HG10008231 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATGAATAAAGGTCCATTAGTATTTTGGTTGATTTGGGGTTTGTTGATTTGGGTTAGATTGAGTTATGGCAACAAAATTGAAGGGGAAGAGGAGGAAATTATGAATGGAAATTGGACGAGTACCAAAGTTAATTTGATACATGTAGGAGCTGTTGTTGATGAAGTGAGTCCATCAATTGGTGGGGCGGCACAAAAATGCATACAAATGGCACTGACCGATTTCTATGCATTTCATCCCAATTTTCATAATAAATTGGTTGTACATTTCAGAGACTCACAGGACGTGGTTGCCGCAACCTCCGCCGGTGAGTTCAAACTTCAAACAACCTCTCCTTTTTCCTTCTGTTCATTCTAATCCAATGTGCCTCCAAACCCACGGGACAAATCACATAGAAAGATTTTAAACCCTTTACTATATTCATGAGTATCCGAATACAACATTTAGTTGTCGAGAAAATCCATAAATTGAATCTATAGTCTCTTACCTCTTTATCATATTTATCACTAAAATCGGTAAATAACATGGGTGGATTTACTTGTAACTGAAAAACTATGTTAGAAAAAACTTAAAACAAAGTGTATCATTTAAAACACTCTTTTGAAAAGCAGTTTAAATGTAGTCTCAGATAAAATATCATAAATATTTTATTCTTAAAAAGACACGTTACTATAAAAAGAAATATAAAAAAAAAAAAAAAAAGTGCTATGCAAAACTATAAATTGAATAATTAACTTGGGATGTGGTCAAACATTAACAAATACATAACTTAAGAGCTAAGTAACAAACCAATGAAGAGAAAATTATCACTTAATCTTTTTGGGCAACTATAGTTAATGCAACTTTAGGTATAATTGTATCAATTTAAACAATTTTGAGATTATAACAATTTAAATTCGAATTAATAATTGTTTCAATTTAAATCTTTAAATTCGAAATTTTCATCATTGCATCAATTTAAACTCTTTGTTATGTTCTATTTGAATACACTTATGAATGTTAAAGATATAAATTAATATTTTTCATAATTTTTTTCAAAGGGATGTTTATTTTGTATTAGTTCAACTTTATAGTTCATTTAATAGATAAATGATGTTGATAATGATATTGTTATTGATAATATGCACATATGTTTTTGTAGTTGTGGATTTAGTGAAGAACGAAAAAGTGCATGCAATAATAGGGCCAGAGAGTTCAGGCGAGGCAACATTTATGATAAAGCTAGGCGAAAAATCTCGCGTCCCCATCATTTCATTTTCAGCCACAAGCCTCTCTATTTCTCCATCACAGAGCCCCTTCTTCGTTCGAACTGCCCAAAACGATTCTTCTCAAGTCAAAGCCATCACCACCATCGTCCAAGGATTTGGCTGGCACGAGCTCGTTCTCATCTATGAAGACACTGAATATGGCAAAGGCCTCATCCCTTTCCTCACCGATGCACTTCAAAAATCAAACATTCGAGTCCCTTTCAAATACGCCATTCCCACTTCCATGGATCCTTACGAAATCTCCAAACACCTCCATCAGATGAAGAACAGGCAAACCAGAGTTTTCTTGGTGCACGTCACTTCCCCATTTGGGTCTGCTCTGTTTCCACTGGTGGAAAAAGCTGGAATGATGACCGAAGGCTATGCTTGGCTTCTCACCAACGCTCTCTCCAATTGTCTTGACGCAATGAGTCCTCTGGTTATTAAATCAATGGAGGGTGTTTTGGGGATACGCCCGCATTTTCCTGCTTCAGAAGCGTTGGAGAATTTCAAGAGGAGATGGAAATGGTCGGCACCTGAGTTAAACATCTATGGTTTGTGGGCTTATGATACCATTTGGGCTTTGGCTATGGCGGCGGAGAGGATTGGGGAAGTGGAAAATCTAGGGTTTATAAATGGTCGGGGAAGTGATGTAAAGGGGAAAACAGATATTGCGAATTTGGGGGTTTCGGAAGTGGGTCCAATGTTGTTGAAAGAGATGTTGAATATCAAATTTAAGGGTTTGAGTGGGGATTTCCATATGGTTAATGGGCATTTACAGCCATCGGCTTTTGAAATATTCAATGTGATTGGGAGAGCAGAGAGATTGATTGGGTGTTGGAGTCCTGAAGAAGGGATTTGTCAAAACATAGCGAATAAGAGACCTAATGAAAAATACTCCACTTCAGTTAGTAAGCTGAAGAAGATAATATGGCCTGGAGACTCCATAACTGCACCAAAAGGATGGGCTGTGCCTGCTGATGGAGAAAAATTTAGAATAGGGGTTCCCAAAAAACAAGGATTCAATGAGTTCTTGGATGTTACTAGAAACCCTCAAACAGGGGAGCTCAATTATTCTGGGTTTTGCATAGATGTCTTCAGAGCTGTTGCTGATGCTTTGCCTTTTCCTCTTCCTTATGAATTTGAGCTCTTCAAAGATGAAGCTGGGGACAGCTCTGTTATTTATGATGACCTCCTCCACCAACTCACCGAGAGCAACAAGGTCAGTGCTCTCCAATTTTATTTTCATCAGAGTTATTGCTTTGTAGCCATGTCCACCAGTCAGTCCCACAATTTGCGTCCATAGCTTGCTTCTCTCAAAATTTTCAAAACTGGGGAGGATATATATTTACAGTTTCCCTTTTCTTTTTTTTTTTTTTTTTTTTCTTTTTTACATATCATGATCAAGATTCAATTCGATTTCTCAATATTCTGCTCACTTCTTATGAAGAAGCTGAAGTCTAATTACTTGAATAACATGACCTTTTGTATTTAGTATTATGATTTACATACATCTATCTTCATTGGACAATCAACAAGGTTTTGAAACAGAGAGTAATGTGCTAATTGATCTATCCTACTAATGTTGTGTGTGTATTTATTGAATTGAAGGGTTGACATTGATCTTATGTTTGTTAATTTTTTCTGGGTACAAGAATAAATTTGATGCCGTCGTAGGAGATATTACCATTGTGGCCAGCCGAGCCAACCTCGTAGATTTCTCATTGCCATATACTGACTCGGGCGTGACAATGCTCGTCCCAATCAAACACAACATGCATCGTAGTATGTGGGTTTTCTTGAAACCTTTGAGCTTGGATCTGTGGCTTACAACCATAGCAGCCTCCATAGCAACAGGAATTGTTCTACTGATCTTAGAGCACAGTGGAAGAAGAGAATCGTTACAACCATTGGAGCTACTCTGTTTAATACTCTGGTTTCCTTTCTCCTCCTTGGTTCTTCCTGAAAGTAAGCTCAATTTCTTTCTTTATGCTAATTGTATTGAATTTTGGTATCGATCACATGGAAGAACTAGAAAACTGAAACCCCCACTTATCTTTTTGATTGAACAGGACAAATAGTGACCAATACACGCTCTAGGTTTGTGCTTGTGGTCTGGTTGTTTCTGGCGTTTGTCCTAATGCAGAGTTACACAGCGAGTTTGTCTTCAATCTTGATGTCAGATCAGCTACAGCCTAAGTATTTTAGCGTGAATGAACTTATATCCAAGGGATACTATGTTGGATATCAAGAGGGTTCCTTTACAAAATCTATGTTGATAGAGCAGTTGAAATTTAACGAATCCAAGCTGAAATCTTATGCAAACGTTGAAGACTATCGTAAAGCATTGTCTAAAGGAAGTCAAAACGGTGGTGTTGCTGCAATCTTTGATGAAATTCCTTATCTTAAGGTCTTCCTTACTAAATATGGCTCCGATTTCATCATGGCTGGACCTATATATCGTACAGACGGATTTGGGTTTGTAACTGTTTCTCTTAAGCAATAGTCAAAGTTTATTCAATGTGTATCAGATAAGAAGTTAGCTTGTTAATTTCAGGCATTTCCACTAAACTCCCGGTTAGTACCTTATGTATCAAGGGCAATATTGAACGTGACAGAGGGAGAGAAAATGGTGACAATTGAAACAAAATACTTTGGAGCTGGGAATCAAAATCAAGACAGCTCAAGCTCCTCCTCCGATGGTCCATGTCTAGAGGTGTCAAGCTTCGGGGGCCTTTTTATTATCACTGGGATAGCATTATTGCTGGCTTTGATCGGCTCAAAAACCTTCATCTGGCAAAAGCCTGCCTCAGTGGCAAAGACGTATTATAGGAAATATGTGTCGTTTCAGCATCATTCACATCCCGATGAGAAAGACAAGGAAATGGACGATATTTCGAAATTGTCAGAGGCTGTTTCAGCTTATGCAAATAATGGCTGCCACGATGAAAGTGTTGGTCCCGCAAAACATGTCACCGAGACCACTAGCTAA ATGGAGATGAATAAAGGTCCATTAGTATTTTGGTTGATTTGGGGTTTGTTGATTTGGGTTAGATTGAGTTATGGCAACAAAATTGAAGGGGAAGAGGAGGAAATTATGAATGGAAATTGGACGAGTACCAAAGTTAATTTGATACATGTAGGAGCTGTTGTTGATGAAGTGAGTCCATCAATTGGTGGGGCGGCACAAAAATGCATACAAATGGCACTGACCGATTTCTATGCATTTCATCCCAATTTTCATAATAAATTGGTTGTACATTTCAGAGACTCACAGGACGTGGTTGCCGCAACCTCCGCCGGGTTTATAAATGGTCGGGGAAGTGATGTAAAGGGGAAAACAGATATTGCGAATTTGGGGGTTTCGGAAGTGGGTCCAATGTTGTTGAAAGAGATGTTGAATATCAAATTTAAGGGTTTGAGTGGGGATTTCCATATGGTTAATGGGCATTTACAGCCATCGGCTTTTGAAATATTCAATGTGATTGGGAGAGCAGAGAGATTGATTGGGTGTTGGAGTCCTGAAGAAGGGATTTGTCAAAACATAGCGAATAAGAGACCTAATGAAAAATACTCCACTTCAGTTACCTCCATAGCAACAGGAATTGTTCTACTGATCTTAGAGCACAGTGGAAGAAGAGAATCGTTACAACCATTGGAGCTACTCTGTTTAATACTCTGGTTTCCTTTCTCCTCCTTGGTTCTTCCTGAAAAGGTGTCAAGCTTCGGGGGCCTTTTTATTATCACTGGGATAGCATTATTGCTGGCTTTGATCGGCTCAAAAACCTTCATCTGGCAAAAGCCTGCCTCAGTGGCAAAGACGTATTATAGGAAATATGTGTCGTTTCAGCATCATTCACATCCCGATGAGAAAGACAAGGAAATGGACGATATTTCGAAATTGTCAGAGGCTGTTTCAGCTTATGCAAATAATGGCTGCCACGATGAAAGTGTTGGTCCCGCAAAACATGTCACCGAGACCACTAGCTAA ATGGAGATGAATAAAGGTCCATTAGTATTTTGGTTGATTTGGGGTTTGTTGATTTGGGTTAGATTGAGTTATGGCAACAAAATTGAAGGGGAAGAGGAGGAAATTATGAATGGAAATTGGACGAGTACCAAAGTTAATTTGATACATGTAGGAGCTGTTGTTGATGAAGTGAGTCCATCAATTGGTGGGGCGGCACAAAAATGCATACAAATGGCACTGACCGATTTCTATGCATTTCATCCCAATTTTCATAATAAATTGGTTGTACATTTCAGAGACTCACAGGACGTGGTTGCCGCAACCTCCGCCGGGTTTATAAATGGTCGGGGAAGTGATGTAAAGGGGAAAACAGATATTGCGAATTTGGGGGTTTCGGAAGTGGGTCCAATGTTGTTGAAAGAGATGTTGAATATCAAATTTAAGGGTTTGAGTGGGGATTTCCATATGGTTAATGGGCATTTACAGCCATCGGCTTTTGAAATATTCAATGTGATTGGGAGAGCAGAGAGATTGATTGGGTGTTGGAGTCCTGAAGAAGGGATTTGTCAAAACATAGCGAATAAGAGACCTAATGAAAAATACTCCACTTCAGTTACCTCCATAGCAACAGGAATTGTTCTACTGATCTTAGAGCACAGTGGAAGAAGAGAATCGTTACAACCATTGGAGCTACTCTGTTTAATACTCTGGTTTCCTTTCTCCTCCTTGGTTCTTCCTGAAAAGGTGTCAAGCTTCGGGGGCCTTTTTATTATCACTGGGATAGCATTATTGCTGGCTTTGATCGGCTCAAAAACCTTCATCTGGCAAAAGCCTGCCTCAGTGGCAAAGACGTATTATAGGAAATATGTGTCGTTTCAGCATCATTCACATCCCGATGAGAAAGACAAGGAAATGGACGATATTTCGAAATTGTCAGAGGCTGTTTCAGCTTATGCAAATAATGGCTGCCACGATGAAAGTGTTGGTCCCGCAAAACATGTCACCGAGACCACTAGCTAA MEMNKGPLVFWLIWGLLIWVRLSYGNKIEGEEEEIMNGNWTSTKVNLIHVGAVVDEVSPSIGGAAQKCIQMALTDFYAFHPNFHNKLVVHFRDSQDVVAATSAGFINGRGSDVKGKTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQPSAFEIFNVIGRAERLIGCWSPEEGICQNIANKRPNEKYSTSVTSIATGIVLLILEHSGRRESLQPLELLCLILWFPFSSLVLPEKVSSFGGLFIITGIALLLALIGSKTFIWQKPASVAKTYYRKYVSFQHHSHPDEKDKEMDDISKLSEAVSAYANNGCHDESVGPAKHVTETTS Homology
BLAST of HG10008231 vs. NCBI nr
Match: XP_038880118.1 (glutamate receptor 2.2-like isoform X2 [Benincasa hispida]) HSP 1 Score: 287.0 bits (733), Expect = 2.1e-73 Identity = 263/897 (29.32%), Postives = 281/897 (31.33%), Query Frame = 0
BLAST of HG10008231 vs. NCBI nr
Match: XP_038880117.1 (glutamate receptor 2.2-like isoform X1 [Benincasa hispida]) HSP 1 Score: 286.6 bits (732), Expect = 2.8e-73 Identity = 263/898 (29.29%), Postives = 281/898 (31.29%), Query Frame = 0
BLAST of HG10008231 vs. NCBI nr
Match: XP_008453652.1 (PREDICTED: glutamate receptor 2.2-like [Cucumis melo]) HSP 1 Score: 278.9 bits (712), Expect = 5.8e-71 Identity = 274/937 (29.24%), Postives = 297/937 (31.70%), Query Frame = 0
BLAST of HG10008231 vs. NCBI nr
Match: XP_038880119.1 (glutamate receptor 2.2-like isoform X3 [Benincasa hispida]) HSP 1 Score: 264.2 bits (674), Expect = 1.5e-66 Identity = 201/585 (34.36%), Postives = 216/585 (36.92%), Query Frame = 0
BLAST of HG10008231 vs. NCBI nr
Match: XP_022928927.1 (glutamate receptor 2.2-like [Cucurbita moschata]) HSP 1 Score: 261.5 bits (667), Expect = 9.6e-66 Identity = 256/933 (27.44%), Postives = 289/933 (30.98%), Query Frame = 0
BLAST of HG10008231 vs. ExPASy Swiss-Prot
Match: Q8LGN0 (Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3) HSP 1 Score: 84.7 bits (208), Expect = 2.1e-15 Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of HG10008231 vs. ExPASy Swiss-Prot
Match: Q9SHV1 (Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.4e-14 Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of HG10008231 vs. ExPASy Swiss-Prot
Match: O04660 (Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2) HSP 1 Score: 80.5 bits (197), Expect = 4.0e-14 Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 0
BLAST of HG10008231 vs. ExPASy Swiss-Prot
Match: O81078 (Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.0e-13 Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of HG10008231 vs. ExPASy Swiss-Prot
Match: O81776 (Glutamate receptor 2.4 OS=Arabidopsis thaliana OX=3702 GN=GLR2.4 PE=2 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 9.8e-13 Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of HG10008231 vs. ExPASy TrEMBL
Match: A0A1S3BWV8 (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103494304 PE=3 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 2.8e-71 Identity = 274/937 (29.24%), Postives = 297/937 (31.70%), Query Frame = 0
BLAST of HG10008231 vs. ExPASy TrEMBL
Match: A0A6J1ELB3 (Glutamate receptor OS=Cucurbita moschata OX=3662 GN=LOC111435687 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 4.7e-66 Identity = 256/933 (27.44%), Postives = 289/933 (30.98%), Query Frame = 0
BLAST of HG10008231 vs. ExPASy TrEMBL
Match: A0A6J1C320 (Glutamate receptor OS=Momordica charantia OX=3673 GN=LOC111006985 PE=3 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64 Identity = 238/766 (31.07%), Postives = 268/766 (34.99%), Query Frame = 0
BLAST of HG10008231 vs. ExPASy TrEMBL
Match: A0A6J1I3V0 (Glutamate receptor OS=Cucurbita maxima OX=3661 GN=LOC111470323 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 9.7e-64 Identity = 251/926 (27.11%), Postives = 283/926 (30.56%), Query Frame = 0
BLAST of HG10008231 vs. ExPASy TrEMBL
Match: A0A5A7V8Q7 (Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold117G00030 PE=3 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61 Identity = 196/584 (33.56%), Postives = 212/584 (36.30%), Query Frame = 0
BLAST of HG10008231 vs. TAIR 10
Match: AT2G29120.1 (glutamate receptor 2.7 ) HSP 1 Score: 84.7 bits (208), Expect = 1.5e-16 Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of HG10008231 vs. TAIR 10
Match: AT2G24720.1 (glutamate receptor 2.2 ) HSP 1 Score: 82.0 bits (201), Expect = 9.7e-16 Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 0
BLAST of HG10008231 vs. TAIR 10
Match: AT5G27100.1 (glutamate receptor 2.1 ) HSP 1 Score: 80.5 bits (197), Expect = 2.8e-15 Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 0
BLAST of HG10008231 vs. TAIR 10
Match: AT2G29100.1 (glutamate receptor 2.9 ) HSP 1 Score: 78.2 bits (191), Expect = 1.4e-14 Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 0
HSP 2 Score: 45.1 bits (105), Expect = 1.3e-04 Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of HG10008231 vs. TAIR 10
Match: AT4G31710.1 (glutamate receptor 2.4 ) HSP 1 Score: 75.9 bits (185), Expect = 7.0e-14 Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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