HG10008780 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008780
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RecQ-mediated genome instability protein 1
Location	Chr10: 26000147 .. 26003704 (-)
RNA-Seq Expression	HG10008780
Synteny	HG10008780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAGAAGGCGTCTCCGCCTGAGCTGGTCTTCCGACGAAGACTTGGAACACGACGCTCACTGCCCTGATTCCTCCCCTGCCTCTCTTCAGCCTCTCATTCTAGACAATCTCAACTCTCATTTTAATCCCAACGTTTCTGAACCCCTCCAAGTTCCCGATTCCGACGACGACGAACAAGATTTTATCGACGTCTCCGACCATCTCTCCCCTCCCTCTCCGGATTCTGATCATTCTCTTCCTCACTCACCCCACCCGAATCCGCTCAGTCCTCGTCTCGCTTCCACCCACCCGCCGTGTCCTGTAAGCGAGTTCCTTCGGGGACTTGGTTTAAGCTTGAAGAGAGAGTGGTTGGATGTCTGTATCTATGCCCTACAAGGGTCTGTACCAGGTTTTTTAAGCCTCAACCCTGCGGAGAAAGGAAAGCTGTGTTTCGAGCAGTTCTTGGTTTCTGATATGAATTACGCGGGTGCTGGTGTCCTGCCTGAAAATGTTGATTCTATGCATCTTGTTGATCTCCCTGGTCCGTACGTACTGCAGGTTATTTGAGTTCATTCCCATAAATTACTTTTTGGTTAAAATATCATTTTGGTCCCTATACGAAATTTCAGAGATTGTAAGAATGACCTGCTGCTTGAGGTAGGCCAGGTTGTAGAGTCCTCACTGAGTTGTTTGCCTTTTCAGGTCGATGAAATAGTTAACATCAGTTGTGCTCTAAAAGGTAGATATCAGACTGCCCCTGCGAATATTAAGAGGTGCCTTAAGCTGTCCATGACGGATGGTGTTCAACGAGTTTTTGGCATGGAATACAGGCCTATTAAGGATCTTGAAGTTTTGGCCCCTGCTGGGTTGAAGGTTTCTTAACTTTCTCTGTCCTCGATCAAGTGTTATTTTTTTCCTCAACCAGGTCTAGGTGCTTCGAAACTACTTGATTAATTGATGATAGGGATAAATTACTTATAGCTTTTGTACAGGTAGTAATCTGCAGTGTAAGTGTACGACGTGGGCTTCTAATGCTAGTTCCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAGGAATTGGAGGCAGCTCGGAAGCGGCTTGTTGATGAAGTGAACAAGCCACCTAGAGGAAGGAGGTATTTTTAATGCTTAGAGTACATTGTTTTCATCCATACCTTTCTTTGTTGGATTCCACCGTACAATTTTCTCTGTCCACGGAAGATTTCTTTTTCCACTGTTTAGAGCTCATTCTTTTATCTTTTGAAATTGATTGCTTACAGACTTCAAACATGCACTTTACACTGTTATTTCTGGCTGGACTTCTCTTCAGAAGAGCTTATTATGGCAACATAATGTCTTCCACTGTATTCTGTTATTCAATCATTTGTGATTTATATACTTGTTCAGAACGAGGACAGGCGTAGTTCCTCCCTTGGCAAGCAGAGCAACACGTGCTGCATGGCCATCAGACAATGTTCAAGAGCCTGGGCATCCTAGCAGAATAGTGGATACTGAACCCTCTCGTTCAGACCAAGGTATTGATCAGTTATATATTCCCCTTCCTTTCTTTCCGGGGAAAAAGGAAAGATTTTTTACATTGTCAACTGGATGTTGAATAAGATGATGTACCTGGTATGATGTTCAGTGTGTCAGATTCCTGGACTTTAGAGACCAAATAGCTGCTACTACTCTCTATCTTGGGCAATTGCCTAGTTTCATTCTCTCATTATGTGCCTTTTTCGTTCTCTTGTTTGTTTCAACTATTGATGCAGACCGTAGTGGGGGGAAACAGGGATAGAACAAGAAAACAAAAAATGGAAGAGGAAGGGAAATGCTTGTCCAACTTAGTAAATTTCGTACCCAATTCATTCTGGAATAAAAAACATTATAAACTTCAAAGTAGGAAGAACAAAACTCCTACTAGAATCCAATGTAAATTTCACGGTCAAGTAGAATTATTTGAATATGACTCATAATAGTTATTTGAATATAAAACTCCTATCTCCATGTAGCCCATCATTTATCACATAGTAATAAAATAATAATTTAATTTTTTGAAAAAATAAATTTTTTTTTGCCACGTGGTGGGTTTTAATTGTATACCTAATGAGCTACATGGAGATAGGTGTAGCCAAGACTACGTCCAAGTATTTTTCTATAAAAACTACACAATTACATGAGGCATTTGATATTTTCCGCTAGATTAGCTACGAATGTCAGCCAAGTTTATCATGGATGTAATATTTGTTTTATTATTATTAGTACTTTGGTCTTGAATTTCAGGTTCAATCTGTTGTTTTAGACAGTGCATTCTTCCAAAATTTCTTTGTTTTCTTCTTCTTTCCCCCCACAATTCAAGAGGTCACTGTTGCTCATTTGACTATCAGGTGTTCGCATGTTCCAAAGGGGAAATGAAGCATTTACTGCTCTAGTTGGTGATGCATTTACTACTCCAGTCAGTAGAACAAATGCTAACTCTGAGTTGTCTTCTAATTTTGTTTCAAATGTTGAGGAGATTCATTCACATTCCATTCCTAGTGGTAGAGCTAGCACTGAGCCTACTATTGTGTCCAATTCGGTAGAGGACACCAATGTGGTCAATTCGGTAGATGATACCAATACAGTCAATTCAGTAGACGATACCAATATGGTCAACTCGGTAGAGGATGCCATTATGGTCGATATTGAGCATCCACTCATTTTATCTGGTGATAGAGAAATTCCTTTCACTTATTTGGCTAGTTTGTCGGCTAAGTTGGCAGCAGTGAAGGAAAAATCTCCATCAGTTCGTGGAAAAATCAAGGTAGGATAAAAATTCATATTTCATTGCAACCTGCTCATATTGAATTGTATTGAACATGGCATGGTGAATGAAAATGGAATTTAATTGTTTCTATATTTTACTGAAATTGAAAACACAATCTTTGTACTTGTAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAAGCAAAGGGCAACATACGAGCTACATGTGTATGTTGATGACGGTAGCCTCATTTCTGAGGTCCTCATTGATCACGAGGTGAGTCAAACACCATATAGTTTATGCAGACCCTAGTCAAAGAGGACCGTATCCAACTGCTTTTATGTTGATTATTAGGTTGTGCAAAAAGCGATTGGCCATTCTCCCAAGGATGTTACAGGGGCTCTTGATTCTTCTGACGTCAAAGTAGTGAGTGTTATGAAGGAGACCATGAGACAGTTCCAAATTTTCTTGATAAATTTTGAGGTAAATTGATGGCATTGAGCTTCTAACCCCCCAGTTATTGCTTCCTCCGCTCCCGCTAACTTCTAAAGACTATGCCCTTTCTGTATATTACTTGCATATTCCATATACTTTTAGTTAATTTAAGCATCATTCTTTCTTATCTTGTTTCATCGAAGGGTACAATGCTGGTTGAGATGAATAGAACGTCTTCTCTGCCAGTTGTCCTTGAGATGGCAGAGGGTTGTCCGGAATCTGATGCTCGGTTGCTTTTGAGAAGACTCACATGTTCGAATGCTGTTCCAACTGAAGAGCATACCCATATTATAGACGTATCCCCTTAA

mRNA sequence

ATGACCAGAAGGCGTCTCCGCCTGAGCTGGTCTTCCGACGAAGACTTGGAACACGACGCTCACTGCCCTGATTCCTCCCCTGCCTCTCTTCAGCCTCTCATTCTAGACAATCTCAACTCTCATTTTAATCCCAACGTTTCTGAACCCCTCCAAGTTCCCGATTCCGACGACGACGAACAAGATTTTATCGACGTCTCCGACCATCTCTCCCCTCCCTCTCCGGATTCTGATCATTCTCTTCCTCACTCACCCCACCCGAATCCGCTCAGTCCTCGTCTCGCTTCCACCCACCCGCCGTGTCCTGTAAGCGAGTTCCTTCGGGGACTTGGTTTAAGCTTGAAGAGAGAGTGGTTGGATGTCTGTATCTATGCCCTACAAGGGTCTGTACCAGGTTTTTTAAGCCTCAACCCTGCGGAGAAAGGAAAGCTGTGTTTCGAGCAGTTCTTGGTTTCTGATATGAATTACGCGGGTGCTGGTGTCCTGCCTGAAAATGTTGATTCTATGCATCTTGTTGATCTCCCTGGTCCGTACGTACTGCAGGTCGATGAAATAGTTAACATCAGTTGTGCTCTAAAAGGTAGATATCAGACTGCCCCTGCGAATATTAAGAGGTGCCTTAAGCTGTCCATGACGGATGGTGTTCAACGAGTTTTTGGCATGGAATACAGGCCTATTAAGGATCTTGAAGTTTTGGCCCCTGCTGGGTTGAAGGTAGTAATCTGCAGTGTAAGTGTACGACGTGGGCTTCTAATGCTAGTTCCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAGGAATTGGAGGCAGCTCGGAAGCGGCTTGTTGATGAAGTGAACAAGCCACCTAGAGGAAGGAGAACGAGGACAGGCGTAGTTCCTCCCTTGGCAAGCAGAGCAACACGTGCTGCATGGCCATCAGACAATGTTCAAGAGCCTGGGCATCCTAGCAGAATAGTGGATACTGAACCCTCTCGTTCAGACCAAGGTGTTCGCATGTTCCAAAGGGGAAATGAAGCATTTACTGCTCTAGTTGGTGATGCATTTACTACTCCAGTCAGTAGAACAAATGCTAACTCTGAGTTGTCTTCTAATTTTGTTTCAAATGTTGAGGAGATTCATTCACATTCCATTCCTAGTGGTAGAGCTAGCACTGAGCCTACTATTGTGTCCAATTCGGTAGAGGACACCAATGTGGTCAATTCGGTAGATGATACCAATACAGTCAATTCAGTAGACGATACCAATATGGTCAACTCGGTAGAGGATGCCATTATGGTCGATATTGAGCATCCACTCATTTTATCTGGTGATAGAGAAATTCCTTTCACTTATTTGGCTAGTTTGTCGGCTAAGTTGGCAGCAGTGAAGGAAAAATCTCCATCAGTTCGTGGAAAAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAAGCAAAGGGCAACATACGAGCTACATGTGTATGTTGATGACGGTAGCCTCATTTCTGAGGTCCTCATTGATCACGAGGTTGTGCAAAAAGCGATTGGCCATTCTCCCAAGGATGTTACAGGGGCTCTTGATTCTTCTGACGTCAAAGTAGTGAGTGTTATGAAGGAGACCATGAGACAGTTCCAAATTTTCTTGATAAATTTTGAGGGTACAATGCTGGTTGAGATGAATAGAACGTCTTCTCTGCCAGTTGTCCTTGAGATGGCAGAGGGTTGTCCGGAATCTGATGCTCGGTTGCTTTTGAGAAGACTCACATGTTCGAATGCTGTTCCAACTGAAGAGCATACCCATATTATAGACGTATCCCCTTAA

Coding sequence (CDS)

ATGACCAGAAGGCGTCTCCGCCTGAGCTGGTCTTCCGACGAAGACTTGGAACACGACGCTCACTGCCCTGATTCCTCCCCTGCCTCTCTTCAGCCTCTCATTCTAGACAATCTCAACTCTCATTTTAATCCCAACGTTTCTGAACCCCTCCAAGTTCCCGATTCCGACGACGACGAACAAGATTTTATCGACGTCTCCGACCATCTCTCCCCTCCCTCTCCGGATTCTGATCATTCTCTTCCTCACTCACCCCACCCGAATCCGCTCAGTCCTCGTCTCGCTTCCACCCACCCGCCGTGTCCTGTAAGCGAGTTCCTTCGGGGACTTGGTTTAAGCTTGAAGAGAGAGTGGTTGGATGTCTGTATCTATGCCCTACAAGGGTCTGTACCAGGTTTTTTAAGCCTCAACCCTGCGGAGAAAGGAAAGCTGTGTTTCGAGCAGTTCTTGGTTTCTGATATGAATTACGCGGGTGCTGGTGTCCTGCCTGAAAATGTTGATTCTATGCATCTTGTTGATCTCCCTGGTCCGTACGTACTGCAGGTCGATGAAATAGTTAACATCAGTTGTGCTCTAAAAGGTAGATATCAGACTGCCCCTGCGAATATTAAGAGGTGCCTTAAGCTGTCCATGACGGATGGTGTTCAACGAGTTTTTGGCATGGAATACAGGCCTATTAAGGATCTTGAAGTTTTGGCCCCTGCTGGGTTGAAGGTAGTAATCTGCAGTGTAAGTGTACGACGTGGGCTTCTAATGCTAGTTCCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAGGAATTGGAGGCAGCTCGGAAGCGGCTTGTTGATGAAGTGAACAAGCCACCTAGAGGAAGGAGAACGAGGACAGGCGTAGTTCCTCCCTTGGCAAGCAGAGCAACACGTGCTGCATGGCCATCAGACAATGTTCAAGAGCCTGGGCATCCTAGCAGAATAGTGGATACTGAACCCTCTCGTTCAGACCAAGGTGTTCGCATGTTCCAAAGGGGAAATGAAGCATTTACTGCTCTAGTTGGTGATGCATTTACTACTCCAGTCAGTAGAACAAATGCTAACTCTGAGTTGTCTTCTAATTTTGTTTCAAATGTTGAGGAGATTCATTCACATTCCATTCCTAGTGGTAGAGCTAGCACTGAGCCTACTATTGTGTCCAATTCGGTAGAGGACACCAATGTGGTCAATTCGGTAGATGATACCAATACAGTCAATTCAGTAGACGATACCAATATGGTCAACTCGGTAGAGGATGCCATTATGGTCGATATTGAGCATCCACTCATTTTATCTGGTGATAGAGAAATTCCTTTCACTTATTTGGCTAGTTTGTCGGCTAAGTTGGCAGCAGTGAAGGAAAAATCTCCATCAGTTCGTGGAAAAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAAGCAAAGGGCAACATACGAGCTACATGTGTATGTTGATGACGGTAGCCTCATTTCTGAGGTCCTCATTGATCACGAGGTTGTGCAAAAAGCGATTGGCCATTCTCCCAAGGATGTTACAGGGGCTCTTGATTCTTCTGACGTCAAAGTAGTGAGTGTTATGAAGGAGACCATGAGACAGTTCCAAATTTTCTTGATAAATTTTGAGGGTACAATGCTGGTTGAGATGAATAGAACGTCTTCTCTGCCAGTTGTCCTTGAGATGGCAGAGGGTTGTCCGGAATCTGATGCTCGGTTGCTTTTGAGAAGACTCACATGTTCGAATGCTGTTCCAACTGAAGAGCATACCCATATTATAGACGTATCCCCTTAA

Protein sequence

MTRRRLRLSWSSDEDLEHDAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQVPDSDDDEQDFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLSLKREWLDVCIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVICSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPLASRATRAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALVGDAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRASTEPTIVSNSVEDTNVVNSVDDTNTVNSVDDTNMVNSVEDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQRATYELHVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSSDVKVVSVMKETMRQFQIFLINFEGTMLVEMNRTSSLPVVLEMAEGCPESDARLLLRRLTCSNAVPTEEHTHIIDVSP

Homology

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BLAST of HG10008780 vs. NCBI nr
Match: XP_038879467.1 (recQ-mediated genome instability protein 1 [Benincasa hispida])

HSP 1 Score: 1059.3 bits (2738), Expect = 1.2e-305
Identity = 537/592 (90.71%), Postives = 559/592 (94.43%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEHDAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQVPDSDDDEQ 60
           MTRRRLRLSWSSDEDLEH++HCPDSSP SLQPLILDNLNSHFNPNVSEPLQVPDSDD+EQ
Sbjct: 1   MTRRRLRLSWSSDEDLEHNSHCPDSSPTSLQPLILDNLNSHFNPNVSEPLQVPDSDDEEQ 60

Query: 61  DFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLSLKREWLDV 120
           DFIDVSDHLSPPS DSDHSLPHSP PNPLSP +ASTHPPCPVS+FLRG GLSLKREWL  
Sbjct: 61  DFIDVSDHLSPPSADSDHSLPHSPDPNPLSPAVASTHPPCPVSDFLRGFGLSLKREWLHA 120

Query: 121 CIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180
           CI +LQG VPGF SLNPAEKGKLCFEQFLVSDMNY GAGVLP+NVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQGFVPGFFSLNPAEKGKLCFEQFLVSDMNYTGAGVLPQNVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240
           VDEIVNISC LKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPI+DLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCGLKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIRDLEVLAPAGLKVVI 240

Query: 241 CSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPLASRAT 300
           C++SVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEV+KPPRGRRTRTGVVPPLASRAT
Sbjct: 241 CNISVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVSKPPRGRRTRTGVVPPLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALVGDAFTTPVSRTNANSE 360
            AAWPSDNVQ+PGHPSR+VDTEPSRSDQGV MF RGNE FTA VGDAFTTPV RTNA+SE
Sbjct: 301 HAAWPSDNVQDPGHPSRVVDTEPSRSDQGVGMFHRGNETFTAPVGDAFTTPVRRTNAHSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRASTEPTIVSNSVEDTNVVNSVDDTNTVNSVDDTNMVNSV 420
           LSSNFVSNVEEIHSHS+PSG ASTEPTIVSNSVEDTNVVN +DDT+T NSVDDTN  N  
Sbjct: 361 LSSNFVSNVEEIHSHSVPSGGASTEPTIVSNSVEDTNVVNPIDDTDTFNSVDDTNTANLE 420

Query: 421 EDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQ 480
           ED IMVDIEHPLILSGDREIPFTYLASLSAK AAVKEKSPSVRGKIKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKWAAVKEKSPSVRGKIKCFLTGVKGFQFKQ 480

Query: 481 RATYELHVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSSDVKVVSVMKETMRQFQ 540
           RATYELHVYVDDGSLISE+LIDHEVV KAIGHSPKDVT ALDSSDVKVVS MKETMRQFQ
Sbjct: 481 RATYELHVYVDDGSLISEILIDHEVVLKAIGHSPKDVTDALDSSDVKVVSAMKETMRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSSLPVVLEMAEGCPESDARLLLRRLTCSNAVPTEE 593
           IFL+NFEGTMLVEMNRTS LPVVLEMAEGC ESDA+LLLRRLTCSNA+ T+E
Sbjct: 541 IFLVNFEGTMLVEMNRTSFLPVVLEMAEGCLESDAQLLLRRLTCSNAIRTDE 592

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BLAST of HG10008780 vs. NCBI nr
Match: XP_004138254.1 (recQ-mediated genome instability protein 1 isoform X1 [Cucumis sativus] >KGN63468.1 hypothetical protein Csa_013916 [Cucumis sativus])

HSP 1 Score: 1052.7 bits (2721), Expect = 1.2e-303
Identity = 538/601 (89.52%), Postives = 561/601 (93.34%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEHDAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQVPDSDDDEQ 60
           MTRRRLRLSWSSDEDLE D+HCPDSSP SLQP+ILDNLNSHFNPNVSEP+QVPDSDDDEQ
Sbjct: 1   MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  DFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLSLKREWLDV 120
            FIDVSDHLSPPSPDSDHSLPHSP  NPL P L STHPPCPVS+FLRGLGLSLKREWLD 
Sbjct: 61  HFIDVSDHLSPPSPDSDHSLPHSPDLNPLIPGLVSTHPPCPVSDFLRGLGLSLKREWLDA 120

Query: 121 CIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180
           CI +LQGSVPGF SLN +EKGKLCFEQFLVSDMNY GAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQR+FGMEYRPIK+LEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI 240

Query: 241 CSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPLASRAT 300
            +VSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRG RTRTGVVP LASRAT
Sbjct: 241 SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALVGDAFTTPVSRTNANSE 360
           RAAWPSDNVQEPGHPSR+VD EPS S+QG RMF RGNEAFTA V DAFTTPVSRTNANSE
Sbjct: 301 RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRASTEPTIVSNSVEDTNVVNSVDDTNTVNSVDDTNMVNSV 420
           LSSNFVSNVEEIHSHSIPSGRA TEPTIV NSVED++VVNSVD+TN  NSVDD+N VNSV
Sbjct: 361 LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNTNMGNSVDDSNAVNSV 420

Query: 421 EDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQ 480
           ED IMVDIEHPLILSGDREIPFTYLASLSAKLAA K+KSP VRG+IKCFLTGVKGFQFK+
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR 480

Query: 481 RATYELHVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSSDVKVVSVMKETMRQFQ 540
           R  YEL VYVDDGSLISEVLIDHEVVQKAIGHSPKDVT A+DSSDVKVVS MKET+RQFQ
Sbjct: 481 RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSSLPVVLEMAEGCPESDARLLLRRLTCSNAVPTEEHTHIIDVS 600
           IFLINFEGTMLVEMNRTS LPVVLEM+EGC ESDARLLLRRL CSN+VPT+EH  IIDVS
Sbjct: 541 IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS 600

Query: 601 P 602
           P
Sbjct: 601 P 601

[Close]

BLAST of HG10008780 vs. NCBI nr
Match: XP_008464406.1 (PREDICTED: recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 1050.4 bits (2715), Expect = 5.8e-303
Identity = 542/601 (90.18%), Postives = 561/601 (93.34%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEHDAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQVPDSDDDEQ 60
           MTRRRLRLS SSDEDLE D+HC DSSP SLQP+ILDNLNSHFNPNVSEP+QVPDSDDDEQ
Sbjct: 1   MTRRRLRLSSSSDEDLEQDSHCLDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  DFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLSLKREWLDV 120
            FIDVSDHLSPPSPDSDHSLPHSP PNPLSP LASTHPPCPVS+FLRGLGLSLKREWL  
Sbjct: 61  HFIDVSDHLSPPSPDSDHSLPHSPDPNPLSPGLASTHPPCPVSDFLRGLGLSLKREWLGA 120

Query: 121 CIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180
           CI +LQ SVPGF SLN + KGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQESVPGFFSLNHSAKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 241 CSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPLASRAT 300
             VSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVP LASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALVGDAFTTPVSRTNANSE 360
            AAWPSDNVQEPGH SR+VD EPSRSDQG R+F RGNEAF+A V DAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRASTEPTIVSNSVEDTNVVNSVDDTNTVNSVDDTNMVNSV 420
           LSSNFVSNVEEI SHSIPSGRAS EPTIV NSVEDT+VVNSVDDTNTVNSV+D+N VNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 420

Query: 421 EDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQ 480
           ED IMVDIEHPLILSGDREIPFTYLASLSAKLAA KEK PSVRG+IKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 480

Query: 481 RATYELHVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSSDVKVVSVMKETMRQFQ 540
           R  YEL V+VDDGSLISEVLID+EVVQKAIGHSPKDVT A+DSSDVKVVS MKET+RQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSSLPVVLEMAEGCPESDARLLLRRLTCSNAVPTEEHTHIIDVS 600
           IFLINFEGTMLVEMN+TSSLPVVLEMAEGC ESDARLLLRRL CSNAVPT+EH  IIDVS
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS 600

Query: 601 P 602
           P
Sbjct: 601 P 601

[Close]

BLAST of HG10008780 vs. NCBI nr
Match: TYJ98438.1 (recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1039.6 bits (2687), Expect = 1.0e-299
Identity = 536/597 (89.78%), Postives = 556/597 (93.13%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEHDAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQVPDSDDDEQ 60
           MTRRRLRLS SSDEDLE D+HC DSSP SLQP+ILDNLNSHFNPNVSEP+QVPDSDDDEQ
Sbjct: 1   MTRRRLRLSSSSDEDLEQDSHCLDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  DFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLSLKREWLDV 120
            FIDVSDHLSPPSPDSDHSLPHSP PNPLSP LASTHPPCPVS+FLRGLGLSLKREWL  
Sbjct: 61  HFIDVSDHLSPPSPDSDHSLPHSPDPNPLSPGLASTHPPCPVSDFLRGLGLSLKREWLGA 120

Query: 121 CIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180
           CI +LQ SVPGF SLN + KGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQESVPGFFSLNHSAKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 241 CSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPLASRAT 300
             VSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVP LASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALVGDAFTTPVSRTNANSE 360
            AAWPSDNVQEPGH SR+VD EPSRSDQG R+F RGNEAF+A V DAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRASTEPTIVSNSVEDTNVVNSVDDTNTVNSVDDTNMVNSV 420
           LSSNFVSNVEEI SHSIPSGRAS EPTIV NSVEDT+VVNSVDDTNTVNSV+D+N VNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 420

Query: 421 EDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQ 480
           ED IMVDIEHPLILSGDREIPFTYLASLSAKLAA KEK PSVRG+IKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 480

Query: 481 RATYELHVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSSDVKVVSVMKETMRQFQ 540
           R  YEL V+VDDGSLISEVLID+EVVQKAIGHSPKDVT A+DSSDVKVVS MKET+RQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSSLPVVLEMAEGCPESDARLLLRRLTCSNAVPTEEHTHII 598
           IFLINFEGTMLVEMN+TSSLPVVLEMAEGC ESDARLLLRRL CSNAVPT+EH   +
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARYL 597

[Close]

BLAST of HG10008780 vs. NCBI nr
Match: KAA0057758.1 (recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1036.9 bits (2680), Expect = 6.6e-299
Identity = 535/597 (89.61%), Postives = 555/597 (92.96%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEHDAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQVPDSDDDEQ 60
           MTRRRLRLS SSDEDLE D+HC DSSP SLQP+ILDNLNSHFNPNVSEP+QVPDSDDDEQ
Sbjct: 1   MTRRRLRLSSSSDEDLEQDSHCLDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  DFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLSLKREWLDV 120
            FIDVSDHLSPPSPDSDHSLPHSP PNPLSP LASTHPPCPVS+FLRGLGLSLKREWL  
Sbjct: 61  HFIDVSDHLSPPSPDSDHSLPHSPDPNPLSPGLASTHPPCPVSDFLRGLGLSLKREWLGA 120

Query: 121 CIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180
           CI +LQ SVPGF SLN + KGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQESVPGFFSLNHSAKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 241 CSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPLASRAT 300
             VSVRRGLLMLVPEAFEVLGG VEELEAARKRLVDEVNKPPRGRRTRTGVVP LASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGQVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALVGDAFTTPVSRTNANSE 360
            AAWPSDNVQEPGH SR+VD EPSRSDQG R+F RGNEAF+A V DAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRASTEPTIVSNSVEDTNVVNSVDDTNTVNSVDDTNMVNSV 420
           LSSNFVSNVEEI SHSIPSGRAS EPTIV NSVEDT+VVNSVDDTN VNSV+D+N VNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNMVNSVNDSNAVNSV 420

Query: 421 EDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQ 480
           ED IMVDIEHPLILSGDREIPFTYLASLSAKLAA KEKSPSVRG+IKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKSPSVRGRIKCFLTGVKGFQFKQ 480

Query: 481 RATYELHVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSSDVKVVSVMKETMRQFQ 540
           R  YEL V+VDDGSLISEVLID+EVVQKAIGHSPKDVT A+DSSDVKVVS MKET+RQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSSLPVVLEMAEGCPESDARLLLRRLTCSNAVPTEEHTHII 598
           IFLINFEGTMLVEMN+TSSLPVVLEMAEGC ESDARLLLRRL CSNAVPT+EH   +
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARYL 597

[Close]

BLAST of HG10008780 vs. ExPASy Swiss-Prot
Match: Q5XUX6 (RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RMI1 PE=1 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.1e-128
Identity = 298/641 (46.49%), Postives = 386/641 (60.22%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEH--------DAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQV 60
           M RRRL+L +SSDE+ E         D+       +S+QP    +++S+ NPN  E + +
Sbjct: 1   MRRRRLQLRYSSDEEEEDETGTSGVGDSVQSFGIASSIQP--ETSVSSNSNPNPGERIAI 60

Query: 61  PDSDDDEQDFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLS 120
                 E + IDV  +  P  PDS  S+P +P+P   S  ++      P+SE L  +G+ 
Sbjct: 61  -----SEVEIIDVFGNPQPTPPDS--SIP-TPYPVYPSESVSGNDYESPISEVLSRMGIK 120

Query: 121 LKREWLDVCIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVD 180
           LKREW   C+  L+ S+P F  L+ A K K CFEQF+  DMN  G GVLP NV SM+ ++
Sbjct: 121 LKREWWVSCLSGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGVLPPNVASMNRIE 180

Query: 181 LPGPYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLA 240
           L GP+VLQVDEIVNI C LKGRY+ A A +KRCLKLSMTDGVQRVFGMEYRPIKDL+VLA
Sbjct: 181 LAGPFVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRPIKDLQVLA 240

Query: 241 PAGLKVVICSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVV 300
           PAGLK+V+ SV VR GLLMLVPE  EVLGG+VEELE ARKRLV EVNKPPRG+RTR GVV
Sbjct: 241 PAGLKIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNKPPRGKRTRVGVV 300

Query: 301 PPLASRATRAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALV------GD 360
           P L +RAT AAW S N  + G+         + S  G     + N+     V        
Sbjct: 301 PSLTTRATLAAW-SLNGNDTGNHVHDTGNHVNSSASGNASHTQANQGIPVHVTRTHNSSR 360

Query: 361 AFTTPVSRTNANSEL-----------SSNFVSNVEEIHSHS------------------I 420
           A   P++ TN  + +           S++      +IHS S                   
Sbjct: 361 AMDEPLASTNVGATVSRVEHMQIDTASAHGERTFSDIHSTSSNIHRAASTAGTGTSCSGA 420

Query: 421 PSGRASTEPTIVSNSVEDTNVVNS-----------VDDTNTVNSVDDTNMVNSVEDAIMV 480
            SG  S    +  NS++ T+ V S           V DT T     D+  V +    ++V
Sbjct: 421 CSGARSFANNVGGNSLDQTSNVTSFVEEMHIDTGRVRDTTTHIYGSDSGGVAAEFSNMVV 480

Query: 481 DIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQRATYEL 540
           D+E P +LS + E PFTYLA LS K A +K+    V+G+IKCFLTGVK FQFKQ++TYEL
Sbjct: 481 DLEGPSVLSTNTEKPFTYLAELSQKWAVMKDTIHFVQGRIKCFLTGVKKFQFKQQSTYEL 540

Query: 541 HVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSS-DVKVVSVMKETMRQFQIFLIN 587
             YVDDGSLI E+L+ ++VVQK IGHS  +VT AL SS    + ++MKE +++FQ+FL +
Sbjct: 541 LCYVDDGSLICEILLHNDVVQKRIGHSSMEVTAALSSSAPTSLNAMMKEKLKRFQLFLAD 600

[Close]

BLAST of HG10008780 vs. ExPASy Swiss-Prot
Match: Q7XRV0 (RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RMI1 PE=3 SV=2)

HSP 1 Score: 351.7 bits (901), Expect = 1.7e-95
Identity = 260/724 (35.91%), Postives = 355/724 (49.03%), Query Frame = 0


Query: 48  EPLQVPDSDDDEQDFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCP------ 107
           E ++  +  D +  F+D  +H+SPP P    +    P P P +P    T PP P      
Sbjct: 105 EEVEEIEDPDGDSPFVDAPEHISPPPPPPPPARTPMPTPTP-TPTPTPTRPPVPVWAAPL 164

Query: 108 ---------------------------------------------VSEFLRGLGLSLKRE 167
                                                        V EFLRGLGL L+ E
Sbjct: 165 PARTPTPTPSAPPRAAAPSPAGTPSPSPIPPSSTPVSALSGPLRQVDEFLRGLGLRLRPE 224

Query: 168 WLDVCIYALQGSVPGFLSLNPAE-KGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPG 227
           WL+ C       VPGF  L   E   + CFEQFL +DMN  GAGVLPE V SMH   L G
Sbjct: 225 WLESC----AAGVPGFYGLGGVEAMARRCFEQFLFADMNACGAGVLPEGVGSMHNAVLDG 284

Query: 228 PYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAG 287
           P VLQVDEIVN+S  L+ RY+ A A  KRCLKLSMTDG+QR++GMEYRPIKDLEVLAPAG
Sbjct: 285 PLVLQVDEIVNLSAPLRERYRDAHAGPKRCLKLSMTDGIQRIYGMEYRPIKDLEVLAPAG 344

Query: 288 LKVVICSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPL 347
            K+VI +V +RRGL MLVPE  E+LGG+ +EL+ AR RLV EVNKPPRG+R + G+  PL
Sbjct: 345 FKIVIRNVHIRRGLFMLVPEVIEILGGVDDELDEARNRLVSEVNKPPRGKRKQGGL--PL 404

Query: 348 ASRATRAAWPSD----NVQEPG----------HPSRI----------------VDT---- 407
           +SRAT AAWP++    N  E G          HP+R+                VD     
Sbjct: 405 SSRATLAAWPTNANATNDAEQGASVPRTVNTPHPTRLGNASHASQVGRTTQPMVDNLIPH 464

Query: 408 -------EPSRSDQGVRM------FQRGNEAFTA----------------------LVGD 467
                  E SR  Q + M        R N+  +A                      LV +
Sbjct: 465 VVVSNAQEQSRHIQEITMQGQPTSLNRHNKEASASYRYNAQCSISGTTRAMADEHVLVSN 524

Query: 468 A--------------------------------------FTTPVSRTNANSELSSNFV-S 527
           A                                        +  +R  A+  +  +FV +
Sbjct: 525 AQEQSPHIQEITMQDQSTSLNGRNKEASASTSYRYNAQCSISGTTRAMADERVDPSFVGN 584

Query: 528 NVEE---------IHSHSIPSGRASTEPTIVSNSVEDTNVV-NSVDDTNTVNSVDDTNMV 587
           NV E         +  H   S  +  E ++ + S  D+ +  + V +T T +   +    
Sbjct: 585 NVHEQMQRVQGITMQDHISASSESKRELSVTTPSGYDSRLAPHGVGNTGTRSG--EATRS 644

Query: 588 NSVEDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQ 602
           ++V+D I  +I HP+ L G+ E PFTY+ ++ A     ++  P ++GKIK  +T VK FQ
Sbjct: 645 SNVDDGIN-NIGHPISLCGENEKPFTYIFNMLADWGVQQDTVPYIQGKIKGLITSVKRFQ 704

[Close]

BLAST of HG10008780 vs. ExPASy Swiss-Prot
Match: Q9H9A7 (RecQ-mediated genome instability protein 1 OS=Homo sapiens OX=9606 GN=RMI1 PE=1 SV=3)

HSP 1 Score: 83.2 bits (204), Expect = 1.1e-14
Identity = 77/302 (25.50%), Postives = 138/302 (45.70%), Query Frame = 0


Query: 117 WLDVCIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGP 176
           WL+ CI  +Q      ++L+ A+  K  FEQ+L++D+      +LP+ +  +   +L G 
Sbjct: 26  WLEACINWIQ-EENNNVNLSQAQMNKQVFEQWLLTDLRDLEHPLLPDGILEIPKGELNGF 85

Query: 177 YVLQVDEIVNISCALKGRYQ------------TAPANI---------KRCLKLSMTDGVQ 236
           Y LQ++ +V++S     + Q            TA A +          R L L +TDG+ 
Sbjct: 86  YALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIV 145

Query: 237 RVFGMEYRPIKDLEVLAPAGLKVVIC-SVSVRRGLLMLVPEAFEVLGGLVEEL--EAARK 296
           ++ GMEY+PI  L    P G K++I  ++S R G+L+L PE  +VLGG V+ L  E A++
Sbjct: 146 QIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVLLLKPENVKVLGGEVDALLEEYAQE 205

Query: 297 RLVDEVNKPPRGRRTRTGVVPPLASRATRAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRM 356
           +++  +                                  G P  +V   P+ S++ +  
Sbjct: 206 KVLARL---------------------------------IGEPDLVVSVIPNNSNENI-- 265

Query: 357 FQRGNEAFTALVGDAFTTPVSRTNANSELSSNFVSNVEEI-----HSHSIPSGRASTEPT 390
             R  +     +G +    ++  + N EL++N  ++ E        S++IP+ ++S EP 
Sbjct: 266 -PRVTDVLDPALGPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPTRQSSFEPE 290

[Close]

BLAST of HG10008780 vs. ExPASy Swiss-Prot
Match: Q6DDH2 (RecQ-mediated genome instability protein 1 OS=Xenopus laevis OX=8355 GN=rmi1 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.2e-14
Identity = 132/537 (24.58%), Postives = 204/537 (37.99%), Query Frame = 0


Query: 117 WLDVCIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGP 176
           WL+ CI  +Q       SL  AE  K  FEQ+L++D+      VLP N+      +L G 
Sbjct: 27  WLEACINWIQEE--NGSSLLQAEINKQVFEQWLLTDLRDLEFPVLPANITDSLKCELNGF 86

Query: 177 YVLQVDEIVNISC-------ALKGRYQTA--------------PANIKRCLKLSMTDGVQ 236
           + +Q+D +V+IS         LKG+  T                A   R L L +TDG Q
Sbjct: 87  HAVQMDSLVDISLPAYSQLQKLKGKDSTNEQVTCTTQQSQKPWEAKPTRMLMLQLTDGTQ 146

Query: 237 RVFGMEYRPIKDLEVLAPAGLKVVICSVSV-RRGLLMLVPEAFEVLGGLVEELEAARKRL 296
            +  MEYRPI+ L      G K+V+    V R G+L+L PE  +VLGG VE L A     
Sbjct: 147 HIQAMEYRPIQALNANLSPGTKMVLQGTIVCRLGVLLLKPENVKVLGGEVEALVA----- 206

Query: 297 VDEVNKPPRGRRTRTGVVPPLASRATRAAWPSDNVQEPGHPSRIVDTEPSR----SDQGV 356
                       T+T V+  L            NVQE  H + +   E  +    SD+ +
Sbjct: 207 ----------EYTQTKVLSRLIGVEDNTVAQHSNVQE--HAAGVAAGELGQALGPSDEDL 266

Query: 357 RMFQRGNEAFTALVGDAFTTPVSRTNANSELSSNFVSNV----------EEIHSHSIPSG 416
                 NE F+   G    +     N NS +SS+               ++I   SI +G
Sbjct: 267 LASLEENEEFSINNGVPSESGYYSRNENSSISSSTQHQTQDSIVRCWVDDDILEFSINNG 326

Query: 417 RAS-------TEPTIVSNSVE---DTNVVNSVDDTNTVNSVDDTNMVNSVEDAIMVDIEH 476
             S        E + +S+S +     ++V          +V   N+ N+       DI+ 
Sbjct: 327 VPSESGYYSRNENSSISSSTQHQTQDSIVRQTSFPMLDQTVVHVNVANNHAIEEQFDIDD 386

Query: 477 PLILS-------------------GDREIPFTYLASLSAKLAA----------------- 536
            L L                    G  ++P T  A+  A  A+                 
Sbjct: 387 ELFLEEEIQRELEEMSMSQAEVTHGSTDLPTTLSATSHASSASCTSDQNNIDIPPYTYLS 446

Query: 537 --VKEKSPSVR-GKIKCFLTGVKGFQFKQRATYELHVYVDDGSLISEVLIDHEVVQKAIG 569
             +  KS S+   K+K F+  + G        + +   + DG+    V    +V+ + IG
Sbjct: 447 TILASKSRSITCVKLKSFIVTLNGNLSHSCGLWNIKAKISDGTGYLNVEFSDDVLTELIG 506

[Close]

BLAST of HG10008780 vs. ExPASy Swiss-Prot
Match: A4IF98 (RecQ-mediated genome instability protein 1 OS=Bos taurus OX=9913 GN=RMI1 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.8e-12
Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 0


Query: 117 WLDVCIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGP 176
           WL+ CI  +Q      ++L+ A+  K  FEQ+L++D+      +LP  +      +L G 
Sbjct: 26  WLEACINWIQ-EENDHVNLSQAQMNKQVFEQWLLTDLRDLEHRLLPSGILETPKGELNGF 85

Query: 177 YVLQVDEIVNIS-------CALKGRYQTA--------------PANIKRCLKLSMTDGVQ 236
           + LQ++ +V++S         L+G+  T                A   R L L +TDG+ 
Sbjct: 86  FALQINSLVDVSQPAYAQIQKLRGKNTTNDLITAETQVTPKPWEAKPSRMLMLQLTDGIV 145

Query: 237 RVFGMEYRPIKDLEVLAPAGLKVVIC-SVSVRRGLLMLVPEAFEVLGGLVEEL 268
           ++ GMEY+ I  L    P G K++I  ++S R G+L+L PE  ++LGG V+ L
Sbjct: 146 QIQGMEYQSIPALHSDLPPGTKILIYGNISFRLGVLLLKPENVKMLGGEVDAL 197

[Close]

BLAST of HG10008780 vs. ExPASy TrEMBL
Match: A0A0A0LNV2 (RecQ-mediated genome instability protein 1 OS=Cucumis sativus OX=3659 GN=Csa_1G001400 PE=3 SV=1)

HSP 1 Score: 1052.7 bits (2721), Expect = 5.6e-304
Identity = 538/601 (89.52%), Postives = 561/601 (93.34%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEHDAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQVPDSDDDEQ 60
           MTRRRLRLSWSSDEDLE D+HCPDSSP SLQP+ILDNLNSHFNPNVSEP+QVPDSDDDEQ
Sbjct: 1   MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  DFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLSLKREWLDV 120
            FIDVSDHLSPPSPDSDHSLPHSP  NPL P L STHPPCPVS+FLRGLGLSLKREWLD 
Sbjct: 61  HFIDVSDHLSPPSPDSDHSLPHSPDLNPLIPGLVSTHPPCPVSDFLRGLGLSLKREWLDA 120

Query: 121 CIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180
           CI +LQGSVPGF SLN +EKGKLCFEQFLVSDMNY GAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQR+FGMEYRPIK+LEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI 240

Query: 241 CSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPLASRAT 300
            +VSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRG RTRTGVVP LASRAT
Sbjct: 241 SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALVGDAFTTPVSRTNANSE 360
           RAAWPSDNVQEPGHPSR+VD EPS S+QG RMF RGNEAFTA V DAFTTPVSRTNANSE
Sbjct: 301 RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRASTEPTIVSNSVEDTNVVNSVDDTNTVNSVDDTNMVNSV 420
           LSSNFVSNVEEIHSHSIPSGRA TEPTIV NSVED++VVNSVD+TN  NSVDD+N VNSV
Sbjct: 361 LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNTNMGNSVDDSNAVNSV 420

Query: 421 EDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQ 480
           ED IMVDIEHPLILSGDREIPFTYLASLSAKLAA K+KSP VRG+IKCFLTGVKGFQFK+
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR 480

Query: 481 RATYELHVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSSDVKVVSVMKETMRQFQ 540
           R  YEL VYVDDGSLISEVLIDHEVVQKAIGHSPKDVT A+DSSDVKVVS MKET+RQFQ
Sbjct: 481 RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSSLPVVLEMAEGCPESDARLLLRRLTCSNAVPTEEHTHIIDVS 600
           IFLINFEGTMLVEMNRTS LPVVLEM+EGC ESDARLLLRRL CSN+VPT+EH  IIDVS
Sbjct: 541 IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS 600

Query: 601 P 602
           P
Sbjct: 601 P 601

[Close]

BLAST of HG10008780 vs. ExPASy TrEMBL
Match: A0A1S3CLI7 (RecQ-mediated genome instability protein 1 OS=Cucumis melo OX=3656 GN=LOC103502304 PE=3 SV=1)

HSP 1 Score: 1050.4 bits (2715), Expect = 2.8e-303
Identity = 542/601 (90.18%), Postives = 561/601 (93.34%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEHDAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQVPDSDDDEQ 60
           MTRRRLRLS SSDEDLE D+HC DSSP SLQP+ILDNLNSHFNPNVSEP+QVPDSDDDEQ
Sbjct: 1   MTRRRLRLSSSSDEDLEQDSHCLDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  DFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLSLKREWLDV 120
            FIDVSDHLSPPSPDSDHSLPHSP PNPLSP LASTHPPCPVS+FLRGLGLSLKREWL  
Sbjct: 61  HFIDVSDHLSPPSPDSDHSLPHSPDPNPLSPGLASTHPPCPVSDFLRGLGLSLKREWLGA 120

Query: 121 CIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180
           CI +LQ SVPGF SLN + KGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQESVPGFFSLNHSAKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 241 CSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPLASRAT 300
             VSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVP LASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALVGDAFTTPVSRTNANSE 360
            AAWPSDNVQEPGH SR+VD EPSRSDQG R+F RGNEAF+A V DAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRASTEPTIVSNSVEDTNVVNSVDDTNTVNSVDDTNMVNSV 420
           LSSNFVSNVEEI SHSIPSGRAS EPTIV NSVEDT+VVNSVDDTNTVNSV+D+N VNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 420

Query: 421 EDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQ 480
           ED IMVDIEHPLILSGDREIPFTYLASLSAKLAA KEK PSVRG+IKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 480

Query: 481 RATYELHVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSSDVKVVSVMKETMRQFQ 540
           R  YEL V+VDDGSLISEVLID+EVVQKAIGHSPKDVT A+DSSDVKVVS MKET+RQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSSLPVVLEMAEGCPESDARLLLRRLTCSNAVPTEEHTHIIDVS 600
           IFLINFEGTMLVEMN+TSSLPVVLEMAEGC ESDARLLLRRL CSNAVPT+EH  IIDVS
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS 600

Query: 601 P 602
           P
Sbjct: 601 P 601

[Close]

BLAST of HG10008780 vs. ExPASy TrEMBL
Match: A0A5D3BJQ9 (RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00390 PE=3 SV=1)

HSP 1 Score: 1039.6 bits (2687), Expect = 4.9e-300
Identity = 536/597 (89.78%), Postives = 556/597 (93.13%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEHDAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQVPDSDDDEQ 60
           MTRRRLRLS SSDEDLE D+HC DSSP SLQP+ILDNLNSHFNPNVSEP+QVPDSDDDEQ
Sbjct: 1   MTRRRLRLSSSSDEDLEQDSHCLDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  DFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLSLKREWLDV 120
            FIDVSDHLSPPSPDSDHSLPHSP PNPLSP LASTHPPCPVS+FLRGLGLSLKREWL  
Sbjct: 61  HFIDVSDHLSPPSPDSDHSLPHSPDPNPLSPGLASTHPPCPVSDFLRGLGLSLKREWLGA 120

Query: 121 CIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180
           CI +LQ SVPGF SLN + KGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQESVPGFFSLNHSAKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 241 CSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPLASRAT 300
             VSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVP LASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALVGDAFTTPVSRTNANSE 360
            AAWPSDNVQEPGH SR+VD EPSRSDQG R+F RGNEAF+A V DAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRASTEPTIVSNSVEDTNVVNSVDDTNTVNSVDDTNMVNSV 420
           LSSNFVSNVEEI SHSIPSGRAS EPTIV NSVEDT+VVNSVDDTNTVNSV+D+N VNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 420

Query: 421 EDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQ 480
           ED IMVDIEHPLILSGDREIPFTYLASLSAKLAA KEK PSVRG+IKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 480

Query: 481 RATYELHVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSSDVKVVSVMKETMRQFQ 540
           R  YEL V+VDDGSLISEVLID+EVVQKAIGHSPKDVT A+DSSDVKVVS MKET+RQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSSLPVVLEMAEGCPESDARLLLRRLTCSNAVPTEEHTHII 598
           IFLINFEGTMLVEMN+TSSLPVVLEMAEGC ESDARLLLRRL CSNAVPT+EH   +
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARYL 597

[Close]

BLAST of HG10008780 vs. ExPASy TrEMBL
Match: A0A5A7URI1 (RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00400 PE=3 SV=1)

HSP 1 Score: 1036.9 bits (2680), Expect = 3.2e-299
Identity = 535/597 (89.61%), Postives = 555/597 (92.96%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEHDAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQVPDSDDDEQ 60
           MTRRRLRLS SSDEDLE D+HC DSSP SLQP+ILDNLNSHFNPNVSEP+QVPDSDDDEQ
Sbjct: 1   MTRRRLRLSSSSDEDLEQDSHCLDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  DFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLSLKREWLDV 120
            FIDVSDHLSPPSPDSDHSLPHSP PNPLSP LASTHPPCPVS+FLRGLGLSLKREWL  
Sbjct: 61  HFIDVSDHLSPPSPDSDHSLPHSPDPNPLSPGLASTHPPCPVSDFLRGLGLSLKREWLGA 120

Query: 121 CIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180
           CI +LQ SVPGF SLN + KGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQESVPGFFSLNHSAKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 241 CSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPLASRAT 300
             VSVRRGLLMLVPEAFEVLGG VEELEAARKRLVDEVNKPPRGRRTRTGVVP LASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGQVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALVGDAFTTPVSRTNANSE 360
            AAWPSDNVQEPGH SR+VD EPSRSDQG R+F RGNEAF+A V DAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRASTEPTIVSNSVEDTNVVNSVDDTNTVNSVDDTNMVNSV 420
           LSSNFVSNVEEI SHSIPSGRAS EPTIV NSVEDT+VVNSVDDTN VNSV+D+N VNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNMVNSVNDSNAVNSV 420

Query: 421 EDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQ 480
           ED IMVDIEHPLILSGDREIPFTYLASLSAKLAA KEKSPSVRG+IKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKSPSVRGRIKCFLTGVKGFQFKQ 480

Query: 481 RATYELHVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSSDVKVVSVMKETMRQFQ 540
           R  YEL V+VDDGSLISEVLID+EVVQKAIGHSPKDVT A+DSSDVKVVS MKET+RQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSSLPVVLEMAEGCPESDARLLLRRLTCSNAVPTEEHTHII 598
           IFLINFEGTMLVEMN+TSSLPVVLEMAEGC ESDARLLLRRL CSNAVPT+EH   +
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARYL 597

[Close]

BLAST of HG10008780 vs. ExPASy TrEMBL
Match: A0A6J1E2W4 (RecQ-mediated genome instability protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111430076 PE=3 SV=1)

HSP 1 Score: 955.3 bits (2468), Expect = 1.2e-274
Identity = 504/608 (82.89%), Postives = 532/608 (87.50%), Query Frame = 0


Query: 1   MTRRRLRLSWSSD-----EDLEHDAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQVPDS 60
           M RRRLRLS SSD     ED EHD  CPDSS  SLQP I+DNLNSHFNPNVSEP+Q+ D 
Sbjct: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSD- 60

Query: 61  DDDEQDFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLSLKR 120
           DDDEQDFIDVS+HLSPPSPDSDHSL HSP PN   P +AS  P CPVSEFLRGLGLSLKR
Sbjct: 61  DDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPN---PHVASREPSCPVSEFLRGLGLSLKR 120

Query: 121 EWLDVCIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPG 180
           EWLD CI A  GSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPG
Sbjct: 121 EWLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPG 180

Query: 181 PYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAG 240
           PYVLQVDEIVNISC LKGRYQTAPA+IKRCLKLSMTDGVQRVFGMEYRPIK LEVLAPAG
Sbjct: 181 PYVLQVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAG 240

Query: 241 LKVVICSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPPL 300
           LKVVIC+VSVRRG+LMLVPEAFEVLGGLVEELE+AR+RLVDEVNKPPRGRRTRTG+VPPL
Sbjct: 241 LKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGMVPPL 300

Query: 301 ASRATRAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALVGDAFTTPVSRT 360
           A+RAT AAWPSD V EP H SRIVDTEPSRSDQGV MF RGNEA TA V DAFTTPVSRT
Sbjct: 301 ATRATHAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVSRT 360

Query: 361 NANSELSSNFVSNVEEIHSHSIPSGRASTEPTIVSNSVEDTNVVNSVDDTNTVNSVDDTN 420
           NANSELS+NFVSNVEE+H HS+PS R+ T  TI+SNS+E         DTNTVNS++ TN
Sbjct: 361 NANSELSTNFVSNVEEVHLHSVPSSRSRTVSTIMSNSIE---------DTNTVNSIEGTN 420

Query: 421 MVNSVEDAIMVDIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKG 480
           MVNSVED  MVDIEHPLILSGDR++PFTYLASLSAK A+ KEKSPSVRGKIKCFLTGVKG
Sbjct: 421 MVNSVEDTDMVDIEHPLILSGDRKMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKG 480

Query: 481 FQFKQRATYELHVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSSDVKVVSVMKET 540
           FQF+QR TY+LH YVDDGSLISEVLIDHE VQ+AIGHSPKDVT AL SSDVKVVS MKE 
Sbjct: 481 FQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEA 540

Query: 541 MRQFQIFLINFEGTMLVEMNRTSSLPVVLEMAEGCPESDARLLLRRLTCSNAVPTEEHTH 600
           +RQFQIFL+NFEGTMLVEMNRTSSLPVVLEM EGC ESDA LLLRRL CSNAV T EH  
Sbjct: 541 LRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTNEHAR 595

Query: 601 I--IDVSP 602
           I  IDVSP
Sbjct: 601 IDPIDVSP 595

[Close]

BLAST of HG10008780 vs. TAIR 10
Match: AT5G63540.1 (Domain of unknown function (DUF1767) )

HSP 1 Score: 461.8 bits (1187), Expect = 8.2e-130
Identity = 298/641 (46.49%), Postives = 386/641 (60.22%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEH--------DAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQV 60
           M RRRL+L +SSDE+ E         D+       +S+QP    +++S+ NPN  E + +
Sbjct: 1   MRRRRLQLRYSSDEEEEDETGTSGVGDSVQSFGIASSIQP--ETSVSSNSNPNPGERIAI 60

Query: 61  PDSDDDEQDFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLS 120
                 E + IDV  +  P  PDS  S+P +P+P   S  ++      P+SE L  +G+ 
Sbjct: 61  -----SEVEIIDVFGNPQPTPPDS--SIP-TPYPVYPSESVSGNDYESPISEVLSRMGIK 120

Query: 121 LKREWLDVCIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVD 180
           LKREW   C+  L+ S+P F  L+ A K K CFEQF+  DMN  G GVLP NV SM+ ++
Sbjct: 121 LKREWWVSCLSGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGVLPPNVASMNRIE 180

Query: 181 LPGPYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLA 240
           L GP+VLQVDEIVNI C LKGRY+ A A +KRCLKLSMTDGVQRVFGMEYRPIKDL+VLA
Sbjct: 181 LAGPFVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRPIKDLQVLA 240

Query: 241 PAGLKVVICSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVV 300
           PAGLK+V+ SV VR GLLMLVPE  EVLGG+VEELE ARKRLV EVNKPPRG+RTR GVV
Sbjct: 241 PAGLKIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNKPPRGKRTRVGVV 300

Query: 301 PPLASRATRAAWPSDNVQEPGHPSRIVDTEPSRSDQGVRMFQRGNEAFTALV------GD 360
           P L +RAT AAW S N  + G+         + S  G     + N+     V        
Sbjct: 301 PSLTTRATLAAW-SLNGNDTGNHVHDTGNHVNSSASGNASHTQANQGIPVHVTRTHNSSR 360

Query: 361 AFTTPVSRTNANSEL-----------SSNFVSNVEEIHSHS------------------I 420
           A   P++ TN  + +           S++      +IHS S                   
Sbjct: 361 AMDEPLASTNVGATVSRVEHMQIDTASAHGERTFSDIHSTSSNIHRAASTAGTGTSCSGA 420

Query: 421 PSGRASTEPTIVSNSVEDTNVVNS-----------VDDTNTVNSVDDTNMVNSVEDAIMV 480
            SG  S    +  NS++ T+ V S           V DT T     D+  V +    ++V
Sbjct: 421 CSGARSFANNVGGNSLDQTSNVTSFVEEMHIDTGRVRDTTTHIYGSDSGGVAAEFSNMVV 480

Query: 481 DIEHPLILSGDREIPFTYLASLSAKLAAVKEKSPSVRGKIKCFLTGVKGFQFKQRATYEL 540
           D+E P +LS + E PFTYLA LS K A +K+    V+G+IKCFLTGVK FQFKQ++TYEL
Sbjct: 481 DLEGPSVLSTNTEKPFTYLAELSQKWAVMKDTIHFVQGRIKCFLTGVKKFQFKQQSTYEL 540

Query: 541 HVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTGALDSS-DVKVVSVMKETMRQFQIFLIN 587
             YVDDGSLI E+L+ ++VVQK IGHS  +VT AL SS    + ++MKE +++FQ+FL +
Sbjct: 541 LCYVDDGSLICEILLHNDVVQKRIGHSSMEVTAALSSSAPTSLNAMMKEKLKRFQLFLAD 600

[Close]

BLAST of HG10008780 vs. TAIR 10
Match: AT5G63540.2 (Domain of unknown function (DUF1767) )

HSP 1 Score: 442.6 bits (1137), Expect = 5.1e-124
Identity = 297/674 (44.07%), Postives = 385/674 (57.12%), Query Frame = 0


Query: 1   MTRRRLRLSWSSDEDLEH--------DAHCPDSSPASLQPLILDNLNSHFNPNVSEPLQV 60
           M RRRL+L +SSDE+ E         D+       +S+QP    +++S+ NPN  E + +
Sbjct: 1   MRRRRLQLRYSSDEEEEDETGTSGVGDSVQSFGIASSIQP--ETSVSSNSNPNPGERIAI 60

Query: 61  PDSDDDEQDFIDVSDHLSPPSPDSDHSLPHSPHPNPLSPRLASTHPPCPVSEFLRGLGLS 120
                 E + IDV  +  P  PDS  S+P +P+P   S  ++      P+SE L  +G+ 
Sbjct: 61  -----SEVEIIDVFGNPQPTPPDS--SIP-TPYPVYPSESVSGNDYESPISEVLSRMGIK 120

Query: 121 LKREWLDVCIYALQGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVD 180
           LKREW   C+  L+ S+P F  L+ A K K CFEQF+  DMN  G GVLP NV SM+ ++
Sbjct: 121 LKREWWVSCLSGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGVLPPNVASMNRIE 180

Query: 181 LPGPYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLA 240
           L GP+VLQVDEIVNI C LKGRY+ A A +KRCLKLSMTDGVQRVFGMEYRPIKDL+VLA
Sbjct: 181 LAGPFVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRPIKDLQVLA 240

Query: 241 PAGLKVVICSVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRR------ 300
           PAGLK+V+ SV VR GLLMLVPE  EVLGG+VEELE ARKRLV EVNKPPRG+       
Sbjct: 241 PAGLKIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNKPPRGKSWKDYLQ 300

Query: 301 ---------------------------TRTGVVPPLASRATRAAWPSDNVQEPGHPSRIV 360
                                      TR GVVP L +RAT AAW S N  + G+     
Sbjct: 301 PVCFTDFFGYSFFDLENRDWFGVCLTITRVGVVPSLTTRATLAAW-SLNGNDTGNHVHDT 360

Query: 361 DTEPSRSDQGVRMFQRGNEAFTALV------GDAFTTPVSRTNANSEL-----------S 420
               + S  G     + N+     V        A   P++ TN  + +           S
Sbjct: 361 GNHVNSSASGNASHTQANQGIPVHVTRTHNSSRAMDEPLASTNVGATVSRVEHMQIDTAS 420

Query: 421 SNFVSNVEEIHSHS------------------IPSGRASTEPTIVSNSVEDTNVVNS--- 480
           ++      +IHS S                    SG  S    +  NS++ T+ V S   
Sbjct: 421 AHGERTFSDIHSTSSNIHRAASTAGTGTSCSGACSGARSFANNVGGNSLDQTSNVTSFVE 480

Query: 481 --------VDDTNTVNSVDDTNMVNSVEDAIMVDIEHPLILSGDREIPFTYLASLSAKLA 540
                   V DT T     D+  V +    ++VD+E P +LS + E PFTYLA LS K A
Sbjct: 481 EMHIDTGRVRDTTTHIYGSDSGGVAAEFSNMVVDLEGPSVLSTNTEKPFTYLAELSQKWA 540

Query: 541 AVKEKSPSVRGKIKCFLTGVKGFQFKQRATYELHVYVDDGSLISEVLIDHEVVQKAIGHS 587
            +K+    V+G+IKCFLTGVK FQFKQ++TYEL  YVDDGSLI E+L+ ++VVQK IGHS
Sbjct: 541 VMKDTIHFVQGRIKCFLTGVKKFQFKQQSTYELLCYVDDGSLICEILLHNDVVQKRIGHS 600

The following BLAST results are available for this feature:

BLAST of HG10008780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879467.1	1.2e-305	90.71	recQ-mediated genome instability protein 1 [Benincasa hispida]	[more]
XP_004138254.1	1.2e-303	89.52	recQ-mediated genome instability protein 1 isoform X1 [Cucumis sativus] >KGN6346...	[more]
XP_008464406.1	5.8e-303	90.18	PREDICTED: recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo]	[more]
TYJ98438.1	1.0e-299	89.78	recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0057758.1	6.6e-299	89.61	recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of HG10008780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XUX6	1.1e-128	46.49	RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RM...	[more]
Q7XRV0	1.7e-95	35.91	RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9H9A7	1.1e-14	25.50	RecQ-mediated genome instability protein 1 OS=Homo sapiens OX=9606 GN=RMI1 PE=1 ...	[more]
Q6DDH2	3.2e-14	24.58	RecQ-mediated genome instability protein 1 OS=Xenopus laevis OX=8355 GN=rmi1 PE=...	[more]
A4IF98	1.8e-12	30.64	RecQ-mediated genome instability protein 1 OS=Bos taurus OX=9913 GN=RMI1 PE=2 SV...	[more]

BLAST of HG10008780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNV2	5.6e-304	89.52	RecQ-mediated genome instability protein 1 OS=Cucumis sativus OX=3659 GN=Csa_1G0...	[more]
A0A1S3CLI7	2.8e-303	90.18	RecQ-mediated genome instability protein 1 OS=Cucumis melo OX=3656 GN=LOC1035023...	[more]
A0A5D3BJQ9	4.9e-300	89.78	RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7URI1	3.2e-299	89.61	RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1E2W4	1.2e-274	82.89	RecQ-mediated genome instability protein 1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of HG10008780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63540.1	8.2e-130	46.49	Domain of unknown function (DUF1767)	[more]
AT5G63540.2	5.1e-124	44.07	Domain of unknown function (DUF1767)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033472	RecQ mediated genome instability protein, DUF1767	SMART	SM01161	DUF1767_2	coord: 103..196 e-value: 6.6E-27 score: 105.4
IPR042470	RecQ mediated genome instability protein, N-terminal, subdomain 2	GENE3D	2.40.50.770		coord: 152..277 e-value: 4.7E-27 score: 96.3
IPR032199	Recq-mediated genome instability protein 1, C-terminal OB-fold domain	PFAM	PF16099	RMI1_C	coord: 441..582 e-value: 5.0E-35 score: 120.5
IPR013894	RecQ mediated genome instability protein, N-terminal	PFAM	PF08585	RMI1_N	coord: 110..273 e-value: 1.7E-34 score: 119.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..95
None	No IPR available	PANTHER	PTHR14790:SF15	RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1	coord: 98..586
IPR039215	RecQ-mediated genome instability protein 1	PANTHER	PTHR14790	RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1	coord: 98..586

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008780.1	HG10008780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0000712	resolution of meiotic recombination intermediates
cellular_component	GO:0016604	nuclear body
cellular_component	GO:0031422	RecQ family helicase-topoisomerase III complex
molecular_function	GO:0000166	nucleotide binding