HG10010816 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010816
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
LocationChr06: 26170995 .. 26174229 (-)
RNA-Seq ExpressionHG10010816
SyntenyHG10010816
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCAAGACAGAAAGCGGTGGCGACGCTGCCGAATCTAATCAGAAGCCTTAGAAACGATCGCCGGAGGCCCGGTCTCAGCCAGCCTCTGCCGTCTTTGAGACGCGCATTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCCGAAGATCAGCTTCGCTTTCAACGGTACATACAGCCCTAACTTCATCGATTTCCTTCCTCAATTTGATATTGTTGATTCTTTTTCTGTGGGGATTTTAGGTATACTGAGACGGGGTTCACTGTGAACGGAGTGGATTATGAGGGGAGCTTGCTGTGTGTTGGGAATTTGTTGATGTCTTGGAGTCCTAAGAAATTTTCAGAAATTACGCCTCAGAGGTTTTCTTTGCATTTCTTCTTCCTTACCTTGCAATACTTTATTTACTTCCTTACTTCTTTTTGGTGATTGAAATATATTTTTTGCAGCTTATCTATCTTCCAGATTGTGCGGCCTGTTCCAGGTAAAATCTGTTGTTGTGTTTGGCAATATGATTGATTTATTTGACAATGTTGAGGTAGTTTAAATATGAATGTCTGAAGTTACCTAGATTCACGTTTCTATTGAAATGTTTTCTCTTGAGCTATTTTTCTCGAGTTTCCATTTCTTGGTTCTTATATATGTGTCGTCAATAAGTGGCATAGGTTTGATAAATAACTTAAAGGGAATGAGTTCAACCCCTGGTGGCCACCTACCTAGGATTTGATATCTTCTAAGTTTCCTTGGCAATTGGTACTCAGATGTTGTATATGTGTGTGTATGTGTGTGTATATCAATATATATTTGTAGATGTATGTGTATATATATTTCTTTGGTCAAGCAAGTTTCTTGGTCCATTTTTTCTGTGCTTGAGCATGAGGGAGACTTCATCATTTGTTTCCTTTTTTCTTTTAGTACTACATGTGGGGTAGGATTTGAACCTCTGACTTTTTGGTCGAAAATATGTCTAGTGAGATATGTGCAATTAGACTTATTTGTTTCTTTGAAGTATCCTACAATCATGTCTCGGTTTTGCTGTTTAAAGGATTAGATTTTGGAGAATTTGAAGCATGTACCAAGTTGAAAATGTAGATGAACCTTAAGTTCTTAAACAGGAAGATGATGACGGTTTTCTTTTTCTTCTCTCTTTCTTCGTTTTTTGATAGACAAGTCTACCCTCCTAATACTTTGATTACGCTAGAAGAGGGAACAGAACCACATGAGATAGTTGCATCAGCTGGCTAATGTAGTTAGCTTAACTGGATCAGTTTGCCAATATTACTGTTATGCTTAATAGTTAGCTCAACTGGAAGAGGCTTGTAATCTGTTAATAAGTTATAGAGGAGATGGGAGAATGGATCCAGAATTTGTAAATTTGTTATAGAGAATGGAAGGAATAACTTAATTAGAGTTGGGTGACATCAGATTCTCCGATATGTGGAAGATTTGCACTTTTCAGCTAGTTACCCAAGCCCTAACCTCTTGCTTCTTTATTCTTTCTGAGTCTGAGATAATAGATGTATCAAAATCAGCTATCTTGAGGATGACACATATGGGGTGTACTTTTCTGTTGATACGGTTGATTTCTGACATGAGAGATTACCTCACTTTGAAATTGTATGCATAAGCTAGCCTGTCAACCAAATGGTCTGTTTATTTTTCATCACTGCCATCATCATCTTAGTGACGTGTACTGTGCATAAGTTGCTCTGTGCATGTGTTGCTCTGTGCAAGTTTTTCTTTTTTTACTGTCAATTGATTACTTTTCTTCATTTGAAAGCTTGTTTATTTTCGTTAATGTCAGAAATTCTTATACTTGGCTGTGGGAGATATACTGAAACAATAAATCCTGAATTGAGGGAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGGTACTTATGGTTTGAAATTATGTTGTTTGTTTTATAATTGGATCTGGTGTAAACTAAATGAAATGAAATTTTATTGAACTATAATCAGCCTCCAACATACAACACTCTGCCTCTAAATAGGCTTAAGCCATCCTGACCTACAACCTAACCAATCGGTCATCAACTCTAATAGTTTAAAAGAACCCTTAACCGAACAGCCAACTAAACAACTAAAGCAACTCTGAAACAAAACAACTTTAACAAAAACTAAAACAGAACAATAAAACCAACTCAAGATCCTAATAAGATCTATATCAGGATCTGTCTTGATCAATATTAACCGGTGACTAAGATAATTATTTTTCATGCAACTGAAAACCAAGACATTGAACTATCTTACGAGTCTGTGACTGATTGGTGGGAAACAGTATATTCTTTGTTTAGGATAAGAAAATAGGTGGGAAAACATCCAGTATCCACCAACCATAGTACCCTAGTAAAAAAAGATTGTAGTAGGTTACTGTATTGTTAACTTTGTGATAAGCAAAATTAATGTGCACGATGCACCAGTAATATCCTCTTTTCCTTGCAATCACTTGATCAGATGGGGTTCTAAAGACTCTATAGCTATCTAAGATATTAAAAAACCACATGGTTTCTACCAAACCAACTGCTGCTGGGTAATGTTGTAGTGCTAGTTTCAGACTTGTGGGAAATAGAGTGATCTGAATCATAGTTGATATTTGAGAATGGAGTTACGTTCAACTGTTCAAGAACTATCTTTAGAGTCCAGATCACATTTGGATCTAATTTTGCTCAAGAAAGAAACTAATTTGGATCTAAGTGGGTTGCAGTTGATTAAATTACCAATTACAATGATGAATGATCATCTGAGGACTTACTACTTTGAACTGTGGGATGATTGGAATCTCAAATGGACTCATTTTATCTAAATTTAATTAGTTTTCGACATGATGGCCCCTTGGTTGGTTATGTGACTGTAGACCAAGTAGTTCTCTGCACTCTGTCTTTCTCGCAAGGGAATCCTCAATGTGTCAAAATGGAAGGAATGAAATATGCACTCTACTTGGGCAATGGGCATTCTCCTTCTGTATTTCTCGTTTGGATATTGCCAAATACCCAAATAGTACCTCTCATTTAACTTCAAACTTTTTGGTCGAGAATATATGTTTAAACCAATTGTTCTAAGTTGGCATTTTTATCATTCACTAGACTAAAAAACCTTTGTTATTTGCAGAGAAATGCGGCCTCAACATATAATATCCTAAATGAGGAAGGTAGAATTGTTGCTGCAGCACTTCTTCCCTACGGAGTTTCTTCATGA

mRNA sequence

ATGGCGGCAAGACAGAAAGCGGTGGCGACGCTGCCGAATCTAATCAGAAGCCTTAGAAACGATCGCCGGAGGCCCGGTCTCAGCCAGCCTCTGCCGTCTTTGAGACGCGCATTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCCGAAGATCAGCTTCGCTTTCAACGGTATACTGAGACGGGGTTCACTGTGAACGGAGTGGATTATGAGGGGAGCTTGCTGTGTGTTGGGAATTTGTTGATGTCTTGGAGTCCTAAGAAATTTTCAGAAATTACGCCTCAGAGCTTATCTATCTTCCAGATTGTGCGGCCTGTTCCAGAAATTCTTATACTTGGCTGTGGGAGATATACTGAAACAATAAATCCTGAATTGAGGGAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGAGAAATGCGGCCTCAACATATAATATCCTAAATGAGGAAGGTAGAATTGTTGCTGCAGCACTTCTTCCCTACGGAGTTTCTTCATGA

Coding sequence (CDS)

ATGGCGGCAAGACAGAAAGCGGTGGCGACGCTGCCGAATCTAATCAGAAGCCTTAGAAACGATCGCCGGAGGCCCGGTCTCAGCCAGCCTCTGCCGTCTTTGAGACGCGCATTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCCGAAGATCAGCTTCGCTTTCAACGGTATACTGAGACGGGGTTCACTGTGAACGGAGTGGATTATGAGGGGAGCTTGCTGTGTGTTGGGAATTTGTTGATGTCTTGGAGTCCTAAGAAATTTTCAGAAATTACGCCTCAGAGCTTATCTATCTTCCAGATTGTGCGGCCTGTTCCAGAAATTCTTATACTTGGCTGTGGGAGATATACTGAAACAATAAATCCTGAATTGAGGGAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGAGAAATGCGGCCTCAACATATAATATCCTAAATGAGGAAGGTAGAATTGTTGCTGCAGCACTTCTTCCCTACGGAGTTTCTTCATGA

Protein sequence

MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRYTETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Homology
[Close]
BLAST of HG10010816 vs. NCBI nr
Match: XP_038906819.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida])

HSP 1 Score: 334.3 bits (856), Expect = 6.0e-88
Identity = 166/171 (97.08%), Postives = 170/171 (99.42%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRYT 120
           TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITP+SLSIFQIVRP+PEILILGCGRYT
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120

Query: 121 ETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           E +NPELR+FIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of HG10010816 vs. NCBI nr
Match: XP_023513625.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita pepo subsp. pepo] >KAG6593730.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026069.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.7 bits (831), Expect = 4.8e-85
Identity = 159/171 (92.98%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRS+R DRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRYT 120
           TETGFTVNG+DYEGSLLCVGNLLMSWSPKKFSEITP+SLSIFQI+RP+PEIL+LGCGRY 
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120

Query: 121 ETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           E +NPELR+FIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of HG10010816 vs. NCBI nr
Match: XP_008460070.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis melo] >KAA0039965.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 324.7 bits (831), Expect = 4.8e-85
Identity = 159/171 (92.98%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLP+LIR+L+NDRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRY
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRYT 120
           TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITP SLSIFQIVRP+PEIL+LGCGRYT
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRPIPEILVLGCGRYT 120

Query: 121 ETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           E +NPELR+FIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of HG10010816 vs. NCBI nr
Match: XP_031743290.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus])

HSP 1 Score: 324.3 bits (830), Expect = 6.2e-85
Identity = 160/171 (93.57%), Postives = 167/171 (97.66%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIR+L+NDRR+PG SQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRYT 120
           TETGFTVNGVDYEGSLLCVGNLLMSW+PKKFSEIT  SLSIFQIVRP+PEILILGCGRYT
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDSLSIFQIVRPIPEILILGCGRYT 120

Query: 121 ETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           E +NPELR+FIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of HG10010816 vs. NCBI nr
Match: XP_022964366.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita moschata])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 158/171 (92.40%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRS+R DRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRYT 120
           TETGFTVNG+DYEGSLLCVGNLLMSWSPKKFSEITP+SLSIFQI+RP+PEIL+LGCGRY 
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120

Query: 121 ETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           E +NP+LR+FIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPQLRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of HG10010816 vs. ExPASy Swiss-Prot
Match: Q6DFN1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus tropicalis OX=8364 GN=ndufaf3 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.4e-16
Identity = 39/109 (35.78%), Postives = 64/109 (58.72%), Query Frame = 0 

Query: 58  QRYTETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCG 117
           + Y+  GF +NG    G    +   ++ W+   + +I  +SLS+F ++ P  EIL++G G
Sbjct: 66  ETYSSQGFIINGDKVVGPCAVIPKAILQWNVGSYKDINLESLSLFHMLSPRIEILVVGTG 125

Query: 118 RYTETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP 167
              E ++P + +F+R  G+ +E  DT NA +T+N L  E RI AAAL+P
Sbjct: 126 DRVERLDPNILKFMRQKGVAVEVQDTANACATFNFLVSERRITAAALIP 174

[Close]
BLAST of HG10010816 vs. ExPASy Swiss-Prot
Match: O08776 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus norvegicus OX=10116 GN=Ndufaf3 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15
Identity = 41/124 (33.06%), Postives = 69/124 (55.65%), Query Frame = 0 

Query: 43  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIF 102
           +I+L+ N     +    Y   GFT+NG    G    +   ++ W+     +IT +S SIF
Sbjct: 47  RISLLQNEFPQAVYIDSYNSRGFTINGNRVFGPCALLPQTVVQWNVGSHQDITEESFSIF 106

Query: 103 QIVRPVPEILILGCGRYTETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAA 162
            ++ P  EI+++G G  TE ++ ++ + +R  G+ +E  DT NA +T+N L  EGR+  A
Sbjct: 107 WMLEPRIEIVVVGTGNKTERLHSQVLQAMRQRGIAVEIQDTPNACATFNFLCHEGRVTGA 166

Query: 163 ALLP 167
           AL+P
Sbjct: 167 ALIP 170

[Close]
BLAST of HG10010816 vs. ExPASy Swiss-Prot
Match: A1L1F1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Danio rerio OX=7955 GN=ndufaf3 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.9e-15
Identity = 39/107 (36.45%), Postives = 65/107 (60.75%), Query Frame = 0 

Query: 60  YTETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRY 119
           Y+  GF +NG    G    +   ++ W+    S+I+ +SLS+F ++ P  E+L+LG G  
Sbjct: 62  YSPRGFNINGNTVFGPCAVLPPAILQWNVGSHSDISVESLSLFYLLEPQIEVLVLGTGAR 121

Query: 120 TETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP 167
           TE ++ E+ E ++  G+ +E  DT NA +T+N L+ E R+ AAAL+P
Sbjct: 122 TERLHAEVLEELKKRGIAVEVQDTPNACATFNFLSSEKRLAAAALIP 168

[Close]
BLAST of HG10010816 vs. ExPASy Swiss-Prot
Match: Q9JKL4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Mus musculus OX=10090 GN=Ndufaf3 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.1e-15
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 0 

Query: 16  RSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGS 75
           R  RN RR   LS     L +      +I+L+ +     +    Y+  GFT+ G    G 
Sbjct: 24  RLWRNPRRGHRLSPADDELYQR----TRISLLQSEFPQAVYIDSYSSRGFTICGNRVFGP 83

Query: 76  LLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRYTETINPELREFIRSTG 135
            + +   ++ W+     +IT +S S+F ++ P  EI+++G G  TE ++P++ + +R  G
Sbjct: 84  CVLLPQTVVQWNVGSHQDITEESFSLFWMLEPRIEIVVVGTGNKTERLHPQVLQAMRQRG 143

Query: 136 MKLEAVDTRNAASTYNILNEEGRIVAAALLP 167
           + +E  DT NA +T+N L  EGR+  AAL+P
Sbjct: 144 IAVEVQDTPNACATFNFLCHEGRVTGAALIP 170

[Close]
BLAST of HG10010816 vs. ExPASy Swiss-Prot
Match: Q2HJI2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taurus OX=9913 GN=NDUFAF3 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.4e-15
Identity = 40/124 (32.26%), Postives = 67/124 (54.03%), Query Frame = 0 

Query: 43  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIF 102
           +I+L+       +    Y+  GF VNG    G    +   ++ W+   + +IT +S S+F
Sbjct: 46  RISLLQRESPLAMYIDSYSSRGFVVNGNRVFGPCALLPQSVVQWNVGSYQDITEESFSLF 105

Query: 103 QIVRPVPEILILGCGRYTETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAA 162
            ++ P  EI+++G G  TE + P +   +R  G+ +E  DT NA +T+N L  EGR+  A
Sbjct: 106 WMLEPRIEIVVVGTGDRTERLQPHVLRAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGA 165

Query: 163 ALLP 167
           AL+P
Sbjct: 166 ALIP 169

[Close]
BLAST of HG10010816 vs. ExPASy TrEMBL
Match: A0A5A7TES8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002470 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 159/171 (92.98%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLP+LIR+L+NDRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRY
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRYT 120
           TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITP SLSIFQIVRP+PEIL+LGCGRYT
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRPIPEILVLGCGRYT 120

Query: 121 ETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           E +NPELR+FIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of HG10010816 vs. ExPASy TrEMBL
Match: A0A1S3CB84 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo OX=3656 GN=LOC103498992 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 159/171 (92.98%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLP+LIR+L+NDRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRY
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRYT 120
           TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITP SLSIFQIVRP+PEIL+LGCGRYT
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRPIPEILVLGCGRYT 120

Query: 121 ETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           E +NPELR+FIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of HG10010816 vs. ExPASy TrEMBL
Match: A0A6J1HIQ3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita moschata OX=3662 GN=LOC111464400 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.1e-85
Identity = 158/171 (92.40%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRS+R DRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRYT 120
           TETGFTVNG+DYEGSLLCVGNLLMSWSPKKFSEITP+SLSIFQI+RP+PEIL+LGCGRY 
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120

Query: 121 ETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           E +NP+LR+FIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPQLRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of HG10010816 vs. ExPASy TrEMBL
Match: A0A6J1KD25 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita maxima OX=3661 GN=LOC111494507 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 156/171 (91.23%), Postives = 166/171 (97.08%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRS+R DRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ Y
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQWY 60

Query: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRYT 120
           TETGFTVNG+DYEGSLLCVG+LLMSWSPKKFSEITP+SLSIFQI+RP+PEIL+LGCGRY 
Sbjct: 61  TETGFTVNGLDYEGSLLCVGDLLMSWSPKKFSEITPESLSIFQIIRPIPEILVLGCGRYI 120

Query: 121 ETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           E +NPELR+FIRSTGMKLEAVD+RNA STYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDSRNATSTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of HG10010816 vs. ExPASy TrEMBL
Match: A0A6J1DND7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022818 OS=Momordica charantia OX=3673 GN=LOC111022818 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.7e-78
Identity = 152/177 (85.88%), Postives = 162/177 (91.53%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRSLR DRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIF------QIVRPVPEILIL 120
           TETGFTVNGVDYEGSLLCVGNLLMSWSP+KFSEIT +S  +F       ++  + EIL+L
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESXXLFLTWRLVYLLSLISEILLL 120

Query: 121 GCGRYTETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           GCG+YTE +NPELR+FIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 GCGKYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 177

[Close]
BLAST of HG10010816 vs. TAIR 10
Match: AT3G60150.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-70
Identity = 131/172 (76.16%), Postives = 151/172 (87.79%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRND-RRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQR 60
           MA RQKA+ATLP LI+S+RN+  ++P L   LPSLRRAFSLYDQINLIDNVPEDQLRFQ 
Sbjct: 1   MAVRQKAMATLPKLIQSMRNEVTKQPSL--VLPSLRRAFSLYDQINLIDNVPEDQLRFQE 60

Query: 61  YTETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRY 120
           + ET FTVNGV YEGSLLCVGNLLMSWSP+ FS+IT  SLSIFQ VRP+PE+LI+GCGRY
Sbjct: 61  FDETSFTVNGVKYEGSLLCVGNLLMSWSPRYFSDITTDSLSIFQTVRPIPELLIVGCGRY 120

Query: 121 TETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
              +NP++R+F++S GMKLE VD+RNAASTYNILNEEGRIVAAALLPYGV+S
Sbjct: 121 NHPLNPQVRQFVKSIGMKLETVDSRNAASTYNILNEEGRIVAAALLPYGVTS 170

[Close]
BLAST of HG10010816 vs. TAIR 10
Match: AT2G44525.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 253.8 bits (647), Expect = 9.6e-68
Identity = 128/172 (74.42%), Postives = 147/172 (85.47%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQR 60
           MA R K++ATLP LI+S+R  +  P  S P LPSLRRAFSLYDQINLIDNVPEDQLRFQ 
Sbjct: 1   MAMRLKSMATLPKLIQSMR--KEVPKHSNPVLPSLRRAFSLYDQINLIDNVPEDQLRFQE 60

Query: 61  YTETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPQSLSIFQIVRPVPEILILGCGRY 120
           + +T FTVNGV YEGSLLCVGNLLMSWSP+KFSEIT  SLSIFQ VRP+PE+LI+GCGR 
Sbjct: 61  FNDTSFTVNGVKYEGSLLCVGNLLMSWSPRKFSEITTDSLSIFQTVRPIPELLIVGCGRD 120

Query: 121 TETINPELREFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
              + PE+R+F++S GMKLE VD+RNAASTYNILNEEGR+VAAALLPYGV+S
Sbjct: 121 IHPVTPEVRQFVKSLGMKLETVDSRNAASTYNILNEEGRVVAAALLPYGVTS 170

The following BLAST results are available for this feature:
BLAST of HG10010816 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906819.16.0e-8897.08NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benin... [more]
XP_023513625.14.8e-8592.98NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur... [more]
XP_008460070.14.8e-8592.98PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-... [more]
XP_031743290.16.2e-8593.57NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucum... [more]
XP_022964366.11.1e-8492.40NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur... [more]
BLAST of HG10010816 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6DFN16.4e-1635.78NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus ... [more]
O087761.1e-1533.06NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus n... [more]
A1L1F11.9e-1536.45NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Danio re... [more]
Q9JKL44.1e-1531.13NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Mus musc... [more]
Q2HJI25.4e-1532.26NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taur... [more]
BLAST of HG10010816 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TES82.3e-8592.98NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ... [more]
A0A1S3CB842.3e-8592.98NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ... [more]
A0A6J1HIQ35.1e-8592.40NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit... [more]
A0A6J1KD251.3e-8391.23NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit... [more]
A0A6J1DND72.7e-7885.88LOW QUALITY PROTEIN: uncharacterized protein LOC111022818 OS=Momordica charantia... [more]
BLAST of HG10010816 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G60150.11.2e-7076.16Protein of unknown function (DUF498/DUF598) [more]
AT2G44525.19.6e-6874.42Protein of unknown function (DUF498/DUF598) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036748MTH938-like superfamilyGENE3D3.40.1230.10coord: 41..167
e-value: 1.9E-34
score: 120.0
IPR036748MTH938-like superfamilySUPERFAMILY64076MTH938-likecoord: 44..167
IPR007523NDUFAF3/Mth938 domain-containing proteinPFAMPF04430DUF498coord: 58..165
e-value: 8.0E-32
score: 109.5
IPR007523NDUFAF3/Mth938 domain-containing proteinPANTHERPTHR21192NUCLEAR PROTEIN E3-3coord: 1..171
NoneNo IPR availablePANTHERPTHR21192:SF4BNAC04G03830D PROTEINcoord: 1..171
IPR034095NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3CDDcd05125Mth938_2P1-likecoord: 60..168
e-value: 3.7919E-44
score: 140.027

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010816.1HG10010816.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032981 mitochondrial respiratory chain complex I assembly
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005634 nucleus