HG10010471 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTCTATCAACGTTGACGCATTAGATATTTTCTTAGATTTAATCACCCAATTCACTGAAATTATGAACGATGAAATCTGCCTGAAAATCACACCGTCGGAGTTCTCGATAATCGCTCGGTACGGGTGCCCTCTTTTCTTTGCAATGATGGTTATACCGCCTGTATTCTTCCCCGAGTATTCCGTTGATCGGAATCACAATTCAAAGATTTCCCTCCAGTACTTGCACAATGCTGTCTTGGAAGCTGAAAGCTTTTCTTCTTCAATGACCATGCAACTTCAAGAACAAGAAAATACTATACACCTTATATTTGAGCCTTCAAGTTAGTATACATAATACCATTTTTCCTTTGTTTCTTCTCTTCAAAAAATTAATCTTGATTCTTTTTTTGGTTTTTTTTTGTTTTTTTGTCATTTCTTGATTCTTTTATGCATTCCGAAGAATTTGTTTACGTTTGATAATTGAACGTAGGGCCAATTTGTGTGGATTTTTGTTTTCATAAAATATGATTCTTGTAAACTAAATTTATGTATAACTTTGTCCTTAATTTTTCAGGCCATTGGAAATCGATTCTTGAAAATTAAAACTCATCGCATCAAATCATATCAATTTGTTTATGAACATATTAGATCATTCAACACTGCTATTCTGTGTGGATTCTTGTCTTCATAAAATTTGAATCTTGTTTACGTAAAATTTTGTCGAGGCATTTTTTTAGAGAAAGATATGATAGGATATGAGGGTCAGTAGGTAATTTTTTGAGCATTGGAAATCGATTTTCTTGCAATTTCTTTAATTAAAAGCCCACAATATCATTTTTTTTACGAACATCATATCAAATACTTAAAAAGGATGTTTTATACCTCAATCTTGCTTGCTTTAGAATTGGGGAATTTTTAAAATTAAAAAAAATAAGGGAAACTATTTGCACAAAATAACAAAATGTTTAAATAGTTGTGATAGACGCTGATAGAAGTCTATCAAGGTCTATCAATAATATAGATGCTGATAGAATTCTATCAATGTCTATCAATTTTTTTTTTTTGCTATTTTCCGTAAATAATTTGACATTTTTTCTATTTGTGAAAATTTCCCTTTTCACATGTTACCGATTAATTATATATCATTTTATTCTTGTATTTTGAATTTCATTACATTTTAATTAATTCTTGTACTTCTACTAAATCTAACATTATTATTATTACTATTATTATATAACTTTCTAGTTTTATTTTAAGGGCCTTCTGCACTACCATTGCATCATGAATTGAGATTCTTGCCTATGGAAGATTGGTCTCTTGGCGAAGTTGCCTTATGTGGTGATAAAATTTTATCCGTTGAGGCAGATATGTATAGCGATATTATTACAACATTTTCTGTCTACAATGAAGCTGATTCAAGTAATGCAATAATTCTTCTCTCATTTTTCATAAATTTTACTTCTTTTTTTTTTTTTAATAAAAAATATGGTGTTTATATCTTAGCTTGCTAAAATCTTCTTTCATTTCTCACAGTTTTGATTACTTTAGTGGGTTCTCAAGCCACCTTCTCTGTCGTTCCATTTGATCACGAGATAACTGTTACCCAAGAAGTATGTTTTGTGAACTTTGTGTAA ATGTTCTCTATCAACGTTGACGCATTAGATATTTTCTTAGATTTAATCACCCAATTCACTGAAATTATGAACGATGAAATCTGCCTGAAAATCACACCGTCGGAGTTCTCGATAATCGCTCGGTACGGGTGCCCTCTTTTCTTTGCAATGATGGTTATACCGCCTGTATTCTTCCCCGAGTATTCCGTTGATCGGAATCACAATTCAAAGATTTCCCTCCAGTACTTGCACAATGCTGTCTTGGAAGCTGAAAGCTTTTCTTCTTCAATGACCATGCAACTTCAAGAACAAGAAAATACTATACACCTTATATTTGAGCCTTCAAGGCCTTCTGCACTACCATTGCATCATGAATTGAGATTCTTGCCTATGGAAGATTGGTCTCTTGGCGAAGTTGCCTTATGTGGTGATAAAATTTTATCCGTTGAGGCAGATATGTATAGCGATATTATTACAACATTTTCTGTCTACAATGAAGCTGATTCAATTTTGATTACTTTAGTGGGTTCTCAAGCCACCTTCTCTGTCGTTCCATTTGATCACGAGATAACTGTTACCCAAGAAGTATGTTTTGTGAACTTTGTGTAA ATGTTCTCTATCAACGTTGACGCATTAGATATTTTCTTAGATTTAATCACCCAATTCACTGAAATTATGAACGATGAAATCTGCCTGAAAATCACACCGTCGGAGTTCTCGATAATCGCTCGGTACGGGTGCCCTCTTTTCTTTGCAATGATGGTTATACCGCCTGTATTCTTCCCCGAGTATTCCGTTGATCGGAATCACAATTCAAAGATTTCCCTCCAGTACTTGCACAATGCTGTCTTGGAAGCTGAAAGCTTTTCTTCTTCAATGACCATGCAACTTCAAGAACAAGAAAATACTATACACCTTATATTTGAGCCTTCAAGGCCTTCTGCACTACCATTGCATCATGAATTGAGATTCTTGCCTATGGAAGATTGGTCTCTTGGCGAAGTTGCCTTATGTGGTGATAAAATTTTATCCGTTGAGGCAGATATGTATAGCGATATTATTACAACATTTTCTGTCTACAATGAAGCTGATTCAATTTTGATTACTTTAGTGGGTTCTCAAGCCACCTTCTCTGTCGTTCCATTTGATCACGAGATAACTGTTACCCAAGAAGTATGTTTTGTGAACTTTGTGTAA MFSINVDALDIFLDLITQFTEIMNDEICLKITPSEFSIIARYGCPLFFAMMVIPPVFFPEYSVDRNHNSKISLQYLHNAVLEAESFSSSMTMQLQEQENTIHLIFEPSRPSALPLHHELRFLPMEDWSLGEVALCGDKILSVEADMYSDIITTFSVYNEADSILITLVGSQATFSVVPFDHEITVTQEVCFVNFV Homology
BLAST of HG10010471 vs. NCBI nr
Match: XP_031736681.1 (uncharacterized protein LOC116402062 [Cucumis sativus] >XP_031741497.1 uncharacterized protein LOC116403863 [Cucumis sativus]) HSP 1 Score: 173.7 bits (439), Expect = 1.5e-39 Identity = 95/189 (50.26%), Postives = 129/189 (68.25%), Query Frame = 0
BLAST of HG10010471 vs. NCBI nr
Match: KGN45637.1 (hypothetical protein Csa_005027 [Cucumis sativus]) HSP 1 Score: 155.2 bits (391), Expect = 5.7e-34 Identity = 84/163 (51.53%), Postives = 113/163 (69.33%), Query Frame = 0
BLAST of HG10010471 vs. NCBI nr
Match: KAA0047513.1 (hypothetical protein E6C27_scaffold498G001420 [Cucumis melo var. makuwa]) HSP 1 Score: 131.7 bits (330), Expect = 6.7e-27 Identity = 73/141 (51.77%), Postives = 101/141 (71.63%), Query Frame = 0
BLAST of HG10010471 vs. NCBI nr
Match: KGN61523.1 (hypothetical protein Csa_006491 [Cucumis sativus]) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-26 Identity = 87/195 (44.62%), Postives = 105/195 (53.85%), Query Frame = 0
BLAST of HG10010471 vs. NCBI nr
Match: TYK26483.1 (hypothetical protein E5676_scaffold313G00490 [Cucumis melo var. makuwa]) HSP 1 Score: 130.6 bits (327), Expect = 1.5e-26 Identity = 73/140 (52.14%), Postives = 100/140 (71.43%), Query Frame = 0
BLAST of HG10010471 vs. ExPASy TrEMBL
Match: A0A0A0KB76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002310 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 2.8e-34 Identity = 84/163 (51.53%), Postives = 113/163 (69.33%), Query Frame = 0
BLAST of HG10010471 vs. ExPASy TrEMBL
Match: A0A5A7TVD7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001420 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 3.3e-27 Identity = 73/141 (51.77%), Postives = 101/141 (71.63%), Query Frame = 0
BLAST of HG10010471 vs. ExPASy TrEMBL
Match: A0A0A0LIE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G155090 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 5.6e-27 Identity = 87/195 (44.62%), Postives = 105/195 (53.85%), Query Frame = 0
BLAST of HG10010471 vs. ExPASy TrEMBL
Match: A0A5D3DSC2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00490 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 7.3e-27 Identity = 73/140 (52.14%), Postives = 100/140 (71.43%), Query Frame = 0
BLAST of HG10010471 vs. ExPASy TrEMBL
Match: A0A5D3DZ07 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1810G00070 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 4.4e-16 Identity = 63/189 (33.33%), Postives = 98/189 (51.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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