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANL 195
            M E+ F G+  +   + KA A  A+F              G D S+ ++DR+   +ANL
Sbjct: 139 DMRESDFSGSTFNGAYLEKAVAYKANF-------------SGADLSDTLMDRMVLNEANL 198

Query: 196 QGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 250
             AV   +VL+ S    A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 199 TNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

[Close]

BLAST of HG10011039 vs. ExPASy Swiss-Prot
Match: P81778 (Thylakoid lumenal 17.4 kDa protein (Fragment) OS=Spinacia oleracea OX=3562 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 2.2e-04
Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 0


Query: 79  ANQRLPPLSTEPNRCERAFVGNT 102
           ANQRLPPLS +P+RCERAFVGNT
Sbjct: 1   ANQRLPPLSNDPDRCERAFVGNT 23

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BLAST of HG10011039 vs. ExPASy TrEMBL
Match: A0A1S3C2V7 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496052 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.5e-125
Identity = 229/250 (91.60%), Postives = 233/250 (93.20%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MATLSIP SQNGFSR FFS KRPQI+YPFPHSLPRITCSATRDGA+PRENLSPCKHISTV
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 180

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 181 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 237

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 241 PEGRAELGCR 237

[Close]

BLAST of HG10011039 vs. ExPASy TrEMBL
Match: A0A0A0LC74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 3.4e-122
Identity = 223/250 (89.20%), Postives = 230/250 (92.00%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MA LS PLS NGFSR FFS +R +I+YPFPHSLPRITCSATRDGAEPRENLSPCKHISTV
Sbjct: 1   MAALSTPLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTSPVIAANQRLPPLSTEP+RCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 180

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 181 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTIS 237

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 241 PEGRAELGCR 237

[Close]

BLAST of HG10011039 vs. ExPASy TrEMBL
Match: A0A6J1JAQ7 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482783 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 6.1e-119
Identity = 220/250 (88.00%), Postives = 225/250 (90.00%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MATLSIP SQNGFSRRFFSAK P II PF HSL RI+CSA RDGAEPRE+LSPC HI +V
Sbjct: 41  MATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRDGAEPRESLSPCNHIGSV 100

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTSP  AANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 101 ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 160

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 161 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 220

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 221 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 277

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 281 PEGRAELGCR 277

[Close]

BLAST of HG10011039 vs. ExPASy TrEMBL
Match: A0A6J1E548 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430851 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.8e-116
Identity = 215/250 (86.00%), Postives = 222/250 (88.80%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MATLSIP SQNGFSRRFFSAK P +  PF HSL  I+CSA RDGA PRE+LSPC HI +V
Sbjct: 45  MATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRDGAVPRESLSPCNHIGSV 104

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTSP  AANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 105 ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 164

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 165 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 224

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDA+LQDAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 225 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTIS 281

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 285 PEGRAELGCR 281

[Close]

BLAST of HG10011039 vs. ExPASy TrEMBL
Match: A0A6J1G0I9 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449567 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 6.3e-116
Identity = 216/250 (86.40%), Postives = 224/250 (89.60%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSATRDGAEPRENLSPCKHISTV 60
           MA LSIPLSQNGFSR F+SAKRPQ+I P   SL  ITC A  DGAEP+E+LSPCKHI TV
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60

Query: 61  ACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWTLTNT+PVIAA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDF 180
           TN+K+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK             GVDF
Sbjct: 121 TNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK-------------GVDF 180

Query: 181 SNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 240
           SNAVLDRVNFGKANLQGA+FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS
Sbjct: 181 SNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIS 237

Query: 241 PEGRAELGCR 251
           PEGRAELGCR
Sbjct: 241 PEGRAELGCR 237

[Close]

BLAST of HG10011039 vs. TAIR 10
Match: AT5G53490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 297.4 bits (760), Expect = 1.1e-80
Identity = 155/253 (61.26%), Postives = 189/253 (74.70%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA---TRDGAEPRENLSPCKHI 60
           MA+L +  ++N  S  FFS      +   P SL  + CSA     +G   +++L P K +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 61  STVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRF 120
            ++AC  L   TLT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 121 CDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGG 180
           CDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK             G
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK-------------G 180

Query: 181 VDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNP 240
           V+F+NAV+DRVNFGK+NL+GAVF+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N 
Sbjct: 181 VNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNE 236

Query: 241 TISPEGRAELGCR 251
           +I+ EGR  LGCR
Sbjct: 241 SINEEGRLVLGCR 236

[Close]

BLAST of HG10011039 vs. TAIR 10
Match: AT5G53490.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 296.2 bits (757), Expect = 2.5e-80
Identity = 154/252 (61.11%), Postives = 188/252 (74.60%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA--TRDGAEPRENLSPCKHIS 60
           MA+L +  ++N  S  FFS      +   P SL  + CS     +G   +++L P K + 
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSGENRENGEGVKKSLFPLKELG 60

Query: 61  TVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFC 120
           ++AC  L   TLT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRFC
Sbjct: 61  SIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFC 120

Query: 121 DYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGV 180
           DYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK             GV
Sbjct: 121 DYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK-------------GV 180

Query: 181 DFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPT 240
           +F+NAV+DRVNFGK+NL+GAVF+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +
Sbjct: 181 NFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNES 235

Query: 241 ISPEGRAELGCR 251
           I+ EGR  LGCR
Sbjct: 241 INEEGRLVLGCR 235

[Close]

BLAST of HG10011039 vs. TAIR 10
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 292.0 bits (746), Expect = 4.7e-79
Identity = 155/267 (58.05%), Postives = 189/267 (70.79%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFFSAKRPQIIYPFPHSLPRITCSA-----------------TRD 60
           MA+L +  ++N  S  FFS      +   P SL  + CSA                   +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAKVVYVILICIMFSAGENREN 60

Query: 61  GAEPRENLSPCKHISTVACGLLAVWTLTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIG 120
           G   +++L P K + ++AC  L   TLT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIG
Sbjct: 61  GEGVKKSLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIG 120

Query: 121 QANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK 180
           QANGVYDKP+DLRFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK
Sbjct: 121 QANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK 180

Query: 181 GKTLSILTPIPIGGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGSTFDDAQLQDAVFEDT 240
                        GV+F+NAV+DRVNFGK+NL+GAVF+NTVLSGSTF++A L+D VFEDT
Sbjct: 181 -------------GVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDT 240

Query: 241 IIGYIDLQKLCVNPTISPEGRAELGCR 251
           IIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 241 IIGYIDLQKICRNESINEEGRLVLGCR 250

[Close]

BLAST of HG10011039 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 62.0 bits (149), Expect = 7.8e-10
Identity = 51/179 (28.49%), Postives = 80/179 (44.69%), Query Frame = 0


Query: 76  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAA 135
           VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 79  VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 138

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANL 195
            M E+ F G+  +   + KA A  A+F              G D S+ ++DR+   +ANL
Sbjct: 139 DMRESDFSGSTFNGAYLEKAVAYKANF-------------SGADLSDTLMDRMVLNEANL 198

Query: 196 QGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 250
             AV   +VL+ S    A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 199 TNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

[Close]

BLAST of HG10011039 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 62.0 bits (149), Expect = 7.8e-10
Identity = 51/179 (28.49%), Postives = 80/179 (44.69%), Query Frame = 0


Query: 76  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAA 135
           VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 5   VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 64

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGKTLSILTPIPIGGVDFSNAVLDRVNFGKANL 195
            M E+ F G+  +   + KA A  A+F              G D S+ ++DR+   +ANL
Sbjct: 65  DMRESDFSGSTFNGAYLEKAVAYKANF-------------SGADLSDTLMDRMVLNEANL 124

Query: 196 QGAVFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 250
             AV   +VL+ S    A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 125 TNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 166

The following BLAST results are available for this feature:

BLAST of HG10011039 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455988.1	5.3e-125	91.60	PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo]	[more]
XP_038885483.1	1.2e-124	92.00	thylakoid lumenal 17.4 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_011651313.1	7.1e-122	89.20	thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus] >KGN57651.1 ...	[more]
XP_022984509.1	1.3e-118	88.00	thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]
KAG6576642.1	3.4e-116	86.40	Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosper...	[more]

BLAST of HG10011039 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P81760	1.6e-79	61.26	Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
Q8H1Q1	1.1e-08	28.49	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
P81778	2.2e-04	86.96	Thylakoid lumenal 17.4 kDa protein (Fragment) OS=Spinacia oleracea OX=3562 PE=1 ...	[more]

BLAST of HG10011039 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C2V7	2.5e-125	91.60	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0LC74	3.4e-122	89.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1	[more]
A0A6J1JAQ7	6.1e-119	88.00	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1E548	2.8e-116	86.00	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=...	[more]
A0A6J1G0I9	6.3e-116	86.40	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of HG10011039 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53490.1	1.1e-80	61.26	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.2	2.5e-80	61.11	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.3	4.7e-79	58.05	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12250.1	7.8e-10	28.49	Pentapeptide repeat-containing protein	[more]
AT1G12250.2	7.8e-10	28.49	Pentapeptide repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 132..164 e-value: 0.002 score: 17.7 coord: 184..222 e-value: 1.0E-8 score: 34.7
None	No IPR available	GENE3D	2.160.20.80		coord: 113..250 e-value: 1.1E-19 score: 71.9
None	No IPR available	PANTHER	PTHR47485:SF1	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 1..250
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 124..232
IPR044195	Pentapeptide repeat containing protein TL17-like	PANTHER	PTHR47485	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 1..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10011039.1	HG10011039.1	mRNA