HG10010372 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010372
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ethylene-responsive transcription factor RAP2-3-like
Location	Chr06: 21588681 .. 21589854 (+)
RNA-Seq Expression	HG10010372
Synteny	HG10010372

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCGGTGGTGCCATCATCTCTGATTTTATAGAAAAAAAGCGAACTCGGAAGCTTAGCAATGAATCTCTCTGGTCCCACATCGACCCTTTCTCCGATCTCCTTGGCCTCAATTATTCGCCTGGTAGGTAATTTCATTTCTACTTATTATTATTTTATTTTTACTTGTTCAAATTTTTTTTTATCATAGCTTTATAATTGTTTAAGTGTGTATTAATTTATAAGAAAGAAATAAAGATGTTAAAATGAGTTTAGTTGAATGGTAATGGATACGAACTTCCTCCCTATAAGTCATAGGTTGATTTCAGTTGATATTTTATTCAAATAATTTGTAAAAGAAATACGACTTTTTAGGAAAATTTTCACAAATAGAAAAAATGTGATAAACATTAATAAACATCTATCAGCATCGAGTGATAGACTTCTATGGTCTATTTTATGTAAATAATTTTCTTATTTTTTTTATTTTTAAAAGATTCATTTTTTATAAGAAAAATTGATTAATTTATGGAGAGATTAAAAAAATGGAGAAGGGAATGGAAATTTCTATCGTCATGGGTATTGAAGTGTGATTGGTGACTGATTTGTAGTGAAAAGTGAGAAACCTAAGAAAAGAGACCGAGCTACGGCGGCGGAGGCGGTGGCGGTGGAGAAGACTCCAAAAACTCGGAAAAATTTGTACAGAGGAATCCGGCAACGGCCGTGGGGAAAATGGGCGGCGGAGATTCGGGACCCACAAAAAGGAGTTCGAGTTTGGCTCGGCACTTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCGGCCAAACGGATCCGAGGAGAAAAAGCCAAGCTCAACTTTGCTCCGGCACCGTCGTTTTCGCCGCCGTTACCGGCGCCTCAGCCTCAATTTCCGGTCAAAAAGCGGTGCGTTCTCCCCGAGTTGATTCAAGGTGGCTTCAGCACCACCGGTCCGCCTCCGTGTACACGTGCGGATAACTCGTGTGACAGGGACGAGTTTTACTACGGCGAGGAATTGGCGAGTTTGAGATCCTTCTTGGGTCTGGATAGCGAGGAGCAACAACCGAGTCAACTCAGTGGAAATGGCGAGTTTGAGCGAGTTGATGTAGACCTTTGGATGATGGACGACATGTCGTTGAATGAGCAGAAATTGAGTCAGCTGGTGTAA

mRNA sequence

ATGTGCGGTGGTGCCATCATCTCTGATTTTATAGAAAAAAAGCGAACTCGGAAGCTTAGCAATGAATCTCTCTGGTCCCACATCGACCCTTTCTCCGATCTCCTTGGCCTCAATTATTCGCCTGTGAAAAGTGAGAAACCTAAGAAAAGAGACCGAGCTACGGCGGCGGAGGCGGTGGCGGTGGAGAAGACTCCAAAAACTCGGAAAAATTTGTACAGAGGAATCCGGCAACGGCCGTGGGGAAAATGGGCGGCGGAGATTCGGGACCCACAAAAAGGAGTTCGAGTTTGGCTCGGCACTTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCGGCCAAACGGATCCGAGGAGAAAAAGCCAAGCTCAACTTTGCTCCGGCACCGTCGTTTTCGCCGCCGTTACCGGCGCCTCAGCCTCAATTTCCGGTCAAAAAGCGGTGCGTTCTCCCCGAGTTGATTCAAGGTGGCTTCAGCACCACCGGTCCGCCTCCGTGTACACGTGCGGATAACTCGTGTGACAGGGACGAGTTTTACTACGGCGAGGAATTGGCGAGTTTGAGATCCTTCTTGGGTCTGGATAGCGAGGAGCAACAACCGAGTCAACTCAGTGGAAATGGCGAGTTTGAGCGAGTTGATGTAGACCTTTGGATGATGGACGACATGTCGTTGAATGAGCAGAAATTGAGTCAGCTGGTGTAA

Coding sequence (CDS)

ATGTGCGGTGGTGCCATCATCTCTGATTTTATAGAAAAAAAGCGAACTCGGAAGCTTAGCAATGAATCTCTCTGGTCCCACATCGACCCTTTCTCCGATCTCCTTGGCCTCAATTATTCGCCTGTGAAAAGTGAGAAACCTAAGAAAAGAGACCGAGCTACGGCGGCGGAGGCGGTGGCGGTGGAGAAGACTCCAAAAACTCGGAAAAATTTGTACAGAGGAATCCGGCAACGGCCGTGGGGAAAATGGGCGGCGGAGATTCGGGACCCACAAAAAGGAGTTCGAGTTTGGCTCGGCACTTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCGGCCAAACGGATCCGAGGAGAAAAAGCCAAGCTCAACTTTGCTCCGGCACCGTCGTTTTCGCCGCCGTTACCGGCGCCTCAGCCTCAATTTCCGGTCAAAAAGCGGTGCGTTCTCCCCGAGTTGATTCAAGGTGGCTTCAGCACCACCGGTCCGCCTCCGTGTACACGTGCGGATAACTCGTGTGACAGGGACGAGTTTTACTACGGCGAGGAATTGGCGAGTTTGAGATCCTTCTTGGGTCTGGATAGCGAGGAGCAACAACCGAGTCAACTCAGTGGAAATGGCGAGTTTGAGCGAGTTGATGTAGACCTTTGGATGATGGACGACATGTCGTTGAATGAGCAGAAATTGAGTCAGCTGGTGTAA

Protein sequence

MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAEAVAVEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPSFSPPLPAPQPQFPVKKRCVLPELIQGGFSTTGPPPCTRADNSCDRDEFYYGEELASLRSFLGLDSEEQQPSQLSGNGEFERVDVDLWMMDDMSLNEQKLSQLV

Homology

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BLAST of HG10010372 vs. NCBI nr
Match: XP_008458405.1 (PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis melo])

HSP 1 Score: 403.3 bits (1035), Expect = 1.4e-108
Identity = 202/237 (85.23%), Postives = 213/237 (89.87%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAE--A 60
           MCGGAIISDFIEK+RT KL+NESLWSHIDPFSDLLGLNYS VK+EKPKKRDR+TAAE  A
Sbjct: 20  MCGGAIISDFIEKRRTCKLNNESLWSHIDPFSDLLGLNYSSVKTEKPKKRDRSTAAEAVA 79

Query: 61  VAVEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 120
           VAVEKT K RKNLYRGIRQRPWGKWAAEIRDP+KGVRVWLGTFNTAEEAARAYDEAAKRI
Sbjct: 80  VAVEKTRKVRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRI 139

Query: 121 RGEKAKLNFAPAPSFSPPLPAPQPQFPVKKRCVLPELIQGGFSTTGPPPCTRADNSCDRD 180
           RG KAKLNFAPA    PP P  QPQ PVKK+CVLPEL  GGF+TT  PPCTRAD+SCD +
Sbjct: 140 RGVKAKLNFAPA----PPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPPCTRADSSCDSE 199

Query: 181 EFYYGEELASLRSFLGLDSEEQQPSQLSGNGEFERVDVDLWMMDDMSLNEQKLSQLV 236
           E YYGEELASLRSFLGLD EEQQPSQL GNGEFERVD+DLWMMDDMSLNE+K SQLV
Sbjct: 200 ELYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEEKFSQLV 252

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BLAST of HG10010372 vs. NCBI nr
Match: XP_038876065.1 (ethylene-responsive transcription factor RAP2-3-like [Benincasa hispida])

HSP 1 Score: 401.4 bits (1030), Expect = 5.5e-108
Identity = 203/237 (85.65%), Postives = 211/237 (89.03%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAEA-- 60
           MCGGAIISDFIEKKRTRKL+NESLWSHIDPFSDLL LNYSPVK+E+PKKRDRATAAEA  
Sbjct: 45  MCGGAIISDFIEKKRTRKLTNESLWSHIDPFSDLLALNYSPVKTEEPKKRDRATAAEAVG 104

Query: 61  VAVEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 120
           VAVEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI
Sbjct: 105 VAVEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 164

Query: 121 RGEKAKLNFAPAPSFSPPLPAPQPQFPVKKRCVLPELIQGGFSTTGPPPCTRADNSCDRD 180
           RGEKAKLNFAPAP  S PLPA Q Q PVKKRCV+PE  +GGF+TTGPPP       CD D
Sbjct: 165 RGEKAKLNFAPAPPSSRPLPAAQLQSPVKKRCVVPESTRGGFNTTGPPP-------CDSD 224

Query: 181 EFYYGEELASLRSFLGLDSEEQQPSQLSGNGEFERVDVDLWMMDDMSLNEQKLSQLV 236
           EFYYG+ELASLRSFLGLD EEQQP QLSGNGE E VDV  WMMDDMS+NEQK SQLV
Sbjct: 225 EFYYGQELASLRSFLGLDCEEQQPCQLSGNGELEPVDVGFWMMDDMSMNEQKFSQLV 274

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BLAST of HG10010372 vs. NCBI nr
Match: KGN47418.1 (hypothetical protein Csa_023005 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 7.4e-105
Identity = 194/235 (82.55%), Postives = 209/235 (88.94%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAEAVA 60
           MCGGAIISDFIEKKRT KL+NESLWSHIDPFSDLLGLNYS VK+E PKKR+R+TAAEAVA
Sbjct: 1   MCGGAIISDFIEKKRTCKLNNESLWSHIDPFSDLLGLNYSSVKTETPKKRNRSTAAEAVA 60

Query: 61  VEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRG 120
           VEKT K RKN+YRGIRQRPWGKWAAEIRDP+KGVRVWLGTFNTAEEAARAYDEAAKRIRG
Sbjct: 61  VEKTRKARKNIYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRG 120

Query: 121 EKAKLNFAPAPSFSPPLPAPQPQFPVKKRCVLPELIQGGFSTTGPPPCTRADNSCDRDEF 180
           EKAKLNFAPA    PP  A Q Q PVK +CV+PE    G +TTG PPCTRAD+SCD +E 
Sbjct: 121 EKAKLNFAPA----PPSLAAQRQTPVKMQCVVPEFTPSGLNTTGSPPCTRADSSCDSEEL 180

Query: 181 YYGEELASLRSFLGLDSEEQQPSQLSGNGEFERVDVDLWMMDDMSLNEQKLSQLV 236
           YYGEELASLRSFLGLDSEEQQ S+L GNGEFERVD+D+WMMDDMSLNEQK SQ+V
Sbjct: 181 YYGEELASLRSFLGLDSEEQQASELGGNGEFERVDLDVWMMDDMSLNEQKFSQMV 231

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BLAST of HG10010372 vs. NCBI nr
Match: XP_004153075.3 (ethylene-responsive transcription factor RAP2-3 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 7.4e-105
Identity = 194/235 (82.55%), Postives = 209/235 (88.94%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAEAVA 60
           MCGGAIISDFIEKKRT KL+NESLWSHIDPFSDLLGLNYS VK+E PKKR+R+TAAEAVA
Sbjct: 20  MCGGAIISDFIEKKRTCKLNNESLWSHIDPFSDLLGLNYSSVKTETPKKRNRSTAAEAVA 79

Query: 61  VEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRG 120
           VEKT K RKN+YRGIRQRPWGKWAAEIRDP+KGVRVWLGTFNTAEEAARAYDEAAKRIRG
Sbjct: 80  VEKTRKARKNIYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRG 139

Query: 121 EKAKLNFAPAPSFSPPLPAPQPQFPVKKRCVLPELIQGGFSTTGPPPCTRADNSCDRDEF 180
           EKAKLNFAPA    PP  A Q Q PVK +CV+PE    G +TTG PPCTRAD+SCD +E 
Sbjct: 140 EKAKLNFAPA----PPSLAAQRQTPVKMQCVVPEFTPSGLNTTGSPPCTRADSSCDSEEL 199

Query: 181 YYGEELASLRSFLGLDSEEQQPSQLSGNGEFERVDVDLWMMDDMSLNEQKLSQLV 236
           YYGEELASLRSFLGLDSEEQQ S+L GNGEFERVD+D+WMMDDMSLNEQK SQ+V
Sbjct: 200 YYGEELASLRSFLGLDSEEQQASELGGNGEFERVDLDVWMMDDMSLNEQKFSQMV 250

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BLAST of HG10010372 vs. NCBI nr
Match: KAE8647095.1 (hypothetical protein Csa_021726 [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 1.6e-94
Identity = 177/217 (81.57%), Postives = 192/217 (88.48%), Query Frame = 0


Query: 19  LSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAEAVAVEKTPKTRKNLYRGIRQR 78
           L+NESLWSHIDPFSDLLGLNYS VK+E PKKR+R+TAAEAVAVEKT K RKN+YRGIRQR
Sbjct: 25  LTNESLWSHIDPFSDLLGLNYSSVKTETPKKRNRSTAAEAVAVEKTRKARKNIYRGIRQR 84

Query: 79  PWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPAPSFSPPLP 138
           PWGKWAAEIRDP+KGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPA    PP  
Sbjct: 85  PWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPA----PPSL 144

Query: 139 APQPQFPVKKRCVLPELIQGGFSTTGPPPCTRADNSCDRDEFYYGEELASLRSFLGLDSE 198
           A Q Q PVK +CV+PE    G +TTG PPCTRAD+SCD +E YYGEELASLRSFLGLDSE
Sbjct: 145 AAQRQTPVKMQCVVPEFTPSGLNTTGSPPCTRADSSCDSEELYYGEELASLRSFLGLDSE 204

Query: 199 EQQPSQLSGNGEFERVDVDLWMMDDMSLNEQKLSQLV 236
           EQQ S+L GNGEFERVD+D+WMMDDMSLNEQK SQ+V
Sbjct: 205 EQQASELGGNGEFERVDLDVWMMDDMSLNEQKFSQMV 237

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BLAST of HG10010372 vs. ExPASy Swiss-Prot
Match: P42736 (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 9.9e-44
Identity = 112/248 (45.16%), Postives = 148/248 (59.68%), Query Frame = 0


Query: 1   MCGGAIISDF---IEKKRTRKLSNESLWSHIDPFS--DLLGLNYSPVK---SEKPKKRDR 60
           MCGGAIISD+   + K + RKL+ E LWS +D  +  D  G  YS  K   + +   ++ 
Sbjct: 1   MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGF-YSTSKLHPTNQVNVKEE 60

Query: 61  ATAAEAVAVEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYD 120
           A   E        + RKN+YRGIR+RPWGKWAAEIRDP+KGVRVWLGTFNTAEEAA AYD
Sbjct: 61  AVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYD 120

Query: 121 EAAKRIRGEKAKLNF-----APAPSFSPPLPAPQ--PQFPVKKRCVLPELIQGGFSTTGP 180
            AAK+IRG+KAKLNF      P P+++PP  +P+   Q P KK CV+ +        + P
Sbjct: 121 VAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSFP 180

Query: 181 PPCTRADNSCDRDEFYYG--------EELASLRSFLGLD-SEEQQPSQLSGNGEFERVDV 225
             C    N  +     YG        ++++SL SFL LD +  +QPSQL  +      +V
Sbjct: 181 VECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAEQPSQLDESVS----EV 240

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BLAST of HG10010372 vs. ExPASy Swiss-Prot
Match: O22259 (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.4e-28
Identity = 75/128 (58.59%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAEAVA 60
           MCGGAIISDFI             WS  +     LG     V S K +K        +V+
Sbjct: 1   MCGGAIISDFI-------------WSKSESEPSQLG----SVSSRKKRK------PVSVS 60

Query: 61  VEKTPK-TRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIR 120
            E+  K  RKNLYRGIRQRPWGKWAAEIRDP KGVRVWLGTF TA+EAARAYD AA +IR
Sbjct: 61  EERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIR 105

Query: 121 GEKAKLNF 128
           G KAKLNF
Sbjct: 121 GRKAKLNF 105

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BLAST of HG10010372 vs. ExPASy Swiss-Prot
Match: Q8H0T5 (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 GN=ERF073 PE=1 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 5.8e-28
Identity = 70/134 (52.24%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFS----DLLGLNYSPVKSEKP---KKRDRA 60
           MCGGA+ISD+I  ++  + S +S W     F     D  G N+  ++S++P       + 
Sbjct: 1   MCGGAVISDYIAPEKIARSSGKSSWRSNGVFDCSIYDFDG-NFDELESDEPFVFSSTHKH 60

Query: 61  TAAEAVAVEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDE 120
            A+ + +  K  K + + Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNTAEEAARAYD 
Sbjct: 61  HASGSASDGK--KKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDL 120

Query: 121 AAKRIRGEKAKLNF 128
            AKRIRG KAKLNF
Sbjct: 121 EAKRIRGAKAKLNF 131

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BLAST of HG10010372 vs. ExPASy Swiss-Prot
Match: Q9SSA8 (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702 GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 78/180 (43.33%), Postives = 96/180 (53.33%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLW----------------------------------- 60
           MCGGAIISDFI   R+R++++E +W                                   
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 61  --SHIDPFSDL-LGLNYSPVK----SEKPKKRDRATAAEAV-----------AVEKTPKT 120
             S ID   D  +G  ++ VK    +  PK    A A  +V           A +   + 
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRK 120

Query: 121 RKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNF 128
           RKN YRGIRQRPWGKWAAEIRDP++G R+WLGTF TAEEAARAYD AA+RIRG KAK+NF
Sbjct: 121 RKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF 180

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BLAST of HG10010372 vs. ExPASy Swiss-Prot
Match: Q9LUM4 (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-26
Identity = 78/183 (42.62%), Postives = 93/183 (50.82%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHI---------------------DPF-------- 60
           MCGGAIISDFI   R+ +++NE +W  +                     D F        
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 61  ---------SDLLGLNYSP---VKSEKP--------------KKRDRATAAEAVAVEKTP 120
                     D + +N  P     + KP                  + T   A   EK+ 
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSS 120

Query: 121 K-TRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAK 128
           K  RKN YRGIRQRPWGKWAAEIRDP+KG R WLGTF+TAEEAARAYD AA+RIRG KAK
Sbjct: 121 KRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAK 180

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BLAST of HG10010372 vs. ExPASy TrEMBL
Match: A0A1S3C7W9 (ethylene-responsive transcription factor RAP2-3-like OS=Cucumis melo OX=3656 GN=LOC103497827 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 7.0e-109
Identity = 202/237 (85.23%), Postives = 213/237 (89.87%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAE--A 60
           MCGGAIISDFIEK+RT KL+NESLWSHIDPFSDLLGLNYS VK+EKPKKRDR+TAAE  A
Sbjct: 20  MCGGAIISDFIEKRRTCKLNNESLWSHIDPFSDLLGLNYSSVKTEKPKKRDRSTAAEAVA 79

Query: 61  VAVEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 120
           VAVEKT K RKNLYRGIRQRPWGKWAAEIRDP+KGVRVWLGTFNTAEEAARAYDEAAKRI
Sbjct: 80  VAVEKTRKVRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRI 139

Query: 121 RGEKAKLNFAPAPSFSPPLPAPQPQFPVKKRCVLPELIQGGFSTTGPPPCTRADNSCDRD 180
           RG KAKLNFAPA    PP P  QPQ PVKK+CVLPEL  GGF+TT  PPCTRAD+SCD +
Sbjct: 140 RGVKAKLNFAPA----PPSPTAQPQTPVKKQCVLPELTPGGFNTTDSPPCTRADSSCDSE 199

Query: 181 EFYYGEELASLRSFLGLDSEEQQPSQLSGNGEFERVDVDLWMMDDMSLNEQKLSQLV 236
           E YYGEELASLRSFLGLD EEQQPSQL GNGEFERVD+DLWMMDDMSLNE+K SQLV
Sbjct: 200 ELYYGEELASLRSFLGLDGEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEEKFSQLV 252

[Close]

BLAST of HG10010372 vs. ExPASy TrEMBL
Match: A0A0A0KD18 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318160 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.6e-105
Identity = 194/235 (82.55%), Postives = 209/235 (88.94%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAEAVA 60
           MCGGAIISDFIEKKRT KL+NESLWSHIDPFSDLLGLNYS VK+E PKKR+R+TAAEAVA
Sbjct: 1   MCGGAIISDFIEKKRTCKLNNESLWSHIDPFSDLLGLNYSSVKTETPKKRNRSTAAEAVA 60

Query: 61  VEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRG 120
           VEKT K RKN+YRGIRQRPWGKWAAEIRDP+KGVRVWLGTFNTAEEAARAYDEAAKRIRG
Sbjct: 61  VEKTRKARKNIYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRG 120

Query: 121 EKAKLNFAPAPSFSPPLPAPQPQFPVKKRCVLPELIQGGFSTTGPPPCTRADNSCDRDEF 180
           EKAKLNFAPA    PP  A Q Q PVK +CV+PE    G +TTG PPCTRAD+SCD +E 
Sbjct: 121 EKAKLNFAPA----PPSLAAQRQTPVKMQCVVPEFTPSGLNTTGSPPCTRADSSCDSEEL 180

Query: 181 YYGEELASLRSFLGLDSEEQQPSQLSGNGEFERVDVDLWMMDDMSLNEQKLSQLV 236
           YYGEELASLRSFLGLDSEEQQ S+L GNGEFERVD+D+WMMDDMSLNEQK SQ+V
Sbjct: 181 YYGEELASLRSFLGLDSEEQQASELGGNGEFERVDLDVWMMDDMSLNEQKFSQMV 231

[Close]

BLAST of HG10010372 vs. ExPASy TrEMBL
Match: A0A6J1CA63 (ethylene-responsive transcription factor RAP2-3-like OS=Momordica charantia OX=3673 GN=LOC111009718 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 8.3e-86
Identity = 174/246 (70.73%), Postives = 191/246 (77.64%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAEAVA 60
           MCGGAIISDFIEKKR+RK SN  LWS IDPFSDLLGL++S VKSEKP+KR+R+ A  A  
Sbjct: 1   MCGGAIISDFIEKKRSRKFSNGDLWSEIDPFSDLLGLDFSSVKSEKPQKRERSPAVAAEG 60

Query: 61  VEKTP-KTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIR 120
           +E  P KTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTF+TAEEAARAYDEAAKRIR
Sbjct: 61  IELKPRKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFSTAEEAARAYDEAAKRIR 120

Query: 121 GEKAKLNFAPAPSFSPPLPAPQPQFPVKKRCVLPELIQGGFSTTGPPPCTRADNSCDRDE 180
           GEKAKLNFA         PA QPQ P KKRCVLPEL + G +TTGPP  +R  NS + D 
Sbjct: 121 GEKAKLNFA---------PAAQPQAPAKKRCVLPELTREGLNTTGPPTRSRTSNSYN-DG 180

Query: 181 FYYGEELAS----------LRSFLGLDSEEQQPSQLSGNGEFERVDVDLWMMDDMSLNEQ 236
            YYG+ELAS          L SFLGLD E+QQ SQL G+ EF+RV VDLWMMDD SLN Q
Sbjct: 181 IYYGDELASGFELKEQISNLTSFLGLDGEDQQLSQLGGSDEFDRVVVDLWMMDDRSLNRQ 236

[Close]

BLAST of HG10010372 vs. ExPASy TrEMBL
Match: A0A6J1KF31 (ethylene-responsive transcription factor RAP2-3 OS=Cucurbita maxima OX=3661 GN=LOC111494435 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 9.9e-79
Identity = 166/239 (69.46%), Postives = 182/239 (76.15%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAEAVA 60
           MCGGA+IS  IEKKR RKLSN SLW   D FSDLLGL+Y  +K+E P+K+ RATA  A  
Sbjct: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETPQKKCRATAETAAV 60

Query: 61  --VEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 120
              EKT K RKN+YRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI
Sbjct: 61  PEPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 120

Query: 121 RGEKAKLNFAPAPSFSPPLPAPQPQFPVKKRCVLPELIQGGFSTTGPPPC-TRADNSCDR 180
           RGEKAKLNFAP P    PLP  QP  P KKRCV  EL    FS+T   P  TR +NSC+ 
Sbjct: 121 RGEKAKLNFAPRPQ---PLPVSQP--PAKKRCVAHELTPDCFSSTSSAPASTRVNNSCEI 180

Query: 181 DEFYYGEELASLRSFLGLD-SEEQQPSQLSGNGEFERVDVDLWMMDDMSLNEQKLSQLV 236
           D  YYGEELASLRSFL LD  EEQQPSQ+ G+ EF +  V+LWMMDD SLNE+K S +V
Sbjct: 181 DGLYYGEELASLRSFLDLDFEEEQQPSQVGGSDEFGQA-VELWMMDDPSLNEEKFSSVV 233

[Close]

BLAST of HG10010372 vs. ExPASy TrEMBL
Match: A0A6J1ER95 (ethylene-responsive transcription factor RAP2-3 OS=Cucurbita moschata OX=3662 GN=LOC111436844 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.2e-76
Identity = 161/237 (67.93%), Postives = 179/237 (75.53%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAEAVA 60
           MCGG++IS  IEKKR RKL N SLW   D FSDLLGL+Y  +K+E  +K  RATA     
Sbjct: 1   MCGGSLISGIIEKKRGRKLRNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVP--E 60

Query: 61  VEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRG 120
            EKT K RKN+YRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRG
Sbjct: 61  PEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRG 120

Query: 121 EKAKLNFAPAPSFSPPLPAPQPQFPVKKRCVLPELIQGGFSTTGPPPC-TRADNSCDRDE 180
           EKAKLNFAP P    PLP  QP  P KKRCV  EL    FS+T P P  TR +NSC+ D 
Sbjct: 121 EKAKLNFAPRPQ---PLPVSQP--PAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDG 180

Query: 181 FYYGEELASLRSFLGLD-SEEQQPSQLSGNGEFERVDVDLWMMDDMSLNEQKLSQLV 236
            YYGEELASLRSFL LD  EEQ+PSQ+ G+ EF +  V+LWMMDD SLNE+K  ++V
Sbjct: 181 LYYGEELASLRSFLDLDFEEEQEPSQVGGSDEFGQA-VELWMMDDPSLNEEKFGEVV 229

[Close]

BLAST of HG10010372 vs. TAIR 10
Match: AT3G16770.1 (ethylene-responsive element binding protein )

HSP 1 Score: 178.3 bits (451), Expect = 7.1e-45
Identity = 112/248 (45.16%), Postives = 148/248 (59.68%), Query Frame = 0


Query: 1   MCGGAIISDF---IEKKRTRKLSNESLWSHIDPFS--DLLGLNYSPVK---SEKPKKRDR 60
           MCGGAIISD+   + K + RKL+ E LWS +D  +  D  G  YS  K   + +   ++ 
Sbjct: 1   MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGF-YSTSKLHPTNQVNVKEE 60

Query: 61  ATAAEAVAVEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYD 120
           A   E        + RKN+YRGIR+RPWGKWAAEIRDP+KGVRVWLGTFNTAEEAA AYD
Sbjct: 61  AVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYD 120

Query: 121 EAAKRIRGEKAKLNF-----APAPSFSPPLPAPQ--PQFPVKKRCVLPELIQGGFSTTGP 180
            AAK+IRG+KAKLNF      P P+++PP  +P+   Q P KK CV+ +        + P
Sbjct: 121 VAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSFP 180

Query: 181 PPCTRADNSCDRDEFYYG--------EELASLRSFLGLD-SEEQQPSQLSGNGEFERVDV 225
             C    N  +     YG        ++++SL SFL LD +  +QPSQL  +      +V
Sbjct: 181 VECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAEQPSQLDESVS----EV 240

[Close]

BLAST of HG10010372 vs. TAIR 10
Match: AT1G72360.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 69/131 (52.67%), Postives = 87/131 (66.41%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFS----DLLGLNYSPVKSEKPKKRDRATAA 60
           MCGGA+ISD+I  ++  + S +S W     F     D  G N+  ++S++P     +T  
Sbjct: 1   MCGGAVISDYIAPEKIARSSGKSSWRSNGVFDCSIYDFDG-NFDELESDEPFVFS-STHK 60

Query: 61  EAVAVEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAK 120
              +     K + + Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNTAEEAARAYD  AK
Sbjct: 61  HHASASDGKKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAK 120

Query: 121 RIRGEKAKLNF 128
           RIRG KAKLNF
Sbjct: 121 RIRGAKAKLNF 129

[Close]

BLAST of HG10010372 vs. TAIR 10
Match: AT2G47520.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-29
Identity = 75/128 (58.59%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFSDLLGLNYSPVKSEKPKKRDRATAAEAVA 60
           MCGGAIISDFI             WS  +     LG     V S K +K        +V+
Sbjct: 1   MCGGAIISDFI-------------WSKSESEPSQLG----SVSSRKKRK------PVSVS 60

Query: 61  VEKTPK-TRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIR 120
            E+  K  RKNLYRGIRQRPWGKWAAEIRDP KGVRVWLGTF TA+EAARAYD AA +IR
Sbjct: 61  EERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIR 105

Query: 121 GEKAKLNF 128
           G KAKLNF
Sbjct: 121 GRKAKLNF 105

[Close]

BLAST of HG10010372 vs. TAIR 10
Match: AT1G72360.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 4.2e-29
Identity = 70/134 (52.24%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLWSHIDPFS----DLLGLNYSPVKSEKP---KKRDRA 60
           MCGGA+ISD+I  ++  + S +S W     F     D  G N+  ++S++P       + 
Sbjct: 1   MCGGAVISDYIAPEKIARSSGKSSWRSNGVFDCSIYDFDG-NFDELESDEPFVFSSTHKH 60

Query: 61  TAAEAVAVEKTPKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDE 120
            A+ + +  K  K + + Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNTAEEAARAYD 
Sbjct: 61  HASGSASDGK--KKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDL 120

Query: 121 AAKRIRGEKAKLNF 128
            AKRIRG KAKLNF
Sbjct: 121 EAKRIRGAKAKLNF 131

[Close]

BLAST of HG10010372 vs. TAIR 10
Match: AT1G53910.1 (related to AP2 12 )

HSP 1 Score: 124.8 bits (312), Expect = 9.3e-29
Identity = 78/180 (43.33%), Postives = 96/180 (53.33%), Query Frame = 0


Query: 1   MCGGAIISDFIEKKRTRKLSNESLW----------------------------------- 60
           MCGGAIISDFI   R+R++++E +W                                   
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 61  --SHIDPFSDL-LGLNYSPVK----SEKPKKRDRATAAEAV-----------AVEKTPKT 120
             S ID   D  +G  ++ VK    +  PK    A A  +V           A +   + 
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRK 120

Query: 121 RKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNF 128
           RKN YRGIRQRPWGKWAAEIRDP++G R+WLGTF TAEEAARAYD AA+RIRG KAK+NF
Sbjct: 121 RKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF 180

The following BLAST results are available for this feature:

BLAST of HG10010372 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458405.1	1.4e-108	85.23	PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis melo]	[more]
XP_038876065.1	5.5e-108	85.65	ethylene-responsive transcription factor RAP2-3-like [Benincasa hispida]	[more]
KGN47418.1	7.4e-105	82.55	hypothetical protein Csa_023005 [Cucumis sativus]	[more]
XP_004153075.3	7.4e-105	82.55	ethylene-responsive transcription factor RAP2-3 [Cucumis sativus]	[more]
KAE8647095.1	1.6e-94	81.57	hypothetical protein Csa_021726 [Cucumis sativus]	[more]

BLAST of HG10010372 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42736	9.9e-44	45.16	Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22259	3.4e-28	58.59	Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8H0T5	5.8e-28	52.24	Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SSA8	1.3e-27	43.33	Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LUM4	3.2e-26	42.62	Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of HG10010372 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7W9	7.0e-109	85.23	ethylene-responsive transcription factor RAP2-3-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KD18	3.6e-105	82.55	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318160 PE=...	[more]
A0A6J1CA63	8.3e-86	70.73	ethylene-responsive transcription factor RAP2-3-like OS=Momordica charantia OX=3...	[more]
A0A6J1KF31	9.9e-79	69.46	ethylene-responsive transcription factor RAP2-3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1ER95	1.2e-76	67.93	ethylene-responsive transcription factor RAP2-3 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of HG10010372 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16770.1	7.1e-45	45.16	ethylene-responsive element binding protein	[more]
AT1G72360.3	1.1e-29	52.67	Integrase-type DNA-binding superfamily protein	[more]
AT2G47520.1	2.4e-29	58.59	Integrase-type DNA-binding superfamily protein	[more]
AT1G72360.2	4.2e-29	52.24	Integrase-type DNA-binding superfamily protein	[more]
AT1G53910.1	9.3e-29	43.33	related to AP2 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 104..124
None	No IPR available	PANTHER	PTHR31190:SF210	EREBP TRANSCRIPTION FACTOR	coord: 45..138
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 72..83 score: 70.45 coord: 94..110 score: 73.69
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 71..134 e-value: 6.3E-38 score: 142.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 72..121 e-value: 1.5E-15 score: 57.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 71..128 score: 23.828024
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 72..130 e-value: 3.96828E-35 score: 117.758
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 71..129 e-value: 7.1E-27 score: 95.3
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 45..138
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 71..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010372.1	HG10010372.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity