HG10010082 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010082
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr06: 18047388 .. 18047852 (+)
RNA-Seq ExpressionHG10010082
SyntenyHG10010082
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCATCTTTCTGTTTCTTCCACAGCTAAAAGATTCATTCTTTTGATACTTACTATTTTCCTCTTCGCTTCTCTCGGTACGTTTCGTTTGGTAATAATTTTGTTTACAATTCTTTTCGAAAAGTTATTTTTGAACGCTACAACAACATAAATATTTGAAAAATTACTTTAATTTTGGTTGCAAGATTTGAAACTCAAATCCGTCGATCGAGACAAATTTCTTTATTATTGTTTTTTTTTTTGAGGTAGAATAAGTATATGTTTTGAAATGAGGATAGATGGTTGAATAATATTTTGAATTGAAATAATGTTGTGTTAATATATGGCAGGAATAATGGCTGATTATGATTGTCTAATGAATTGTGATGATGTGCAAGTTTGTGATGAATTCTGCAGAAGAGCTGGGTATTTTGGAGGAATGTGTTCTTCTCCACTCCTACTTTGTTGCTGCAAAAAGCCATGA

mRNA sequence

ATGGCCCATCTTTCTGTTTCTTCCACAGCTAAAAGATTCATTCTTTTGATACTTACTATTTTCCTCTTCGCTTCTCTCGGAATAATGGCTGATTATGATTGTCTAATGAATTGTGATGATGTGCAAGTTTGTGATGAATTCTGCAGAAGAGCTGGGTATTTTGGAGGAATGTGTTCTTCTCCACTCCTACTTTGTTGCTGCAAAAAGCCATGA

Coding sequence (CDS)

ATGGCCCATCTTTCTGTTTCTTCCACAGCTAAAAGATTCATTCTTTTGATACTTACTATTTTCCTCTTCGCTTCTCTCGGAATAATGGCTGATTATGATTGTCTAATGAATTGTGATGATGTGCAAGTTTGTGATGAATTCTGCAGAAGAGCTGGGTATTTTGGAGGAATGTGTTCTTCTCCACTCCTACTTTGTTGCTGCAAAAAGCCATGA

Protein sequence

MAHLSVSSTAKRFILLILTIFLFASLGIMADYDCLMNCDDVQVCDEFCRRAGYFGGMCSSPLLLCCCKKP
Homology
[Close]
BLAST of HG10010082 vs. NCBI nr
Match: ONI26982.1 (hypothetical protein PRUPE_1G060500 [Prunus persica] >VVA35137.1 PREDICTED: EUGRSUZ_H00095 [Prunus dulcis])

HSP 1 Score: 53.9 bits (128), Expect = 6.4e-04
Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 0 

Query: 11 KRFILLILTIFLFASLGIMADYDCLMNCDDVQVCDEFCRRAGYFGGMCSSPLL-LCCCK 69
          K  ILL++   +F+SLG MAD  C   C+D   C+ FC+R G+ GG C  PL   CCC+
Sbjct: 12 KLIILLVVIAMVFSSLG-MADLQCRAKCEDQPDCNAFCQRIGFKGGDCQPPLYQFCCCE 69

[Close]
BLAST of HG10010082 vs. ExPASy TrEMBL
Match: A0A5E4G5T1 (PREDICTED: EUGRSUZ_H00095 OS=Prunus dulcis OX=3755 GN=ALMOND_2B001109 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.1e-04
Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 0 

Query: 11 KRFILLILTIFLFASLGIMADYDCLMNCDDVQVCDEFCRRAGYFGGMCSSPLL-LCCCK 69
          K  ILL++   +F+SLG MAD  C   C+D   C+ FC+R G+ GG C  PL   CCC+
Sbjct: 12 KLIILLVVIAMVFSSLG-MADLQCRAKCEDQPDCNAFCQRIGFKGGDCQPPLYQFCCCE 69

[Close]
BLAST of HG10010082 vs. ExPASy TrEMBL
Match: A0A251QT34 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G060500 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.1e-04
Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 0 

Query: 11 KRFILLILTIFLFASLGIMADYDCLMNCDDVQVCDEFCRRAGYFGGMCSSPLL-LCCCK 69
          K  ILL++   +F+SLG MAD  C   C+D   C+ FC+R G+ GG C  PL   CCC+
Sbjct: 12 KLIILLVVIAMVFSSLG-MADLQCRAKCEDQPDCNAFCQRIGFKGGDCQPPLYQFCCCE 69

[Close]
BLAST of HG10010082 vs. ExPASy TrEMBL
Match: A0A6J5TDF3 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS951 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.3e-04
Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 0 

Query: 11 KRFILLILTIFLFASLGIMADYDCLMNCDDVQVCDEFCRRAGYFGGMCSSPLL-LCCCK 69
          K  ILL++   +F+SLG MAD  C   C+D   C+ FC+R G+ GG C  PL   CCC+
Sbjct: 12 KLTILLVVIAMVFSSLG-MADLQCRAKCEDQPDCNAFCQRIGFKGGDCQPPLYQFCCCE 69

[Close]
BLAST of HG10010082 vs. ExPASy TrEMBL
Match: A0A6J5TDD8 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS953 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.3e-04
Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 0 

Query: 11 KRFILLILTIFLFASLGIMADYDCLMNCDDVQVCDEFCRRAGYFGGMCSSPLL-LCCCK 69
          K  ILL++   +F+SLG MAD  C   C+D   C+ FC+R G+ GG C  PL   CCC+
Sbjct: 12 KLTILLVVIAMVFSSLG-MADLQCQAKCEDQPDCNAFCQRIGFKGGDCQPPLYQFCCCE 69

[Close]
BLAST of HG10010082 vs. ExPASy TrEMBL
Match: A0A314XZI9 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_11976 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.3e-04
Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0 

Query: 11 KRFILLILTIFLFASLGIMADYDCLMNCDDVQVCDEFCRRAGYFGGMCSSPLL-LCCCK 69
          K  ILL++ + +F+SLG MAD  C   C+D   C+ FC+R G+ GG C  P    CCC+
Sbjct: 12 KLTILLVVIVMVFSSLG-MADLQCQAKCEDQPDCNAFCQRIGFKGGDCQPPFYQFCCCE 69

The following BLAST results are available for this feature:
BLAST of HG10010082 vs. NCBI nr
Match NameE-valueIdentityDescription
ONI26982.16.4e-0445.76hypothetical protein PRUPE_1G060500 [Prunus persica] >VVA35137.1 PREDICTED: EUGR... [more]
BLAST of HG10010082 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10010082 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5E4G5T13.1e-0445.76PREDICTED: EUGRSUZ_H00095 OS=Prunus dulcis OX=3755 GN=ALMOND_2B001109 PE=4 SV=1[more]
A0A251QT343.1e-0445.76Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G060500 PE=4 SV=1[more]
A0A6J5TDF35.3e-0445.76Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS951 PE=4 SV=... [more]
A0A6J5TDD85.3e-0445.76Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS953 PE=4 SV=... [more]
A0A314XZI95.3e-0444.07Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_119... [more]
BLAST of HG10010082 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010082.1HG10010082.1mRNA