HG10008055 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008055
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	axial regulator YABBY 5-like
Location	Chr10: 19160227 .. 19163477 (-)
RNA-Seq Expression	HG10008055
Synteny	HG10008055

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCAGCTGCATCGATATTGCACCTGAACAACTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGGTATATTTATAAACATCTCTTTCTTTTTTTTTTTTTTCTTTTTTTTTGGTTAATTTTGCCTAATTTTTCTGTTTTCTAGATCTTGATGGAAAATAGGAAAATGGGTTCTTTCTTTTTTTTGGCTTTTGGGTTTCTCTAATTTCTCTAATTTCTCTATTGATGTTTCGTGTAATTTGATTTTCAATTCAGTTAGGTCTCCATTGTTTTGGACTTTTTTTTTCTTCTTTTTCTTCTTCTTCTTTTCCAGTCAAAATAAAGTCATATATACACCTGAAAATACCGATGAGGAAAAAAAAGAAAGAGAAAGAGAGAGAGAGAGATTAGTAATTTGTGTATTTTTGTTTGACAAATTTGAATTTTAGGAAAATTATTGGAATTGAAATCTGAGGAAAGAAGAGATAATGGAGTTTCAAAAGTTGAAAGAAAAAAAATAAAAATAAAAATAAGGTCTTGGATGACAAGGATGATGAAGACAAGTCATGAATAATGCCCTTTTCTTTTCTTTAAAAATGCCACTCTCTATAATCCCTCAAAACCTACCTGCTTTTACCTCAATGGGGAAATCACTTAGGAAGATCTCACTTCAAACTTCTAACCCACCAAAAAAAACCCATCTTTTTTACAACCCATTAAAGAAAAACCCTAAACAAATACACCCTTCTAGGTTTCCATCCTATTATTAAAAAAAAAAGAAAAATTTAAACCCGTAACCCATCAGTTTAAGCTTCTTAAAATTGGATCGTTTAAGAACGAATGCGATGATGATGATAATAATGATGATGATGATGATGAGCAGGTGAGTGTTCCATGCAGTAGTTTGTTTGATATTGTGACAGTCCGATGTGGGCACTGCACAAATCTGTGGTCCGTCAATATGGCTGCTGCATTTCAGTCTCTTTCTTGGCAAGATCTTCAGGTAACCCTAATTCTCCACCCAATTAATCTTTTTAATTTTACTATTTTTTTTTACAAAATTAATCAATCTGACCCAGATTCTCAAATTAATCTTTTAATTAAAGGCAAAAAAGAAAGAAAAAAAGACATAGGTAGCTTCCACAGCCGCCATAATCCCATGGTCTAACTCTTTTATCCATCAAGTTTGAACATTTTCTTTCAGGTTTTATTGAGAAATGTTAACCCTTTTTCAAATGCCTTTTTCTTTTTAGTCCTTGTTTTGCTAGATTTTGCTTTTTGGGTTTAGGGTTCTTTTAGGTTTTTGTAATTATTGTTTATTTTCTCTAGGGGGAGAGAGCTTTCAGCTATATACCTATATATCTATACCTAGGATTTTGTCATCTACTCTTCCAACACAGAAAAATCAAAAATAAAAAAAACATCTTTTTTTTTTTTTTAATTTTTTTTATGGAGACCTGAAAGTCTCTTTTGACTTTGTGTTTGGGATTGAACTGCCAATCTAGGTATTATATGCTTTTATTTCTAACTGATTCAGTCATTTCAATGTTGGAATATTTCCTTCTGAGTTCTCTTATGAAACATCATTTCTTAAAATAATAATGTACTTCCTTATCTCATGGCTTAAAGAGACTTTGTGTCACACCCATCAAACATAATTGAAAGCGCTAATTTTAAAAATAATTGTGTTAATTAATTGAGCTATACTTGAATTGACAAAAATTATTGTAGGTTCCAAATTACAATTTGTATAGTTGTAGTGGAAGTGATTTTCAAGGTGATTTTGGATCATCATCCAAATGTAACAACAATAATAAGATGGAAATTCGAGCACCCACTACAATTGCAGCAGAGGAGAGGGTTGTGAATCGACGTCAGTATATTTTCACTTTCCTTTTCTTTTTTTCTAAAATATATATTCCTATTTATTTGAAGTGTTATTCATTTACTTGGAAAAAAGTTGAAATTTTATGAGTTGTTGTTATCTTTTTTCAGCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAATCAGTTCATAAAGTGAATAACCAAAGCCTTCATAAGTGCTTTCTCTATGTCATTTCTTTCCAATTTATTCACTAACATAATTGTAATGAGTATCAATTTAGGAGTAATTGTCAAGTGTATAATAACATTTTAAAAAAATTACAAATATAACAAAGTCTATCACTGATAGACTGACCATAAAAATCTATTACCGATAAAATTCTATCACTATAGACTTTGCTATATCTGCGATTTTTTTTAAATGTTGCTAGATATGTTAATACTTTGAATTTGATTGCTATATTTGCAACTGTTCCTTATATTAATTGGTTCATTATATCTTTATAGTTTTTAATTAGTATAAGTTAGGTCTCGTTTGATAATCGAGAATTATGCTTTGTTTTTGTACAATTTTCTTATAGTTCAATCCTAAAAAGTATATAGTGTTTGTAAATTTAATTTTTGAAAAAATAGAAATAAAAATTAAATAGTGATAATAACGAAACCTTATTTTAATGAATTTAATTTCATTATGATATTGTTACAGAGAGGAAATTCAAAGGATCAAGGCAAGTAATCCTGAGATTAGCCACAGGGAAGCTTTCAGTACGGCAGCCAAAAACGTAAGTTTAAGAAAAAATTGATGATATAATGATAAATTTTGCATAATAATAATAATAATGTCGATGAATCTTAATTTTCTTCATAATAAATTTGAATTTTGATTGGTTAATTTGATCAGTGGGCACACTTTCCTCGTATTCACTTTGGTCTGATGTTGGAAACCAACAATCAAGTGAAGCTAGATGATGTAAGTACTCTTAATTATGCTCTTATTAATTAATGTAACATGTCACCTATAATTAAACTCAATCTAATGAAGAAAAAAAAAATCTTAAATTCAACTAATAATGTCCATGTATAATGAAACCCTAAACTTTCAATTTTCTTTATGAATTTTAAAATTTTCAAATATTTAAGGACTAAATATGAAAATTTGAAATTAGTTGAGGGACCAAATAGATAAAAACATCAAAATTGAGAGACTTAAACTTGTAATTTAACAAAAATATATATTTATGATCACTAATCTAAAAGTTAGGAACTTTTGAATTTTTGTTGCTGTATTAGTTGAATTTAAATCAAACTAAATATGCATTTCATATTGTTTAATCTTTTTTTTTTTTTTTTTTTTTTTTTTCAGGGTTCTGAGCGTTTAATGACAAGGGCTGCACTATTAAACAAATGA

mRNA sequence

ATGGCGGCCAGCTGCATCGATATTGCACCTGAACAACTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGTCCGATGTGGGCACTGCACAAATCTGTGGTCCGTCAATATGGCTGCTGCATTTCAGTCTCTTTCTTGGCAAGATCTTCAGAGAGGAAATTCAAAGGATCAAGGCAAGTAATCCTGAGATTAGCCACAGGGAAGCTTTCAGTACGGCAGCCAAAAACTGGGCACACTTTCCTCGTATTCACTTTGGTCTGATGTTGGAAACCAACAATCAAGTGAAGCTAGATGATGGTTCTGAGCGTTTAATGACAAGGGCTGCACTATTAAACAAATGA

Coding sequence (CDS)

ATGGCGGCCAGCTGCATCGATATTGCACCTGAACAACTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGTCCGATGTGGGCACTGCACAAATCTGTGGTCCGTCAATATGGCTGCTGCATTTCAGTCTCTTTCTTGGCAAGATCTTCAGAGAGGAAATTCAAAGGATCAAGGCAAGTAATCCTGAGATTAGCCACAGGGAAGCTTTCAGTACGGCAGCCAAAAACTGGGCACACTTTCCTCGTATTCACTTTGGTCTGATGTTGGAAACCAACAATCAAGTGAAGCTAGATGATGGTTCTGAGCGTTTAATGACAAGGGCTGCACTATTAAACAAATGA

Protein sequence

MAASCIDIAPEQLCYIPCNFCNIVLASDVGTAQICGPSIWLLHFSLFLGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK

Homology

[Close]

BLAST of HG10008055 vs. NCBI nr
Match: XP_038878725.1 (axial regulator YABBY 5-like [Benincasa hispida])

HSP 1 Score: 154.8 bits (390), Expect = 4.4e-34
Identity = 95/189 (50.26%), Postives = 103/189 (54.50%), Query Frame = 0


Query: 1   MAASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWL---------- 60
           MAASCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W           
Sbjct: 1   MAASCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSL 60

Query: 61  -----------LHFSLFLG----------------------------------------- 116
                      L+ S F G                                         
Sbjct: 61  SWQDLQVPNYNLYGSDFQGDFGSTSKCNNNNKMEIRAPTTIPTEERVVNRPPEKRQRVPS 120

[Close]

BLAST of HG10008055 vs. NCBI nr
Match: XP_004150030.1 (axial regulator YABBY 5-like [Cucumis sativus] >KAE8653111.1 hypothetical protein Csa_019794 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 4.1e-32
Identity = 89/193 (46.11%), Postives = 102/193 (52.85%), Query Frame = 0


Query: 1   MAASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLH-------- 60
           MA +C+DIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W ++        
Sbjct: 1   MATTCLDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFHSL 60

Query: 61  ---------FSLF----------------------------------------------- 116
                    ++L+                                               
Sbjct: 61  SWQDVQVPSYNLYGCNGADFQGDFGSSSKCNNNVNKMEIRVPTTIPAEERVVNRPPEKRQ 120

[Close]

BLAST of HG10008055 vs. NCBI nr
Match: KAG7021777.1 (Axial regulator YABBY 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145.6 bits (366), Expect = 2.7e-31
Identity = 85/167 (50.90%), Postives = 99/167 (59.28%), Query Frame = 0


Query: 3   ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL----------- 62
           +SCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W +           
Sbjct: 2   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  ------HFSLF--LGKIFR--------------------------EEIQRIKASNPEISH 116
                 +++L+   G  F+                           EI+RIKA NPEISH
Sbjct: 62  QDVQVPNYNLYTSCGPDFQGDFGSSSKCDNNKMQIRDSATIAAEEREIRRIKAKNPEISH 121

[Close]

BLAST of HG10008055 vs. NCBI nr
Match: KAG6587892.1 (Axial regulator YABBY 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141.0 bits (354), Expect = 6.6e-30
Identity = 84/189 (44.44%), Postives = 99/189 (52.38%), Query Frame = 0


Query: 3   ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL----------- 62
           +SCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W +           
Sbjct: 2   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  ------HFSLF------------------------------------------------- 116
                 +++L+                                                 
Sbjct: 62  QDVQVPNYNLYTSCGPDFQGDFGSSSKCDNNKMQIRDSATIAAEERVVNRPPEKRQRVPS 121

[Close]

BLAST of HG10008055 vs. NCBI nr
Match: XP_022933458.1 (axial regulator YABBY 5-like [Cucurbita moschata] >XP_023529551.1 axial regulator YABBY 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.0 bits (354), Expect = 6.6e-30
Identity = 84/189 (44.44%), Postives = 99/189 (52.38%), Query Frame = 0


Query: 3   ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL----------- 62
           +SCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W +           
Sbjct: 2   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  ------HFSLF------------------------------------------------- 116
                 +++L+                                                 
Sbjct: 62  QDVQVPNYNLYTSSGPDFQGDFGSSSKCDNNKMQIRDSATIAAEERVVNRPPEKRQRVPS 121

[Close]

BLAST of HG10008055 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 7.5e-21
Identity = 60/158 (37.97%), Postives = 76/158 (48.10%), Query Frame = 0


Query: 8   IAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL---------- 67
           +A EQLCYIPCNFCNI+LA +V  + +       CG   ++W ++ +  L          
Sbjct: 6   MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQA 65

Query: 68  -----------------------------------------------GKIFREEIQRIKA 100
                                                           +  +EEIQRIKA
Sbjct: 66  TNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKA 125

[Close]

BLAST of HG10008055 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-15
Identity = 39/54 (72.22%), Postives = 43/54 (79.63%), Query Frame = 0


Query: 50  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGS 104
           +  +EEIQRIKA NPEISHREAFSTAAKNWAHFP IHFGL L+ N + K  D S
Sbjct: 121 RFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLDQS 174

[Close]

BLAST of HG10008055 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 50  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLET--NNQVKLDDGSERLM 109
           +  ++EIQRIKA NP+ISHREAFS AAKNWAHFP IHFGLM +       K  DGSE ++
Sbjct: 173 RFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQGFKKTFKPQDGSEDIL 232

Query: 110 TRAAL 113
            + +L
Sbjct: 233 LKDSL 237

[Close]

BLAST of HG10008055 vs. ExPASy Swiss-Prot
Match: Q6H668 (Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 50  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLET--NNQVKLDDGSERLM 109
           +  ++EIQRIKA NP+ISHREAFS AAKNWAHFP IHFGLM +       K  DGSE ++
Sbjct: 173 RFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQGFKKTFKPQDGSEDIL 232

Query: 110 TRAAL 113
            + +L
Sbjct: 233 LKDSL 237

[Close]

BLAST of HG10008055 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.2e-14
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 50  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLE----TNNQVKLDDGSER 109
           +  +EEIQRIKA NP+ISHREAFS AAKNWAHFP IHFGLM +        V+  +G + 
Sbjct: 162 RFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDG 221

[Close]

BLAST of HG10008055 vs. ExPASy TrEMBL
Match: A0A6J1F4T3 (axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111440865 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.2e-30
Identity = 84/189 (44.44%), Postives = 99/189 (52.38%), Query Frame = 0


Query: 3   ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL----------- 62
           +SCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W +           
Sbjct: 2   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  ------HFSLF------------------------------------------------- 116
                 +++L+                                                 
Sbjct: 62  QDVQVPNYNLYTSSGPDFQGDFGSSSKCDNNKMQIRDSATIAAEERVVNRPPEKRQRVPS 121

[Close]

BLAST of HG10008055 vs. ExPASy TrEMBL
Match: A0A6J1KTI6 (axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111497478 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.1e-30
Identity = 84/190 (44.21%), Postives = 98/190 (51.58%), Query Frame = 0


Query: 3   ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL----------- 62
           +SCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W +           
Sbjct: 2   SSCIDIAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  ------HFSLF------------------------------------------------- 116
                 +++L+                                                 
Sbjct: 62  QDVQVPNYNLYTSSGPDFQGDFGSSSKCDNNNKMQIRDSTTIAAEERVVNRPPEKRQRVP 121

[Close]

BLAST of HG10008055 vs. ExPASy TrEMBL
Match: A0A6J0ZN21 (axial regulator YABBY 5-like isoform X2 OS=Herrania umbratica OX=108875 GN=LOC110410486 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.0e-29
Identity = 80/176 (45.45%), Postives = 95/176 (53.98%), Query Frame = 0


Query: 3   ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL----- 62
           +SCID+APEQLCYIPCNFCNIVLA  V  + +       CG   ++W ++ +        
Sbjct: 2   SSCIDVAPEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  ------------------------------------------------GKIFREEIQRIK 116
                                                            +  +EEIQRIK
Sbjct: 62  QDVQDYRTELGSSSKCNKLSMRAPANNVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIK 121

[Close]

BLAST of HG10008055 vs. ExPASy TrEMBL
Match: A0A6J0ZNM9 (axial regulator YABBY 5-like isoform X1 OS=Herrania umbratica OX=108875 GN=LOC110410486 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.9e-28
Identity = 80/183 (43.72%), Postives = 95/183 (51.91%), Query Frame = 0


Query: 3   ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL----- 62
           +SCID+APEQLCYIPCNFCNIVLA  V  + +       CG   ++W ++ +        
Sbjct: 2   SSCIDVAPEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  -------------------------------------------------------GKIFR 116
                                                                   +  +
Sbjct: 62  QDVQAPNYATQDYRTELGSSSKCNKLSMRAPANNVTEERVVNRPPEKRQRVPSAYNQFIK 121

[Close]

BLAST of HG10008055 vs. ExPASy TrEMBL
Match: A0A061GNW0 (Plant-specific transcription factor YABBY family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_038105 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.9e-28
Identity = 80/183 (43.72%), Postives = 95/183 (51.91%), Query Frame = 0


Query: 3   ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL----- 62
           +SCID+APEQLCYIPCNFCNIVLA  V  + +       CG   ++W ++ +        
Sbjct: 2   SSCIDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSW 61

Query: 63  -------------------------------------------------------GKIFR 116
                                                                   +  +
Sbjct: 62  QDVQAPNYATQDYRTELGSSSKCNKLSMRTPANNVTEERVVNRPPEKRPRVPSAYNQFIK 121

[Close]

BLAST of HG10008055 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-22
Identity = 60/158 (37.97%), Postives = 76/158 (48.10%), Query Frame = 0


Query: 8   IAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL---------- 67
           +A EQLCYIPCNFCNI+LA +V  + +       CG   ++W ++ +  L          
Sbjct: 6   MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQA 65

Query: 68  -----------------------------------------------GKIFREEIQRIKA 100
                                                           +  +EEIQRIKA
Sbjct: 66  TNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKA 125

[Close]

BLAST of HG10008055 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-22
Identity = 60/158 (37.97%), Postives = 76/158 (48.10%), Query Frame = 0


Query: 8   IAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL---------- 67
           +A EQLCYIPCNFCNI+LA +V  + +       CG   ++W ++ +  L          
Sbjct: 6   MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQA 65

Query: 68  -----------------------------------------------GKIFREEIQRIKA 100
                                                           +  +EEIQRIKA
Sbjct: 66  TNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKA 125

[Close]

BLAST of HG10008055 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-16
Identity = 39/54 (72.22%), Postives = 43/54 (79.63%), Query Frame = 0


Query: 50  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGS 104
           +  +EEIQRIKA NPEISHREAFSTAAKNWAHFP IHFGL L+ N + K  D S
Sbjct: 121 RFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLDQS 174

[Close]

BLAST of HG10008055 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 78.6 bits (192), Expect = 3.7e-15
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 50  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLE----TNNQVKLDDGSER 109
           +  +EEIQRIKA NP+ISHREAFS AAKNWAHFP IHFGLM +        V+  +G + 
Sbjct: 162 RFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDG 221

[Close]

BLAST of HG10008055 vs. TAIR 10
Match: AT4G00180.2 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 78.6 bits (192), Expect = 3.7e-15
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 50  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLE----TNNQVKLDDGSER 109
           +  +EEIQRIKA NP+ISHREAFS AAKNWAHFP IHFGLM +        V+  +G + 
Sbjct: 131 RFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDG 190

The following BLAST results are available for this feature:

BLAST of HG10008055 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878725.1	4.4e-34	50.26	axial regulator YABBY 5-like [Benincasa hispida]	[more]
XP_004150030.1	4.1e-32	46.11	axial regulator YABBY 5-like [Cucumis sativus] >KAE8653111.1 hypothetical protei...	[more]
KAG7021777.1	2.7e-31	50.90	Axial regulator YABBY 5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6587892.1	6.6e-30	44.44	Axial regulator YABBY 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022933458.1	6.6e-30	44.44	axial regulator YABBY 5-like [Cucurbita moschata] >XP_023529551.1 axial regulato...	[more]

BLAST of HG10008055 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW46	7.5e-21	37.97	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]
Q9XFB0	2.8e-15	72.22	Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV...	[more]
A2X7Q3	1.4e-14	58.46	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]
Q6H668	1.4e-14	58.46	Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1	[more]
Q9XFB1	5.2e-14	57.81	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]

BLAST of HG10008055 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4T3	3.2e-30	44.44	axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111440865 PE=3 ...	[more]
A0A6J1KTI6	4.1e-30	44.21	axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111497478 PE=3 SV...	[more]
A0A6J0ZN21	6.0e-29	45.45	axial regulator YABBY 5-like isoform X2 OS=Herrania umbratica OX=108875 GN=LOC11...	[more]
A0A6J0ZNM9	3.9e-28	43.72	axial regulator YABBY 5-like isoform X1 OS=Herrania umbratica OX=108875 GN=LOC11...	[more]
A0A061GNW0	3.9e-28	43.72	Plant-specific transcription factor YABBY family protein isoform 1 OS=Theobroma ...	[more]

BLAST of HG10008055 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26580.1	5.4e-22	37.97	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	5.4e-22	37.97	plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	2.0e-16	72.22	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	3.7e-15	57.81	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.2	3.7e-15	57.81	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 51..89 e-value: 4.2E-22 score: 79.5
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 3..30
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 51..106
None	No IPR available	PANTHER	PTHR31675:SF6	AXIAL REGULATOR YABBY 5	coord: 3..30 coord: 51..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008055.1	HG10008055.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development