HG10008190 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008190
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP-dependent DNA helicase
Location	Chr10: 20634786 .. 20635382 (-)
RNA-Seq Expression	HG10008190
Synteny	HG10008190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCTCACGAGATTGTAGAGAATAGAAGTAGTAAAGTTACCAACAAGCCAAGAAACTGGGAGCAGATAAAGGTTCTGGGGCTTCATCCATCCATGTCGATGAGCGACCTTGTCAACCACATTGGACATCATATTACAGAACAAATGGCTTCTTCAAAGACACCTTTTGTTGATGATGGTTCGGAGAAATACCAAGCTATGCTGGATGACATTGCACAATACTTGCTGAGTGACAATCAATTGTCAGCAGCTTCTGATGAGGTATCACTCATGTCAAGAGTCGATTCTCTCTGCTGCCTGTTGCAGAAAGAACCTGTTCAAAGTTCCCAAACCAATGGTGAAAACTGTGTTGAAGGAGCCATCTACAAAGATGATGTTCAACTCAAGGATGCTGTGGAGTTGAGGGATGGCAGGAATATTGAAGACCATATCAAGATTCATCCCGAAAAGAAAAACGATGTTTCTGGAAGCATACAAGCCTCAGCTATGTCAAGGAAAGATTCGTATGGGGATTTGTTGTTGCATCTTCCTCGAATTGCATCGCTCCCTAAGTTCTTATTTGACATTTCAGATGGTGATGAAAGTCAAGATTAA

mRNA sequence

ATGGATGCTCACGAGATTGTAGAGAATAGAAGTAGTAAAGTTACCAACAAGCCAAGAAACTGGGAGCAGATAAAGGTTCTGGGGCTTCATCCATCCATGTCGATGAGCGACCTTGTCAACCACATTGGACATCATATTACAGAACAAATGGCTTCTTCAAAGACACCTTTTGTTGATGATGGTTCGGAGAAATACCAAGCTATGCTGGATGACATTGCACAATACTTGCTGAGTGACAATCAATTGTCAGCAGCTTCTGATGAGGTATCACTCATGTCAAGAGTCGATTCTCTCTGCTGCCTGTTGCAGAAAGAACCTGTTCAAAGTTCCCAAACCAATGGTGAAAACTGTGTTGAAGGAGCCATCTACAAAGATGATGTTCAACTCAAGGATGCTGTGGAGTTGAGGGATGGCAGGAATATTGAAGACCATATCAAGATTCATCCCGAAAAGAAAAACGATGTTTCTGGAAGCATACAAGCCTCAGCTATGTCAAGGAAAGATTCGTATGGGGATTTGTTGTTGCATCTTCCTCGAATTGCATCGCTCCCTAAGTTCTTATTTGACATTTCAGATGGTGATGAAAGTCAAGATTAA

Coding sequence (CDS)

ATGGATGCTCACGAGATTGTAGAGAATAGAAGTAGTAAAGTTACCAACAAGCCAAGAAACTGGGAGCAGATAAAGGTTCTGGGGCTTCATCCATCCATGTCGATGAGCGACCTTGTCAACCACATTGGACATCATATTACAGAACAAATGGCTTCTTCAAAGACACCTTTTGTTGATGATGGTTCGGAGAAATACCAAGCTATGCTGGATGACATTGCACAATACTTGCTGAGTGACAATCAATTGTCAGCAGCTTCTGATGAGGTATCACTCATGTCAAGAGTCGATTCTCTCTGCTGCCTGTTGCAGAAAGAACCTGTTCAAAGTTCCCAAACCAATGGTGAAAACTGTGTTGAAGGAGCCATCTACAAAGATGATGTTCAACTCAAGGATGCTGTGGAGTTGAGGGATGGCAGGAATATTGAAGACCATATCAAGATTCATCCCGAAAAGAAAAACGATGTTTCTGGAAGCATACAAGCCTCAGCTATGTCAAGGAAAGATTCGTATGGGGATTTGTTGTTGCATCTTCCTCGAATTGCATCGCTCCCTAAGTTCTTATTTGACATTTCAGATGGTGATGAAAGTCAAGATTAA

Protein sequence

MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

Homology

[Close]

BLAST of HG10008190 vs. NCBI nr
Match: XP_038879516.1 (uncharacterized protein LOC120071357 isoform X2 [Benincasa hispida])

HSP 1 Score: 341.7 bits (875), Expect = 4.4e-90
Identity = 172/198 (86.87%), Postives = 183/198 (92.42%), Query Frame = 0


Query: 1   MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDD 60
           MDAHEI ENRS+KVT KPRNWEQIKV G+HPS+SMSDLVNHIGHHITEQMAS+KTPFVD+
Sbjct: 343 MDAHEIEENRSTKVTRKPRNWEQIKVPGIHPSVSMSDLVNHIGHHITEQMASTKTPFVDN 402

Query: 61  GSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 120
           GSE+YQ+MLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG
Sbjct: 403 GSEEYQSMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 462

Query: 121 AIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRI 180
           A Y+DDV +     LRDG+NIEDHIKIHPE   +VSGSIQASAMSRKDSYGDLLLHLPRI
Sbjct: 463 ANYRDDVAM-----LRDGKNIEDHIKIHPETTQEVSGSIQASAMSRKDSYGDLLLHLPRI 522

Query: 181 ASLPKFLFDISDGDESQD 199
           ASLPK LFDISDGDE QD
Sbjct: 523 ASLPKLLFDISDGDEGQD 535

[Close]

BLAST of HG10008190 vs. NCBI nr
Match: XP_038879515.1 (uncharacterized protein LOC120071357 isoform X1 [Benincasa hispida])

HSP 1 Score: 341.7 bits (875), Expect = 4.4e-90
Identity = 172/198 (86.87%), Postives = 183/198 (92.42%), Query Frame = 0


Query: 1   MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDD 60
           MDAHEI ENRS+KVT KPRNWEQIKV G+HPS+SMSDLVNHIGHHITEQMAS+KTPFVD+
Sbjct: 356 MDAHEIEENRSTKVTRKPRNWEQIKVPGIHPSVSMSDLVNHIGHHITEQMASTKTPFVDN 415

Query: 61  GSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 120
           GSE+YQ+MLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG
Sbjct: 416 GSEEYQSMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 475

Query: 121 AIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRI 180
           A Y+DDV +     LRDG+NIEDHIKIHPE   +VSGSIQASAMSRKDSYGDLLLHLPRI
Sbjct: 476 ANYRDDVAM-----LRDGKNIEDHIKIHPETTQEVSGSIQASAMSRKDSYGDLLLHLPRI 535

Query: 181 ASLPKFLFDISDGDESQD 199
           ASLPK LFDISDGDE QD
Sbjct: 536 ASLPKLLFDISDGDEGQD 548

[Close]

BLAST of HG10008190 vs. NCBI nr
Match: XP_008443830.1 (PREDICTED: uncharacterized protein LOC103487331 isoform X1 [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 167/198 (84.34%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDD 60
           MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDD
Sbjct: 357 MDAHEIEEN-SSKVTSKPRNWEHIKVPGLHPSMSMSDLVNHIGHHITEQMASTKTPFVDD 416

Query: 61  GSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 120
           GSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCCLLQKEPVQSSQTNGEN  EG
Sbjct: 417 GSEEYQAMLDDIAQYLLSDNQLSATSDEVSLMSRVNSLCCLLQKEPVQSSQTNGENYDEG 476

Query: 121 AIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRI 180
              KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRI
Sbjct: 477 PNNKDDTQLKYTAELRDGKNIEEHINIQPTD----SGSIQASSMSRKDSYGELLLHLPRI 536

Query: 181 ASLPKFLFDISDGDESQD 199
           ASLPKFLFDISDGDE QD
Sbjct: 537 ASLPKFLFDISDGDEGQD 549

[Close]

BLAST of HG10008190 vs. NCBI nr
Match: XP_008443833.1 (PREDICTED: uncharacterized protein LOC103487331 isoform X4 [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 167/198 (84.34%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDD 60
           MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDD
Sbjct: 342 MDAHEIEEN-SSKVTSKPRNWEHIKVPGLHPSMSMSDLVNHIGHHITEQMASTKTPFVDD 401

Query: 61  GSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 120
           GSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCCLLQKEPVQSSQTNGEN  EG
Sbjct: 402 GSEEYQAMLDDIAQYLLSDNQLSATSDEVSLMSRVNSLCCLLQKEPVQSSQTNGENYDEG 461

Query: 121 AIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRI 180
              KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRI
Sbjct: 462 PNNKDDTQLKYTAELRDGKNIEEHINIQPTD----SGSIQASSMSRKDSYGELLLHLPRI 521

Query: 181 ASLPKFLFDISDGDESQD 199
           ASLPKFLFDISDGDE QD
Sbjct: 522 ASLPKFLFDISDGDEGQD 534

[Close]

BLAST of HG10008190 vs. NCBI nr
Match: XP_008443831.1 (PREDICTED: uncharacterized protein LOC103487331 isoform X2 [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 167/198 (84.34%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDD 60
           MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDD
Sbjct: 356 MDAHEIEEN-SSKVTSKPRNWEHIKVPGLHPSMSMSDLVNHIGHHITEQMASTKTPFVDD 415

Query: 61  GSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 120
           GSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCCLLQKEPVQSSQTNGEN  EG
Sbjct: 416 GSEEYQAMLDDIAQYLLSDNQLSATSDEVSLMSRVNSLCCLLQKEPVQSSQTNGENYDEG 475

Query: 121 AIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRI 180
              KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRI
Sbjct: 476 PNNKDDTQLKYTAELRDGKNIEEHINIQPTD----SGSIQASSMSRKDSYGELLLHLPRI 535

Query: 181 ASLPKFLFDISDGDESQD 199
           ASLPKFLFDISDGDE QD
Sbjct: 536 ASLPKFLFDISDGDEGQD 548

[Close]

BLAST of HG10008190 vs. ExPASy TrEMBL
Match: A0A1S3B9Q0 (uncharacterized protein LOC103487331 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103487331 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 167/198 (84.34%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDD 60
           MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDD
Sbjct: 342 MDAHEIEEN-SSKVTSKPRNWEHIKVPGLHPSMSMSDLVNHIGHHITEQMASTKTPFVDD 401

Query: 61  GSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 120
           GSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCCLLQKEPVQSSQTNGEN  EG
Sbjct: 402 GSEEYQAMLDDIAQYLLSDNQLSATSDEVSLMSRVNSLCCLLQKEPVQSSQTNGENYDEG 461

Query: 121 AIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRI 180
              KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRI
Sbjct: 462 PNNKDDTQLKYTAELRDGKNIEEHINIQPTD----SGSIQASSMSRKDSYGELLLHLPRI 521

Query: 181 ASLPKFLFDISDGDESQD 199
           ASLPKFLFDISDGDE QD
Sbjct: 522 ASLPKFLFDISDGDEGQD 534

[Close]

BLAST of HG10008190 vs. ExPASy TrEMBL
Match: A0A1S3B8H0 (uncharacterized protein LOC103487331 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487331 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 167/198 (84.34%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDD 60
           MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDD
Sbjct: 357 MDAHEIEEN-SSKVTSKPRNWEHIKVPGLHPSMSMSDLVNHIGHHITEQMASTKTPFVDD 416

Query: 61  GSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 120
           GSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCCLLQKEPVQSSQTNGEN  EG
Sbjct: 417 GSEEYQAMLDDIAQYLLSDNQLSATSDEVSLMSRVNSLCCLLQKEPVQSSQTNGENYDEG 476

Query: 121 AIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRI 180
              KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRI
Sbjct: 477 PNNKDDTQLKYTAELRDGKNIEEHINIQPTD----SGSIQASSMSRKDSYGELLLHLPRI 536

Query: 181 ASLPKFLFDISDGDESQD 199
           ASLPKFLFDISDGDE QD
Sbjct: 537 ASLPKFLFDISDGDEGQD 549

[Close]

BLAST of HG10008190 vs. ExPASy TrEMBL
Match: A0A1S3B8X8 (uncharacterized protein LOC103487331 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487331 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 167/198 (84.34%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDD 60
           MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDD
Sbjct: 356 MDAHEIEEN-SSKVTSKPRNWEHIKVPGLHPSMSMSDLVNHIGHHITEQMASTKTPFVDD 415

Query: 61  GSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 120
           GSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCCLLQKEPVQSSQTNGEN  EG
Sbjct: 416 GSEEYQAMLDDIAQYLLSDNQLSATSDEVSLMSRVNSLCCLLQKEPVQSSQTNGENYDEG 475

Query: 121 AIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRI 180
              KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRI
Sbjct: 476 PNNKDDTQLKYTAELRDGKNIEEHINIQPTD----SGSIQASSMSRKDSYGELLLHLPRI 535

Query: 181 ASLPKFLFDISDGDESQD 199
           ASLPKFLFDISDGDE QD
Sbjct: 536 ASLPKFLFDISDGDEGQD 548

[Close]

BLAST of HG10008190 vs. ExPASy TrEMBL
Match: A0A1S3B908 (uncharacterized protein LOC103487331 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103487331 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 167/198 (84.34%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDD 60
           MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDD
Sbjct: 344 MDAHEIEEN-SSKVTSKPRNWEHIKVPGLHPSMSMSDLVNHIGHHITEQMASTKTPFVDD 403

Query: 61  GSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 120
           GSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCCLLQKEPVQSSQTNGEN  EG
Sbjct: 404 GSEEYQAMLDDIAQYLLSDNQLSATSDEVSLMSRVNSLCCLLQKEPVQSSQTNGENYDEG 463

Query: 121 AIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRI 180
              KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRI
Sbjct: 464 PNNKDDTQLKYTAELRDGKNIEEHINIQPTD----SGSIQASSMSRKDSYGELLLHLPRI 523

Query: 181 ASLPKFLFDISDGDESQD 199
           ASLPKFLFDISDGDE QD
Sbjct: 524 ASLPKFLFDISDGDEGQD 536

[Close]

BLAST of HG10008190 vs. ExPASy TrEMBL
Match: A0A5D3BBH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00410 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.3e-83
Identity = 166/198 (83.84%), Postives = 174/198 (87.88%), Query Frame = 0


Query: 1   MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDD 60
           MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDD
Sbjct: 302 MDAHEIEEN-SSKVTSKPRNWEHIKVPGLHPSMSMSDLVNHIGHHITEQMASTKTPFVDD 361

Query: 61  GSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 120
           GSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCCLLQKEPVQSSQTNGEN  EG
Sbjct: 362 GSEEYQAMLDDIAQYLLSDNQLSATSDEVSLMSRVNSLCCLLQKEPVQSSQTNGENYDEG 421

Query: 121 AIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRI 180
              KDD QLK    LRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRI
Sbjct: 422 PNNKDDTQLKYTAGLRDGKNIEEHINIQPTD----SGSIQASSMSRKDSYGELLLHLPRI 481

Query: 181 ASLPKFLFDISDGDESQD 199
           ASLPKFLFDISDGDE QD
Sbjct: 482 ASLPKFLFDISDGDEGQD 494

[Close]

BLAST of HG10008190 vs. TAIR 10
Match: AT2G24100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 2.1e-18
Identity = 69/194 (35.57%), Postives = 96/194 (49.48%), Query Frame = 0


Query: 1   MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDD 60
           MDA  I     S  +     W QIK+ GLH S+SM+D +                 F+ D
Sbjct: 304 MDARAIEGVGGSIDSRNTNGWSQIKMPGLHQSISMNDFLT----------------FLSD 363

Query: 61  GSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSSQTNGENCVEG 120
            + +     +++ Q LLSDN  +  SDE S+MS+V+S C LLQ     +SQ N E     
Sbjct: 364 QACENNQEFEEMKQLLLSDNTQTDPSDEKSVMSKVNSFCNLLQS--AANSQLNIET---- 423

Query: 121 AIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRI 180
                    +  V + + R++ +  K      +  S S     MSRKDS+ DLL+HLPRI
Sbjct: 424 ------ADTERVVGVDNNRHMPEGGK---RVVDPASSSKPLQGMSRKDSFSDLLVHLPRI 466

Query: 181 ASLPKFLFDISDGD 195
            SLPKFLF+IS+ D
Sbjct: 484 TSLPKFLFNISEED 466

[Close]

BLAST of HG10008190 vs. TAIR 10
Match: AT4G30780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 5.2e-17
Identity = 70/175 (40.00%), Postives = 91/175 (52.00%), Query Frame = 0


Query: 22  EQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQ 81
           +QIKV GLH SMS+SD V      +    A    P   +  EK++ M     Q LLSDN 
Sbjct: 432 DQIKVPGLHQSMSVSDFVG-----LLSDSAGGSHP---EHMEKFEIM----KQQLLSDNI 491

Query: 82  LSAASDEVSLMSRVDSLCCLLQKEP--VQSSQTNGENCVEGAIYKDDVQLKDAVELRDGR 141
              A DE SLM RV+SL  LL K+P    +SQ N E  V        ++ +    + D  
Sbjct: 492 QFEAPDEKSLMPRVNSLFNLLYKDPNVAANSQLNTEMSV-------GLKSEPKGIVSDNN 551

Query: 142 NIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGD 195
           N  +    +  +  D + S +   M RKDS+ DLLLHLPRI SLPKFL +IS+ D
Sbjct: 552 NNNN----NNNRVLDTASSSKPQGMLRKDSFSDLLLHLPRITSLPKFLSNISEED 583

The following BLAST results are available for this feature:

BLAST of HG10008190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879516.1	4.4e-90	86.87	uncharacterized protein LOC120071357 isoform X2 [Benincasa hispida]	[more]
XP_038879515.1	4.4e-90	86.87	uncharacterized protein LOC120071357 isoform X1 [Benincasa hispida]	[more]
XP_008443830.1	2.3e-83	84.34	PREDICTED: uncharacterized protein LOC103487331 isoform X1 [Cucumis melo]	[more]
XP_008443833.1	2.3e-83	84.34	PREDICTED: uncharacterized protein LOC103487331 isoform X4 [Cucumis melo]	[more]
XP_008443831.1	2.3e-83	84.34	PREDICTED: uncharacterized protein LOC103487331 isoform X2 [Cucumis melo]	[more]

BLAST of HG10008190 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10008190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9Q0	1.1e-83	84.34	uncharacterized protein LOC103487331 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B8H0	1.1e-83	84.34	uncharacterized protein LOC103487331 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B8X8	1.1e-83	84.34	uncharacterized protein LOC103487331 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B908	1.1e-83	84.34	uncharacterized protein LOC103487331 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3BBH6	7.3e-83	83.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of HG10008190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24100.1	2.1e-18	35.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G30780.1	5.2e-17	40.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33494	OS02G0793800 PROTEIN	coord: 1..195
None	No IPR available	PANTHER	PTHR33494:SF19	ATP-DEPENDENT DNA HELICASE	coord: 1..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008190.1	HG10008190.1	mRNA