Homology
BLAST of HG10008213 vs. NCBI nr
Match:
XP_038880029.1 (pentatricopeptide repeat-containing protein At2g37230 [Benincasa hispida])
HSP 1 Score: 1404.8 bits (3635), Expect = 0.0e+00
Identity = 711/760 (93.55%), Postives = 728/760 (95.79%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSLHFFSSTQEPISTATQNESPNDPSVSSDAA 60
MAHISVSKLH +H++VLSSSSI K TAL SLHFFSSTQEPISTATQNESPN PS SSDAA
Sbjct: 1 MAHISVSKLHSSHYRVLSSSSIPKPTALYSLHFFSSTQEPISTATQNESPNGPSASSDAA 60
Query: 61 VPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD 120
VPQ ESVA NG EQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD
Sbjct: 61 VPQPAESVAVNGAEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD 120
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
HSLVWNVLHAAK SDHALNF+RWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM
Sbjct: 121 HSLVWNVLHAAKNSDHALNFFRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
NKG+EWDEDLFV+LI+SYGKAGIVQE+VK FQKMKELGVERSVKSYDALFKVILRRGRY
Sbjct: 181 LNKGIEWDEDLFVILIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKVILRRGRY 240
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
MMAKRYFNAMLNEGIEPT HTYNVMLWG FLSLRLETAKRFYEDMK+RGI PDVVTYNTM
Sbjct: 241 MMAKRYFNAMLNEGIEPTRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTM 300
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
INGYYRFKMMEE EQFFTEMKGKNIVPTVISYTTMIKGYVS GRVDDGLRLFEEMKA GV
Sbjct: 301 INGYYRFKMMEEAEQFFTEMKGKNIVPTVISYTTMIKGYVSAGRVDDGLRLFEEMKAVGV 360
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
KPNDITYSTLLPGLCDAEKMSEARQILTEMVD YIAPKDNSIFMRLLSCQC HGDLDAAM
Sbjct: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDKYIAPKDNSIFMRLLSCQCMHGDLDAAM 420
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
HVLKAMIRLSIPTEAGHYGILIENCCKA MYDKAVKLLDKLVEKEIILRPQSTLEMEASA
Sbjct: 421 HVLKAMIRLSIPTEAGHYGILIENCCKAGMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGR 540
YNLIIQYLCNHGQTGKA+TFFRQLLKKGI+DE AFNNLIRGHSKEGNPELAFE+LKIMGR
Sbjct: 481 YNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGHSKEGNPELAFEILKIMGR 540
Query: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQT 600
R VSRDAESYKLLIKSYLSKGEPADAKTALD+MIESGH+PDSALFRSVMESLF DGRVQT
Sbjct: 541 RDVSRDAESYKLLIKSYLSKGEPADAKTALDSMIESGHYPDSALFRSVMESLFTDGRVQT 600
Query: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC 660
ASRVMNSMLDKGITENLDLVAKILEAL MRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC
Sbjct: 601 ASRVMNSMLDKGITENLDLVAKILEALLMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC 660
Query: 661 ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWS 720
ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAY+ILCKIMEKGGA DW
Sbjct: 661 ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYAILCKIMEKGGANDWG 720
Query: 721 SCDDLIKSLNQEGNTKQADILSRMVKGGDKKRSKKASLAA 761
S DDLIKSLNQEGNTKQADILSR +KGGD+KR KK SLAA
Sbjct: 721 SFDDLIKSLNQEGNTKQADILSRKMKGGDRKRCKKPSLAA 760
BLAST of HG10008213 vs. NCBI nr
Match:
KAA0035127.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ95953.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1370.9 bits (3547), Expect = 0.0e+00
Identity = 690/760 (90.79%), Postives = 725/760 (95.39%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSLHFFSSTQEPISTATQNESPNDPSVSSDAA 60
MAHISVSKLH TH++VLSSSSISK TALNSLHFFSSTQEPIS ATQNESPNDP SS+AA
Sbjct: 1 MAHISVSKLHFTHYRVLSSSSISKPTALNSLHFFSSTQEPISPATQNESPNDPPASSNAA 60
Query: 61 VPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD 120
+PQ ES A NGV+QVK R PRG+PRN EKLED+IC+MMA+REWTTRLQNSIRSLVPQFD
Sbjct: 61 LPQTAESAAVNGVQQVKGRIPRGRPRNTEKLEDLICRMMASREWTTRLQNSIRSLVPQFD 120
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
H LV+NVLHAAKKS+HALNF+RWVERAGLFQHDRETHLKIIEILG ASKLNHARCILLDM
Sbjct: 121 HCLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHLKIIEILGGASKLNHARCILLDM 180
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
PNKGVEWDEDLFVVLIDSYGKAGIVQE+VK F+KMKELGVERS KSYDALFKVILRRGRY
Sbjct: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQEAVKIFRKMKELGVERSNKSYDALFKVILRRGRY 240
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
MMAKRYFNAMLNEG+EPT HTYNVMLWG FLSLRLETAKRFYEDMK+RGI PDVVTYNTM
Sbjct: 241 MMAKRYFNAMLNEGLEPTRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTM 300
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
INGY RFKMMEE EQFFTEMKGKNI PTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAG
Sbjct: 301 INGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGE 360
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
KPNDITYSTLLPGLCDAEK+ EAR+ILTEMV YIAPKDNSIFMRLLSCQCKHGDLDAAM
Sbjct: 361 KPNDITYSTLLPGLCDAEKLPEARKILTEMVARYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
HVLKAM+RLSIPTEAGHYGILIENCCKA MYDKAVKLLD+LVEKEIIL+PQSTLEMEASA
Sbjct: 421 HVLKAMLRLSIPTEAGHYGILIENCCKAGMYDKAVKLLDQLVEKEIILKPQSTLEMEASA 480
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGR 540
YNLIIQYLCNHGQTGKAE FFRQLLKKGI+DE AFNNLIRGH+KEGNPE AFEMLKIMGR
Sbjct: 481 YNLIIQYLCNHGQTGKAEIFFRQLLKKGIQDEVAFNNLIRGHAKEGNPEFAFEMLKIMGR 540
Query: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQT 600
RGVSRDAESYKLLIKSYLSKGEPADAKTALD+MIE+GH PDSALFRSVMESLF DGRVQT
Sbjct: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQT 600
Query: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC 660
ASRVMNSMLDKGITENLDLVAKILEALFMRGH EE LGRI+LLM+CNCPPDFDSLLSVLC
Sbjct: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEGLGRINLLMNCNCPPDFDSLLSVLC 660
Query: 661 ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWS 720
E+GKTIAA KLL+FGLERECNI+FSSYEKVLDAL+GAGKTLNAY+ILCKIMEKGGAKDWS
Sbjct: 661 EKGKTIAAFKLLNFGLERECNIQFSSYEKVLDALMGAGKTLNAYAILCKIMEKGGAKDWS 720
Query: 721 SCDDLIKSLNQEGNTKQADILSRMVKGGDKKRSKKASLAA 761
SCDDLIK+LNQEGNTKQADILSRMVKGGD+KRSKK+SLAA
Sbjct: 721 SCDDLIKTLNQEGNTKQADILSRMVKGGDRKRSKKSSLAA 760
BLAST of HG10008213 vs. NCBI nr
Match:
XP_004149878.1 (pentatricopeptide repeat-containing protein At2g37230 isoform X1 [Cucumis sativus] >KGN65270.1 hypothetical protein Csa_019697 [Cucumis sativus])
HSP 1 Score: 1369.0 bits (3542), Expect = 0.0e+00
Identity = 688/760 (90.53%), Postives = 723/760 (95.13%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSLHFFSSTQEPISTATQNESPNDPSVSSDAA 60
MAHISVSKLH TH++VLSSSSISK TALNSLHFFSSTQEPISTATQN SPNDPS SSDAA
Sbjct: 1 MAHISVSKLHFTHYRVLSSSSISKPTALNSLHFFSSTQEPISTATQNGSPNDPSASSDAA 60
Query: 61 VPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD 120
+PQ GES A NGV+QVK R PRG+PR+PEKLE +ICKMMANREWTTRLQNSIRSLVPQFD
Sbjct: 61 LPQTGESAAVNGVQQVKGRIPRGRPRDPEKLEKIICKMMANREWTTRLQNSIRSLVPQFD 120
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
H+LV+NVLHAAKKS+HALNF+RWVERAGLFQHDRETH KIIEILGRASKLNHARCILLDM
Sbjct: 121 HNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDM 180
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
PNKGV+WDEDLFVVLI+SYGKAGIVQE+VK FQKMKELGVERSVKSYDALFK I+RRGRY
Sbjct: 181 PNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRY 240
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
MMAKRYFNAMLNEGIEP HTYNVMLWG FLSLRLETAKRFYEDMK+RGI PDVVTYNTM
Sbjct: 241 MMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTM 300
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
INGY RFKMMEE EQFFTEMKGKNI PTVISYTTMIKGYVSV R DD LRLFEEMKAAG
Sbjct: 301 INGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGE 360
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
KPNDITYSTLLPGLCDAEK+ EAR+ILTEMV + APKDNSIFMRLLSCQCKHGDLDAAM
Sbjct: 361 KPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAM 420
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
HVLKAMIRLSIPTEAGHYGILIENCCKA MYD+AVKLL+ LVEKEIILRPQSTLEMEASA
Sbjct: 421 HVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASA 480
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGR 540
YNLIIQYLCNHGQTGKA+TFFRQLLKKGI+DE AFNNLIRGH+KEGNP+LAFEMLKIMGR
Sbjct: 481 YNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGR 540
Query: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQT 600
RGVSRDAESYKLLIKSYLSKGEPADAKTALD+MIE+GH PDSALFRSVMESLF DGRVQT
Sbjct: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQT 600
Query: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC 660
ASRVMNSMLDKGITENLDLVAKILEALFMRGH EEALGRI+LLM+CNCPPDF+SLLSVLC
Sbjct: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPPDFNSLLSVLC 660
Query: 661 ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWS 720
E+GKT +A KLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAY+ILCKIMEKGGAKDWS
Sbjct: 661 EKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYAILCKIMEKGGAKDWS 720
Query: 721 SCDDLIKSLNQEGNTKQADILSRMVKGGDKKRSKKASLAA 761
SCDDLIKSLNQEGNTKQADILSRM+KGGD+KRSKK SLAA
Sbjct: 721 SCDDLIKSLNQEGNTKQADILSRMIKGGDRKRSKKPSLAA 760
BLAST of HG10008213 vs. NCBI nr
Match:
XP_008443807.2 (PREDICTED: pentatricopeptide repeat-containing protein At2g37230 [Cucumis melo])
HSP 1 Score: 1360.5 bits (3520), Expect = 0.0e+00
Identity = 683/752 (90.82%), Postives = 717/752 (95.35%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSLHFFSSTQEPISTATQNESPNDPSVSSDAA 60
MAHISVSKLH TH++VLSSSSISK TALNSLHFFSSTQEPIS ATQNESPNDP SS+AA
Sbjct: 1 MAHISVSKLHFTHYRVLSSSSISKPTALNSLHFFSSTQEPISPATQNESPNDPPASSNAA 60
Query: 61 VPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD 120
+PQ ES A NGV+QVK R PRG+PRN EKLED+IC+MMA+REWTTRLQNSIRSLVPQFD
Sbjct: 61 LPQTAESAAVNGVQQVKGRIPRGRPRNTEKLEDLICRMMASREWTTRLQNSIRSLVPQFD 120
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
H LV+NVLHAAKKS+HALNF+RWVERAGLFQHDRETHLKIIEILG ASKLNHARCILLDM
Sbjct: 121 HCLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHLKIIEILGGASKLNHARCILLDM 180
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
PNKGVEWDEDLFVVLIDSYGKAGIVQE+VK F+KMKELGVERS KSYDALFKVILRRGRY
Sbjct: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQEAVKIFRKMKELGVERSNKSYDALFKVILRRGRY 240
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
MMAKRYFNAMLNEG+EPT HTYNVMLWG FLSLRLETAKRFYEDMK+RGI PDVVTYNTM
Sbjct: 241 MMAKRYFNAMLNEGLEPTRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTM 300
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
INGY RFKMMEE EQFFTEMKGKNI PTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAG
Sbjct: 301 INGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGE 360
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
KPNDITYSTLLPGLCDAEK+ EAR+ILTEMV YIAPKDNSIFMRLLSCQCKHGDLDAAM
Sbjct: 361 KPNDITYSTLLPGLCDAEKLPEARKILTEMVARYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
HVLKAM+RLSIPTEAGHYGILIENCCKA MYDKAVKLLD+LVEKEIIL+PQSTLEMEASA
Sbjct: 421 HVLKAMLRLSIPTEAGHYGILIENCCKAGMYDKAVKLLDQLVEKEIILKPQSTLEMEASA 480
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGR 540
YNLIIQYLCNHGQTGKAE FFRQLLKKGI+DE AFNNLIRGH+KEGNPE AFEMLKIMGR
Sbjct: 481 YNLIIQYLCNHGQTGKAEIFFRQLLKKGIQDEVAFNNLIRGHAKEGNPEFAFEMLKIMGR 540
Query: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQT 600
RGVSRDAESYKLLIKSYLSKGEPADAKTALD+MIE+GH PDSALFRSVMESLF DGRVQT
Sbjct: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQT 600
Query: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC 660
ASRVMNSMLDKGITENLDLVAKILEALFMRGH EE LGRI+LLM+CNCPPDFDSLLSVLC
Sbjct: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEGLGRINLLMNCNCPPDFDSLLSVLC 660
Query: 661 ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWS 720
E+GKTIAA KLL+FGLERECNI+FSSYEKVLDAL+GAGKTLNAY+ILCKIMEKGGAKDWS
Sbjct: 661 EKGKTIAAFKLLNFGLERECNIQFSSYEKVLDALMGAGKTLNAYAILCKIMEKGGAKDWS 720
Query: 721 SCDDLIKSLNQEGNTKQADILSRMVKGGDKKR 753
SCDDLIK+LNQEGNTKQADILSRMVKGGD+KR
Sbjct: 721 SCDDLIKTLNQEGNTKQADILSRMVKGGDRKR 752
BLAST of HG10008213 vs. NCBI nr
Match:
XP_023515807.1 (pentatricopeptide repeat-containing protein At2g37230-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1357.4 bits (3512), Expect = 0.0e+00
Identity = 680/760 (89.47%), Postives = 715/760 (94.08%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSLHFFSSTQEPISTATQNESPNDPSVSSDAA 60
MAHIS+SK H +H KVLSSSSISK + NSLHFFSS Q+P +TATQNESP DP VSSDAA
Sbjct: 1 MAHISLSKPHYSHLKVLSSSSISKPISFNSLHFFSSIQDPTTTATQNESPKDPFVSSDAA 60
Query: 61 VPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD 120
VPQ E VA NG +QVKR PRG RNPEKLED+IC+MMANREWTTRLQNSIRSLVPQFD
Sbjct: 61 VPQPVEPVAVNGGDQVKRSIPRGNRRNPEKLEDIICRMMANREWTTRLQNSIRSLVPQFD 120
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
HS+VWNVLHAAK SDHAL F+RWVER+GLFQHDR TH KIIEILGRASKLNHARCILLDM
Sbjct: 121 HSIVWNVLHAAKNSDHALQFFRWVERSGLFQHDRGTHFKIIEILGRASKLNHARCILLDM 180
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
PNKGVEWDEDLFV++IDSYGKAGIVQE+VK FQKMKELGVERS+KSY+ LFKVILRRGRY
Sbjct: 181 PNKGVEWDEDLFVIMIDSYGKAGIVQEAVKIFQKMKELGVERSIKSYNVLFKVILRRGRY 240
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
MMAKRYFNAMLNEGIEPTCHTYNVMLWG FLSLRLETAKRFYEDMKTRGI PDVVTYNTM
Sbjct: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGFFLSLRLETAKRFYEDMKTRGIAPDVVTYNTM 300
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
INGYYRFKMMEE EQFFTEMKG N++PTVISYTTMIKGYVS GRVDDGLRLFEEMKA GV
Sbjct: 301 INGYYRFKMMEEAEQFFTEMKGNNLLPTVISYTTMIKGYVSSGRVDDGLRLFEEMKAVGV 360
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
KPND TYSTLLPGLCDAEKMSEARQILTEMVD YIAPKDNSIFMRLLSCQCKHGDLDAAM
Sbjct: 361 KPNDFTYSTLLPGLCDAEKMSEARQILTEMVDKYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
HVLKAMIRLSIPTEAGHYGILIENCCKA +YD+AVKLLDKLVEKEIIL+PQSTLEMEASA
Sbjct: 421 HVLKAMIRLSIPTEAGHYGILIENCCKAGVYDRAVKLLDKLVEKEIILKPQSTLEMEASA 480
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGR 540
YN IIQYLC+HGQTGKAETFFRQLLKKGI+DE AFNNLIRGHSKEGNPELAFE+LKIMGR
Sbjct: 481 YNPIIQYLCDHGQTGKAETFFRQLLKKGIQDEVAFNNLIRGHSKEGNPELAFEILKIMGR 540
Query: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQT 600
+ VSRDAESYKLLIKSYLSKGEPADAKTALD+MIESGH+PDSALFRSVMESLF DGRVQT
Sbjct: 541 KSVSRDAESYKLLIKSYLSKGEPADAKTALDSMIESGHYPDSALFRSVMESLFADGRVQT 600
Query: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC 660
ASRVMNSMLDKGITEN+DLVAKILEALFMRGHVEEALGR+DLLM C+CPPDFDSLLSVLC
Sbjct: 601 ASRVMNSMLDKGITENMDLVAKILEALFMRGHVEEALGRVDLLMRCSCPPDFDSLLSVLC 660
Query: 661 ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWS 720
E+GKTIAALKLLDFGLERECNIE SSYEKVLDALL AGKTLNAYSILCKIMEKGGAK+WS
Sbjct: 661 EKGKTIAALKLLDFGLERECNIEVSSYEKVLDALLAAGKTLNAYSILCKIMEKGGAKEWS 720
Query: 721 SCDDLIKSLNQEGNTKQADILSRMVKGGDKKRSKKASLAA 761
SCDDLI SLNQEG+TKQADILSRM+KGGD+ R KKAS AA
Sbjct: 721 SCDDLINSLNQEGHTKQADILSRMIKGGDRIRRKKASPAA 760
BLAST of HG10008213 vs. ExPASy Swiss-Prot
Match:
Q9ZUU3 (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana OX=3702 GN=At2g37230 PE=2 SV=1)
HSP 1 Score: 1005.7 bits (2599), Expect = 2.7e-292
Identity = 512/762 (67.19%), Postives = 616/762 (80.84%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSL-HFFSSTQEPISTATQNESPNDPSVSSDA 60
MA IS SK + + +V S S ++L SL FS+ +E TQ + +P S
Sbjct: 1 MAFISRSKRYQSKARVYLSLPRSSNSSLFSLPRLFSTIEE-----TQTPANANPETQSPD 60
Query: 61 AVPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQF 120
A + +++ ++ R RGK +N EKLED IC+MM NR WTTRLQNSIR LVP++
Sbjct: 61 AKSETKKNLTSTETRPLRERFQRGKRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEW 120
Query: 121 DHSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLD 180
DHSLV+NVLH AKK +HAL F+RW ER+GL +HDR+TH+K+I++LG SKLNHARCILLD
Sbjct: 121 DHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLD 180
Query: 181 MPNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGR 240
MP KGV WDED+FVVLI+SYGKAGIVQESVK FQKMK+LGVER++KSY++LFKVILRRGR
Sbjct: 181 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 240
Query: 241 YMMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNT 300
YMMAKRYFN M++EG+EPT HTYN+MLWG FLSLRLETA RF+EDMKTRGI PD T+NT
Sbjct: 241 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 300
Query: 301 MINGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAG 360
MING+ RFK M+E E+ F EMKG I P+V+SYTTMIKGY++V RVDDGLR+FEEM+++G
Sbjct: 301 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 360
Query: 361 VKPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAA 420
++PN TYSTLLPGLCDA KM EA+ IL M+ +IAPKDNSIF++LL Q K GD+ AA
Sbjct: 361 IEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAA 420
Query: 421 MHVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEAS 480
VLKAM L++P EAGHYG+LIEN CKA Y++A+KLLD L+EKEIILR Q TLEME S
Sbjct: 421 TEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS 480
Query: 481 AYNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMG 540
AYN II+YLCN+GQT KAE FRQL+K+G++D+ A NNLIRGH+KEGNP+ ++E+LKIM
Sbjct: 481 AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMS 540
Query: 541 RRGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQ 600
RRGV R++ +Y+LLIKSY+SKGEP DAKTALD+M+E GH PDS+LFRSV+ESLF DGRVQ
Sbjct: 541 RRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQ 600
Query: 601 TASRVMNSMLDK--GITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLS 660
TASRVM M+DK GI +N+DL+AKILEAL MRGHVEEALGRIDLL D DSLLS
Sbjct: 601 TASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLS 660
Query: 661 VLCERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAK 720
VL E+GKTIAALKLLDFGLER+ ++EFSSY+KVLDALLGAGKTLNAYS+LCKIMEKG +
Sbjct: 661 VLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSST 720
Query: 721 DWSSCDDLIKSLNQEGNTKQADILSRMVKGGDK-KRSKKASL 759
DW S D+LIKSLNQEGNTKQAD+LSRM+K G K+ SL
Sbjct: 721 DWKSSDELIKSLNQEGNTKQADVLSRMIKKGQGIKKQNNVSL 757
BLAST of HG10008213 vs. ExPASy Swiss-Prot
Match:
O81908 (Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g02060 PE=2 SV=2)
HSP 1 Score: 351.3 bits (900), Expect = 2.8e-95
Identity = 215/664 (32.38%), Postives = 351/664 (52.86%), Query Frame = 0
Query: 90 KLEDVICKMMANREWTTRLQNSIRSLVPQ--FDHSLVWNVLHAAKKSDHALNFYRWVERA 149
KL + + + + W+ L++S+ SL P + V L K L F+ WV
Sbjct: 35 KLARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQTLRLIKVPADGLRFFDWVSNK 94
Query: 150 GLFQHDRETHLKIIEILGRASKLNHARCILLDMPNKG---VEWDEDLFVVLIDSYGKAGI 209
G F H ++ ++E LGRA LN AR L + + V+ + F LI SYG AG+
Sbjct: 95 G-FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGL 154
Query: 210 VQESVKCFQKMKELGVERSVKSYDALFKVILRRGRYMMAKRYFNAMLNE-GIEPTCHTYN 269
QESVK FQ MK++G+ SV ++++L ++L+RGR MA F+ M G+ P +T+N
Sbjct: 155 FQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFN 214
Query: 270 VMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTMINGYYRFKMMEEGEQFFTEM--K 329
++ G + ++ A R ++DM+ PDVVTYNT+I+G R ++ + M K
Sbjct: 215 TLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKK 274
Query: 330 GKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGVKPNDITYSTLLPGLCDAEKMS 389
++ P V+SYTT+++GY +D+ + +F +M + G+KPN +TY+TL+ GL +A +
Sbjct: 275 ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYD 334
Query: 390 EARQILTEMVDNY--IAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYG 449
E + IL D + AP D F L+ C G LDAAM V + M+ + + ++ Y
Sbjct: 335 EIKDILIGGNDAFTTFAP-DACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYS 394
Query: 450 ILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKAET 509
+LI C +D+A L ++L EKE++L + A+AYN + +YLC +G+T +AE
Sbjct: 395 VLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL-AAAYNPMFEYLCANGKTKQAEK 454
Query: 510 FFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGRRGVSRDAESYKLLIKSYLS 569
FRQL+K+G++D ++ LI GH +EG + A+E+L +M RR D E+Y+LLI L
Sbjct: 455 VFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLK 514
Query: 570 KGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQTASRVMNSMLDKGITENLDL 629
GE A L M+ S + P + F SV+ L + ++ ML+K I +N+DL
Sbjct: 515 IGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDL 574
Query: 630 VAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLCERGKTIAALKLLDFGLERE 689
+++ LF E+A + LL + LL LCE K + A L+ F LE+
Sbjct: 575 STQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKS 634
Query: 690 CNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWSSCDDLIKSLNQEGNTKQAD 744
++ + V++ L + A+S+ +++E G + S L +L G ++
Sbjct: 635 QMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQ 694
BLAST of HG10008213 vs. ExPASy Swiss-Prot
Match:
Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)
HSP 1 Score: 203.0 bits (515), Expect = 1.2e-50
Identity = 124/443 (27.99%), Postives = 218/443 (49.21%), Query Frame = 0
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
++LV + K SD + R VE FQ + T+ ++ ++ ++ + A +L M
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETG--FQPNEVTYGPVLNVMCKSGQTALAMELLRKM 256
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
+ ++ D + ++ID K G + + F +M+ G + + +Y+ L GR+
Sbjct: 257 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 316
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
+ M+ I P T++V++ +L A + ++M RGI P+ +TYN++
Sbjct: 317 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 376
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
I+G+ + +EE Q M K P ++++ +I GY R+DDGL LF EM GV
Sbjct: 377 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 436
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
N +TY+TL+ G C + K+ A+++ EMV + P D + LL C +G+L+ A+
Sbjct: 437 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP-DIVSYKILLDGLCDNGELEKAL 496
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
+ + + + + G Y I+I C A D A L L P ++++A A
Sbjct: 497 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL--------PLKGVKLDARA 556
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKG-IKDEAAFNNLIRGHSKEGNPELAFEMLKIMG 540
YN++I LC KA+ FR++ ++G DE +N LIR H + + A E+++ M
Sbjct: 557 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 616
Query: 541 RRGVSRDAESYKLLIKSYLSKGE 563
G D + K++I + LS GE
Sbjct: 617 SSGFPADVSTVKMVI-NMLSSGE 627
BLAST of HG10008213 vs. ExPASy Swiss-Prot
Match:
Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 5.1e-49
Identity = 148/672 (22.02%), Postives = 302/672 (44.94%), Query Frame = 0
Query: 111 SIRSLVPQFDHSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEIL---GRA 170
S++S+V S V ++ ALNF W+ + ++H ++ ++ +L G
Sbjct: 80 SLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYV 139
Query: 171 SKLNHARCIL-------------LDMPNKGVEWDE----------DLFVVLIDSYGKAGI 230
+ R ++ LD+ K + DE + L++S + G+
Sbjct: 140 GVVFKIRLLMIKSCDSVGDALYVLDLCRK-MNKDERFELKYKLIIGCYNTLLNSLARFGL 199
Query: 231 VQESVKCFQKMKELGVERSVKSYDALFKVILRRGRYMMAKRYFNAMLNEGIEPTCHTYNV 290
V E + + +M E V ++ +Y+ + + G A +Y + ++ G++P TY
Sbjct: 200 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 259
Query: 291 MLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTMINGYYRFKMMEEGEQFFTEMKGKN 350
++ G L++A + + +M +G + V Y +I+G + ++E F +MK
Sbjct: 260 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 319
Query: 351 IVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGVKPNDITYSTLLPGLCDAEKMSEAR 410
PTV +YT +IK R + L L +EM+ G+KPN TY+ L+ LC K +AR
Sbjct: 320 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 379
Query: 411 QILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIEN 470
++L +M++ + P + + L++ CK G ++ A+ V++ M + Y LI+
Sbjct: 380 ELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 439
Query: 471 CCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKAETFFRQL 530
CK+ ++ KA+ +L+K++E++++ + YN +I C G A +
Sbjct: 440 YCKSNVH-KAMGVLNKMLERKVL--------PDVVTYNSLIDGQCRSGNFDSAYRLLSLM 499
Query: 531 LKKG-IKDEAAFNNLIRGHSKEGNPELAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEP 590
+G + D+ + ++I K E A ++ + ++GV+ + Y LI Y G+
Sbjct: 500 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 559
Query: 591 ADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQTASRVMNSMLDKGITENLDLVAKI 650
+A L+ M+ P+S F +++ L DG+++ A+ + M+ G+ + +
Sbjct: 560 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 619
Query: 651 LEALFMRGHVEEALGRIDLLMSCNCPPD---FDSLLSVLCERGKTIAALKLLDFGLEREC 710
+ L G + A R ++S PD + + + C G+ + A ++ E
Sbjct: 620 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 679
Query: 711 NIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWSSCDDLIKSL------NQEGN 747
+ + +Y ++ G+T A+ +L ++ + G + LIK L Q+G+
Sbjct: 680 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 739
BLAST of HG10008213 vs. ExPASy Swiss-Prot
Match:
Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 5.7e-48
Identity = 114/406 (28.08%), Postives = 203/406 (50.00%), Query Frame = 0
Query: 150 FQHDRETHLKIIEILGRASKLNHARCILLDMPNKGVEWDEDLFVVLIDSYGKAGIVQESV 209
FQ D T+ ++ L ++ A + M + ++ + ++IDS K G +++
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 210 KCFQKMKELGVERSVKSYDALFKVILRRGRYMMAKRYFNAMLNEGIEPTCHTYNVMLWGL 269
F +M+ G++ V +Y +L + G++ + M+ I P T++ ++
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 270 FLSLRLETAKRFYEDMKTRGILPDVVTYNTMINGYYRFKMMEEGEQFFTEMKGKNIVPTV 329
+L AK Y +M TRGI PD +TYN++I+G+ + + E Q F M K P +
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 330 ISYTTMIKGYVSVGRVDDGLRLFEEMKAAGVKPNDITYSTLLPGLCDAEKMSEARQILTE 389
++Y+ +I Y RVDDG+RLF E+ + G+ PN ITY+TL+ G C + K++ A+++ E
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 390 MVDNYIAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAR 449
MV + P + + LL C +G+L+ A+ + + M + + G Y I+I C A
Sbjct: 446 MVSRGVPPSVVT-YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 505
Query: 450 MYDKAVKLLDKLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKAETFFRQLLKKG- 509
D A L L +K + + + YN++I LC G +A+ FR++ + G
Sbjct: 506 KVDDAWSLFCSLSDKGV--------KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 565
Query: 510 IKDEAAFNNLIRGHSKEGNPELAFEMLKIMGRRGVSRDAESYKLLI 555
D+ +N LIR H + E+++ M G S D+ + K++I
Sbjct: 566 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
BLAST of HG10008213 vs. ExPASy TrEMBL
Match:
A0A5A7T0L7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00160 PE=3 SV=1)
HSP 1 Score: 1370.9 bits (3547), Expect = 0.0e+00
Identity = 690/760 (90.79%), Postives = 725/760 (95.39%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSLHFFSSTQEPISTATQNESPNDPSVSSDAA 60
MAHISVSKLH TH++VLSSSSISK TALNSLHFFSSTQEPIS ATQNESPNDP SS+AA
Sbjct: 1 MAHISVSKLHFTHYRVLSSSSISKPTALNSLHFFSSTQEPISPATQNESPNDPPASSNAA 60
Query: 61 VPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD 120
+PQ ES A NGV+QVK R PRG+PRN EKLED+IC+MMA+REWTTRLQNSIRSLVPQFD
Sbjct: 61 LPQTAESAAVNGVQQVKGRIPRGRPRNTEKLEDLICRMMASREWTTRLQNSIRSLVPQFD 120
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
H LV+NVLHAAKKS+HALNF+RWVERAGLFQHDRETHLKIIEILG ASKLNHARCILLDM
Sbjct: 121 HCLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHLKIIEILGGASKLNHARCILLDM 180
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
PNKGVEWDEDLFVVLIDSYGKAGIVQE+VK F+KMKELGVERS KSYDALFKVILRRGRY
Sbjct: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQEAVKIFRKMKELGVERSNKSYDALFKVILRRGRY 240
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
MMAKRYFNAMLNEG+EPT HTYNVMLWG FLSLRLETAKRFYEDMK+RGI PDVVTYNTM
Sbjct: 241 MMAKRYFNAMLNEGLEPTRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTM 300
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
INGY RFKMMEE EQFFTEMKGKNI PTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAG
Sbjct: 301 INGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGE 360
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
KPNDITYSTLLPGLCDAEK+ EAR+ILTEMV YIAPKDNSIFMRLLSCQCKHGDLDAAM
Sbjct: 361 KPNDITYSTLLPGLCDAEKLPEARKILTEMVARYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
HVLKAM+RLSIPTEAGHYGILIENCCKA MYDKAVKLLD+LVEKEIIL+PQSTLEMEASA
Sbjct: 421 HVLKAMLRLSIPTEAGHYGILIENCCKAGMYDKAVKLLDQLVEKEIILKPQSTLEMEASA 480
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGR 540
YNLIIQYLCNHGQTGKAE FFRQLLKKGI+DE AFNNLIRGH+KEGNPE AFEMLKIMGR
Sbjct: 481 YNLIIQYLCNHGQTGKAEIFFRQLLKKGIQDEVAFNNLIRGHAKEGNPEFAFEMLKIMGR 540
Query: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQT 600
RGVSRDAESYKLLIKSYLSKGEPADAKTALD+MIE+GH PDSALFRSVMESLF DGRVQT
Sbjct: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQT 600
Query: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC 660
ASRVMNSMLDKGITENLDLVAKILEALFMRGH EE LGRI+LLM+CNCPPDFDSLLSVLC
Sbjct: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEGLGRINLLMNCNCPPDFDSLLSVLC 660
Query: 661 ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWS 720
E+GKTIAA KLL+FGLERECNI+FSSYEKVLDAL+GAGKTLNAY+ILCKIMEKGGAKDWS
Sbjct: 661 EKGKTIAAFKLLNFGLERECNIQFSSYEKVLDALMGAGKTLNAYAILCKIMEKGGAKDWS 720
Query: 721 SCDDLIKSLNQEGNTKQADILSRMVKGGDKKRSKKASLAA 761
SCDDLIK+LNQEGNTKQADILSRMVKGGD+KRSKK+SLAA
Sbjct: 721 SCDDLIKTLNQEGNTKQADILSRMVKGGDRKRSKKSSLAA 760
BLAST of HG10008213 vs. ExPASy TrEMBL
Match:
A0A0A0LTL3 (PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G293020 PE=3 SV=1)
HSP 1 Score: 1369.0 bits (3542), Expect = 0.0e+00
Identity = 688/760 (90.53%), Postives = 723/760 (95.13%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSLHFFSSTQEPISTATQNESPNDPSVSSDAA 60
MAHISVSKLH TH++VLSSSSISK TALNSLHFFSSTQEPISTATQN SPNDPS SSDAA
Sbjct: 1 MAHISVSKLHFTHYRVLSSSSISKPTALNSLHFFSSTQEPISTATQNGSPNDPSASSDAA 60
Query: 61 VPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD 120
+PQ GES A NGV+QVK R PRG+PR+PEKLE +ICKMMANREWTTRLQNSIRSLVPQFD
Sbjct: 61 LPQTGESAAVNGVQQVKGRIPRGRPRDPEKLEKIICKMMANREWTTRLQNSIRSLVPQFD 120
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
H+LV+NVLHAAKKS+HALNF+RWVERAGLFQHDRETH KIIEILGRASKLNHARCILLDM
Sbjct: 121 HNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDM 180
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
PNKGV+WDEDLFVVLI+SYGKAGIVQE+VK FQKMKELGVERSVKSYDALFK I+RRGRY
Sbjct: 181 PNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRY 240
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
MMAKRYFNAMLNEGIEP HTYNVMLWG FLSLRLETAKRFYEDMK+RGI PDVVTYNTM
Sbjct: 241 MMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTM 300
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
INGY RFKMMEE EQFFTEMKGKNI PTVISYTTMIKGYVSV R DD LRLFEEMKAAG
Sbjct: 301 INGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGE 360
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
KPNDITYSTLLPGLCDAEK+ EAR+ILTEMV + APKDNSIFMRLLSCQCKHGDLDAAM
Sbjct: 361 KPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAM 420
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
HVLKAMIRLSIPTEAGHYGILIENCCKA MYD+AVKLL+ LVEKEIILRPQSTLEMEASA
Sbjct: 421 HVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASA 480
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGR 540
YNLIIQYLCNHGQTGKA+TFFRQLLKKGI+DE AFNNLIRGH+KEGNP+LAFEMLKIMGR
Sbjct: 481 YNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGR 540
Query: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQT 600
RGVSRDAESYKLLIKSYLSKGEPADAKTALD+MIE+GH PDSALFRSVMESLF DGRVQT
Sbjct: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQT 600
Query: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC 660
ASRVMNSMLDKGITENLDLVAKILEALFMRGH EEALGRI+LLM+CNCPPDF+SLLSVLC
Sbjct: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCNCPPDFNSLLSVLC 660
Query: 661 ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWS 720
E+GKT +A KLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAY+ILCKIMEKGGAKDWS
Sbjct: 661 EKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYAILCKIMEKGGAKDWS 720
Query: 721 SCDDLIKSLNQEGNTKQADILSRMVKGGDKKRSKKASLAA 761
SCDDLIKSLNQEGNTKQADILSRM+KGGD+KRSKK SLAA
Sbjct: 721 SCDDLIKSLNQEGNTKQADILSRMIKGGDRKRSKKPSLAA 760
BLAST of HG10008213 vs. ExPASy TrEMBL
Match:
A0A1S3B8Y6 (pentatricopeptide repeat-containing protein At2g37230 OS=Cucumis melo OX=3656 GN=LOC103487310 PE=3 SV=1)
HSP 1 Score: 1360.5 bits (3520), Expect = 0.0e+00
Identity = 683/752 (90.82%), Postives = 717/752 (95.35%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSLHFFSSTQEPISTATQNESPNDPSVSSDAA 60
MAHISVSKLH TH++VLSSSSISK TALNSLHFFSSTQEPIS ATQNESPNDP SS+AA
Sbjct: 1 MAHISVSKLHFTHYRVLSSSSISKPTALNSLHFFSSTQEPISPATQNESPNDPPASSNAA 60
Query: 61 VPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD 120
+PQ ES A NGV+QVK R PRG+PRN EKLED+IC+MMA+REWTTRLQNSIRSLVPQFD
Sbjct: 61 LPQTAESAAVNGVQQVKGRIPRGRPRNTEKLEDLICRMMASREWTTRLQNSIRSLVPQFD 120
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
H LV+NVLHAAKKS+HALNF+RWVERAGLFQHDRETHLKIIEILG ASKLNHARCILLDM
Sbjct: 121 HCLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHLKIIEILGGASKLNHARCILLDM 180
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
PNKGVEWDEDLFVVLIDSYGKAGIVQE+VK F+KMKELGVERS KSYDALFKVILRRGRY
Sbjct: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQEAVKIFRKMKELGVERSNKSYDALFKVILRRGRY 240
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
MMAKRYFNAMLNEG+EPT HTYNVMLWG FLSLRLETAKRFYEDMK+RGI PDVVTYNTM
Sbjct: 241 MMAKRYFNAMLNEGLEPTRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTM 300
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
INGY RFKMMEE EQFFTEMKGKNI PTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAG
Sbjct: 301 INGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGE 360
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
KPNDITYSTLLPGLCDAEK+ EAR+ILTEMV YIAPKDNSIFMRLLSCQCKHGDLDAAM
Sbjct: 361 KPNDITYSTLLPGLCDAEKLPEARKILTEMVARYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
HVLKAM+RLSIPTEAGHYGILIENCCKA MYDKAVKLLD+LVEKEIIL+PQSTLEMEASA
Sbjct: 421 HVLKAMLRLSIPTEAGHYGILIENCCKAGMYDKAVKLLDQLVEKEIILKPQSTLEMEASA 480
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGR 540
YNLIIQYLCNHGQTGKAE FFRQLLKKGI+DE AFNNLIRGH+KEGNPE AFEMLKIMGR
Sbjct: 481 YNLIIQYLCNHGQTGKAEIFFRQLLKKGIQDEVAFNNLIRGHAKEGNPEFAFEMLKIMGR 540
Query: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQT 600
RGVSRDAESYKLLIKSYLSKGEPADAKTALD+MIE+GH PDSALFRSVMESLF DGRVQT
Sbjct: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQT 600
Query: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC 660
ASRVMNSMLDKGITENLDLVAKILEALFMRGH EE LGRI+LLM+CNCPPDFDSLLSVLC
Sbjct: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEGLGRINLLMNCNCPPDFDSLLSVLC 660
Query: 661 ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWS 720
E+GKTIAA KLL+FGLERECNI+FSSYEKVLDAL+GAGKTLNAY+ILCKIMEKGGAKDWS
Sbjct: 661 EKGKTIAAFKLLNFGLERECNIQFSSYEKVLDALMGAGKTLNAYAILCKIMEKGGAKDWS 720
Query: 721 SCDDLIKSLNQEGNTKQADILSRMVKGGDKKR 753
SCDDLIK+LNQEGNTKQADILSRMVKGGD+KR
Sbjct: 721 SCDDLIKTLNQEGNTKQADILSRMVKGGDRKR 752
BLAST of HG10008213 vs. ExPASy TrEMBL
Match:
A0A6J1E1L0 (pentatricopeptide repeat-containing protein At2g37230-like OS=Cucurbita moschata OX=3662 GN=LOC111430005 PE=4 SV=1)
HSP 1 Score: 1352.8 bits (3500), Expect = 0.0e+00
Identity = 678/760 (89.21%), Postives = 713/760 (93.82%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSLHFFSSTQEPISTATQNESPNDPSVSSDAA 60
MAHIS+SK H +H KVLSSSSISK + NSLHFFSSTQ+P +TATQNESP DP VSSDAA
Sbjct: 1 MAHISLSKPHYSHLKVLSSSSISKPISFNSLHFFSSTQDPTTTATQNESPKDPFVSSDAA 60
Query: 61 VPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD 120
VPQ E VA NG +QVKR PRG RNPEKLED+IC+MMANREWTTRLQNSIRSLVPQFD
Sbjct: 61 VPQPVEPVAVNGGDQVKRSIPRGNRRNPEKLEDIICRMMANREWTTRLQNSIRSLVPQFD 120
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
HS+VWNVLHAAK SDHAL F+RWVERAGLFQHDR TH KIIEILGRASKLNHARCILLDM
Sbjct: 121 HSIVWNVLHAAKNSDHALKFFRWVERAGLFQHDRGTHFKIIEILGRASKLNHARCILLDM 180
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
PNKGVEWDEDLFV++IDSYGKAGIVQE+VK FQKMKELGVERS+KSY+ LFKVILRRGRY
Sbjct: 181 PNKGVEWDEDLFVIMIDSYGKAGIVQEAVKIFQKMKELGVERSIKSYNVLFKVILRRGRY 240
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
MMAKRYFNAMLNEGIEPTCHTYNVMLWG FLSLRLETAKRFYEDMKTRGI PDVVTYNTM
Sbjct: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGFFLSLRLETAKRFYEDMKTRGIAPDVVTYNTM 300
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
INGYYRFKMMEE EQFFTEMKGKN+VPTVISYTTMIKGYVS GRVDDGLRLFEEMKA GV
Sbjct: 301 INGYYRFKMMEEAEQFFTEMKGKNLVPTVISYTTMIKGYVSSGRVDDGLRLFEEMKAVGV 360
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
KPND TYSTLLPGLCDAE+MSEARQILTEMVD YIAPKDNSIFMRLLSCQCKHGDLDAAM
Sbjct: 361 KPNDFTYSTLLPGLCDAERMSEARQILTEMVDKYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
HVLKAM RLS+PTEAGHYGILIENCCKA +YD+AVKLLDKLVEKEIIL+PQSTLEMEASA
Sbjct: 421 HVLKAMTRLSVPTEAGHYGILIENCCKAGVYDRAVKLLDKLVEKEIILKPQSTLEMEASA 480
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGR 540
YN +IQYLC+HGQTGKAETFFRQLLKKGI+DE AFNNLIRGHSKEGNPELAFE+LKIMGR
Sbjct: 481 YNPVIQYLCDHGQTGKAETFFRQLLKKGIQDEVAFNNLIRGHSKEGNPELAFEILKIMGR 540
Query: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQT 600
+ VSRDAESYKLLIKSYLSKGEPADAKTALD+MIESGH+PDSALFRSVMESLF DGRVQT
Sbjct: 541 KSVSRDAESYKLLIKSYLSKGEPADAKTALDSMIESGHYPDSALFRSVMESLFADGRVQT 600
Query: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC 660
ASRVMNSML KGITENLDLVAKILEALFMRGHVEEALGR+DLLM +CPPDFDSLLSVLC
Sbjct: 601 ASRVMNSMLHKGITENLDLVAKILEALFMRGHVEEALGRVDLLMRSSCPPDFDSLLSVLC 660
Query: 661 ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWS 720
E+GKTIAALKLLDFGLERECNIE SSYEKVLDALL AGKTLNAYSILCKIMEKGGAK+WS
Sbjct: 661 EKGKTIAALKLLDFGLERECNIEVSSYEKVLDALLAAGKTLNAYSILCKIMEKGGAKEWS 720
Query: 721 SCDDLIKSLNQEGNTKQADILSRMVKGGDKKRSKKASLAA 761
SCDDLI SLNQEG+TKQADILSRM+KGGD+ R KKAS A
Sbjct: 721 SCDDLISSLNQEGHTKQADILSRMIKGGDRIRRKKASPTA 760
BLAST of HG10008213 vs. ExPASy TrEMBL
Match:
A0A6J1JJW0 (pentatricopeptide repeat-containing protein At2g37230-like OS=Cucurbita maxima OX=3661 GN=LOC111485759 PE=4 SV=1)
HSP 1 Score: 1348.6 bits (3489), Expect = 0.0e+00
Identity = 679/760 (89.34%), Postives = 711/760 (93.55%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSLHFFSSTQEPISTATQNESPNDPSVSSDAA 60
MAHIS+SK H +H KV SSSSISK + NSLHFFSSTQ+PIST TQNESPNDP VSSDAA
Sbjct: 1 MAHISLSKPHYSHLKVFSSSSISKLISFNSLHFFSSTQDPISTPTQNESPNDPFVSSDAA 60
Query: 61 VPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQFD 120
VPQ+ E VA NG +QVKR PRG RNPEKLED+IC+MMANREWTTRLQNSIRSLVPQFD
Sbjct: 61 VPQSVEPVAVNGGDQVKRTIPRGNRRNPEKLEDIICRMMANREWTTRLQNSIRSLVPQFD 120
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
HSLVWNVLHAAK SDHAL F+RWVERAGLFQHDR TH KIIEILGRASKLNHARCILLDM
Sbjct: 121 HSLVWNVLHAAKNSDHALKFFRWVERAGLFQHDRGTHFKIIEILGRASKLNHARCILLDM 180
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
P KGVEWDEDLFV++IDSYGKAGIVQE+VK FQKMKELGVERS+KSYDALFKVILRRGRY
Sbjct: 181 PKKGVEWDEDLFVIMIDSYGKAGIVQEAVKIFQKMKELGVERSIKSYDALFKVILRRGRY 240
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
MMAKRYFN MLNEGIEPT HTYNVMLWG FLSLRLETAKRFYEDMKTRGI PDVVTYNTM
Sbjct: 241 MMAKRYFNTMLNEGIEPTRHTYNVMLWGFFLSLRLETAKRFYEDMKTRGIAPDVVTYNTM 300
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
INGY+RFKMMEE EQFFTEMKGKNIVPTVISYTTMIKGYVS GRVDDGLRLFEEMKA GV
Sbjct: 301 INGYHRFKMMEEAEQFFTEMKGKNIVPTVISYTTMIKGYVSSGRVDDGLRLFEEMKAVGV 360
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
KPND+TYSTLLPGLCDAEKM EA QILTEMVD YIAPKDNSIFMRLLSCQC HGDLDAAM
Sbjct: 361 KPNDVTYSTLLPGLCDAEKMFEAGQILTEMVDRYIAPKDNSIFMRLLSCQCMHGDLDAAM 420
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
HVLKAM RLS+PTEAGHYGILIENCCKA +YD+AVKLLDKLV+KEIIL+PQSTLEMEASA
Sbjct: 421 HVLKAMNRLSVPTEAGHYGILIENCCKAGVYDRAVKLLDKLVKKEIILKPQSTLEMEASA 480
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGR 540
YN IIQYLC+HGQTGKAETFFRQLLKKGI+DE AFNNLIRGHSKEGNPELAFEMLKIMGR
Sbjct: 481 YNPIIQYLCDHGQTGKAETFFRQLLKKGIQDEIAFNNLIRGHSKEGNPELAFEMLKIMGR 540
Query: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQT 600
+ VSRDAESYKLLIKSYLSKGEPADAKTALD+MIESGH+PDSALFRSVMESLF DGRVQT
Sbjct: 541 KSVSRDAESYKLLIKSYLSKGEPADAKTALDSMIESGHYPDSALFRSVMESLFADGRVQT 600
Query: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLC 660
ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGR+DLLM C+CPPDFDSLLSVLC
Sbjct: 601 ASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRVDLLMRCSCPPDFDSLLSVLC 660
Query: 661 ERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWS 720
E+GKTIAALKLLDFGLERECNIE SSYEKVLDALL AGKTLNAYSILCKIMEKGGAK+WS
Sbjct: 661 EKGKTIAALKLLDFGLERECNIEVSSYEKVLDALLAAGKTLNAYSILCKIMEKGGAKEWS 720
Query: 721 SCDDLIKSLNQEGNTKQADILSRMVKGGDKKRSKKASLAA 761
SCDDLI SLNQEG+TKQAD+LSRM+KGGD R K AS AA
Sbjct: 721 SCDDLISSLNQEGHTKQADVLSRMIKGGDGIRRKNASPAA 760
BLAST of HG10008213 vs. TAIR 10
Match:
AT2G37230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1005.7 bits (2599), Expect = 1.9e-293
Identity = 512/762 (67.19%), Postives = 616/762 (80.84%), Query Frame = 0
Query: 1 MAHISVSKLHPTHFKVLSSSSISKTTALNSL-HFFSSTQEPISTATQNESPNDPSVSSDA 60
MA IS SK + + +V S S ++L SL FS+ +E TQ + +P S
Sbjct: 1 MAFISRSKRYQSKARVYLSLPRSSNSSLFSLPRLFSTIEE-----TQTPANANPETQSPD 60
Query: 61 AVPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQF 120
A + +++ ++ R RGK +N EKLED IC+MM NR WTTRLQNSIR LVP++
Sbjct: 61 AKSETKKNLTSTETRPLRERFQRGKRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEW 120
Query: 121 DHSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLD 180
DHSLV+NVLH AKK +HAL F+RW ER+GL +HDR+TH+K+I++LG SKLNHARCILLD
Sbjct: 121 DHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLD 180
Query: 181 MPNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGR 240
MP KGV WDED+FVVLI+SYGKAGIVQESVK FQKMK+LGVER++KSY++LFKVILRRGR
Sbjct: 181 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 240
Query: 241 YMMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNT 300
YMMAKRYFN M++EG+EPT HTYN+MLWG FLSLRLETA RF+EDMKTRGI PD T+NT
Sbjct: 241 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 300
Query: 301 MINGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAG 360
MING+ RFK M+E E+ F EMKG I P+V+SYTTMIKGY++V RVDDGLR+FEEM+++G
Sbjct: 301 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 360
Query: 361 VKPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAA 420
++PN TYSTLLPGLCDA KM EA+ IL M+ +IAPKDNSIF++LL Q K GD+ AA
Sbjct: 361 IEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAA 420
Query: 421 MHVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEAS 480
VLKAM L++P EAGHYG+LIEN CKA Y++A+KLLD L+EKEIILR Q TLEME S
Sbjct: 421 TEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS 480
Query: 481 AYNLIIQYLCNHGQTGKAETFFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMG 540
AYN II+YLCN+GQT KAE FRQL+K+G++D+ A NNLIRGH+KEGNP+ ++E+LKIM
Sbjct: 481 AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMS 540
Query: 541 RRGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQ 600
RRGV R++ +Y+LLIKSY+SKGEP DAKTALD+M+E GH PDS+LFRSV+ESLF DGRVQ
Sbjct: 541 RRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQ 600
Query: 601 TASRVMNSMLDK--GITENLDLVAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLS 660
TASRVM M+DK GI +N+DL+AKILEAL MRGHVEEALGRIDLL D DSLLS
Sbjct: 601 TASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLS 660
Query: 661 VLCERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAK 720
VL E+GKTIAALKLLDFGLER+ ++EFSSY+KVLDALLGAGKTLNAYS+LCKIMEKG +
Sbjct: 661 VLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSST 720
Query: 721 DWSSCDDLIKSLNQEGNTKQADILSRMVKGGDK-KRSKKASL 759
DW S D+LIKSLNQEGNTKQAD+LSRM+K G K+ SL
Sbjct: 721 DWKSSDELIKSLNQEGNTKQADVLSRMIKKGQGIKKQNNVSL 757
BLAST of HG10008213 vs. TAIR 10
Match:
AT1G02060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 351.3 bits (900), Expect = 2.0e-96
Identity = 215/664 (32.38%), Postives = 351/664 (52.86%), Query Frame = 0
Query: 90 KLEDVICKMMANREWTTRLQNSIRSLVPQ--FDHSLVWNVLHAAKKSDHALNFYRWVERA 149
KL + + + + W+ L++S+ SL P + V L K L F+ WV
Sbjct: 35 KLARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQTLRLIKVPADGLRFFDWVSNK 94
Query: 150 GLFQHDRETHLKIIEILGRASKLNHARCILLDMPNKG---VEWDEDLFVVLIDSYGKAGI 209
G F H ++ ++E LGRA LN AR L + + V+ + F LI SYG AG+
Sbjct: 95 G-FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGL 154
Query: 210 VQESVKCFQKMKELGVERSVKSYDALFKVILRRGRYMMAKRYFNAMLNE-GIEPTCHTYN 269
QESVK FQ MK++G+ SV ++++L ++L+RGR MA F+ M G+ P +T+N
Sbjct: 155 FQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFN 214
Query: 270 VMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTMINGYYRFKMMEEGEQFFTEM--K 329
++ G + ++ A R ++DM+ PDVVTYNT+I+G R ++ + M K
Sbjct: 215 TLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKK 274
Query: 330 GKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGVKPNDITYSTLLPGLCDAEKMS 389
++ P V+SYTT+++GY +D+ + +F +M + G+KPN +TY+TL+ GL +A +
Sbjct: 275 ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYD 334
Query: 390 EARQILTEMVDNY--IAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYG 449
E + IL D + AP D F L+ C G LDAAM V + M+ + + ++ Y
Sbjct: 335 EIKDILIGGNDAFTTFAP-DACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYS 394
Query: 450 ILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKAET 509
+LI C +D+A L ++L EKE++L + A+AYN + +YLC +G+T +AE
Sbjct: 395 VLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL-AAAYNPMFEYLCANGKTKQAEK 454
Query: 510 FFRQLLKKGIKDEAAFNNLIRGHSKEGNPELAFEMLKIMGRRGVSRDAESYKLLIKSYLS 569
FRQL+K+G++D ++ LI GH +EG + A+E+L +M RR D E+Y+LLI L
Sbjct: 455 VFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLK 514
Query: 570 KGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQTASRVMNSMLDKGITENLDL 629
GE A L M+ S + P + F SV+ L + ++ ML+K I +N+DL
Sbjct: 515 IGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDL 574
Query: 630 VAKILEALFMRGHVEEALGRIDLLMSCNCPPDFDSLLSVLCERGKTIAALKLLDFGLERE 689
+++ LF E+A + LL + LL LCE K + A L+ F LE+
Sbjct: 575 STQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKS 634
Query: 690 CNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWSSCDDLIKSLNQEGNTKQAD 744
++ + V++ L + A+S+ +++E G + S L +L G ++
Sbjct: 635 QMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQ 694
BLAST of HG10008213 vs. TAIR 10
Match:
AT1G30290.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 216.1 bits (549), Expect = 9.9e-56
Identity = 162/693 (23.38%), Postives = 314/693 (45.31%), Query Frame = 0
Query: 60 AVPQAGESVAGNGVEQVKRRTPRGKPRNPEKLEDVICKMMANREWTTRLQNSIRSLVPQF 119
++PQ+ E VE+ + R P + +V + W + + +R+L+
Sbjct: 121 SIPQSREEAGRFDVEEDESRHP--------LVREVGRLIGLRSSWNPKHEGQMRNLLRSL 180
Query: 120 DHSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLD 179
S V VL + AL F+ W +R ++HD + ++E+L + +R +L+
Sbjct: 181 KPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVL 240
Query: 180 MPNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGR 239
M +G+ + F ++ SY +AG +++++K M+ GVE ++ + V +R R
Sbjct: 241 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 300
Query: 240 YMMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNT 299
A R+ M GI P TYN M+ G R+E A EDM ++G LPD V+Y T
Sbjct: 301 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 360
Query: 300 MINGYYRFKMMEEGEQFFTEM-KGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAA 359
++ + K + E +M K +VP ++Y T+I D+ L ++ +
Sbjct: 361 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 420
Query: 360 GVKPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDA 419
G + + + YS ++ LC +MSEA+ ++ EM+ P D + +++ C+ G++D
Sbjct: 421 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 480
Query: 420 AMHVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEA 479
A +L+ M Y L+ C+ +A ++++ + +E P S
Sbjct: 481 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN--MSEEHWWSPNSI----- 540
Query: 480 SAYNLIIQYLCNHGQTGKAETFFRQLLKKG-IKDEAAFNNLIRGHSKEGNPELAFEMLKI 539
Y++I+ L G+ +A R+++ KG N L++ ++G A + ++
Sbjct: 541 -TYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 600
Query: 540 MGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDNMIESGHHPDSALFRSVMESLFVDGR 599
+G + + ++ +I + E A + LD+M H D + +++++L GR
Sbjct: 601 CLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGR 660
Query: 600 VQTASRVMNSMLDKGITENLDLVAKILEALFMRGHVEEALGRIDLLMS-CNCPPDFDSLL 659
+ A+ +M ML KGI ++ G V++ + ++ ++S C ++ ++
Sbjct: 661 IAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVI 720
Query: 660 SVLCERGKTIAALKLLDFGLERECNIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGA 719
LC GK A LL L + + +++ L G L+AY + C++ +
Sbjct: 721 EKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLI 780
Query: 720 KDWSSCDDLIKSLNQEGNTKQAD-ILSRMVKGG 749
D C+ L K L +G +AD ++ R+V+ G
Sbjct: 781 PDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
BLAST of HG10008213 vs. TAIR 10
Match:
AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 203.0 bits (515), Expect = 8.6e-52
Identity = 124/443 (27.99%), Postives = 218/443 (49.21%), Query Frame = 0
Query: 121 HSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEILGRASKLNHARCILLDM 180
++LV + K SD + R VE FQ + T+ ++ ++ ++ + A +L M
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETG--FQPNEVTYGPVLNVMCKSGQTALAMELLRKM 256
Query: 181 PNKGVEWDEDLFVVLIDSYGKAGIVQESVKCFQKMKELGVERSVKSYDALFKVILRRGRY 240
+ ++ D + ++ID K G + + F +M+ G + + +Y+ L GR+
Sbjct: 257 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 316
Query: 241 MMAKRYFNAMLNEGIEPTCHTYNVMLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTM 300
+ M+ I P T++V++ +L A + ++M RGI P+ +TYN++
Sbjct: 317 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 376
Query: 301 INGYYRFKMMEEGEQFFTEMKGKNIVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGV 360
I+G+ + +EE Q M K P ++++ +I GY R+DDGL LF EM GV
Sbjct: 377 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 436
Query: 361 KPNDITYSTLLPGLCDAEKMSEARQILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAM 420
N +TY+TL+ G C + K+ A+++ EMV + P D + LL C +G+L+ A+
Sbjct: 437 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP-DIVSYKILLDGLCDNGELEKAL 496
Query: 421 HVLKAMIRLSIPTEAGHYGILIENCCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASA 480
+ + + + + G Y I+I C A D A L L P ++++A A
Sbjct: 497 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL--------PLKGVKLDARA 556
Query: 481 YNLIIQYLCNHGQTGKAETFFRQLLKKG-IKDEAAFNNLIRGHSKEGNPELAFEMLKIMG 540
YN++I LC KA+ FR++ ++G DE +N LIR H + + A E+++ M
Sbjct: 557 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 616
Query: 541 RRGVSRDAESYKLLIKSYLSKGE 563
G D + K++I + LS GE
Sbjct: 617 SSGFPADVSTVKMVI-NMLSSGE 627
BLAST of HG10008213 vs. TAIR 10
Match:
AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 197.6 bits (501), Expect = 3.6e-50
Identity = 148/672 (22.02%), Postives = 302/672 (44.94%), Query Frame = 0
Query: 111 SIRSLVPQFDHSLVWNVLHAAKKSDHALNFYRWVERAGLFQHDRETHLKIIEIL---GRA 170
S++S+V S V ++ ALNF W+ + ++H ++ ++ +L G
Sbjct: 80 SLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYV 139
Query: 171 SKLNHARCIL-------------LDMPNKGVEWDE----------DLFVVLIDSYGKAGI 230
+ R ++ LD+ K + DE + L++S + G+
Sbjct: 140 GVVFKIRLLMIKSCDSVGDALYVLDLCRK-MNKDERFELKYKLIIGCYNTLLNSLARFGL 199
Query: 231 VQESVKCFQKMKELGVERSVKSYDALFKVILRRGRYMMAKRYFNAMLNEGIEPTCHTYNV 290
V E + + +M E V ++ +Y+ + + G A +Y + ++ G++P TY
Sbjct: 200 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 259
Query: 291 MLWGLFLSLRLETAKRFYEDMKTRGILPDVVTYNTMINGYYRFKMMEEGEQFFTEMKGKN 350
++ G L++A + + +M +G + V Y +I+G + ++E F +MK
Sbjct: 260 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 319
Query: 351 IVPTVISYTTMIKGYVSVGRVDDGLRLFEEMKAAGVKPNDITYSTLLPGLCDAEKMSEAR 410
PTV +YT +IK R + L L +EM+ G+KPN TY+ L+ LC K +AR
Sbjct: 320 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 379
Query: 411 QILTEMVDNYIAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIEN 470
++L +M++ + P + + L++ CK G ++ A+ V++ M + Y LI+
Sbjct: 380 ELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 439
Query: 471 CCKARMYDKAVKLLDKLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKAETFFRQL 530
CK+ ++ KA+ +L+K++E++++ + YN +I C G A +
Sbjct: 440 YCKSNVH-KAMGVLNKMLERKVL--------PDVVTYNSLIDGQCRSGNFDSAYRLLSLM 499
Query: 531 LKKG-IKDEAAFNNLIRGHSKEGNPELAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEP 590
+G + D+ + ++I K E A ++ + ++GV+ + Y LI Y G+
Sbjct: 500 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 559
Query: 591 ADAKTALDNMIESGHHPDSALFRSVMESLFVDGRVQTASRVMNSMLDKGITENLDLVAKI 650
+A L+ M+ P+S F +++ L DG+++ A+ + M+ G+ + +
Sbjct: 560 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 619
Query: 651 LEALFMRGHVEEALGRIDLLMSCNCPPD---FDSLLSVLCERGKTIAALKLLDFGLEREC 710
+ L G + A R ++S PD + + + C G+ + A ++ E
Sbjct: 620 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 679
Query: 711 NIEFSSYEKVLDALLGAGKTLNAYSILCKIMEKGGAKDWSSCDDLIKSL------NQEGN 747
+ + +Y ++ G+T A+ +L ++ + G + LIK L Q+G+
Sbjct: 680 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 739
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038880029.1 | 0.0e+00 | 93.55 | pentatricopeptide repeat-containing protein At2g37230 [Benincasa hispida] | [more] |
| KAA0035127.1 | 0.0e+00 | 90.79 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ95953... | [more] |
| XP_004149878.1 | 0.0e+00 | 90.53 | pentatricopeptide repeat-containing protein At2g37230 isoform X1 [Cucumis sativu... | [more] |
| XP_008443807.2 | 0.0e+00 | 90.82 | PREDICTED: pentatricopeptide repeat-containing protein At2g37230 [Cucumis melo] | [more] |
| XP_023515807.1 | 0.0e+00 | 89.47 | pentatricopeptide repeat-containing protein At2g37230-like [Cucurbita pepo subsp... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9ZUU3 | 2.7e-292 | 67.19 | Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana OX... | [more] |
| O81908 | 2.8e-95 | 32.38 | Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidop... | [more] |
| Q9LPX2 | 1.2e-50 | 27.99 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... | [more] |
| Q9LSL9 | 5.1e-49 | 22.02 | Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX... | [more] |
| Q6NQ83 | 5.7e-48 | 28.08 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7T0L7 | 0.0e+00 | 90.79 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A0A0LTL3 | 0.0e+00 | 90.53 | PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G293020 PE... | [more] |
| A0A1S3B8Y6 | 0.0e+00 | 90.82 | pentatricopeptide repeat-containing protein At2g37230 OS=Cucumis melo OX=3656 GN... | [more] |
| A0A6J1E1L0 | 0.0e+00 | 89.21 | pentatricopeptide repeat-containing protein At2g37230-like OS=Cucurbita moschata... | [more] |
| A0A6J1JJW0 | 0.0e+00 | 89.34 | pentatricopeptide repeat-containing protein At2g37230-like OS=Cucurbita maxima O... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G37230.1 | 1.9e-293 | 67.19 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G02060.1 | 2.0e-96 | 32.38 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G30290.1 | 9.9e-56 | 23.38 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G12775.1 | 8.6e-52 | 27.99 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G65560.1 | 3.6e-50 | 22.02 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
