HG10010093 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010093
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionsmall acidic protein 1
LocationChr06: 18265637 .. 18265825 (+)
RNA-Seq ExpressionHG10010093
SyntenyHG10010093
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCCTACACCGATGGAATTCTTTGCGGAGCTGGAAGAACATGGATCGACGGTTGCCATGGACGTGGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTCATCTCGGCCGAGAACAAGCTTGCCGACGCCGATTTCTTCAATTCCTTCGAGGACGATTTTGATGACTCTGACATCAACTGA

mRNA sequence

ATGAGGCCTACACCGATGGAATTCTTTGCGGAGCTGGAAGAACATGGATCGACGGTTGCCATGGACGTGGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTCATCTCGGCCGAGAACAAGCTTGCCGACGCCGATTTCTTCAATTCCTTCGAGGACGATTTTGATGACTCTGACATCAACTGA

Coding sequence (CDS)

ATGAGGCCTACACCGATGGAATTCTTTGCGGAGCTGGAAGAACATGGATCGACGGTTGCCATGGACGTGGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTCATCTCGGCCGAGAACAAGCTTGCCGACGCCGATTTCTTCAATTCCTTCGAGGACGATTTTGATGACTCTGACATCAACTGA

Protein sequence

MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Homology
[Close]
BLAST of HG10010093 vs. NCBI nr
Match: XP_038875245.1 (small acidic protein 1 [Benincasa hispida])

HSP 1 Score: 120.9 bits (302), Expect = 3.8e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRPTPMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRPTPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 IN 63
          IN
Sbjct: 61 IN 62

[Close]
BLAST of HG10010093 vs. NCBI nr
Match: KAG6593800.1 (Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.2 bits (300), Expect = 6.5e-24
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1   MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
           MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 42  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 101

Query: 61  IN 63
           IN
Sbjct: 102 IN 103

[Close]
BLAST of HG10010093 vs. NCBI nr
Match: XP_022964281.1 (small acidic protein 1 [Cucurbita moschata] >XP_022964282.1 small acidic protein 1 [Cucurbita moschata] >XP_022964283.1 small acidic protein 1 [Cucurbita moschata] >XP_022964284.1 small acidic protein 1 [Cucurbita moschata] >XP_023000574.1 small acidic protein 1 [Cucurbita maxima] >XP_023000575.1 small acidic protein 1 [Cucurbita maxima] >XP_023000576.1 small acidic protein 1 [Cucurbita maxima] >XP_023000577.1 small acidic protein 1 [Cucurbita maxima])

HSP 1 Score: 120.2 bits (300), Expect = 6.5e-24
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 IN 63
          IN
Sbjct: 61 IN 62

[Close]
BLAST of HG10010093 vs. NCBI nr
Match: KAG7026131.1 (Small acidic protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.2 bits (300), Expect = 6.5e-24
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1   MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
           MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 53  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 112

Query: 61  IN 63
           IN
Sbjct: 113 IN 114

[Close]
BLAST of HG10010093 vs. NCBI nr
Match: XP_023513491.1 (small acidic protein 1 [Cucurbita pepo subsp. pepo] >XP_023513492.1 small acidic protein 1 [Cucurbita pepo subsp. pepo] >XP_023513494.1 small acidic protein 1 [Cucurbita pepo subsp. pepo] >XP_023513495.1 small acidic protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLAD+DFFNSFEDDFDDSD
Sbjct: 1  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFEDDFDDSD 60

Query: 61 IN 63
          IN
Sbjct: 61 IN 62

[Close]
BLAST of HG10010093 vs. ExPASy Swiss-Prot
Match: Q9T0H2 (Small acidic protein 1 OS=Arabidopsis thaliana OX=3702 GN=SMAP1 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 9.7e-15
Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = 0 

Query: 1  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRP  ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+D
Sbjct: 1  MRPMQLDMLSEMDDAGSSMAMDVDDLEAMEILNEGGLVSDNKLADADFFNKFDDDFDDTD 60

Query: 61 IN 63
          IN
Sbjct: 61 IN 62

[Close]
BLAST of HG10010093 vs. ExPASy Swiss-Prot
Match: Q1ECS0 (Small acidic protein 2 OS=Arabidopsis thaliana OX=3702 GN=SMAP2 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 9.1e-05
Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 1  MRP-TPMEFFAELEEHGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFE 60
          MRP    +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FE
Sbjct: 10 MRPMVYRDFLGEMEYPGYSMPMQMEIDEDDFGPMDMQFEVGGISPFQMKPEDSDFFNKFE 69

Query: 61 DDFDDSDIN 63
          DDFDDSDIN
Sbjct: 70 DDFDDSDIN 78

[Close]
BLAST of HG10010093 vs. ExPASy TrEMBL
Match: A0A6J1KE12 (small acidic protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494814 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.1e-24
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 IN 63
          IN
Sbjct: 61 IN 62

[Close]
BLAST of HG10010093 vs. ExPASy TrEMBL
Match: A0A6J1HIH2 (small acidic protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111464345 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.1e-24
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 IN 63
          IN
Sbjct: 61 IN 62

[Close]
BLAST of HG10010093 vs. ExPASy TrEMBL
Match: A0A0A0LNK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G166190 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.5e-23
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 1  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR +PMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 IN 63
          IN
Sbjct: 61 IN 62

[Close]
BLAST of HG10010093 vs. ExPASy TrEMBL
Match: A0A5A7SMJ5 (Small acidic protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00640 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.9e-23
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 1  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR +PMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 IN 63
          +N
Sbjct: 61 VN 62

[Close]
BLAST of HG10010093 vs. ExPASy TrEMBL
Match: A0A1S3CCM1 (small acidic protein 1 OS=Cucumis melo OX=3656 GN=LOC103499479 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.9e-23
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0 

Query: 1  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR +PMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 IN 63
          +N
Sbjct: 61 VN 62

[Close]
BLAST of HG10010093 vs. TAIR 10
Match: AT4G13520.1 (small acidic protein 1 )

HSP 1 Score: 80.1 bits (196), Expect = 6.9e-16
Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = 0 

Query: 1  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRP  ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+D
Sbjct: 1  MRPMQLDMLSEMDDAGSSMAMDVDDLEAMEILNEGGLVSDNKLADADFFNKFDDDFDDTD 60

Query: 61 IN 63
          IN
Sbjct: 61 IN 62

[Close]
BLAST of HG10010093 vs. TAIR 10
Match: AT3G24280.1 (small acidic protein 2 )

HSP 1 Score: 47.0 bits (110), Expect = 6.5e-06
Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 1  MRP-TPMEFFAELEEHGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFE 60
          MRP    +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FE
Sbjct: 10 MRPMVYRDFLGEMEYPGYSMPMQMEIDEDDFGPMDMQFEVGGISPFQMKPEDSDFFNKFE 69

Query: 61 DDFDDSDIN 63
          DDFDDSDIN
Sbjct: 70 DDFDDSDIN 78

The following BLAST results are available for this feature:
BLAST of HG10010093 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038875245.13.8e-2498.39small acidic protein 1 [Benincasa hispida][more]
KAG6593800.16.5e-2496.77Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022964281.16.5e-2496.77small acidic protein 1 [Cucurbita moschata] >XP_022964282.1 small acidic protein... [more]
KAG7026131.16.5e-2496.77Small acidic protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023513491.11.4e-2395.16small acidic protein 1 [Cucurbita pepo subsp. pepo] >XP_023513492.1 small acidic... [more]
BLAST of HG10010093 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0H29.7e-1558.06Small acidic protein 1 OS=Arabidopsis thaliana OX=3702 GN=SMAP1 PE=1 SV=1[more]
Q1ECS09.1e-0544.93Small acidic protein 2 OS=Arabidopsis thaliana OX=3702 GN=SMAP2 PE=2 SV=1[more]
BLAST of HG10010093 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KE123.1e-2496.77small acidic protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494814 PE=4 SV=1[more]
A0A6J1HIH23.1e-2496.77small acidic protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111464345 PE=4 SV=1[more]
A0A0A0LNK14.5e-2395.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G166190 PE=4 SV=1[more]
A0A5A7SMJ55.9e-2393.55Small acidic protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9... [more]
A0A1S3CCM15.9e-2393.55small acidic protein 1 OS=Cucumis melo OX=3656 GN=LOC103499479 PE=4 SV=1[more]
BLAST of HG10010093 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G13520.16.9e-1658.06small acidic protein 1 [more]
AT3G24280.16.5e-0644.93small acidic protein 2 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010093.1HG10010093.1mRNA