HG10008231 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10008231
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGlutamate receptor
LocationChr10: 21082716 .. 21086957 (-)
RNA-Seq ExpressionHG10008231
SyntenyHG10008231
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGAATAAAGGTCCATTAGTATTTTGGTTGATTTGGGGTTTGTTGATTTGGGTTAGATTGAGTTATGGCAACAAAATTGAAGGGGAAGAGGAGGAAATTATGAATGGAAATTGGACGAGTACCAAAGTTAATTTGATACATGTAGGAGCTGTTGTTGATGAAGTGAGTCCATCAATTGGTGGGGCGGCACAAAAATGCATACAAATGGCACTGACCGATTTCTATGCATTTCATCCCAATTTTCATAATAAATTGGTTGTACATTTCAGAGACTCACAGGACGTGGTTGCCGCAACCTCCGCCGGTGAGTTCAAACTTCAAACAACCTCTCCTTTTTCCTTCTGTTCATTCTAATCCAATGTGCCTCCAAACCCACGGGACAAATCACATAGAAAGATTTTAAACCCTTTACTATATTCATGAGTATCCGAATACAACATTTAGTTGTCGAGAAAATCCATAAATTGAATCTATAGTCTCTTACCTCTTTATCATATTTATCACTAAAATCGGTAAATAACATGGGTGGATTTACTTGTAACTGAAAAACTATGTTAGAAAAAACTTAAAACAAAGTGTATCATTTAAAACACTCTTTTGAAAAGCAGTTTAAATGTAGTCTCAGATAAAATATCATAAATATTTTATTCTTAAAAAGACACGTTACTATAAAAAGAAATATAAAAAAAAAAAAAAAAAGTGCTATGCAAAACTATAAATTGAATAATTAACTTGGGATGTGGTCAAACATTAACAAATACATAACTTAAGAGCTAAGTAACAAACCAATGAAGAGAAAATTATCACTTAATCTTTTTGGGCAACTATAGTTAATGCAACTTTAGGTATAATTGTATCAATTTAAACAATTTTGAGATTATAACAATTTAAATTCGAATTAATAATTGTTTCAATTTAAATCTTTAAATTCGAAATTTTCATCATTGCATCAATTTAAACTCTTTGTTATGTTCTATTTGAATACACTTATGAATGTTAAAGATATAAATTAATATTTTTCATAATTTTTTTCAAAGGGATGTTTATTTTGTATTAGTTCAACTTTATAGTTCATTTAATAGATAAATGATGTTGATAATGATATTGTTATTGATAATATGCACATATGTTTTTGTAGTTGTGGATTTAGTGAAGAACGAAAAAGTGCATGCAATAATAGGGCCAGAGAGTTCAGGCGAGGCAACATTTATGATAAAGCTAGGCGAAAAATCTCGCGTCCCCATCATTTCATTTTCAGCCACAAGCCTCTCTATTTCTCCATCACAGAGCCCCTTCTTCGTTCGAACTGCCCAAAACGATTCTTCTCAAGTCAAAGCCATCACCACCATCGTCCAAGGATTTGGCTGGCACGAGCTCGTTCTCATCTATGAAGACACTGAATATGGCAAAGGCCTCATCCCTTTCCTCACCGATGCACTTCAAAAATCAAACATTCGAGTCCCTTTCAAATACGCCATTCCCACTTCCATGGATCCTTACGAAATCTCCAAACACCTCCATCAGATGAAGAACAGGCAAACCAGAGTTTTCTTGGTGCACGTCACTTCCCCATTTGGGTCTGCTCTGTTTCCACTGGTGGAAAAAGCTGGAATGATGACCGAAGGCTATGCTTGGCTTCTCACCAACGCTCTCTCCAATTGTCTTGACGCAATGAGTCCTCTGGTTATTAAATCAATGGAGGGTGTTTTGGGGATACGCCCGCATTTTCCTGCTTCAGAAGCGTTGGAGAATTTCAAGAGGAGATGGAAATGGTCGGCACCTGAGTTAAACATCTATGGTTTGTGGGCTTATGATACCATTTGGGCTTTGGCTATGGCGGCGGAGAGGATTGGGGAAGTGGAAAATCTAGGGTTTATAAATGGTCGGGGAAGTGATGTAAAGGGGAAAACAGATATTGCGAATTTGGGGGTTTCGGAAGTGGGTCCAATGTTGTTGAAAGAGATGTTGAATATCAAATTTAAGGGTTTGAGTGGGGATTTCCATATGGTTAATGGGCATTTACAGCCATCGGCTTTTGAAATATTCAATGTGATTGGGAGAGCAGAGAGATTGATTGGGTGTTGGAGTCCTGAAGAAGGGATTTGTCAAAACATAGCGAATAAGAGACCTAATGAAAAATACTCCACTTCAGTTAGTAAGCTGAAGAAGATAATATGGCCTGGAGACTCCATAACTGCACCAAAAGGATGGGCTGTGCCTGCTGATGGAGAAAAATTTAGAATAGGGGTTCCCAAAAAACAAGGATTCAATGAGTTCTTGGATGTTACTAGAAACCCTCAAACAGGGGAGCTCAATTATTCTGGGTTTTGCATAGATGTCTTCAGAGCTGTTGCTGATGCTTTGCCTTTTCCTCTTCCTTATGAATTTGAGCTCTTCAAAGATGAAGCTGGGGACAGCTCTGTTATTTATGATGACCTCCTCCACCAACTCACCGAGAGCAACAAGGTCAGTGCTCTCCAATTTTATTTTCATCAGAGTTATTGCTTTGTAGCCATGTCCACCAGTCAGTCCCACAATTTGCGTCCATAGCTTGCTTCTCTCAAAATTTTCAAAACTGGGGAGGATATATATTTACAGTTTCCCTTTTCTTTTTTTTTTTTTTTTTTTTCTTTTTTACATATCATGATCAAGATTCAATTCGATTTCTCAATATTCTGCTCACTTCTTATGAAGAAGCTGAAGTCTAATTACTTGAATAACATGACCTTTTGTATTTAGTATTATGATTTACATACATCTATCTTCATTGGACAATCAACAAGGTTTTGAAACAGAGAGTAATGTGCTAATTGATCTATCCTACTAATGTTGTGTGTGTATTTATTGAATTGAAGGGTTGACATTGATCTTATGTTTGTTAATTTTTTCTGGGTACAAGAATAAATTTGATGCCGTCGTAGGAGATATTACCATTGTGGCCAGCCGAGCCAACCTCGTAGATTTCTCATTGCCATATACTGACTCGGGCGTGACAATGCTCGTCCCAATCAAACACAACATGCATCGTAGTATGTGGGTTTTCTTGAAACCTTTGAGCTTGGATCTGTGGCTTACAACCATAGCAGCCTCCATAGCAACAGGAATTGTTCTACTGATCTTAGAGCACAGTGGAAGAAGAGAATCGTTACAACCATTGGAGCTACTCTGTTTAATACTCTGGTTTCCTTTCTCCTCCTTGGTTCTTCCTGAAAGTAAGCTCAATTTCTTTCTTTATGCTAATTGTATTGAATTTTGGTATCGATCACATGGAAGAACTAGAAAACTGAAACCCCCACTTATCTTTTTGATTGAACAGGACAAATAGTGACCAATACACGCTCTAGGTTTGTGCTTGTGGTCTGGTTGTTTCTGGCGTTTGTCCTAATGCAGAGTTACACAGCGAGTTTGTCTTCAATCTTGATGTCAGATCAGCTACAGCCTAAGTATTTTAGCGTGAATGAACTTATATCCAAGGGATACTATGTTGGATATCAAGAGGGTTCCTTTACAAAATCTATGTTGATAGAGCAGTTGAAATTTAACGAATCCAAGCTGAAATCTTATGCAAACGTTGAAGACTATCGTAAAGCATTGTCTAAAGGAAGTCAAAACGGTGGTGTTGCTGCAATCTTTGATGAAATTCCTTATCTTAAGGTCTTCCTTACTAAATATGGCTCCGATTTCATCATGGCTGGACCTATATATCGTACAGACGGATTTGGGTTTGTAACTGTTTCTCTTAAGCAATAGTCAAAGTTTATTCAATGTGTATCAGATAAGAAGTTAGCTTGTTAATTTCAGGCATTTCCACTAAACTCCCGGTTAGTACCTTATGTATCAAGGGCAATATTGAACGTGACAGAGGGAGAGAAAATGGTGACAATTGAAACAAAATACTTTGGAGCTGGGAATCAAAATCAAGACAGCTCAAGCTCCTCCTCCGATGGTCCATGTCTAGAGGTGTCAAGCTTCGGGGGCCTTTTTATTATCACTGGGATAGCATTATTGCTGGCTTTGATCGGCTCAAAAACCTTCATCTGGCAAAAGCCTGCCTCAGTGGCAAAGACGTATTATAGGAAATATGTGTCGTTTCAGCATCATTCACATCCCGATGAGAAAGACAAGGAAATGGACGATATTTCGAAATTGTCAGAGGCTGTTTCAGCTTATGCAAATAATGGCTGCCACGATGAAAGTGTTGGTCCCGCAAAACATGTCACCGAGACCACTAGCTAA

mRNA sequence

ATGGAGATGAATAAAGGTCCATTAGTATTTTGGTTGATTTGGGGTTTGTTGATTTGGGTTAGATTGAGTTATGGCAACAAAATTGAAGGGGAAGAGGAGGAAATTATGAATGGAAATTGGACGAGTACCAAAGTTAATTTGATACATGTAGGAGCTGTTGTTGATGAAGTGAGTCCATCAATTGGTGGGGCGGCACAAAAATGCATACAAATGGCACTGACCGATTTCTATGCATTTCATCCCAATTTTCATAATAAATTGGTTGTACATTTCAGAGACTCACAGGACGTGGTTGCCGCAACCTCCGCCGGGTTTATAAATGGTCGGGGAAGTGATGTAAAGGGGAAAACAGATATTGCGAATTTGGGGGTTTCGGAAGTGGGTCCAATGTTGTTGAAAGAGATGTTGAATATCAAATTTAAGGGTTTGAGTGGGGATTTCCATATGGTTAATGGGCATTTACAGCCATCGGCTTTTGAAATATTCAATGTGATTGGGAGAGCAGAGAGATTGATTGGGTGTTGGAGTCCTGAAGAAGGGATTTGTCAAAACATAGCGAATAAGAGACCTAATGAAAAATACTCCACTTCAGTTACCTCCATAGCAACAGGAATTGTTCTACTGATCTTAGAGCACAGTGGAAGAAGAGAATCGTTACAACCATTGGAGCTACTCTGTTTAATACTCTGGTTTCCTTTCTCCTCCTTGGTTCTTCCTGAAAAGGTGTCAAGCTTCGGGGGCCTTTTTATTATCACTGGGATAGCATTATTGCTGGCTTTGATCGGCTCAAAAACCTTCATCTGGCAAAAGCCTGCCTCAGTGGCAAAGACGTATTATAGGAAATATGTGTCGTTTCAGCATCATTCACATCCCGATGAGAAAGACAAGGAAATGGACGATATTTCGAAATTGTCAGAGGCTGTTTCAGCTTATGCAAATAATGGCTGCCACGATGAAAGTGTTGGTCCCGCAAAACATGTCACCGAGACCACTAGCTAA

Coding sequence (CDS)

ATGGAGATGAATAAAGGTCCATTAGTATTTTGGTTGATTTGGGGTTTGTTGATTTGGGTTAGATTGAGTTATGGCAACAAAATTGAAGGGGAAGAGGAGGAAATTATGAATGGAAATTGGACGAGTACCAAAGTTAATTTGATACATGTAGGAGCTGTTGTTGATGAAGTGAGTCCATCAATTGGTGGGGCGGCACAAAAATGCATACAAATGGCACTGACCGATTTCTATGCATTTCATCCCAATTTTCATAATAAATTGGTTGTACATTTCAGAGACTCACAGGACGTGGTTGCCGCAACCTCCGCCGGGTTTATAAATGGTCGGGGAAGTGATGTAAAGGGGAAAACAGATATTGCGAATTTGGGGGTTTCGGAAGTGGGTCCAATGTTGTTGAAAGAGATGTTGAATATCAAATTTAAGGGTTTGAGTGGGGATTTCCATATGGTTAATGGGCATTTACAGCCATCGGCTTTTGAAATATTCAATGTGATTGGGAGAGCAGAGAGATTGATTGGGTGTTGGAGTCCTGAAGAAGGGATTTGTCAAAACATAGCGAATAAGAGACCTAATGAAAAATACTCCACTTCAGTTACCTCCATAGCAACAGGAATTGTTCTACTGATCTTAGAGCACAGTGGAAGAAGAGAATCGTTACAACCATTGGAGCTACTCTGTTTAATACTCTGGTTTCCTTTCTCCTCCTTGGTTCTTCCTGAAAAGGTGTCAAGCTTCGGGGGCCTTTTTATTATCACTGGGATAGCATTATTGCTGGCTTTGATCGGCTCAAAAACCTTCATCTGGCAAAAGCCTGCCTCAGTGGCAAAGACGTATTATAGGAAATATGTGTCGTTTCAGCATCATTCACATCCCGATGAGAAAGACAAGGAAATGGACGATATTTCGAAATTGTCAGAGGCTGTTTCAGCTTATGCAAATAATGGCTGCCACGATGAAAGTGTTGGTCCCGCAAAACATGTCACCGAGACCACTAGCTAA

Protein sequence

MEMNKGPLVFWLIWGLLIWVRLSYGNKIEGEEEEIMNGNWTSTKVNLIHVGAVVDEVSPSIGGAAQKCIQMALTDFYAFHPNFHNKLVVHFRDSQDVVAATSAGFINGRGSDVKGKTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQPSAFEIFNVIGRAERLIGCWSPEEGICQNIANKRPNEKYSTSVTSIATGIVLLILEHSGRRESLQPLELLCLILWFPFSSLVLPEKVSSFGGLFIITGIALLLALIGSKTFIWQKPASVAKTYYRKYVSFQHHSHPDEKDKEMDDISKLSEAVSAYANNGCHDESVGPAKHVTETTS
Homology
BLAST of HG10008231 vs. NCBI nr
Match: XP_038880118.1 (glutamate receptor 2.2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 287.0 bits (733), Expect = 2.1e-73
Identity = 263/897 (29.32%), Postives = 281/897 (31.33%), Query Frame = 0

Query: 36  MNGNWT-STKVNLIHVGAVVDEVSPSIGGAAQKCIQMALTDFYAFHPNFHNKLVVHFRDS 95
           MNGN T STKVN+IHVGAVVDEVSPSIGGAAQKCI+MAL DFYAFHPN+ NKLVVHFRDS
Sbjct: 1   MNGNRTSSTKVNMIHVGAVVDEVSPSIGGAAQKCIKMALVDFYAFHPNYRNKLVVHFRDS 60

Query: 96  QDVVAATSA--------------------------------------------------- 155
           QDVVAATSA                                                   
Sbjct: 61  QDVVAATSAVVDLVKNEKVHAIIGPESSGEATFMIKLGEKARVPIISFSATSLSISPSQS 120

Query: 156 ------------------------------------------------------------ 215
                                                                       
Sbjct: 121 PFFVRTAQNDSSPVKAITTIVQGFGWHELVLIYEDTEYGKGLIPFLTDALQESNIRVPFK 180

Query: 216 ------------------------------------------------------------ 275
                                                                       
Sbjct: 181 YAIPTSMDPYEISKHLHKMKNRQTRVFLVHVTSPFGSALFPLVEKAGMMTEGYAWLLTNT 240

Query: 276 ------------------------------------------------------------ 333
                                                                       
Sbjct: 241 LSNCLDAMDPLVIKSMEGVLGIRPHFPASEALENFKRRWKWSAPELNIYGLWAYDTIWAL 300

BLAST of HG10008231 vs. NCBI nr
Match: XP_038880117.1 (glutamate receptor 2.2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 286.6 bits (732), Expect = 2.8e-73
Identity = 263/898 (29.29%), Postives = 281/898 (31.29%), Query Frame = 0

Query: 36  MNGNWT-STKVNLIHVGAVVDEVSPSIGGAAQKCIQMALTDFYAFHPNFHNKLVVHFRDS 95
           MNGN T STKVN+IHVGAVVDEVSPSIGGAAQKCI+MAL DFYAFHPN+ NKLVVHFRDS
Sbjct: 1   MNGNRTSSTKVNMIHVGAVVDEVSPSIGGAAQKCIKMALVDFYAFHPNYRNKLVVHFRDS 60

Query: 96  QDVVAATSA--------------------------------------------------- 155
           QDVVAATSA                                                   
Sbjct: 61  QDVVAATSAVVDLVKNEKVHAIIGPESSGEATFMIKLGEKARVPIISFSATSLSISPSQS 120

Query: 156 ------------------------------------------------------------ 215
                                                                       
Sbjct: 121 PFFVRTAQNDSSPVKAITTIVQGFGWHELVLIYEDTEYGKGLIPFLTDALQESNIRVPFK 180

Query: 216 ------------------------------------------------------------ 275
                                                                       
Sbjct: 181 YAIPTSMDPYEISKHLHKMKNRQTRVFLVHVTSPFGSALFPLVEKAGMMTEGYAWLLTNT 240

Query: 276 ------------------------------------------------------------ 333
                                                                       
Sbjct: 241 LSNCLDAMDPLVIKSMEGVLGIRPHFPASEALENFKRRWKWSAPELNIYGLWAYDTIWAL 300

BLAST of HG10008231 vs. NCBI nr
Match: XP_008453652.1 (PREDICTED: glutamate receptor 2.2-like [Cucumis melo])

HSP 1 Score: 278.9 bits (712), Expect = 5.8e-71
Identity = 274/937 (29.24%), Postives = 297/937 (31.70%), Query Frame = 0

Query: 1   MEMNKGPL---VFWLIWG-LLIWVRLSYGNKIEG---EEEEIMNGNWT--STKVNLIHVG 60
           MEM KG L   +FWL+ G LLIW     G +IEG   EE +  NGN T  S KVNLIHVG
Sbjct: 1   MEMRKGSLLSVLFWLMLGFLLIW-----GKQIEGHREEEVQFNNGNKTSRSRKVNLIHVG 60

Query: 61  AVVDEVSPSIGGAAQKCIQMALTDFYAFHPNFHNKLVVHFRDSQDVVAATSA-------- 120
           AVVDEVSPSIG AAQKCI+MALTDFYAFHPN++NKLV+HFRDS D+VAATSA        
Sbjct: 61  AVVDEVSPSIGVAAQKCIKMALTDFYAFHPNYNNKLVLHFRDSHDMVAATSAAVDLVKNE 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 KVHAIIGPESSGEATFMIKLGDKARVPIISFSATSLSISPSHSPFFVRTAQNDSSQVKAI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 TTLVQGFGWHDLVLIYEDTEYGRGLIPFLTDALQESNIRVSFKYAIPASMDPYEISKHLH 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 NMKKRQTRVFLVHVTSPFGSALFPLVEKAGMMTEGYAWLLTNTLSNCLDAMDPLVIKSME 300

Query: 301 --------------------------------------------------------GFIN 330
                                                                   GF+ 
Sbjct: 301 GVLGIRPHFPASEDLENFKRRWKWSAPELNIYGLWAYDTIWALAMAAERIGDVSNLGFLK 360

BLAST of HG10008231 vs. NCBI nr
Match: XP_038880119.1 (glutamate receptor 2.2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 264.2 bits (674), Expect = 1.5e-66
Identity = 201/585 (34.36%), Postives = 216/585 (36.92%), Query Frame = 0

Query: 104 GFINGRGSDVKGKTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQPSAFEIFN 163
           GF+ GRGSDV+GKTDIANLGVSEVGP+LLKEMLNIKFKGLSGDFH+VNGHLQPSAFEIFN
Sbjct: 248 GFLKGRGSDVEGKTDIANLGVSEVGPLLLKEMLNIKFKGLSGDFHLVNGHLQPSAFEIFN 307

Query: 164 VIGRAERLIGCWSPEEGICQNIANKRPNEKYSTSVT------------------------ 223
           VIGR ERLIGCWSPEEGICQN ANK+PNEKYSTSV+                        
Sbjct: 308 VIGRGERLIGCWSPEEGICQNRANKKPNEKYSTSVSKLKKIIWPGDSITAPKGWAVPADG 367

Query: 224 ------------------------------------------------------------ 283
                                                                       
Sbjct: 368 EKFRIGVRKKHGFNEFLDVTRNPQTGELNYTGFCIDVFRAVADALPFPLPYEFELFKDDA 427

Query: 284 ------------------------------------------------------------ 333
                                                                       
Sbjct: 428 GDSSVIYDDLLHQLAESKKKNKFDAVVGDITIVASRANLVDFSLPYTDSGVTMLVPIKHN 487

BLAST of HG10008231 vs. NCBI nr
Match: XP_022928927.1 (glutamate receptor 2.2-like [Cucurbita moschata])

HSP 1 Score: 261.5 bits (667), Expect = 9.6e-66
Identity = 256/933 (27.44%), Postives = 289/933 (30.98%), Query Frame = 0

Query: 3   MNKGPLVFWLIWGLLIWVRLSYGNKIEGEEEEIMNGNWTSTKVNLIHVGAVVDEVSPSIG 62
           M+K    FWLIWGLLIWV LS G KI+G EEE+MN N   T VNLIHVGAVVD+++PSIG
Sbjct: 6   MSKLKAPFWLIWGLLIWVGLSCGAKIDG-EEEVMNEN--RTTVNLIHVGAVVDKLTPSIG 65

Query: 63  GAAQKCIQMALTDFYAFHPNFHNKLVVHFRDSQDVVAATSA------------------- 122
           GAA+KCIQMALTDFYA HP++ N+LV+  RDSQDVVAATSA                   
Sbjct: 66  GAAEKCIQMALTDFYAAHPHYRNRLVMKIRDSQDVVAATSAVVDLVKNQKVHAIIGPESS 125

Query: 123 ------------------------------------------------------------ 182
                                                                       
Sbjct: 126 SEATFMIKLGEKVRVPIISFSATSLSISPSQSPFFVRTAQNDSSQVKAITAIVQGFGWHE 185

Query: 183 ------------------------------------------------------------ 242
                                                                       
Sbjct: 186 LVLIYEDTEYGKGLIPFLTDELQQSNIRVPYKYAIATSMDAYQISEQLNKMKNRQTRVFL 245

Query: 243 ------------------------------------------------------------ 302
                                                                       
Sbjct: 246 VHVTSPFGSVLFPLVDKAGMMSEGYAWILTNSLSNCLDAMDPLVIKSMEGVLGIRPYFPA 305

Query: 303 ---------------------------------------------GFINGRGSDVKGKTD 333
                                                         F+ G+GSDV+GKTD
Sbjct: 306 SEALESFKRRWKWSTPELNIYGLWAYDTIWALATAAERIGEGNNLRFLRGQGSDVEGKTD 365

BLAST of HG10008231 vs. ExPASy Swiss-Prot
Match: Q8LGN0 (Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3)

HSP 1 Score: 84.7 bits (208), Expect = 2.1e-15
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0

Query: 116 KTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQPSAFEIFNVIGRAERLIGCW 175
           KT++  LGVS  GP LLK + N++F GL+G+F ++NG L+ S F++ N+IG  ER+IG W
Sbjct: 356 KTNLGTLGVSRYGPSLLKALSNVRFNGLAGEFELINGQLESSVFDVINIIGSEERIIGLW 415

Query: 176 SPEEGICQNIANKRPNEKYSTSVTSIATGIVL 208
            P  GI           K +TSV     G V+
Sbjct: 416 RPSNGIV------NAKSKNTTSVLGERLGPVI 441

BLAST of HG10008231 vs. ExPASy Swiss-Prot
Match: Q9SHV1 (Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-14
Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 98  VAATSAGFINGRGSDV---KGKTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHL 157
           +A   AG  N   S+V   K  +++  LG+S+ GP LL+ +  ++FKGL+GDFH V+G L
Sbjct: 322 MAIEDAGINNMTFSNVDTGKNVSELDGLGLSQFGPKLLQTVSTVQFKGLAGDFHFVSGQL 381

Query: 158 QPSAFEIFNVIGRAERLIGCWSPEEGICQNI 186
           QPS FEI N+IG  ER IG W+   G+ + +
Sbjct: 382 QPSVFEIVNMIGTGERSIGFWTEGNGLVKKL 412

BLAST of HG10008231 vs. ExPASy Swiss-Prot
Match: O04660 (Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 4.0e-14
Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 0

Query: 117 TDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQPSAFEIFNVIGRAERLIGCWS 176
           +++  LGVS+ GP LL+ +  ++F+GL+GDF  +NG LQPS FEI NV G+  R IG W 
Sbjct: 344 SELQGLGVSQYGPKLLQTLSRVRFQGLAGDFQFINGELQPSVFEIVNVNGQGGRTIGFWM 403

Query: 177 PEEGICQNIANK 189
            E G+ +N+  K
Sbjct: 404 KEYGLFKNVDQK 415

BLAST of HG10008231 vs. ExPASy Swiss-Prot
Match: O81078 (Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.0e-13
Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 0

Query: 114 KGKTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQPSAFEIFNVIGRAERLIG 173
           K +TD+ N+GVS  GP L K    ++F GL+G+F +++G LQ   FEI N +G  ER+IG
Sbjct: 344 KNRTDLGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLIDGQLQSPKFEIINFVGNEERIIG 403

Query: 174 CWSPEEGI 182
            W+P +G+
Sbjct: 404 FWTPRDGL 411

BLAST of HG10008231 vs. ExPASy Swiss-Prot
Match: O81776 (Glutamate receptor 2.4 OS=Arabidopsis thaliana OX=3702 GN=GLR2.4 PE=2 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 9.8e-13
Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 0

Query: 98  VAATSAGFINGRGSDVKGK--TDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQ 157
           +A   AG  N   S + G+  +D+  L VSE GP L++ +  I+FKGLSGD+H V+G L 
Sbjct: 322 MAVEEAGTTNLTFSKMDGRNISDLEALSVSEYGPKLIRSLSQIQFKGLSGDYHFVDGQLH 381

Query: 158 PSAFEIFNVIGRAERLIGCWSPEEGICQNIA 187
            S FEI NVI     L+G W+ ++G+ ++++
Sbjct: 382 ASVFEIVNVIDGGGILVGFWTQDKGLVKDLS 412

BLAST of HG10008231 vs. ExPASy TrEMBL
Match: A0A1S3BWV8 (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103494304 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 2.8e-71
Identity = 274/937 (29.24%), Postives = 297/937 (31.70%), Query Frame = 0

Query: 1   MEMNKGPL---VFWLIWG-LLIWVRLSYGNKIEG---EEEEIMNGNWT--STKVNLIHVG 60
           MEM KG L   +FWL+ G LLIW     G +IEG   EE +  NGN T  S KVNLIHVG
Sbjct: 1   MEMRKGSLLSVLFWLMLGFLLIW-----GKQIEGHREEEVQFNNGNKTSRSRKVNLIHVG 60

Query: 61  AVVDEVSPSIGGAAQKCIQMALTDFYAFHPNFHNKLVVHFRDSQDVVAATSA-------- 120
           AVVDEVSPSIG AAQKCI+MALTDFYAFHPN++NKLV+HFRDS D+VAATSA        
Sbjct: 61  AVVDEVSPSIGVAAQKCIKMALTDFYAFHPNYNNKLVLHFRDSHDMVAATSAAVDLVKNE 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 KVHAIIGPESSGEATFMIKLGDKARVPIISFSATSLSISPSHSPFFVRTAQNDSSQVKAI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 TTLVQGFGWHDLVLIYEDTEYGRGLIPFLTDALQESNIRVSFKYAIPASMDPYEISKHLH 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 NMKKRQTRVFLVHVTSPFGSALFPLVEKAGMMTEGYAWLLTNTLSNCLDAMDPLVIKSME 300

Query: 301 --------------------------------------------------------GFIN 330
                                                                   GF+ 
Sbjct: 301 GVLGIRPHFPASEDLENFKRRWKWSAPELNIYGLWAYDTIWALAMAAERIGDVSNLGFLK 360

BLAST of HG10008231 vs. ExPASy TrEMBL
Match: A0A6J1ELB3 (Glutamate receptor OS=Cucurbita moschata OX=3662 GN=LOC111435687 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 4.7e-66
Identity = 256/933 (27.44%), Postives = 289/933 (30.98%), Query Frame = 0

Query: 3   MNKGPLVFWLIWGLLIWVRLSYGNKIEGEEEEIMNGNWTSTKVNLIHVGAVVDEVSPSIG 62
           M+K    FWLIWGLLIWV LS G KI+G EEE+MN N   T VNLIHVGAVVD+++PSIG
Sbjct: 6   MSKLKAPFWLIWGLLIWVGLSCGAKIDG-EEEVMNEN--RTTVNLIHVGAVVDKLTPSIG 65

Query: 63  GAAQKCIQMALTDFYAFHPNFHNKLVVHFRDSQDVVAATSA------------------- 122
           GAA+KCIQMALTDFYA HP++ N+LV+  RDSQDVVAATSA                   
Sbjct: 66  GAAEKCIQMALTDFYAAHPHYRNRLVMKIRDSQDVVAATSAVVDLVKNQKVHAIIGPESS 125

Query: 123 ------------------------------------------------------------ 182
                                                                       
Sbjct: 126 SEATFMIKLGEKVRVPIISFSATSLSISPSQSPFFVRTAQNDSSQVKAITAIVQGFGWHE 185

Query: 183 ------------------------------------------------------------ 242
                                                                       
Sbjct: 186 LVLIYEDTEYGKGLIPFLTDELQQSNIRVPYKYAIATSMDAYQISEQLNKMKNRQTRVFL 245

Query: 243 ------------------------------------------------------------ 302
                                                                       
Sbjct: 246 VHVTSPFGSVLFPLVDKAGMMSEGYAWILTNSLSNCLDAMDPLVIKSMEGVLGIRPYFPA 305

Query: 303 ---------------------------------------------GFINGRGSDVKGKTD 333
                                                         F+ G+GSDV+GKTD
Sbjct: 306 SEALESFKRRWKWSTPELNIYGLWAYDTIWALATAAERIGEGNNLRFLRGQGSDVEGKTD 365

BLAST of HG10008231 vs. ExPASy TrEMBL
Match: A0A6J1C320 (Glutamate receptor OS=Momordica charantia OX=3673 GN=LOC111006985 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 238/766 (31.07%), Postives = 268/766 (34.99%), Query Frame = 0

Query: 12  LIWGLLIWVRLSYGNKIEGEEEEIMNGNWTSTKVNLIHVGAVVDEVSPSIGGAAQKCIQM 71
           LIW  LI   LS  +K + + E IM+GN T +KVNLIHVGAVVDE++PSIGGAAQKCI M
Sbjct: 89  LIW--LILFGLSCASKKDTQNEGIMDGNRTRSKVNLIHVGAVVDELTPSIGGAAQKCITM 148

Query: 72  ALTDFYAFHPNFHNKLVVHFRDSQDVVAATSA---------------------------- 131
           AL DFYA HPN  N LVVHFRDSQDVV ATSA                            
Sbjct: 149 ALADFYAAHPNNRNNLVVHFRDSQDVVDATSAVVDLVKNEEVHAIIGPESSSEATFMIKL 208

Query: 132 -------------------------------------------------GFINGR-GSDV 191
                                                            GF+  R G+D 
Sbjct: 209 GEKASVPIVSFSATSLSISPSQSPFFIRTYDTIWALALAAERIGEVTHLGFLKPRDGND- 268

Query: 192 KGKTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQPSAFEIFNVIGRAERLIG 251
             KTDI NLGVSEVGP LL+E+ N++F+GLSGDFH+V+GHLQPSAFEIFNVIGRAERLIG
Sbjct: 269 -AKTDIDNLGVSEVGPKLLREISNVRFQGLSGDFHLVDGHLQPSAFEIFNVIGRAERLIG 328

Query: 252 CWSPEEGICQNIA----NKRPNEKYSTSVT------------------------------ 311
           CW+PE+GIC+NIA    NK    KYS+SV+                              
Sbjct: 329 CWTPEKGICRNIADDIDNKPSGHKYSSSVSKLKKIIWPGDSITAPKGWAVPADGEKFRIG 388

Query: 312 ------------------------------------------------------------ 329
                                                                       
Sbjct: 389 VPRKQGFNEFLDVTRNPDTGELNFTGFCIDVFRAVADALPFHLPYEFELFRDEAGDSSVI 448

BLAST of HG10008231 vs. ExPASy TrEMBL
Match: A0A6J1I3V0 (Glutamate receptor OS=Cucurbita maxima OX=3661 GN=LOC111470323 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 9.7e-64
Identity = 251/926 (27.11%), Postives = 283/926 (30.56%), Query Frame = 0

Query: 10  FWLIWGLLIWVRLSYGNKIEGEEEEIMNGNWTSTKVNLIHVGAVVDEVSPSIGGAAQKCI 69
           FWLIWGLLIWV LS   KI+  EEE+MN N   T VNLIHVGAVVD+++PSIGGAA+KCI
Sbjct: 13  FWLIWGLLIWVGLSCAAKID-VEEEVMNEN--RTAVNLIHVGAVVDKLTPSIGGAAEKCI 72

Query: 70  QMALTDFYAFHPNFHNKLVVHFRDSQDVVAATSA-------------------------- 129
           QMALTDFYA HP + N+L++H RDSQDVVAATSA                          
Sbjct: 73  QMALTDFYAAHPYYRNRLIMHIRDSQDVVAATSAVVDLVKNQKVHAIIGPESSSEATFMI 132

Query: 130 ------------------------------------------------------------ 189
                                                                       
Sbjct: 133 KLGEQIRVPIISFSATSLSISPSHSPFFVRTAQNDSSQVKAITTIVQGFGWHELVLIYED 192

Query: 190 ------------------------------------------------------------ 249
                                                                       
Sbjct: 193 TEYGKGLIPFLTDELQQSNIRVPYKYAIATSMDAYQISEQLNKMKNRQTRVFLVHVTSPF 252

Query: 250 ------------------------------------------------------------ 309
                                                                       
Sbjct: 253 GSVLFPLVDKAGMMSEGYAWILTNSLSNCLDAMDPLVIKSMEGVLGIRPYFPASEALESF 312

Query: 310 --------------------------------------GFINGRGSDVKGKTDIANLGVS 333
                                                  F+ G+GSDV+GKTDIANLGVS
Sbjct: 313 KRRWKWSKPELNIYGLWAYDTIWALATAAERIGEGNNLRFLRGQGSDVEGKTDIANLGVS 372

BLAST of HG10008231 vs. ExPASy TrEMBL
Match: A0A5A7V8Q7 (Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold117G00030 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 3.4e-61
Identity = 196/584 (33.56%), Postives = 212/584 (36.30%), Query Frame = 0

Query: 101 TSAGFINGRGSDVKGKTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQPSAFE 160
           ++ GF+ GR SDV+GKTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFH+VNGHLQPSAFE
Sbjct: 245 SNLGFLKGRVSDVEGKTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHLVNGHLQPSAFE 304

Query: 161 IFNVIGRAERLIGCWSPEEGICQNIANKRPNEKYSTSVT--------------------- 220
           IFNVIG AERLIGCW+PEEGICQNIANK+PNEKYSTSV+                     
Sbjct: 305 IFNVIGTAERLIGCWNPEEGICQNIANKKPNEKYSTSVSKLKKIIWPGDSITAPKGWAVP 364

Query: 221 ------------------------------------------------------------ 280
                                                                       
Sbjct: 365 ADGEKFRIGVPKKQGFNEFLDVTRNPQNGELNFTGFCIDVFRAVADALPFPLPYEFELFE 424

Query: 281 ------------------------------------------------------------ 330
                                                                       
Sbjct: 425 DDAGDNSVIYDDLLHQLAEREKNKFDAVVGDITIVASRANLVDFSLPYTDSGVTMLVPIK 484

BLAST of HG10008231 vs. TAIR 10
Match: AT2G29120.1 (glutamate receptor 2.7 )

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-16
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0

Query: 116 KTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQPSAFEIFNVIGRAERLIGCW 175
           KT++  LGVS  GP LLK + N++F GL+G+F ++NG L+ S F++ N+IG  ER+IG W
Sbjct: 356 KTNLGTLGVSRYGPSLLKALSNVRFNGLAGEFELINGQLESSVFDVINIIGSEERIIGLW 415

Query: 176 SPEEGICQNIANKRPNEKYSTSVTSIATGIVL 208
            P  GI           K +TSV     G V+
Sbjct: 416 RPSNGIV------NAKSKNTTSVLGERLGPVI 441

BLAST of HG10008231 vs. TAIR 10
Match: AT2G24720.1 (glutamate receptor 2.2 )

HSP 1 Score: 82.0 bits (201), Expect = 9.7e-16
Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 98  VAATSAGFINGRGSDV---KGKTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHL 157
           +A   AG  N   S+V   K  +++  LG+S+ GP LL+ +  ++FKGL+GDFH V+G L
Sbjct: 322 MAIEDAGINNMTFSNVDTGKNVSELDGLGLSQFGPKLLQTVSTVQFKGLAGDFHFVSGQL 381

Query: 158 QPSAFEIFNVIGRAERLIGCWSPEEGICQNI 186
           QPS FEI N+IG  ER IG W+   G+ + +
Sbjct: 382 QPSVFEIVNMIGTGERSIGFWTEGNGLVKKL 412

BLAST of HG10008231 vs. TAIR 10
Match: AT5G27100.1 (glutamate receptor 2.1 )

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-15
Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 0

Query: 117 TDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQPSAFEIFNVIGRAERLIGCWS 176
           +++  LGVS+ GP LL+ +  ++F+GL+GDF  +NG LQPS FEI NV G+  R IG W 
Sbjct: 344 SELQGLGVSQYGPKLLQTLSRVRFQGLAGDFQFINGELQPSVFEIVNVNGQGGRTIGFWM 403

Query: 177 PEEGICQNIANK 189
            E G+ +N+  K
Sbjct: 404 KEYGLFKNVDQK 415

BLAST of HG10008231 vs. TAIR 10
Match: AT2G29100.1 (glutamate receptor 2.9 )

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-14
Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 0

Query: 114 KGKTDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQPSAFEIFNVIGRAERLIG 173
           K +TD+ N+GVS  GP L K    ++F GL+G+F +++G LQ   FEI N +G  ER+IG
Sbjct: 344 KNRTDLGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLIDGQLQSPKFEIINFVGNEERIIG 403

Query: 174 CWSPEEGI 182
            W+P +G+
Sbjct: 404 FWTPRDGL 411


HSP 2 Score: 45.1 bits (105), Expect = 1.3e-04
Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 0

Query: 48  IHVGAVVDEVSPSIGGAAQKCIQMALTDFYAFHPNFHNKLVVHFRDS-QDVVAATSA 104
           I VG V+D ++ +        I+MA++DFYA HPN+  +L +H RDS +D V A++A
Sbjct: 30  IKVGVVLD-LNTTFSKICLTSIKMAVSDFYADHPNYLTRLTLHVRDSMEDTVQASAA 85

BLAST of HG10008231 vs. TAIR 10
Match: AT4G31710.1 (glutamate receptor 2.4 )

HSP 1 Score: 75.9 bits (185), Expect = 7.0e-14
Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 0

Query: 98  VAATSAGFINGRGSDVKGK--TDIANLGVSEVGPMLLKEMLNIKFKGLSGDFHMVNGHLQ 157
           +A   AG  N   S + G+  +D+  L VSE GP L++ +  I+FKGLSGD+H V+G L 
Sbjct: 345 MAVEEAGTTNLTFSKMDGRNISDLEALSVSEYGPKLIRSLSQIQFKGLSGDYHFVDGQLH 404

Query: 158 PSAFEIFNVIGRAERLIGCWSPEEGICQNIA 187
            S FEI NVI     L+G W+ ++G+ ++++
Sbjct: 405 ASVFEIVNVIDGGGILVGFWTQDKGLVKDLS 435

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880118.12.1e-7329.32glutamate receptor 2.2-like isoform X2 [Benincasa hispida][more]
XP_038880117.12.8e-7329.29glutamate receptor 2.2-like isoform X1 [Benincasa hispida][more]
XP_008453652.15.8e-7129.24PREDICTED: glutamate receptor 2.2-like [Cucumis melo][more]
XP_038880119.11.5e-6634.36glutamate receptor 2.2-like isoform X3 [Benincasa hispida][more]
XP_022928927.19.6e-6627.44glutamate receptor 2.2-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q8LGN02.1e-1542.39Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3[more]
Q9SHV11.4e-1443.96Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1[more]
O046604.0e-1447.22Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2[more]
O810782.0e-1345.59Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1[more]
O817769.8e-1340.66Glutamate receptor 2.4 OS=Arabidopsis thaliana OX=3702 GN=GLR2.4 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A1S3BWV82.8e-7129.24Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103494304 PE=3 SV=1[more]
A0A6J1ELB34.7e-6627.44Glutamate receptor OS=Cucurbita moschata OX=3662 GN=LOC111435687 PE=3 SV=1[more]
A0A6J1C3201.1e-6431.07Glutamate receptor OS=Momordica charantia OX=3673 GN=LOC111006985 PE=3 SV=1[more]
A0A6J1I3V09.7e-6427.11Glutamate receptor OS=Cucurbita maxima OX=3661 GN=LOC111470323 PE=3 SV=1[more]
A0A5A7V8Q73.4e-6133.56Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold117G0... [more]
Match NameE-valueIdentityDescription
AT2G29120.11.5e-1642.39glutamate receptor 2.7 [more]
AT2G24720.19.7e-1643.96glutamate receptor 2.2 [more]
AT5G27100.12.8e-1547.22glutamate receptor 2.1 [more]
AT2G29100.11.4e-1445.59glutamate receptor 2.9 [more]
AT4G31710.17.0e-1440.66glutamate receptor 2.4 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34836OS06G0188250 PROTEINcoord: 22..105
coord: 114..202
NoneNo IPR availablePANTHERPTHR34836:SF1OS06G0188250 PROTEINcoord: 22..105
NoneNo IPR availablePANTHERPTHR34836:SF1OS06G0188250 PROTEINcoord: 114..202
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 126..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10008231.1HG10008231.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034220 ion transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0015276 ligand-gated ion channel activity
molecular_function GO:0038023 signaling receptor activity