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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTAGGAGTATTCGTGTTTCAAGACAGGTCAAAATGGGAGTGCACACATCAATGTCAAGAACATGTAGATGATAAAACCCGCTCAAAGGCAAGCACTGCCAACCACAACGATGGTGTCTCCACAGGCACACAAAAGGCTTGGGCTTTGGCCATTGTCTCGATTCACATCGAGTTTATTGGAAGATAA mRNA sequence ATGTTAGGAGTATTCGTGTTTCAAGACAGGTCAAAATGGGAGTGCACACATCAATGTCAAGAACATGTAGATGATAAAACCCGCTCAAAGGCAAGCACTGCCAACCACAACGATGGTGTCTCCACAGGCACACAAAAGGCTTGGGCTTTGGCCATTGTCTCGATTCACATCGAGTTTATTGGAAGATAA Coding sequence (CDS) ATGTTAGGAGTATTCGTGTTTCAAGACAGGTCAAAATGGGAGTGCACACATCAATGTCAAGAACATGTAGATGATAAAACCCGCTCAAAGGCAAGCACTGCCAACCACAACGATGGTGTCTCCACAGGCACACAAAAGGCTTGGGCTTTGGCCATTGTCTCGATTCACATCGAGTTTATTGGAAGATAA Protein sequence MLGVFVFQDRSKWECTHQCQEHVDDKTRSKASTANHNDGVSTGTQKAWALAIVSIHIEFIGR
Homology
BLAST of HG10008088 vs. NCBI nr
Match: XP_022975619.1 (uncharacterized protein LOC111475315 [Cucurbita maxima] >XP_022975657.1 uncharacterized protein LOC111475490 [Cucurbita maxima] >XP_022975669.1 uncharacterized protein LOC111475524 [Cucurbita maxima]) HSP 1 Score: 55.1 bits (131), Expect = 2.5e-04 Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 0
Query: 6 VFQDRSKWECTHQCQEHVDDKTRSKASTANH--NDGVSTGTQKAWALAIVSIHI 58
VFQD S E T +CQEH D + R KA A+H +D VST KAWALA VSI I
Sbjct: 104 VFQDGSNGEPTGRCQEHADAEARQKAHAASHDRDDDVSTSVTKAWALAAVSIRI 157
BLAST of HG10008088 vs. ExPASy TrEMBL
Match: A0A6J1IDM8 (uncharacterized protein LOC111475315 OS=Cucurbita maxima OX=3661 GN=LOC111475490 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.2e-04 Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 0
Query: 6 VFQDRSKWECTHQCQEHVDDKTRSKASTANH--NDGVSTGTQKAWALAIVSIHI 58
VFQD S E T +CQEH D + R KA A+H +D VST KAWALA VSI I
Sbjct: 104 VFQDGSNGEPTGRCQEHADAEARQKAHAASHDRDDDVSTSVTKAWALAAVSIRI 157
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022975619.1 | 2.5e-04 | 57.41 | uncharacterized protein LOC111475315 [Cucurbita maxima] >XP_022975657.1 uncharac... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1IDM8 | 1.2e-04 | 57.41 | uncharacterized protein LOC111475315 OS=Cucurbita maxima OX=3661 GN=LOC111475490... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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