HG10008378 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10008378
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionzinc finger protein VAR3, chloroplastic
LocationChr10: 22675659 .. 22679880 (-)
RNA-Seq ExpressionHG10008378
SyntenyHG10008378
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCTCCAAAGTTCCTACACATCGGCACTGCAATCTCCCGAACTACATCCAGAGCTCTATCGCCTCTCCTCTTCCCCAGAAGACTCCCGCCAAAGCTCATATCCTTCATAAAGTGCAGTTCTTCTACCGCGCTTGATTCCGCCGGCAGCGGCGGTGCTGATGCTCCCCAACCACACTCCACCCTCACTCACCACCCATGGCCTGAATGGGTTTCCTTCGTCGACGGCTTGAGGACTAAAGGTTACTTGATTGAACCTCCTTCAGAAGATGCAAACGGAGATGGGACCGGTGGTGATGCAGCTACACCATCCGTGACTGATTACAGCGACATGAACGTGTTGAAGGATGCTTGCGTCAGCTTTGCGCGCGATCGCTACGATATTTTCAAGTGAGTTTTATGTTTATAGTTGAGTTTTTGAGAATTGTCGACTAGAAATTGGACTTGATATTGACATGCCGACGGTTGCATCTTTTGGGAATGGATGTTTCGTACCTCTGAAAGTACTCTCTATTCCTCTTAAACTTGGATTGAATTGAAAGATTTTCATGGCCCTTATAGTTTAAGATTCTGGATTATCATACCTGCCTAGAATATCTTTGTTGTTCTTGGGAGGGAACTGTGGTAGTGATTAGAATCTGTTACTTTTTTCTTTGTGCAGGTCATTGTACACAGATGATATTCAAACGATTGTGAAGGATGGATGTCCCAGTCTCTTCCGGAAAGTTGTTAATTCAGCTAAAAGGCTGAGGGCTTATGTGCAACTAGATGAAGGGGACGTATGTAGTCTCACTTAAATATCGTAATTATTTTTTCATAAGTTAGATTTCCTTGTACCATGGGCTTGAGTGAGTCAATGTTGTTTAGTTTGAGAGGGAACTGAGTAAATTCAAGCATATGTCATAAGGTTTGTTTTTCATTTCAATATATCTACATTGTACAGGTTTGTAGTTCTTGCAACCTTCGAGGCTCCTGTGATAGAGCTTATGTTATCTTAAAGGAAACAGAAGCAACTGCAAGAACTGTGGATATAGCTCGATTATTGTTGACCTATGCATTGGATCCACTTGTTTTGTCTGGAGGGGACAAACCTTCGGGTAGAGAGCATGTCGAAGTCTCTGTGAGGAAATTGCTTTCTGAGCTATTGGAACTGAGTGAAACCCCCCTTGATGCAGCAGCAGTGAAGGAGGAGACAAAATCTCCCCGAAGAAAAGAAAAACCATCAAAATTTACAAATGATGCCTCAACTCAAGATGTTGAGATGAAGAGAGGAGATTGGATGTGTTCAAAGTAAGTTATATCTGAAATGTAACTTCTTTCCTTCTTTGAACTACTTTTCCATTAGCTTGAATTTCTTTGTTTCTCTTGATGTGAAAAACAAGGCTACCTTGGTAGTGGGTACTATTGTTAGGGGCTGTGCTTTGAATTAGGAGCTAGAAAGCAGGTACAAAGCTACTTTAACTTGACCAGTTTCTTCAATATTTTATTTTTTAGCATTTATTTCTCTCCTAGAGTATAGATGATTAATTTTTAAGAAGTGAAAAGTAAGCCTCGCCTAATACACTTCACAAAACAAAGGAAAATGAATGACCAATTAGACAGCAAAGATTTTCTGAAGCTCTTTCAAGGACGAGAACTAGCAGTAGATTAGTATTCATTACAGCTTGTTCTAAATATCAATTGAACTATTAATTTAATTGGTATTTGGTGGTTGATTATTCAAGAGATGATTAGATGATAAGGTTAAATAAATCTTGACGCTTATGCCCTTAACATTTTGTGTCCAATGGAATTAATTTTAGGCTGTTATCCCCATCTGTGGCTTGAAAGAGACCTTGGCCTCAACGTGAATGCTTACTCACCATTGCATTATTGCATCAGAGGAAGTTTTGGATCATGTTAAGCAATATGTCTGATTAGCATTATTTTGGAAAAGTTCAGGAAGAGATTGGATGGGTGGAGAGTTGTGTTTTTTGGGGCGAGAGATTAATTTGCATACTGTTTATTTTGTAGTGTCTACAGTGTTCTTTCCACTTCATAATTCCTTGTAGGAAACCTTATGAAGTACAAAAAGTTATATGAGCTTGTCCTGAGAATAAAAATGATTATTAAGAAGGTTGACATGAGGAAAGAAAAAAGGGAAATTAGTAAGAAGCTTGTCACGAGAAAAACATTGATATTCTTCATGAATGTTTCATCTTACCTGTAAGCTTTATATCTTTGTGTCTGATGAGATATGGAAGAGACCCAAAATCCTCTTAATTTAACTCTTGATGTTTTGATTGGAAACTTCCTTTTTGCAGATGCAATTTTTTGAATTTTTCAAGAAACAGAAGATGTTTAAAATGTAACGAAGATGGTCCTAAAAGAGTTCGAGCAGATGATATTGAAATGAAGAATGGAGATTGGATCTGTCCAAAGTAAGTACATGCTCAATCTTGCTCACACTAACAAACAATTTTTTGGTTTTTAATATTTGTATTTCTCTACTGACCTTATTGATAAACTTAATAATATTCTTATGAGTTCAGGCAATAAATATAAATTACTATTGTTTAAGAAACAAAAATTTCAATGATGTGAAAATAGCTCAGTGATGTAAATATAAATTATTATTGTACAAGATCTCTCATAGGTGTGTCATGTGTGCACTAATAGAAATACTGTTTGATTGAACAATAATTTCCTTCACCTAAAACTACCGTTGCAAGAGTTTTAGGTACAGCTTATACTGTTCTAATATGATGTAATGATGATAAGTAATATAACAGGACTTTATATCATCTTTCTGAAAATAGGCAGTTTATCTTGATTTGACAATGCTTCTTTTAAAACCGAACCATCAAATATATCCCTGATTAAATTTTACTTATTCCATTCATTTTGTAATAGGTGCAACTTTATGAACTTCTCAAGAAATATTTGCTGCTTAAAGTGCAAAACAGAGGGGCCGAGGAGGATTAATGTCGAAGAAATTGAAATGAAGAAGGGAGACTGGGTCTGCCCGCAGTAAGTTCATTACTTATCCCTATATGTCACTTCATAAATAATGATCTAGTTTTCTATTAAAGTAGGTGTCTGCAGTTACGTGCACTCACAGAAAATAGACTGTTTTATTTCACGTTTGTCTGCTGGGTCTGATTGCTCAATAATGTAATAGTTATGTCGAGATATTAGATCTGATACCAATTCTAGTACCTAGCCTAGGAGAAAAAGTAGGTCAGAGGTAAAATGGATGCTGATACCAACCTATCACTCTGATTTCTACTTCAGAAAATGATTTATTTCCTTTCTATGAACCGACTGAAAAACTGATTAATTGGTCGGAGGTAGATTTTTTTGGTCAATTGGATTGGCATTGATAGTTTGTGTAAAAAATATTCTGTGTAACAAGAGAAAATTGACAATAAGCAAAATTATGTCAAAATTTTCCGCAGTTTTTTTTATCTAAATCTAATTATGACAATGTTTAATGTATAAACTTATTTTTTATGTGATTTCTCAGTCGGATTGGAGTGTTTTGAGTTGTTTAACCAACCAATATCTGACCAATCGAGGTCAGTTTGGTCAGTTTCGTTGATTTGACATATTTTCTGCTACTTAATTTAACCCATAAATGCCTAGCGACTCTAGCCTATACTTAGAAGTTGAACTTATATCTGATGGGTTTGCATCTCTTTTCTAATTGTGCAACTTTCACGTTCATCTGTTCTTGTATTCTGTGAAATTCGTTTTCTATTTGACAATGTTGTTCTCTGCTGGTGCATTTACCCTACAGATGTACATTCATGAACTTTGCCAGTAACAAGAAATGTTTGCGTTGTCGAGAACATCGTCCGAAGAGGGAAATGAATCCAGGAGAATGGGAATGCCCCTCGTATGTTTACTCTCTCTTGAACCCTTTTATTAATTTTTTTTTTAAAATTAATGTGGGATGATGACATTGATGAGTATTCAAACCTCCAACTTTAAGATAAGAAAAGTAGAGGTTAATTATGCTGTCCTATACTGATGTCGGTTTCTTACGCACCCGTATGTTTCAATGAGCAGTTTAACCAATTTACAAGAGTACTAATGTCAAAACCTTTGGTTTCTATAGGTGTGACTTTTTGAATTACAGAGGGAACATGAGCTGCCGCAAGTGCAATGTTGAGCGTCCTAAACAAAAAATAAGTGCCGAGTATGAGGAGCAACTATGGGAGTCACCCAGGGAAAGATGA

mRNA sequence

ATGGCAGCTCCAAAGTTCCTACACATCGGCACTGCAATCTCCCGAACTACATCCAGAGCTCTATCGCCTCTCCTCTTCCCCAGAAGACTCCCGCCAAAGCTCATATCCTTCATAAAGTGCAGTTCTTCTACCGCGCTTGATTCCGCCGGCAGCGGCGGTGCTGATGCTCCCCAACCACACTCCACCCTCACTCACCACCCATGGCCTGAATGGGTTTCCTTCGTCGACGGCTTGAGGACTAAAGGTTACTTGATTGAACCTCCTTCAGAAGATGCAAACGGAGATGGGACCGGTGGTGATGCAGCTACACCATCCGTGACTGATTACAGCGACATGAACGTGTTGAAGGATGCTTGCGTCAGCTTTGCGCGCGATCGCTACGATATTTTCAAGTCATTGTACACAGATGATATTCAAACGATTGTGAAGGATGGATGTCCCAGTCTCTTCCGGAAAGTTGTTAATTCAGCTAAAAGGCTGAGGGCTTATGTGCAACTAGATGAAGGGGACGTTTGTAGTTCTTGCAACCTTCGAGGCTCCTGTGATAGAGCTTATGTTATCTTAAAGGAAACAGAAGCAACTGCAAGAACTGTGGATATAGCTCGATTATTGTTGACCTATGCATTGGATCCACTTGTTTTGTCTGGAGGGGACAAACCTTCGGGTAGAGAGCATGTCGAAGTCTCTGTGAGGAAATTGCTTTCTGAGCTATTGGAACTGAGTGAAACCCCCCTTGATGCAGCAGCAGTGAAGGAGGAGACAAAATCTCCCCGAAGAAAAGAAAAACCATCAAAATTTACAAATGATGCCTCAACTCAAGATGTTGAGATGAAGAGAGGAGATTGGATGTGTTCAAAATGCAATTTTTTGAATTTTTCAAGAAACAGAAGATGTTTAAAATGTAACGAAGATGGTCCTAAAAGAGTTCGAGCAGATGATATTGAAATGAAGAATGGAGATTGGATCTGTCCAAAGTGCAACTTTATGAACTTCTCAAGAAATATTTGCTGCTTAAAGTGCAAAACAGAGGGGCCGAGGAGGATTAATGTCGAAGAAATTGAAATGAAGAAGGGAGACTGGGTCTGCCCGCAATGTACATTCATGAACTTTGCCAGTAACAAGAAATGTTTGCGTTGTCGAGAACATCGTCCGAAGAGGGAAATGAATCCAGGAGAATGGGAATGCCCCTCGTGTGACTTTTTGAATTACAGAGGGAACATGAGCTGCCGCAAGTGCAATGTTGAGCGTCCTAAACAAAAAATAAGTGCCGAGTATGAGGAGCAACTATGGGAGTCACCCAGGGAAAGATGA

Coding sequence (CDS)

ATGGCAGCTCCAAAGTTCCTACACATCGGCACTGCAATCTCCCGAACTACATCCAGAGCTCTATCGCCTCTCCTCTTCCCCAGAAGACTCCCGCCAAAGCTCATATCCTTCATAAAGTGCAGTTCTTCTACCGCGCTTGATTCCGCCGGCAGCGGCGGTGCTGATGCTCCCCAACCACACTCCACCCTCACTCACCACCCATGGCCTGAATGGGTTTCCTTCGTCGACGGCTTGAGGACTAAAGGTTACTTGATTGAACCTCCTTCAGAAGATGCAAACGGAGATGGGACCGGTGGTGATGCAGCTACACCATCCGTGACTGATTACAGCGACATGAACGTGTTGAAGGATGCTTGCGTCAGCTTTGCGCGCGATCGCTACGATATTTTCAAGTCATTGTACACAGATGATATTCAAACGATTGTGAAGGATGGATGTCCCAGTCTCTTCCGGAAAGTTGTTAATTCAGCTAAAAGGCTGAGGGCTTATGTGCAACTAGATGAAGGGGACGTTTGTAGTTCTTGCAACCTTCGAGGCTCCTGTGATAGAGCTTATGTTATCTTAAAGGAAACAGAAGCAACTGCAAGAACTGTGGATATAGCTCGATTATTGTTGACCTATGCATTGGATCCACTTGTTTTGTCTGGAGGGGACAAACCTTCGGGTAGAGAGCATGTCGAAGTCTCTGTGAGGAAATTGCTTTCTGAGCTATTGGAACTGAGTGAAACCCCCCTTGATGCAGCAGCAGTGAAGGAGGAGACAAAATCTCCCCGAAGAAAAGAAAAACCATCAAAATTTACAAATGATGCCTCAACTCAAGATGTTGAGATGAAGAGAGGAGATTGGATGTGTTCAAAATGCAATTTTTTGAATTTTTCAAGAAACAGAAGATGTTTAAAATGTAACGAAGATGGTCCTAAAAGAGTTCGAGCAGATGATATTGAAATGAAGAATGGAGATTGGATCTGTCCAAAGTGCAACTTTATGAACTTCTCAAGAAATATTTGCTGCTTAAAGTGCAAAACAGAGGGGCCGAGGAGGATTAATGTCGAAGAAATTGAAATGAAGAAGGGAGACTGGGTCTGCCCGCAATGTACATTCATGAACTTTGCCAGTAACAAGAAATGTTTGCGTTGTCGAGAACATCGTCCGAAGAGGGAAATGAATCCAGGAGAATGGGAATGCCCCTCGTGTGACTTTTTGAATTACAGAGGGAACATGAGCTGCCGCAAGTGCAATGTTGAGCGTCCTAAACAAAAAATAAGTGCCGAGTATGAGGAGCAACTATGGGAGTCACCCAGGGAAAGATGA

Protein sequence

MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPHSTLTHHPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACVSFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGSCDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLELSETPLDAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLKCNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDWVCPQCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQKISAEYEEQLWESPRER
Homology
BLAST of HG10008378 vs. NCBI nr
Match: XP_038878457.1 (zinc finger protein VAR3, chloroplastic [Benincasa hispida])

HSP 1 Score: 847.4 bits (2188), Expect = 5.4e-242
Identity = 404/436 (92.66%), Postives = 421/436 (96.56%), Query Frame = 0

Query: 1   MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPH 60
           MAAPKFLH+GT+ISRTTSRALSPLLFPRRLPPKLISFIK  SST LDSAGSGG DAPQPH
Sbjct: 1   MAAPKFLHVGTSISRTTSRALSPLLFPRRLPPKLISFIKRISSTVLDSAGSGGPDAPQPH 60

Query: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACV 120
           STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDA  DGTGG+AATPSVTDYSDMNVLK+AC+
Sbjct: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDATEDGTGGEAATPSVTDYSDMNVLKNACI 120

Query: 121 SFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGS 180
           SFARDRYDIFKSL TDDIQTIVKDGCP+LFRKVVNSAKRLRAYVQLDEGDVCS+CNLRGS
Sbjct: 121 SFARDRYDIFKSLSTDDIQTIVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLEL 240
           CDRAYV LKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSEL EL
Sbjct: 181 CDRAYVFLKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELSEL 240

Query: 241 SETPLDAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLK 300
           SE PLD AAVK++TKSP RKEKPSKFTNDASTQDVEMKRGDWMC+KCNFLNFSRNRRCLK
Sbjct: 241 SEKPLDPAAVKDDTKSPPRKEKPSKFTNDASTQDVEMKRGDWMCTKCNFLNFSRNRRCLK 300

Query: 301 CNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDW 360
           CNEDGPKRV A+DIEMK+GDWICP+CNFMNFSRNI CLKCKTEGPR++N EEIEMKKGDW
Sbjct: 301 CNEDGPKRVWANDIEMKSGDWICPECNFMNFSRNIRCLKCKTEGPRKLNGEEIEMKKGDW 360

Query: 361 VCPQCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420
           VCPQCTFMNFA+NKKCLRCR+HRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK
Sbjct: 361 VCPQCTFMNFANNKKCLRCRKHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420

Query: 421 ISAEYEEQLWESPRER 437
           ISAEYEEQLWESPRER
Sbjct: 421 ISAEYEEQLWESPRER 436

BLAST of HG10008378 vs. NCBI nr
Match: XP_004137347.1 (zinc finger protein VAR3, chloroplastic [Cucumis sativus] >KGN63880.1 hypothetical protein Csa_013228 [Cucumis sativus])

HSP 1 Score: 793.1 bits (2047), Expect = 1.2e-225
Identity = 372/435 (85.52%), Postives = 403/435 (92.64%), Query Frame = 0

Query: 1   MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPH 60
           MAAPKFL++GTAISRTTSRALSP LFPRRLP K ISF+KCSSST LDS GSGGADAPQPH
Sbjct: 1   MAAPKFLYMGTAISRTTSRALSPFLFPRRLPSKFISFMKCSSSTVLDSVGSGGADAPQPH 60

Query: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACV 120
           STLTHHPWPEWVSFVDGL+TKGYLIEPPSEDA GDGTGG+AATP V DYSDMNVLKDACV
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYSDMNVLKDACV 120

Query: 121 SFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGS 180
           SFARDR+DIFKSL TDDIQTIVKDGCP+L RK VNSAKRLRAYVQLDEGDVCS+CNLRGS
Sbjct: 121 SFARDRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLEL 240
           CDRAYVILK+T+ TARTVD+ARLLL YALDPLVLSGGDKPSGREHVEVSVRKLLS+L EL
Sbjct: 181 CDRAYVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSEL 240

Query: 241 SETPLDAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLK 300
           SE P+D AAV+E TK P RKEK SKFT DAST+DVEMKRGDWMC+KCNFLNFSRNR CLK
Sbjct: 241 SEKPIDPAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLK 300

Query: 301 CNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDW 360
           CNEDGPKRVR +DIEMK+GDWICP+C FMNFSRNI C+KCKTEGP+++NVE+ EMKKGDW
Sbjct: 301 CNEDGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDW 360

Query: 361 VCPQCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420
           VCPQC+FMNFASNKKCLRCRE RPKRE+N GEWECP C ++N+RGNMSCRKCN ERP+Q+
Sbjct: 361 VCPQCSFMNFASNKKCLRCRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQE 420

Query: 421 ISAEYEEQLWESPRE 436
           IS EYEEQLWESPRE
Sbjct: 421 ISDEYEEQLWESPRE 435

BLAST of HG10008378 vs. NCBI nr
Match: XP_022988446.1 (zinc finger protein VAR3, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 793.1 bits (2047), Expect = 1.2e-225
Identity = 375/436 (86.01%), Postives = 405/436 (92.89%), Query Frame = 0

Query: 1   MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPH 60
           M+APKF++ GTAISRTTSRALSPLLFPRRLPPKLISFIKCSSST LDSA SGGADA Q +
Sbjct: 1   MSAPKFMYFGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTGLDSASSGGADASQSY 60

Query: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACV 120
           S LTHHPWPEWVSFVDGLRTKGYL+EP  ED NGDG+GGDA T SV DY+DMNVLKDAC+
Sbjct: 61  SGLTHHPWPEWVSFVDGLRTKGYLVEPTVEDGNGDGSGGDATTTSVNDYNDMNVLKDACL 120

Query: 121 SFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGS 180
           +FAR+RYDIFKSL TDDIQT+VKDGCP+LFRKVVNSAKRLRAYVQLDEGDVCS+CNLRGS
Sbjct: 121 NFARERYDIFKSLSTDDIQTLVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLEL 240
           C RAYVILKETEATARTVDIARLLLTYAL+P+VLSGGDKP GREHVEVS RKLLSELLEL
Sbjct: 181 CGRAYVILKETEATARTVDIARLLLTYALEPVVLSGGDKPPGREHVEVSARKLLSELLEL 240

Query: 241 SETPLDAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLK 300
           SE P+DA+AVK +TKS RRKEKPSKFT+DA +QDVEMKRGDWMC+KCNFLNFSRNR+CLK
Sbjct: 241 SEKPIDASAVKADTKSTRRKEKPSKFTDDALSQDVEMKRGDWMCTKCNFLNFSRNRKCLK 300

Query: 301 CNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDW 360
           CNEDGPKRV ADDIEMKNGDWICP+C FMNFSRN+ CLKCKTEGP++I+V EIEMKKGDW
Sbjct: 301 CNEDGPKRVHADDIEMKNGDWICPECKFMNFSRNVNCLKCKTEGPKKIDVGEIEMKKGDW 360

Query: 361 VCPQCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420
           VCP+CTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYR NM CRKC+ ERPK+ 
Sbjct: 361 VCPKCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRRNMVCRKCDGERPKRG 420

Query: 421 ISAEYEEQLWESPRER 437
            S EYEEQLWESPR R
Sbjct: 421 ASDEYEEQLWESPRGR 436

BLAST of HG10008378 vs. NCBI nr
Match: XP_008453486.1 (PREDICTED: zinc finger protein VAR3, chloroplastic [Cucumis melo] >KAA0058143.1 zinc finger protein VAR3 [Cucumis melo var. makuwa] >TYK28498.1 zinc finger protein VAR3 [Cucumis melo var. makuwa])

HSP 1 Score: 788.1 bits (2034), Expect = 3.9e-224
Identity = 371/436 (85.09%), Postives = 402/436 (92.20%), Query Frame = 0

Query: 1   MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPH 60
           MAAPKFLHIGTAISRTTS ALSP LFPRRLP KLISF+KCSSST LDS GSGGADAPQ H
Sbjct: 1   MAAPKFLHIGTAISRTTSGALSPFLFPRRLPSKLISFMKCSSSTVLDSVGSGGADAPQLH 60

Query: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACV 120
           STLTHHPWPEWVSFVDGL+TKGYLIEPPSEDA GDGTGGD ATP   DYSDMNVLKDACV
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGDEATPPANDYSDMNVLKDACV 120

Query: 121 SFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGS 180
           SFARDRYDIFKSL TDDIQTIVKDGCP++ RKVVNSAKRLRAYVQLDEGDVCS+CNLRGS
Sbjct: 121 SFARDRYDIFKSLSTDDIQTIVKDGCPNILRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLEL 240
           CDRAYVILK+T+ TARTVDIAR+LL YALDP+V+SGGDKPSGRE VEVSVRKLLSEL EL
Sbjct: 181 CDRAYVILKQTDGTARTVDIARVLLAYALDPVVMSGGDKPSGRERVEVSVRKLLSELSEL 240

Query: 241 SETPLDAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLK 300
           SE P+D AAVKE  KSP+RKEK SKF  DASTQDVEMKRGDWMC+KCNFLNF+RNRRCLK
Sbjct: 241 SEKPIDPAAVKEVIKSPKRKEKSSKFIEDASTQDVEMKRGDWMCTKCNFLNFARNRRCLK 300

Query: 301 CNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDW 360
           CNEDGPKRV  +DIEMKNGDWICP+CNFMNFSRNI C+KCKTEGP+++NV+ +EMKKGDW
Sbjct: 301 CNEDGPKRVWENDIEMKNGDWICPECNFMNFSRNIRCMKCKTEGPKKVNVDNVEMKKGDW 360

Query: 361 VCPQCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420
           VCPQC+FMNFASNKKCLRCR  RPKRE+N GEWECPSC ++N+RGN SCRKCNVERP+++
Sbjct: 361 VCPQCSFMNFASNKKCLRCRVLRPKRELNQGEWECPSCVYVNFRGNTSCRKCNVERPERE 420

Query: 421 ISAEYEEQLWESPRER 437
           IS EY+EQLWESPRER
Sbjct: 421 ISDEYDEQLWESPRER 436

BLAST of HG10008378 vs. NCBI nr
Match: KAG6589639.1 (Zinc finger protein VAR3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 783.9 bits (2023), Expect = 7.3e-223
Identity = 369/436 (84.63%), Postives = 404/436 (92.66%), Query Frame = 0

Query: 1   MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPH 60
           M+APKF++ GTAISRTTSRALSPLLFPRRLPPKLIS IKCSSST LDSA SGGADA Q +
Sbjct: 17  MSAPKFMYFGTAISRTTSRALSPLLFPRRLPPKLISLIKCSSSTGLDSASSGGADASQSY 76

Query: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACV 120
           S LTHHPWPEWVSFVD LRTKGYL+EP  EDANGDG+GGD AT SV DY+DMNVLKDAC+
Sbjct: 77  SGLTHHPWPEWVSFVDALRTKGYLVEPNVEDANGDGSGGDVATTSVNDYNDMNVLKDACL 136

Query: 121 SFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGS 180
           +FAR+RYD+FKSL TDDIQT+VKDGCP+LFRKVVNSAKRLRAYVQLDEGDVCS+CNLRGS
Sbjct: 137 NFARERYDVFKSLSTDDIQTLVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 196

Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLEL 240
           C RAYVILKETEATARTVD+ARLLLTYAL+P+VLSGGDKP GREHVEVS RKLLSELLEL
Sbjct: 197 CGRAYVILKETEATARTVDVARLLLTYALEPVVLSGGDKPPGREHVEVSARKLLSELLEL 256

Query: 241 SETPLDAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLK 300
           SE P+DA+AVK +TKS RRKEKPSKFT+DA +Q+VEMKRGDWMC+KCNFLNFSRNR+CLK
Sbjct: 257 SEKPIDASAVKPDTKSTRRKEKPSKFTDDALSQNVEMKRGDWMCTKCNFLNFSRNRKCLK 316

Query: 301 CNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDW 360
           CNEDGPKRVRADDIEMKNGDWICP+CNFMNFSRN+ CLKCKTE P++I+V EIEMKKGDW
Sbjct: 317 CNEDGPKRVRADDIEMKNGDWICPECNFMNFSRNVNCLKCKTERPKKIDVGEIEMKKGDW 376

Query: 361 VCPQCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420
           +CP+CTFMNFASNKKCLRCREHRPKREMNPGEW+CPSCDFLNYR NM CR+C+ ERPK  
Sbjct: 377 ICPKCTFMNFASNKKCLRCREHRPKREMNPGEWKCPSCDFLNYRPNMVCRQCDGERPKGG 436

Query: 421 ISAEYEEQLWESPRER 437
            S EYEEQLWESPR R
Sbjct: 437 ASEEYEEQLWESPRGR 452

BLAST of HG10008378 vs. ExPASy Swiss-Prot
Match: Q8S9K3 (Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 PE=1 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 2.3e-30
Identity = 89/284 (31.34%), Postives = 145/284 (51.06%), Query Frame = 0

Query: 69  PEWVSFVDGLRTKGYLIEPPS----EDANGDGTGGDAATPSVTDYSDMNVLKDACVSFAR 128
           PEW   +  L   GY  +  S    E     G   +   P++           AC++ AR
Sbjct: 93  PEWTELLQSLSKAGYFSDSGSISGLESEFFPGFPDELLRPAL-----------ACLALAR 152

Query: 129 DRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGSCDRA 188
           +R ++ + L   D++ +V++G P LF+   +S KR+  Y++           L+G     
Sbjct: 153 ERPELLEMLSRRDVEVLVENGKPFLFKTGPDSLKRMSLYLR---------SGLQGIGK-- 212

Query: 189 YVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLELSETP 248
              L + E  A TVD+ RL+L+Y +D +  S   K   +E +E SVR LLS++ ++S  P
Sbjct: 213 ---LMDME-KASTVDLMRLILSYVVD-VASSEESKQHNKEIMESSVRSLLSQIAKMSLRP 272

Query: 249 LDAAA--VKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLKCN 308
            ++      +   S R  +    F N     +VEMKRGDW+CS+C+ +NF+RN +C +C+
Sbjct: 273 PESNVHDTMQNQYSDRDGQGVRSFQN-----NVEMKRGDWICSRCSGMNFARNVKCFQCD 332

Query: 309 EDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPR 347
           E  PKR      ++   +W CP+C+F N+ RN+ CL+C  + PR
Sbjct: 333 EARPKR------QLTGSEWECPQCDFYNYGRNVACLRCDCKRPR 338

BLAST of HG10008378 vs. ExPASy TrEMBL
Match: A0A6J1JH77 (zinc finger protein VAR3, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485691 PE=4 SV=1)

HSP 1 Score: 793.1 bits (2047), Expect = 5.8e-226
Identity = 375/436 (86.01%), Postives = 405/436 (92.89%), Query Frame = 0

Query: 1   MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPH 60
           M+APKF++ GTAISRTTSRALSPLLFPRRLPPKLISFIKCSSST LDSA SGGADA Q +
Sbjct: 1   MSAPKFMYFGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTGLDSASSGGADASQSY 60

Query: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACV 120
           S LTHHPWPEWVSFVDGLRTKGYL+EP  ED NGDG+GGDA T SV DY+DMNVLKDAC+
Sbjct: 61  SGLTHHPWPEWVSFVDGLRTKGYLVEPTVEDGNGDGSGGDATTTSVNDYNDMNVLKDACL 120

Query: 121 SFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGS 180
           +FAR+RYDIFKSL TDDIQT+VKDGCP+LFRKVVNSAKRLRAYVQLDEGDVCS+CNLRGS
Sbjct: 121 NFARERYDIFKSLSTDDIQTLVKDGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLEL 240
           C RAYVILKETEATARTVDIARLLLTYAL+P+VLSGGDKP GREHVEVS RKLLSELLEL
Sbjct: 181 CGRAYVILKETEATARTVDIARLLLTYALEPVVLSGGDKPPGREHVEVSARKLLSELLEL 240

Query: 241 SETPLDAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLK 300
           SE P+DA+AVK +TKS RRKEKPSKFT+DA +QDVEMKRGDWMC+KCNFLNFSRNR+CLK
Sbjct: 241 SEKPIDASAVKADTKSTRRKEKPSKFTDDALSQDVEMKRGDWMCTKCNFLNFSRNRKCLK 300

Query: 301 CNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDW 360
           CNEDGPKRV ADDIEMKNGDWICP+C FMNFSRN+ CLKCKTEGP++I+V EIEMKKGDW
Sbjct: 301 CNEDGPKRVHADDIEMKNGDWICPECKFMNFSRNVNCLKCKTEGPKKIDVGEIEMKKGDW 360

Query: 361 VCPQCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420
           VCP+CTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYR NM CRKC+ ERPK+ 
Sbjct: 361 VCPKCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRRNMVCRKCDGERPKRG 420

Query: 421 ISAEYEEQLWESPRER 437
            S EYEEQLWESPR R
Sbjct: 421 ASDEYEEQLWESPRGR 436

BLAST of HG10008378 vs. ExPASy TrEMBL
Match: A0A0A0LPQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025120 PE=4 SV=1)

HSP 1 Score: 793.1 bits (2047), Expect = 5.8e-226
Identity = 372/435 (85.52%), Postives = 403/435 (92.64%), Query Frame = 0

Query: 1   MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPH 60
           MAAPKFL++GTAISRTTSRALSP LFPRRLP K ISF+KCSSST LDS GSGGADAPQPH
Sbjct: 1   MAAPKFLYMGTAISRTTSRALSPFLFPRRLPSKFISFMKCSSSTVLDSVGSGGADAPQPH 60

Query: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACV 120
           STLTHHPWPEWVSFVDGL+TKGYLIEPPSEDA GDGTGG+AATP V DYSDMNVLKDACV
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYSDMNVLKDACV 120

Query: 121 SFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGS 180
           SFARDR+DIFKSL TDDIQTIVKDGCP+L RK VNSAKRLRAYVQLDEGDVCS+CNLRGS
Sbjct: 121 SFARDRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLEL 240
           CDRAYVILK+T+ TARTVD+ARLLL YALDPLVLSGGDKPSGREHVEVSVRKLLS+L EL
Sbjct: 181 CDRAYVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSEL 240

Query: 241 SETPLDAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLK 300
           SE P+D AAV+E TK P RKEK SKFT DAST+DVEMKRGDWMC+KCNFLNFSRNR CLK
Sbjct: 241 SEKPIDPAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLK 300

Query: 301 CNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDW 360
           CNEDGPKRVR +DIEMK+GDWICP+C FMNFSRNI C+KCKTEGP+++NVE+ EMKKGDW
Sbjct: 301 CNEDGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDW 360

Query: 361 VCPQCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420
           VCPQC+FMNFASNKKCLRCRE RPKRE+N GEWECP C ++N+RGNMSCRKCN ERP+Q+
Sbjct: 361 VCPQCSFMNFASNKKCLRCRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQE 420

Query: 421 ISAEYEEQLWESPRE 436
           IS EYEEQLWESPRE
Sbjct: 421 ISDEYEEQLWESPRE 435

BLAST of HG10008378 vs. ExPASy TrEMBL
Match: A0A5D3DYH9 (Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001330 PE=4 SV=1)

HSP 1 Score: 788.1 bits (2034), Expect = 1.9e-224
Identity = 371/436 (85.09%), Postives = 402/436 (92.20%), Query Frame = 0

Query: 1   MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPH 60
           MAAPKFLHIGTAISRTTS ALSP LFPRRLP KLISF+KCSSST LDS GSGGADAPQ H
Sbjct: 1   MAAPKFLHIGTAISRTTSGALSPFLFPRRLPSKLISFMKCSSSTVLDSVGSGGADAPQLH 60

Query: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACV 120
           STLTHHPWPEWVSFVDGL+TKGYLIEPPSEDA GDGTGGD ATP   DYSDMNVLKDACV
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGDEATPPANDYSDMNVLKDACV 120

Query: 121 SFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGS 180
           SFARDRYDIFKSL TDDIQTIVKDGCP++ RKVVNSAKRLRAYVQLDEGDVCS+CNLRGS
Sbjct: 121 SFARDRYDIFKSLSTDDIQTIVKDGCPNILRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLEL 240
           CDRAYVILK+T+ TARTVDIAR+LL YALDP+V+SGGDKPSGRE VEVSVRKLLSEL EL
Sbjct: 181 CDRAYVILKQTDGTARTVDIARVLLAYALDPVVMSGGDKPSGRERVEVSVRKLLSELSEL 240

Query: 241 SETPLDAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLK 300
           SE P+D AAVKE  KSP+RKEK SKF  DASTQDVEMKRGDWMC+KCNFLNF+RNRRCLK
Sbjct: 241 SEKPIDPAAVKEVIKSPKRKEKSSKFIEDASTQDVEMKRGDWMCTKCNFLNFARNRRCLK 300

Query: 301 CNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDW 360
           CNEDGPKRV  +DIEMKNGDWICP+CNFMNFSRNI C+KCKTEGP+++NV+ +EMKKGDW
Sbjct: 301 CNEDGPKRVWENDIEMKNGDWICPECNFMNFSRNIRCMKCKTEGPKKVNVDNVEMKKGDW 360

Query: 361 VCPQCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420
           VCPQC+FMNFASNKKCLRCR  RPKRE+N GEWECPSC ++N+RGN SCRKCNVERP+++
Sbjct: 361 VCPQCSFMNFASNKKCLRCRVLRPKRELNQGEWECPSCVYVNFRGNTSCRKCNVERPERE 420

Query: 421 ISAEYEEQLWESPRER 437
           IS EY+EQLWESPRER
Sbjct: 421 ISDEYDEQLWESPRER 436

BLAST of HG10008378 vs. ExPASy TrEMBL
Match: A0A1S3BX61 (zinc finger protein VAR3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494186 PE=4 SV=1)

HSP 1 Score: 788.1 bits (2034), Expect = 1.9e-224
Identity = 371/436 (85.09%), Postives = 402/436 (92.20%), Query Frame = 0

Query: 1   MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPH 60
           MAAPKFLHIGTAISRTTS ALSP LFPRRLP KLISF+KCSSST LDS GSGGADAPQ H
Sbjct: 1   MAAPKFLHIGTAISRTTSGALSPFLFPRRLPSKLISFMKCSSSTVLDSVGSGGADAPQLH 60

Query: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACV 120
           STLTHHPWPEWVSFVDGL+TKGYLIEPPSEDA GDGTGGD ATP   DYSDMNVLKDACV
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGDEATPPANDYSDMNVLKDACV 120

Query: 121 SFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGS 180
           SFARDRYDIFKSL TDDIQTIVKDGCP++ RKVVNSAKRLRAYVQLDEGDVCS+CNLRGS
Sbjct: 121 SFARDRYDIFKSLSTDDIQTIVKDGCPNILRKVVNSAKRLRAYVQLDEGDVCSTCNLRGS 180

Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLEL 240
           CDRAYVILK+T+ TARTVDIAR+LL YALDP+V+SGGDKPSGRE VEVSVRKLLSEL EL
Sbjct: 181 CDRAYVILKQTDGTARTVDIARVLLAYALDPVVMSGGDKPSGRERVEVSVRKLLSELSEL 240

Query: 241 SETPLDAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLK 300
           SE P+D AAVKE  KSP+RKEK SKF  DASTQDVEMKRGDWMC+KCNFLNF+RNRRCLK
Sbjct: 241 SEKPIDPAAVKEVIKSPKRKEKSSKFIEDASTQDVEMKRGDWMCTKCNFLNFARNRRCLK 300

Query: 301 CNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDW 360
           CNEDGPKRV  +DIEMKNGDWICP+CNFMNFSRNI C+KCKTEGP+++NV+ +EMKKGDW
Sbjct: 301 CNEDGPKRVWENDIEMKNGDWICPECNFMNFSRNIRCMKCKTEGPKKVNVDNVEMKKGDW 360

Query: 361 VCPQCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQK 420
           VCPQC+FMNFASNKKCLRCR  RPKRE+N GEWECPSC ++N+RGN SCRKCNVERP+++
Sbjct: 361 VCPQCSFMNFASNKKCLRCRVLRPKRELNQGEWECPSCVYVNFRGNTSCRKCNVERPERE 420

Query: 421 ISAEYEEQLWESPRER 437
           IS EY+EQLWESPRER
Sbjct: 421 ISDEYDEQLWESPRER 436

BLAST of HG10008378 vs. ExPASy TrEMBL
Match: A0A6J1C0Y6 (zinc finger protein VAR3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007446 PE=4 SV=1)

HSP 1 Score: 773.5 bits (1996), Expect = 4.8e-220
Identity = 368/437 (84.21%), Postives = 399/437 (91.30%), Query Frame = 0

Query: 1   MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPH 60
           M+APKFL+ GTAISRTTSRALSPLL PRR PPKL+ F+ CSSSTA DSA SGGADAPQ  
Sbjct: 1   MSAPKFLYFGTAISRTTSRALSPLLLPRRFPPKLLRFVNCSSSTAPDSATSGGADAPQQL 60

Query: 61  STLTHHPWPEWVSFVDGLRTKGYLIE-PPSEDANGDGTGGDAATPSVTDYSDMNVLKDAC 120
           STLTHHPWPEWVSFVDGL+TKGYL E  PSEDA+G G GGD AT S   YSDMNVLKDAC
Sbjct: 61  STLTHHPWPEWVSFVDGLKTKGYLTESSPSEDADGGGGGGDGATASENVYSDMNVLKDAC 120

Query: 121 VSFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRG 180
           +SFARDRYD+FKSL TDDIQT+VK GCP+LFRKVVNSAKRLRAYVQLDEGDVCS+CNLRG
Sbjct: 121 LSFARDRYDVFKSLSTDDIQTVVKGGCPNLFRKVVNSAKRLRAYVQLDEGDVCSTCNLRG 180

Query: 181 SCDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLE 240
           SCDRAYVILKE EATARTVDIAR+LLTYALDPLVLSGGDKP GREHVEVSVRKLLS+L E
Sbjct: 181 SCDRAYVILKEPEATARTVDIARMLLTYALDPLVLSGGDKPLGREHVEVSVRKLLSKLSE 240

Query: 241 LSETPLDAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCL 300
           LSE PLD+A  K +TKSP RKEK SKFTNDA ++DVEMKRGDWMC+KCNFLNFSRNRRCL
Sbjct: 241 LSEKPLDSAIEKADTKSPSRKEKTSKFTNDALSKDVEMKRGDWMCTKCNFLNFSRNRRCL 300

Query: 301 KCNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGD 360
           +CNEDGPKRVRAD+IEMK+GDW CP+CNFMNFSRNI CLKCK EGP+R+N +EIEMKKGD
Sbjct: 301 ECNEDGPKRVRADEIEMKSGDWTCPECNFMNFSRNIRCLKCKAEGPKRMNDDEIEMKKGD 360

Query: 361 WVCPQCTFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQ 420
           W+CPQC FMNFASNKKCLRCREHRPKR++NPGEWECPSCDFLNYR NMSCRKCN ERPKQ
Sbjct: 361 WICPQCAFMNFASNKKCLRCREHRPKRDLNPGEWECPSCDFLNYRRNMSCRKCNGERPKQ 420

Query: 421 KISAEYEEQLWESPRER 437
           +IS+EYE+QLWESPRER
Sbjct: 421 EISSEYEDQLWESPRER 437

BLAST of HG10008378 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 397.9 bits (1021), Expect = 1.1e-110
Identity = 214/476 (44.96%), Postives = 288/476 (60.50%), Query Frame = 0

Query: 1   MAAPKFLHIGTAISRTTSRALSPLLFPRRLPPKLISFIKCSSSTALDSAGSGGADAPQPH 60
           M++ +   +G +I R    +  PL F  R P   + F   SS  A   A +  +D+P   
Sbjct: 1   MSSSRIFLVGNSIFRPHKPSF-PLSF-NRFPSVSLRFRCFSSDAAAAVATTVDSDSP--- 60

Query: 61  STLTHHPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACV 120
            +LT HPWPEW++FVD L+TKGY  +   +D               T Y +M ++KDAC+
Sbjct: 61  -SLTPHPWPEWITFVDRLKTKGYFTKDTEDD---------------TVYQEMILVKDACL 120

Query: 121 SFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGS 180
           SFARDRYD+ +SL + D+Q +V+ GCP+LFRK VNS+KR+RA+V+L+EGDVC SC+LR S
Sbjct: 121 SFARDRYDVLRSLSSGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCGSCDLRSS 180

Query: 181 CDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLEL 240
           CDRAYVILK+TEA ARTVD+ RLLL  ALD +V+S G+ P G+E V  S R+LL EL+E 
Sbjct: 181 CDRAYVILKDTEADARTVDVMRLLLFNALDSIVISRGEVPPGKELVHESARRLLLELVEF 240

Query: 241 SETPLDAAAVKEETKS------------------------------------PRRKEKPS 300
           SE PL  A  K  +K                                       R ++PS
Sbjct: 241 SEKPLIPALPKPSSKESSLPSKERAFKSRNDEPSQRVAFKSRNDDPSQRVAFKSRNDEPS 300

Query: 301 -----KFTNDASTQ-DVEMKRGDWMCSKCNFLNFSRNRRCLKCNEDGPKRVRADDIEMKN 360
                K  ND S+Q D  +   DW C KC+F+NF+RN RC +CNE   +R  A    +K 
Sbjct: 301 HRVAFKSRNDESSQRDRPLYSADWACPKCDFVNFARNERCRECNEVADRRPVA--AVVKE 360

Query: 361 GDWICPKCNFMNFSRNICCLKCKTEGPRRIN-VEEIEMKKGDWVCPQCTFMNFASNKKCL 420
           GDW+CP+C+F+NF+RN  CLKCK +GP++ + V  +EMKKGDW C  C +MNFASNK+C 
Sbjct: 361 GDWLCPECSFLNFTRNQSCLKCKAKGPKKTSMVNIVEMKKGDWNCTGCGYMNFASNKQCR 420

Query: 421 RCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPKQKISAEYEEQLWESP 434
            CRE R K    PG+WECPSCDF+N+R N +C+KC  +RP Q  + + E+  W+ P
Sbjct: 421 ECREQRHKTLAEPGDWECPSCDFVNFRRNDACKKCECKRPSQ-ANNDQEDHTWKRP 452

BLAST of HG10008378 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-67
Identity = 135/353 (38.24%), Postives = 199/353 (56.37%), Query Frame = 0

Query: 66  HPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACVSFARD 125
           HPWPEW+  +  L  KGY  E              +  P ++   + N ++ AC++FAR 
Sbjct: 44  HPWPEWLDLMGMLAKKGYFEE--------------SLIPLMSS-KESNHIRTACLNFARH 103

Query: 126 RYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGSCDRAY 185
           R+ + ++L   DI+ I   GCPS  RKVVNS KRLRAYV +DEG+VC SCNLRG C+RAY
Sbjct: 104 RFTLVRNLSKKDIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAY 163

Query: 186 VILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLELSETPL 245
              ++ E  ART+D+ RLLLTY LD +  +  ++    + VE SVRKLL E +  S T  
Sbjct: 164 AQARDDEG-ARTIDVMRLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDF 223

Query: 246 DAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLKCNEDG 305
           ++A    ET++   + +P+  + D   +D   + GDW C++C FLNF++N RCL+C+   
Sbjct: 224 ESA----ETETAGDELQPN--SQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFS 283

Query: 306 PKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDWVCPQC 365
            +R++    E K                                 + + +KKGDW+C  C
Sbjct: 284 EERLKQLKEEQK---------------------------------DHLPLKKGDWICQTC 341

Query: 366 TFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPK 419
            F+NF+ N +CLRC++    R++NPGEWEC SC+++N+R N  C KC+ +R K
Sbjct: 344 NFLNFSKNTRCLRCKDKPTLRQINPGEWECESCNYINFRRNSICLKCDHKRQK 341

BLAST of HG10008378 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-67
Identity = 135/353 (38.24%), Postives = 199/353 (56.37%), Query Frame = 0

Query: 66  HPWPEWVSFVDGLRTKGYLIEPPSEDANGDGTGGDAATPSVTDYSDMNVLKDACVSFARD 125
           HPWPEW+  +  L  KGY  E              +  P ++   + N ++ AC++FAR 
Sbjct: 44  HPWPEWLDLMGMLAKKGYFEE--------------SLIPLMSS-KESNHIRTACLNFARH 103

Query: 126 RYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGSCDRAY 185
           R+ + ++L   DI+ I   GCPS  RKVVNS KRLRAYV +DEG+VC SCNLRG C+RAY
Sbjct: 104 RFTLVRNLSKKDIKVIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAY 163

Query: 186 VILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLELSETPL 245
              ++ E  ART+D+ RLLLTY LD +  +  ++    + VE SVRKLL E +  S T  
Sbjct: 164 AQARDDEG-ARTIDVMRLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLTDF 223

Query: 246 DAAAVKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLKCNEDG 305
           ++A    ET++   + +P+  + D   +D   + GDW C++C FLNF++N RCL+C+   
Sbjct: 224 ESA----ETETAGDELQPN--SQDIDERDPRKRPGDWYCTECKFLNFAKNIRCLRCDVFS 283

Query: 306 PKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPRRINVEEIEMKKGDWVCPQC 365
            +R++    E K                                 + + +KKGDW+C  C
Sbjct: 284 EERLKQLKEEQK---------------------------------DHLPLKKGDWICQTC 341

Query: 366 TFMNFASNKKCLRCREHRPKREMNPGEWECPSCDFLNYRGNMSCRKCNVERPK 419
            F+NF+ N +CLRC++    R++NPGEWEC SC+++N+R N  C KC+ +R K
Sbjct: 344 NFLNFSKNTRCLRCKDKPTLRQINPGEWECESCNYINFRRNSICLKCDHKRQK 341

BLAST of HG10008378 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 220.3 bits (560), Expect = 3.0e-57
Identity = 117/294 (39.80%), Postives = 170/294 (57.82%), Query Frame = 0

Query: 66  HPWPEWVSFVDGLRTKGY-----------LIEPPSEDANGDGTGGDAATPSVTDYSDMNV 125
           HPWPEW+  ++ L  + Y           ++     D +  G G D     V  + D   
Sbjct: 147 HPWPEWMELMERLVKQNYFDHRRERDDDDMVNSLGIDVSSVGLGED-ENVGVALFQDFRA 206

Query: 126 LKDACVSFARDRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSS 185
           +++AC +F +DR+DI +SL  +DIQ +V  GCP+  RKVV S K LR  V LDEGDVCSS
Sbjct: 207 VQNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSS 266

Query: 186 CNLRGSCDRAYVILKETEATARTVDIARLLLTYALDPLVLSGGDKP-SGREHVEVSVRKL 245
           C+LR SC++A+ +L   E  ART+D+ R+L TY  DPL  +  +K    ++ V+  VRKL
Sbjct: 267 CSLRNSCEKAF-LLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRKL 326

Query: 246 LSELLELSETPLDAAAVKEETK--SPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLN 305
           L E+++LS  P+D        K   P+ K+ P          DVEMK+GDW+C KC+F+N
Sbjct: 327 LHEIVKLSAVPIDPNLTPPVIKRAPPKVKQPPPTPKRRVGRDDVEMKKGDWLCPKCDFMN 386

Query: 306 FSRNRRCLKCNEDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGP 346
           F++N  CL+C+   PKR      ++  G+W CP+CNF+N+ RN+ C  C  + P
Sbjct: 387 FAKNTICLQCDAKRPKR------QLLPGEWECPECNFLNYRRNMACFHCDCKRP 432

BLAST of HG10008378 vs. TAIR 10
Match: AT5G17790.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-31
Identity = 89/284 (31.34%), Postives = 145/284 (51.06%), Query Frame = 0

Query: 69  PEWVSFVDGLRTKGYLIEPPS----EDANGDGTGGDAATPSVTDYSDMNVLKDACVSFAR 128
           PEW   +  L   GY  +  S    E     G   +   P++           AC++ AR
Sbjct: 93  PEWTELLQSLSKAGYFSDSGSISGLESEFFPGFPDELLRPAL-----------ACLALAR 152

Query: 129 DRYDIFKSLYTDDIQTIVKDGCPSLFRKVVNSAKRLRAYVQLDEGDVCSSCNLRGSCDRA 188
           +R ++ + L   D++ +V++G P LF+   +S KR+  Y++           L+G     
Sbjct: 153 ERPELLEMLSRRDVEVLVENGKPFLFKTGPDSLKRMSLYLR---------SGLQGIGK-- 212

Query: 189 YVILKETEATARTVDIARLLLTYALDPLVLSGGDKPSGREHVEVSVRKLLSELLELSETP 248
              L + E  A TVD+ RL+L+Y +D +  S   K   +E +E SVR LLS++ ++S  P
Sbjct: 213 ---LMDME-KASTVDLMRLILSYVVD-VASSEESKQHNKEIMESSVRSLLSQIAKMSLRP 272

Query: 249 LDAAA--VKEETKSPRRKEKPSKFTNDASTQDVEMKRGDWMCSKCNFLNFSRNRRCLKCN 308
            ++      +   S R  +    F N     +VEMKRGDW+CS+C+ +NF+RN +C +C+
Sbjct: 273 PESNVHDTMQNQYSDRDGQGVRSFQN-----NVEMKRGDWICSRCSGMNFARNVKCFQCD 332

Query: 309 EDGPKRVRADDIEMKNGDWICPKCNFMNFSRNICCLKCKTEGPR 347
           E  PKR      ++   +W CP+C+F N+ RN+ CL+C  + PR
Sbjct: 333 EARPKR------QLTGSEWECPQCDFYNYGRNVACLRCDCKRPR 338

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038878457.15.4e-24292.66zinc finger protein VAR3, chloroplastic [Benincasa hispida][more]
XP_004137347.11.2e-22585.52zinc finger protein VAR3, chloroplastic [Cucumis sativus] >KGN63880.1 hypothetic... [more]
XP_022988446.11.2e-22586.01zinc finger protein VAR3, chloroplastic isoform X1 [Cucurbita maxima][more]
XP_008453486.13.9e-22485.09PREDICTED: zinc finger protein VAR3, chloroplastic [Cucumis melo] >KAA0058143.1 ... [more]
KAG6589639.17.3e-22384.63Zinc finger protein VAR3, chloroplastic, partial [Cucurbita argyrosperma subsp. ... [more]
Match NameE-valueIdentityDescription
Q8S9K32.3e-3031.34Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 ... [more]
Match NameE-valueIdentityDescription
A0A6J1JH775.8e-22686.01zinc finger protein VAR3, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 G... [more]
A0A0A0LPQ65.8e-22685.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025120 PE=4 SV=1[more]
A0A5D3DYH91.9e-22485.09Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3BX611.9e-22485.09zinc finger protein VAR3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494186 ... [more]
A0A6J1C0Y64.8e-22084.21zinc finger protein VAR3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111... [more]
Match NameE-valueIdentityDescription
AT1G48570.11.1e-11044.96zinc finger (Ran-binding) family protein [more]
AT1G70650.11.4e-6738.24Ran BP2/NZF zinc finger-like superfamily protein [more]
AT1G70650.21.4e-6738.24Ran BP2/NZF zinc finger-like superfamily protein [more]
AT1G55040.13.0e-5739.80zinc finger (Ran-binding) family protein [more]
AT5G17790.11.7e-3131.34zinc finger (Ran-binding) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 391..415
e-value: 0.032
score: 23.4
coord: 280..304
e-value: 1.9E-5
score: 34.1
coord: 358..382
e-value: 1.4E-6
score: 37.8
coord: 319..343
e-value: 1.2E-4
score: 31.5
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 356..383
e-value: 1.4E-8
score: 33.9
coord: 317..345
e-value: 9.0E-7
score: 28.1
coord: 279..301
e-value: 0.0016
score: 17.7
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 393..412
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 360..379
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 282..301
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 356..385
score: 10.477673
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 389..418
score: 9.404914
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 317..346
score: 9.483959
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 278..307
score: 9.619466
NoneNo IPR availableGENE3D4.10.1060.10coord: 348..385
e-value: 3.6E-14
score: 53.8
coord: 386..420
e-value: 3.6E-9
score: 37.7
coord: 269..307
e-value: 3.1E-12
score: 47.5
coord: 308..347
e-value: 2.0E-12
score: 48.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..273
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 43..347
coord: 341..431
NoneNo IPR availablePANTHERPTHR23111:SF40ASPARAGINE-RICH PROTEINcoord: 341..431
NoneNo IPR availablePANTHERPTHR23111:SF40ASPARAGINE-RICH PROTEINcoord: 43..347
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 270..306
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 352..385
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 312..344
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 387..419

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10008378.1HG10008378.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding