HG10010934 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010934
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S ribosomal protein L37a
LocationChr01: 591584 .. 595188 (-)
RNA-Seq ExpressionHG10010934
SyntenyHG10010934
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCACATGGAAACAAACAGACTTCTTGGGTCCCCCCTCATCTTTGTTACTAGCGATGACAGGTGTGAGGAAGATCCACATGCACCTCGCTGCAGCGAATGGAGGATAAATCGAGCTCAAGCCTAATAAAAAATAGAAAGAACAACAAACCAAAACTAGTTCTCTATTCAAGAATGAGAGTTCTCCATTGAGAAAAACATTGATGAAAATAACTCTTGTTTCTAAAAAAAAAAAAAAAAATGAATCGAGTAGAATCCTACTCTAAAATTAAAAAACTCTCTGTTATTGAAATGAAAAAAAAAACAGCATAATCATAAAAGATTTGAAAAATAGGTATGCCTTAAAATTTAAAACCGCTCTAGTGAATCTACTATAATTTATTGCATCAATTTTATTTTTTTAAAGATAACAAATAAGTACATATCTTAAAGTAATGCATACTTTTGGCATGTGTGAGAACCATTTATGGTAATTGAAATAAAAATTTAACTAATGGTGTAAATTGTTATATTTGTTTAAATTCAAAATTAATGAAAAAATATCAAAATATTTACAGAAAAAAGTAAAAAAAATACTGATAGATATTAATTGACTTCTATCAACATCTATCATTGATAAACTTCTATCAACGTCTATCACAACTATTTAAAATTTTTATTATTTTGTATATATAATTTCTCTTTAAAAATTTTTCTTTAAATTGTTGTCGCTTGTCAAGTTTAGAGCAAAAATTGATTTTTCTAAATTTAAATTAAAAAAAATAAAAAAAATAAAAAAAATTTCTTAGAAACAAAAGAGTGCTTCTTTGGTCAAATTGTGGCCCAAAATTTTCGAGAAAAAAAAAATGAAAAAGGATTCCGTTGCCGGGACTTGAACCCGGGTCTCTCGGGTGAGAGCCGAGTATCCTAACCAACTAGACTACAACGGATCGTTGTTTGGTTCATTCAAATTCATCATTATATTTATTTATAAAATGGAAATTTACGTTTTTGCCTTTACGATTTTTATTATTGTAAAAAAAGAAGAAGAACAAAATTCAATTCTAGGGTTTCTCTGGTTCAAGTTCTTCCCACTTTCACCAAATCTTCTTCCGAGATCTTGTGGTCAGCCAAGCAGCAATGGTAATTCCTCTTCCTTCGATTCATTGGCTCGTAAAGTTCTCGACTATCTCTGTTTCTCCGTAAAGAATTCTCTCGGAAAATTATTCACTTTATTTGTTCGTATTGTTCTGTTGGACATGCTTTACCTTGATTGTCTTCTTGAAGGATTTGGGGATTTTCTTTTTCTTTTTGGTGATTTGGTTTCCTAATAGATGAAGTTCTTCCCCGTTTTACGATTTATTTTCATGATTCGAGTTTACTGTTAAATTTTCAATGGGCCCTGGAACATTGCGTTGTTAGTTTCTAACTGACCATTCTAGTACTTACATCTCCTTTTAATTGAGGACAAGCTGAGACATCGAGCTTGTGTAACCATTTTCCCCCCCATTAAGAACTGGAATTGATGACATGTGATTACCAGTACAGCATAGCTTGTAGCTACGAAAAAGATAATGCAATAGGTCTTAGAACTTGTAAATTATCACGAGTCCCGACTCACAAGTGTTTTGGTTTGAATTTATCTTTCGCAACCGTGTTGAACTCCAAACGTGGTTAATATCTGTAGGATTTTAATTGTTGTGACTGTGATAGATTTCATGAATCATGCTCCATAAAAGGATCATGTGCTAAGTGCTTTAAGATGCAATTAGCTTGTTTTCGAAGTTTAGGGCTTATTAATATCGTTGGACTAGGGAGACTGCCAAGAGATCAGCAGGAATTGTGCTGCTTTCTTTGTTGCTTAGAAGTTTTTTTTCCTGCTTTGTTGCACAGTTCATATACACCTTTATGCGTATCTTGATTCTTCGAGATCCAAATTAGTTCATTTCTTTTACCCCCCACATGCCCACACTCCTGCTCTAATATCCTTGGATTTCTTACACTATCCATGGAAAATGAAATGCTTAAAATTCTTTTGGTGAGAATTGACTATTGCATTCATATTCATTGGATGTGAAAGGTTTTAAACTGATGTCTTTCTTTTTACACAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGGAAATATGGTAAATATTTTGAAATAAGGATTTATGATTTATAATTTATAATTTCGGATCTTGTATGGTACATAACTGGTTTTTGCAGAGAATGCTTGTTTTTTGTATTATTGTATTCCATTATCGTTATTCTGTATCTAGTACAGTCTGAATCCATTTACTTCTTATTCTTCCTTAGGTTCTATAATCGATCAAAAGAATGTTCAATTAATTGCTTGGTTCTTACAAAAACTATCCTAATCTCCTGTCTGAGCTGTATTTTCATGCAGTAGTTTTACCTGAGTTTTCATCTTAGGAAAGTCATAGATGACCTTTAAAGCCTTAGTAATAAGTTACAAAATTTATTTGGATCGAAGAGTGAGAAGTGTCTTCTGTAGAAATCAAACTAATAAATAATTGTTATGTTTGGGATTGAATATAGTAGTGGTCCGTCTATATATCATTTTATCCATAAATCGGAGGGTTCAACATTGATTTTAAGAATTAATTGATCTCATACAAAAATAAATCTCATCAATCACAATTCCAATATAAATATTAATACTAATAACAAGAAGTACAGCTTAGTTGGAAGTAAAACAACTTAATTATTAATTTAAATAACTGTTTAAAAAATGGATTTACAGAAATATCTATTGATATTGATATGTACTTTGCTATACATGACACCGTTAATTGATGGTTTTGGTGGTAAAATTACTTTAAAATGTTAAGTGAAATGTGGCATGATATACACCAATATTATCAACAAACTATATTGCTTGAGTTATGAAGATCTCTCTGCTTCTTCTTCTCTTAACTTTGGTTGATAACAGGTACCCGCTATGGTGCCAGTCTGAGAAAGCAGATAAAAAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAGTTTTGTGGAAAGGCAAGTAGTTGTCCTCTCTTTTTGGCCCATGTTTTTGATTTCCTAATCACTTGTTCATGTTCCAATTATATTGTTCCCCATTGCAGTATGCAGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGTGGTGCCTACACTCTCAAGTAAGGCTACGTCTTTTTACTTTTCTTTGGTTTTTATTTCTTTTTCTAATTATTGTTCTTGTTATATAAATATAGGTTAAATTACAATTTAACCTTATAGTTTGAAAAAAGTTAGAATTTAGTCCTTACAGTTTGATAAAACCTTCCTAAAGTGCAGGGACTCTTATGAGGGTTTTATCTAACCATAGGGACCATTTATGAGGTTTTATCACGCAATAAGAACTAAATTCTAACTTTTAAAACCACAAGGACTAAATTCTAATTTTCGTGAAACCATAGGAATCAAATTTGCCTTTTAATCATAGATATATTTGATTTTGATGTTATTTTTGGTAACTTTGACAGCACTGCTAGTGCTGTGACAGTGAGAAGCACTATTAGGAGGCTGAGAGAGCAGACTGAAAGTTAA

mRNA sequence

ATGACCCACATGGAAACAAACAGACTTCTTGGGTCCCCCCTCATCTTTGTTACTAGCGATGACAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGGAAATATGTATGCAGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGTGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTATTAGGAGGCTGAGAGAGCAGACTGAAAGTTAA

Coding sequence (CDS)

ATGACCCACATGGAAACAAACAGACTTCTTGGGTCCCCCCTCATCTTTGTTACTAGCGATGACAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGGAAATATGTATGCAGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGTGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTATTAGGAGGCTGAGAGAGCAGACTGAAAGTTAA

Protein sequence

MTHMETNRLLGSPLIFVTSDDRQREPRRQALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Homology
[Close]
BLAST of HG10010934 vs. NCBI nr
Match: ONM18155.1 (60S ribosomal protein L37a-2 [Zea mays])

HSP 1 Score: 97.8 bits (242), Expect = 4.6e-17
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 30  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
           ALL   +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 141 ALLSFQFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 194

[Close]
BLAST of HG10010934 vs. NCBI nr
Match: RZC86542.1 (hypothetical protein C5167_029893 [Papaver somniferum] >RZC86543.1 hypothetical protein C5167_029894 [Papaver somniferum])

HSP 1 Score: 97.8 bits (242), Expect = 4.6e-17
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 34 NMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
          + YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 50 HQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 99

[Close]
BLAST of HG10010934 vs. NCBI nr
Match: ONM18159.1 (60S ribosomal protein L37a-2 [Zea mays])

HSP 1 Score: 97.8 bits (242), Expect = 4.6e-17
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 30  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
           ALL   +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 87  ALLSFQFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 140

[Close]
BLAST of HG10010934 vs. NCBI nr
Match: RYQ87783.1 (hypothetical protein Ahy_B09g095323 [Arachis hypogaea])

HSP 1 Score: 97.4 bits (241), Expect = 6.0e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 36  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
           YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 247 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 294

[Close]
BLAST of HG10010934 vs. NCBI nr
Match: RXI00911.1 (hypothetical protein DVH24_001145 [Malus domestica] >TQD91193.1 hypothetical protein C1H46_023207 [Malus baccata])

HSP 1 Score: 97.4 bits (241), Expect = 6.0e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 36 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
          YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 50 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 97

[Close]
BLAST of HG10010934 vs. ExPASy Swiss-Prot
Match: Q9XHE4 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.7e-19
Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0 

Query: 36 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
          YAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 45 YAVKRKAVGIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]
BLAST of HG10010934 vs. ExPASy Swiss-Prot
Match: Q9SRK6 (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.7e-19
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 0 

Query: 36 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
          Y+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 45 YSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]
BLAST of HG10010934 vs. ExPASy Swiss-Prot
Match: P0DKK1 (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.7e-19
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 36 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
          +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]
BLAST of HG10010934 vs. ExPASy Swiss-Prot
Match: P0DKK2 (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.7e-19
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 36 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
          +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]
BLAST of HG10010934 vs. ExPASy Swiss-Prot
Match: Q9ZRS8 (60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.5e-18
Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 0 

Query: 36 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 83
          +AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Sbjct: 45 FAVKRKAVGIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91

[Close]
BLAST of HG10010934 vs. ExPASy TrEMBL
Match: K7KN96 (Uncharacterized protein OS=Glycine max OX=3847 GN=100784543 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.9e-18
Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 34 NMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
          N YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 23 NFYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 72

[Close]
BLAST of HG10010934 vs. ExPASy TrEMBL
Match: A0A1D6ECX6 (60S ribosomal protein L37a-2 OS=Zea mays OX=4577 GN=100280675 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-17
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 30  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
           ALL   +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 141 ALLSFQFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 194

[Close]
BLAST of HG10010934 vs. ExPASy TrEMBL
Match: A0A1D6ECX8 (60S ribosomal protein L37a-2 OS=Zea mays OX=4577 GN=100280675 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-17
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 30  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
           ALL   +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 87  ALLSFQFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 140

[Close]
BLAST of HG10010934 vs. ExPASy TrEMBL
Match: A0A0V0WQ09 (60S ribosomal protein L37a OS=Trichinella patagoniensis OX=990121 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.9e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 36 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
          YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 17 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 64

[Close]
BLAST of HG10010934 vs. ExPASy TrEMBL
Match: A0A1S3VC88 (60S ribosomal protein L37a OS=Vigna radiata var. radiata OX=3916 GN=LOC106773736 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.9e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 36 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
          YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 45 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]
BLAST of HG10010934 vs. TAIR 10
Match: AT3G10950.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 94.0 bits (232), Expect = 6.2e-20
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 0 

Query: 36 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 84
          Y+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 45 YSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]
BLAST of HG10010934 vs. TAIR 10
Match: AT3G60245.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 91.3 bits (225), Expect = 4.0e-19
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 36 YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 83
          Y VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 45 YGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91

The following BLAST results are available for this feature:
BLAST of HG10010934 vs. NCBI nr
Match NameE-valueIdentityDescription
ONM18155.14.6e-1788.8960S ribosomal protein L37a-2 [Zea mays][more]
RZC86542.14.6e-1796.00hypothetical protein C5167_029893 [Papaver somniferum] >RZC86543.1 hypothetical ... [more]
ONM18159.14.6e-1788.8960S ribosomal protein L37a-2 [Zea mays][more]
RYQ87783.16.0e-17100.00hypothetical protein Ahy_B09g095323 [Arachis hypogaea][more]
RXI00911.16.0e-17100.00hypothetical protein DVH24_001145 [Malus domestica] >TQD91193.1 hypothetical pro... [more]
BLAST of HG10010934 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9XHE46.7e-1997.9260S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1[more]
Q9SRK68.7e-1993.75Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB... [more]
P0DKK18.7e-1993.7560S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g06... [more]
P0DKK28.7e-1993.7560S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g05... [more]
Q9ZRS82.5e-1895.7460S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1[more]
BLAST of HG10010934 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
K7KN965.9e-1898.00Uncharacterized protein OS=Glycine max OX=3847 GN=100784543 PE=3 SV=1[more]
A0A1D6ECX62.2e-1788.8960S ribosomal protein L37a-2 OS=Zea mays OX=4577 GN=100280675 PE=3 SV=1[more]
A0A1D6ECX82.2e-1788.8960S ribosomal protein L37a-2 OS=Zea mays OX=4577 GN=100280675 PE=3 SV=1[more]
A0A0V0WQ092.9e-17100.0060S ribosomal protein L37a OS=Trichinella patagoniensis OX=990121 GN=RPL37A PE=3... [more]
A0A1S3VC882.9e-17100.0060S ribosomal protein L37a OS=Vigna radiata var. radiata OX=3916 GN=LOC106773736... [more]
BLAST of HG10010934 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G10950.16.2e-2093.75Zinc-binding ribosomal protein family protein [more]
AT3G60245.14.0e-1993.62Zinc-binding ribosomal protein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002674Ribosomal protein L37aePFAMPF01780Ribosomal_L37aecoord: 35..79
e-value: 9.0E-17
score: 60.9
IPR011331Ribosomal protein L37ae/L37eGENE3D2.20.25.30coord: 21..83
e-value: 1.8E-18
score: 68.4
NoneNo IPR availablePANTHERPTHR48149:SF260S RIBOSOMAL PROTEIN L37Acoord: 35..83
NoneNo IPR availablePANTHERPTHR4814960S RIBOSOMAL PROTEIN L37A-2coord: 35..83
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 34..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010934.1HG10010934.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009536 plastid
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome