HG10009119 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10009119
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-type domain-containing protein
LocationChr06: 2687989 .. 2688921 (+)
RNA-Seq ExpressionHG10009119
SyntenyHG10009119
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAAAGAACGGTCAACTTCCTTGCTCAAATCCCAATTTATTTGAATCTAAGTTTTGAACTTTTGATGCAGTACCCAAGAGCATCGGATGAGCATGTTCCCTTGTCATCTCCTCCCCCAGCATTTTCAACGGGGCTTTTAGTTGACACAAATCTGGATACATCAATCCCGGACACTTATAGATCACCTCCTTTGCCTATGCCATATGATGTTGTTTTAACAAATCCACATATTTCACCCGTGGCTCAAGAAATTGGCAGCAATAAGAATGATGCTGCAGCTCAGACAACAAATCCCGATACGATTCAAGAAACAGCATGCATAAACACTTGGGAAACTTCAGCCAAATGTGAAGGCATCGATGAATCAGACTGCAAGAAGCATACAGATTATGAAGTGGACACATTAAAGGAATCTGAAATTGAACTTTCAAAAGGTGTAGAATCTGTGGTCTTACCTATTGAAGAGAGGGGATGTTGTCCCATCTGTTTGGAAGGTGAAGTTTTGCCAAAACCTTGATTAGCTGCCTAATACCAAACCACCAAACCATGGAATTTTTATTAAACCTCCTATGCTAATGTCTTGACATTTTAGTTGCTTAAACTAACAAGTCACCGCATCGATGCTCACACAATAGCTGCACAGTACCACTCCATTCCATTTTAACGGCTTGGACTAACAAGTCACCTACTCATCATTTTCTGTTGTTTTTATGCAGAATATGATGGGGAGAATCCAAAACTTACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAACGAAGTGATATCTGTCCTGTGTGCGATCAGGTGTGTCTCAGTTCATGTTTTATCATTTATCACTCCTCGTTCTCCATGTGCAAAAAAAAAAAATTAGACATTCCATCTTCAAAAACCAACACTACTTTTTGA

mRNA sequence

ATGGTGGAAAGAACGGTCAACTTCCTTGCTCAAATCCCAATTTATTTGAATCTAAGTTTTGAACTTTTGATGCAGTACCCAAGAGCATCGGATGAGCATGTTCCCTTGTCATCTCCTCCCCCAGCATTTTCAACGGGGCTTTTAGTTGACACAAATCTGGATACATCAATCCCGGACACTTATAGATCACCTCCTTTGCCTATGCCATATGATGTTGTTTTAACAAATCCACATATTTCACCCGTGGCTCAAGAAATTGGCAGCAATAAGAATGATGCTGCAGCTCAGACAACAAATCCCGATACGATTCAAGAAACAGCATGCATAAACACTTGGGAAACTTCAGCCAAATGTGAAGGCATCGATGAATCAGACTGCAAGAAGCATACAGATTATGAAGTGGACACATTAAAGGAATCTGAAATTGAACTTTCAAAAGGTGTAGAATCTGTGGTCTTACCTATTGAAGAGAGGGGATGTTGTCCCATCTGTTTGGAAGAATATGATGGGGAGAATCCAAAACTTACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAACGAAGTGATATCTGTCCTGTGTGCGATCAGGTGTGTCTCAGTTCATGTTTTATCATTTATCACTCCTCGTTCTCCATGTGCAAAAAAAAAAAATTAGACATTCCATCTTCAAAAACCAACACTACTTTTTGA

Coding sequence (CDS)

ATGGTGGAAAGAACGGTCAACTTCCTTGCTCAAATCCCAATTTATTTGAATCTAAGTTTTGAACTTTTGATGCAGTACCCAAGAGCATCGGATGAGCATGTTCCCTTGTCATCTCCTCCCCCAGCATTTTCAACGGGGCTTTTAGTTGACACAAATCTGGATACATCAATCCCGGACACTTATAGATCACCTCCTTTGCCTATGCCATATGATGTTGTTTTAACAAATCCACATATTTCACCCGTGGCTCAAGAAATTGGCAGCAATAAGAATGATGCTGCAGCTCAGACAACAAATCCCGATACGATTCAAGAAACAGCATGCATAAACACTTGGGAAACTTCAGCCAAATGTGAAGGCATCGATGAATCAGACTGCAAGAAGCATACAGATTATGAAGTGGACACATTAAAGGAATCTGAAATTGAACTTTCAAAAGGTGTAGAATCTGTGGTCTTACCTATTGAAGAGAGGGGATGTTGTCCCATCTGTTTGGAAGAATATGATGGGGAGAATCCAAAACTTACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAACGAAGTGATATCTGTCCTGTGTGCGATCAGGTGTGTCTCAGTTCATGTTTTATCATTTATCACTCCTCGTTCTCCATGTGCAAAAAAAAAAAATTAGACATTCCATCTTCAAAAACCAACACTACTTTTTGA

Protein sequence

MVERTVNFLAQIPIYLNLSFELLMQYPRASDEHVPLSSPPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPVAQEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGIDESDCKKHTDYEVDTLKESEIELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQVCLSSCFIIYHSSFSMCKKKKLDIPSSKTNTTF
Homology
BLAST of HG10009119 vs. NCBI nr
Match: XP_038876112.1 (probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876113.1 probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876115.1 probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida])

HSP 1 Score: 340.9 bits (873), Expect = 8.9e-90
Identity = 165/181 (91.16%), Postives = 170/181 (93.92%), Query Frame = 0

Query: 26  YPRASDEHVPLSSP---PPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPV 85
           YPRAS+EHVPLSSP   PPAFS GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+P   PV
Sbjct: 23  YPRASEEHVPLSSPLSTPPAFSRGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTSPLTPPV 82

Query: 86  AQEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGIDESDCKKHTDYEVDTLKESEI 145
           AQEIGSNKNDAAAQTTNPDTIQETACINT ETSAKCEG+DESDCKKHTD+EVDTLKESEI
Sbjct: 83  AQEIGSNKNDAAAQTTNPDTIQETACINTRETSAKCEGVDESDCKKHTDFEVDTLKESEI 142

Query: 146 ELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 204
           ELSKGVES+VLPIEE   CPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD
Sbjct: 143 ELSKGVESMVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 202

BLAST of HG10009119 vs. NCBI nr
Match: XP_022156155.1 (probable E3 ubiquitin-protein ligase RHB1A isoform X2 [Momordica charantia])

HSP 1 Score: 332.8 bits (852), Expect = 2.4e-87
Identity = 163/188 (86.70%), Postives = 167/188 (88.83%), Query Frame = 0

Query: 24  MQYPRASDEHVPLSSP---PPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHIS 83
           MQYPRASDEHVPLSSP   P AFS+GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH  
Sbjct: 1   MQYPRASDEHVPLSSPIGAPSAFSSGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTP 60

Query: 84  PVAQEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGIDESDCKKHTDYEVDTLKES 143
           PVAQEIGSNKNDAAAQTTN D +QE AC N  ETSAKCEGIDESDCKKHTD+E DTLKES
Sbjct: 61  PVAQEIGSNKNDAAAQTTNSDAVQEIACTNARETSAKCEGIDESDCKKHTDFETDTLKES 120

Query: 144 EIELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPV 203
           EIELSKGVESV L IEE   CPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPV
Sbjct: 121 EIELSKGVESVALAIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPV 180

Query: 204 CDQVCLSS 209
           CDQ  L S
Sbjct: 181 CDQEMLFS 188

BLAST of HG10009119 vs. NCBI nr
Match: KAG7016978.1 (putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.6 bits (849), Expect = 5.4e-87
Identity = 163/185 (88.11%), Postives = 169/185 (91.35%), Query Frame = 0

Query: 23  LMQYPRASDEHVPLSSP---PPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHI 82
           +M YPRAS+EHVPLSSP   PPAF  GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH 
Sbjct: 56  IMSYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHT 115

Query: 83  SPVAQEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGI-DESDCKKHTDYEVDTLK 142
            PVAQEI SNKNDAAAQTTN DTIQET CINT ETSAKCEGI DESDCKKHTD+EVDTLK
Sbjct: 116 PPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLK 175

Query: 143 ESEIELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDIC 202
           ESEIELSKGV+SVVLPIEE   CPICLEEYDGENPKLTTKCEHHFHLACILEW+ERSDIC
Sbjct: 176 ESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWVERSDIC 235

Query: 203 PVCDQ 204
           PVCDQ
Sbjct: 236 PVCDQ 240

BLAST of HG10009119 vs. NCBI nr
Match: KAG6579518.1 (putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-86
Identity = 163/182 (89.56%), Postives = 167/182 (91.76%), Query Frame = 0

Query: 26  YPRASDEHVPLSSP---PPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPV 85
           YPRAS+EHVPLSSP   PPAF  GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH  PV
Sbjct: 24  YPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTPPV 83

Query: 86  AQEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGI-DESDCKKHTDYEVDTLKESE 145
           AQEI SNKNDAAAQTTN DTIQET CINT ETSAKCEGI DESDCKKHTD+EVDTLKESE
Sbjct: 84  AQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLKESE 143

Query: 146 IELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 204
           IELSKGV+SVVLPIEE   CPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC
Sbjct: 144 IELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 203

BLAST of HG10009119 vs. NCBI nr
Match: XP_023551494.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-86
Identity = 163/182 (89.56%), Postives = 167/182 (91.76%), Query Frame = 0

Query: 26  YPRASDEHVPLSSP---PPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPV 85
           YPRAS+EHVPLSSP   PPAF  GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH  PV
Sbjct: 24  YPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTPPV 83

Query: 86  AQEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGI-DESDCKKHTDYEVDTLKESE 145
           AQEI SNKNDAAAQTTN DTIQET CINT ETSAKCEGI DESDCKKHTD+EVDTLKESE
Sbjct: 84  AQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIGDESDCKKHTDFEVDTLKESE 143

Query: 146 IELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 204
           IELSKGV+SVVLPIEE   CPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC
Sbjct: 144 IELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 203

BLAST of HG10009119 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-33
Identity = 77/180 (42.78%), Postives = 110/180 (61.11%), Query Frame = 0

Query: 27  PRASDEHVPLSSPP---PAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPVA 86
           P + +E VP  +      AF+TGLLVD  L+TSIPDT+   P P+PYD++L  P      
Sbjct: 23  PESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRP------ 82

Query: 87  QEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGIDESDCKKHTDYEVDTLKESEIE 146
                       Q T+ ++I+     +++ET A CE + ESDCK      + + ++S+  
Sbjct: 83  ------------QCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFS 142

Query: 147 LSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQ 204
             +G++  +L  EE  CCPIC E+YD ENP+LTTKCEH FHL+C+LEW+ERSD CP+CD+
Sbjct: 143 KHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 181

BLAST of HG10009119 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-17
Identity = 57/194 (29.38%), Postives = 89/194 (45.88%), Query Frame = 0

Query: 15  YLNLSFELLMQYPRASDEHVPLSSPPPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVL 74
           +LNL   +   + R     +P S    A  T     ++ D  + + +RS P P+PYD   
Sbjct: 37  FLNLYISV---FRRGETRSLPSSVQATASITS---SSSHDNFLSEAFRSTPRPLPYDADP 96

Query: 75  TNPHISPVAQEIGSNKNDAAAQTTNPDTIQETACINT----WETSAKCEGIDESDCKKHT 134
                    +E GS+ +    +    D+  ++         W  +       +S  +  +
Sbjct: 97  RYFRSLVSRREKGSSHSHEEVEPLRSDSDADSESFGVGGCKWANNKSTLSDKDSKEEYSS 156

Query: 135 DYEVDTLKESEIELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILE 194
              +  L+     +    E++ +  E+   CP CLEEY  ENPK+ TKC HHFHL+CI E
Sbjct: 157 KSSLRILRSRSKSIMADSENMYILSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYE 216

Query: 195 WMERSDICPVCDQV 205
           WMERS+ CPVC +V
Sbjct: 217 WMERSENCPVCGKV 224

BLAST of HG10009119 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.4e-15
Identity = 59/152 (38.82%), Postives = 81/152 (53.29%), Query Frame = 0

Query: 56  SIPDTYRS----PPLPMPYDVVLTNPHISPVAQEIGSNKNDAAAQTTNPDTIQETACINT 115
           SIP++ R+     PL       L+N + SP++  I     +   QT+ P   +       
Sbjct: 9   SIPESSRTIDEHLPLSRATPSSLSNAYSSPLSPPIPLAITNINLQTSPPKLPRTQG---- 68

Query: 116 WETSAKCEGIDESDCKKHTDYEVDTLKESEIELSKGVESVVLPIEERGCCPICLEEYDGE 175
             +S    G+ +   +K T + VD L  ++ EL K        I+E   CPICLEEY+ +
Sbjct: 69  -NSSEASPGLTQVVPEKKT-WHVDDL--TDFELKKQYREA---IDE---CPICLEEYEID 128

Query: 176 NPKLTTKCEHHFHLACILEWMERSDICPVCDQ 204
           NPKL TKC H FHLACIL WMERS+ CPVCD+
Sbjct: 129 NPKLLTKCGHDFHLACILAWMERSEACPVCDK 146

BLAST of HG10009119 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-08
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0

Query: 161 CPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQV 205
           C ICLE +  ++P   T C+H +HL CI+EW +RS  CP+C Q+
Sbjct: 46  CSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQL 89

BLAST of HG10009119 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.2e-08
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 0

Query: 161 CPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQ 204
           C ICLE +   +P   T C+H +HL CILEW +RS  CP+C Q
Sbjct: 33  CSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQ 75

BLAST of HG10009119 vs. ExPASy TrEMBL
Match: A0A6J1DPI0 (probable E3 ubiquitin-protein ligase RHB1A isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023100 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.2e-87
Identity = 163/188 (86.70%), Postives = 167/188 (88.83%), Query Frame = 0

Query: 24  MQYPRASDEHVPLSSP---PPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHIS 83
           MQYPRASDEHVPLSSP   P AFS+GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH  
Sbjct: 1   MQYPRASDEHVPLSSPIGAPSAFSSGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTP 60

Query: 84  PVAQEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGIDESDCKKHTDYEVDTLKES 143
           PVAQEIGSNKNDAAAQTTN D +QE AC N  ETSAKCEGIDESDCKKHTD+E DTLKES
Sbjct: 61  PVAQEIGSNKNDAAAQTTNSDAVQEIACTNARETSAKCEGIDESDCKKHTDFETDTLKES 120

Query: 144 EIELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPV 203
           EIELSKGVESV L IEE   CPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPV
Sbjct: 121 EIELSKGVESVALAIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPV 180

Query: 204 CDQVCLSS 209
           CDQ  L S
Sbjct: 181 CDQEMLFS 188

BLAST of HG10009119 vs. ExPASy TrEMBL
Match: A0A6J1ER94 (probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita moschata OX=3662 GN=LOC111435815 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.8e-87
Identity = 163/182 (89.56%), Postives = 167/182 (91.76%), Query Frame = 0

Query: 26  YPRASDEHVPLSSP---PPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPV 85
           YPRAS+EHVPLSSP   PPAF  GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH  PV
Sbjct: 24  YPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTPPV 83

Query: 86  AQEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGI-DESDCKKHTDYEVDTLKESE 145
           AQEI SNKNDAAAQTTN DTIQET CINT ETSAKCEGI DESDCKKHTD+EVDTLKESE
Sbjct: 84  AQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLKESE 143

Query: 146 IELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 204
           IELSKGV+SVVLPIEE   CPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC
Sbjct: 144 IELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 203

BLAST of HG10009119 vs. ExPASy TrEMBL
Match: A0A6J1DR88 (probable E3 ubiquitin-protein ligase RHB1A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023100 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86
Identity = 161/186 (86.56%), Postives = 165/186 (88.71%), Query Frame = 0

Query: 26  YPRASDEHVPLSSP---PPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPV 85
           YPRASDEHVPLSSP   P AFS+GLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+PH  PV
Sbjct: 23  YPRASDEHVPLSSPIGAPSAFSSGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTPPV 82

Query: 86  AQEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGIDESDCKKHTDYEVDTLKESEI 145
           AQEIGSNKNDAAAQTTN D +QE AC N  ETSAKCEGIDESDCKKHTD+E DTLKESEI
Sbjct: 83  AQEIGSNKNDAAAQTTNSDAVQEIACTNARETSAKCEGIDESDCKKHTDFETDTLKESEI 142

Query: 146 ELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 205
           ELSKGVESV L IEE   CPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD
Sbjct: 143 ELSKGVESVALAIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 202

Query: 206 QVCLSS 209
           Q  L S
Sbjct: 203 QEMLFS 208

BLAST of HG10009119 vs. ExPASy TrEMBL
Match: A0A6J1I4I7 (probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita maxima OX=3661 GN=LOC111469091 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 6.4e-86
Identity = 161/182 (88.46%), Postives = 167/182 (91.76%), Query Frame = 0

Query: 26  YPRASDEHVPLSSP---PPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPV 85
           YPRAS+EHVPLSSP   PPAF  GLLVDTNLDTSIPDTYRSPPLPMPY+VVL++PH  PV
Sbjct: 23  YPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDTYRSPPLPMPYNVVLSHPHTPPV 82

Query: 86  AQEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGI-DESDCKKHTDYEVDTLKESE 145
           AQEI SNKNDAAAQTTN DTIQET CINT ETSAKCEGI DESDCKKHTD+EVDTLKESE
Sbjct: 83  AQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEGIDDESDCKKHTDFEVDTLKESE 142

Query: 146 IELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 204
           IELSKGV+SVVLPIEE   CPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC
Sbjct: 143 IELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVC 202

BLAST of HG10009119 vs. ExPASy TrEMBL
Match: A0A5A7TH60 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002410 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 5.4e-85
Identity = 158/181 (87.29%), Postives = 165/181 (91.16%), Query Frame = 0

Query: 26  YPRASDEHVPLSSP---PPAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPV 85
           YPRAS+EHVPLSSP   P AFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLT+P   PV
Sbjct: 23  YPRASEEHVPLSSPLRTPRAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTSPLTPPV 82

Query: 86  AQEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGIDESDCKKHTDYEVDTLKESEI 145
           AQEIGS KN+AAAQT N +TIQETACINT E SAKCEG+DESDCKKHTD+EV+TLKESEI
Sbjct: 83  AQEIGSYKNEAAAQTANSNTIQETACINTREASAKCEGVDESDCKKHTDFEVNTLKESEI 142

Query: 146 ELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 204
           ELSKGVES VLPIEE   CPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD
Sbjct: 143 ELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCD 202

BLAST of HG10009119 vs. TAIR 10
Match: AT5G41350.1 (RING/U-box superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 6.4e-38
Identity = 87/184 (47.28%), Postives = 116/184 (63.04%), Query Frame = 0

Query: 26  YPRASDEHVPLSS----PPPAFSTG-LLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHIS 85
           YPRA++E VPLSS       A STG ++VDTNL+TS PD Y  PPLP P+DV +  P   
Sbjct: 24  YPRATEERVPLSSAHNRTSSAISTGVVVVDTNLETSSPDAYIPPPLPTPFDVPIGIPQTP 83

Query: 86  PVAQEIGS-NKNDAAAQTTNPDTIQETACINTWETSAKCEGIDESDCKKHTDYEVDTLKE 145
              +E    +  + +  + N ++ QET    T      C    E+D K  T+ ++++ +E
Sbjct: 84  ASGEEATCVDIREVSVDSANTESAQETVDGITLGVPTTCSH-KETDSKIQTEIDLESTEE 143

Query: 146 SEIELSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICP 204
            + +LSK   +V +PIEE   CPICLEEYD ENPKL  KC+HHFHLACILEWMERS+ CP
Sbjct: 144 IDPKLSK---AVFIPIEEEEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCP 203

BLAST of HG10009119 vs. TAIR 10
Match: AT4G00335.3 (RING-H2 finger B1A )

HSP 1 Score: 145.2 bits (365), Expect = 6.6e-35
Identity = 81/189 (42.86%), Postives = 115/189 (60.85%), Query Frame = 0

Query: 27  PRASDEHVPLSSPP---PAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPVA 86
           P + +E VP  +      AF+TGLLVD  L+TSIPDT+   P P+PYD++L  P      
Sbjct: 23  PESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRP------ 82

Query: 87  QEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGIDESDCKKHTDYEVDTLKESEIE 146
                       Q T+ ++I+     +++ET A CE + ESDCK      + + ++S+  
Sbjct: 83  ------------QCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFS 142

Query: 147 LSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQ 206
             +G++  +L  EE  CCPIC E+YD ENP+LTTKCEH FHL+C+LEW+ERSD CP+CD+
Sbjct: 143 KHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 188

Query: 207 VCLSSCFII 213
           V L  C +I
Sbjct: 203 VKL--CLMI 188

BLAST of HG10009119 vs. TAIR 10
Match: AT4G00335.1 (RING-H2 finger B1A )

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34
Identity = 77/180 (42.78%), Postives = 110/180 (61.11%), Query Frame = 0

Query: 27  PRASDEHVPLSSPP---PAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPVA 86
           P + +E VP  +      AF+TGLLVD  L+TSIPDT+   P P+PYD++L  P      
Sbjct: 23  PESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRP------ 82

Query: 87  QEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGIDESDCKKHTDYEVDTLKESEIE 146
                       Q T+ ++I+     +++ET A CE + ESDCK      + + ++S+  
Sbjct: 83  ------------QCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFS 142

Query: 147 LSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQ 204
             +G++  +L  EE  CCPIC E+YD ENP+LTTKCEH FHL+C+LEW+ERSD CP+CD+
Sbjct: 143 KHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 181

BLAST of HG10009119 vs. TAIR 10
Match: AT4G00335.2 (RING-H2 finger B1A )

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34
Identity = 77/180 (42.78%), Postives = 110/180 (61.11%), Query Frame = 0

Query: 27  PRASDEHVPLSSPP---PAFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTNPHISPVA 86
           P + +E VP  +      AF+TGLLVD  L+TSIPDT+   P P+PYD++L  P      
Sbjct: 23  PESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDTF-CAPAPLPYDLLLGRP------ 82

Query: 87  QEIGSNKNDAAAQTTNPDTIQETACINTWETSAKCEGIDESDCKKHTDYEVDTLKESEIE 146
                       Q T+ ++I+     +++ET A CE + ESDCK      + + ++S+  
Sbjct: 83  ------------QCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFS 142

Query: 147 LSKGVESVVLPIEERGCCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQ 204
             +G++  +L  EE  CCPIC E+YD ENP+LTTKCEH FHL+C+LEW+ERSD CP+CD+
Sbjct: 143 KHQGLK--ILVDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 181

BLAST of HG10009119 vs. TAIR 10
Match: AT5G38895.1 (RING/U-box superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 4.2e-21
Identity = 60/157 (38.22%), Postives = 80/157 (50.96%), Query Frame = 0

Query: 51  TNLDTSIPDTYRSPPLPMPYDVVLTNPHISPVAQEIGSNKNDAAAQTTNPDTIQETACIN 110
           T LD S+   Y SPP P+PYD    +P      +  GS+ +   ++    DT   +  + 
Sbjct: 67  TALDDSLSSVYHSPPTPLPYD---ADPRYFRFVK--GSSHSGEESEPLRGDTEMSSEALG 126

Query: 111 TWETSAKCEGIDESDCKKHTDYEVDTLKESEIELSK---GVESVVLPIEERGCCPICLEE 170
             +  AK    D  D  K    EV T   S    SK   G+E      ++   CP CL++
Sbjct: 127 --DGGAKWSKSDSEDGSK----EVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPTCLDD 186

Query: 171 YDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQV 205
           Y  ENPK+ TKC HHFHL+CI EWMERS+ CPVC +V
Sbjct: 187 YTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKV 212

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038876112.18.9e-9091.16probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876113.1 p... [more]
XP_022156155.12.4e-8786.70probable E3 ubiquitin-protein ligase RHB1A isoform X2 [Momordica charantia][more]
KAG7016978.15.4e-8788.11putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subs... [more]
KAG6579518.11.2e-8689.56putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subs... [more]
XP_023551494.11.2e-8689.56probable E3 ubiquitin-protein ligase RHB1A [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q2HIJ82.7e-3342.78Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
Q8LE941.2e-1729.38E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022... [more]
Q93ZF64.4e-1538.82E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ... [more]
Q4TU143.0e-0847.73E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ... [more]
Q9ZT425.2e-0851.16E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ... [more]
Match NameE-valueIdentityDescription
A0A6J1DPI01.2e-8786.70probable E3 ubiquitin-protein ligase RHB1A isoform X2 OS=Momordica charantia OX=... [more]
A0A6J1ER945.8e-8789.56probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1DR881.7e-8686.56probable E3 ubiquitin-protein ligase RHB1A isoform X1 OS=Momordica charantia OX=... [more]
A0A6J1I4I76.4e-8688.46probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A5A7TH605.4e-8587.29E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
Match NameE-valueIdentityDescription
AT5G41350.16.4e-3847.28RING/U-box superfamily protein [more]
AT4G00335.36.6e-3542.86RING-H2 finger B1A [more]
AT4G00335.11.9e-3442.78RING-H2 finger B1A [more]
AT4G00335.21.9e-3442.78RING-H2 finger B1A [more]
AT5G38895.14.2e-2138.22RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 161..201
e-value: 6.3E-8
score: 42.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 161..201
e-value: 1.9E-10
score: 40.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 161..202
score: 12.061441
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 130..217
e-value: 8.7E-14
score: 52.5
NoneNo IPR availablePANTHERPTHR46463ZINC FINGER, RING/FYVE/PHD-TYPEcoord: 24..206
NoneNo IPR availablePANTHERPTHR46463:SF37ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEINcoord: 24..206
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 160..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10009119.1HG10009119.1mRNA