
HG10008046 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCGATGATGAACTCACAAGGAATGGCTCTGGCTACAGCCATGGCTGCCGTCTCTGGCACTGTGATTCTTCTCTCTTTTTGCATCCAAAAATCTATTCCAATTCACCAATTCTCAACTCCAACTCTCCGCTCTTGTATTTCCTCTGGTACTTATTCTAATTTCTCCTTTAATTTTCTTTTTTTTTTAAACTCCTAAACTTAAATTTGTTTCTGTAATTGATTCCTTTTTCAGAGACCAAGAAGAAAAAGAAGAAACAGAATCAGAAAAAAAGGGTTCACTTTGCAAAAGACGTTGTCGATCCAATTGGGAACGGCGAGGATTTTCGAAGACAACACGAAATCGCTTGGAACAACAATAATTATTCCACCGCCTCTTCGCCGTCGCAAAAGCCCCCTTCCGTCACCGCCGCCGCTGCCGCCGACCCAGGAATGCCGGCAAACAGAGTGGCACTCTACAACGGGATTTTGAGAGATCGTGTTGTTCATCGATACACTTACTCTAGTTGA ATGTCTTCGATGATGAACTCACAAGGAATGGCTCTGGCTACAGCCATGGCTGCCGTCTCTGGCACTGTGATTCTTCTCTCTTTTTGCATCCAAAAATCTATTCCAATTCACCAATTCTCAACTCCAACTCTCCGCTCTTGTATTTCCTCTGAGACCAAGAAGAAAAAGAAGAAACAGAATCAGAAAAAAAGGGTTCACTTTGCAAAAGACGTTGTCGATCCAATTGGGAACGGCGAGGATTTTCGAAGACAACACGAAATCGCTTGGAACAACAATAATTATTCCACCGCCTCTTCGCCGTCGCAAAAGCCCCCTTCCGTCACCGCCGCCGCTGCCGCCGACCCAGGAATGCCGGCAAACAGAGTGGCACTCTACAACGGGATTTTGAGAGATCGTGTTGTTCATCGATACACTTACTCTAGTTGA ATGTCTTCGATGATGAACTCACAAGGAATGGCTCTGGCTACAGCCATGGCTGCCGTCTCTGGCACTGTGATTCTTCTCTCTTTTTGCATCCAAAAATCTATTCCAATTCACCAATTCTCAACTCCAACTCTCCGCTCTTGTATTTCCTCTGAGACCAAGAAGAAAAAGAAGAAACAGAATCAGAAAAAAAGGGTTCACTTTGCAAAAGACGTTGTCGATCCAATTGGGAACGGCGAGGATTTTCGAAGACAACACGAAATCGCTTGGAACAACAATAATTATTCCACCGCCTCTTCGCCGTCGCAAAAGCCCCCTTCCGTCACCGCCGCCGCTGCCGCCGACCCAGGAATGCCGGCAAACAGAGTGGCACTCTACAACGGGATTTTGAGAGATCGTGTTGTTCATCGATACACTTACTCTAGTTGA MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASSPSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYSS Homology
BLAST of HG10008046 vs. NCBI nr
Match: XP_038879742.1 (uncharacterized protein LOC120071499 [Benincasa hispida]) HSP 1 Score: 218.8 bits (556), Expect = 3.0e-53 Identity = 117/140 (83.57%), Postives = 124/140 (88.57%), Query Frame = 0
BLAST of HG10008046 vs. NCBI nr
Match: XP_004150585.1 (uncharacterized protein LOC101222988 [Cucumis sativus]) HSP 1 Score: 213.8 bits (543), Expect = 9.8e-52 Identity = 119/141 (84.40%), Postives = 128/141 (90.78%), Query Frame = 0
BLAST of HG10008046 vs. NCBI nr
Match: KAE8653101.1 (hypothetical protein Csa_019555 [Cucumis sativus]) HSP 1 Score: 213.8 bits (543), Expect = 9.8e-52 Identity = 119/141 (84.40%), Postives = 128/141 (90.78%), Query Frame = 0
BLAST of HG10008046 vs. NCBI nr
Match: XP_008443997.1 (PREDICTED: uncharacterized protein LOC103487448 [Cucumis melo] >KAA0050175.1 uncharacterized protein E6C27_scaffold675G002080 [Cucumis melo var. makuwa] >TYK06428.1 uncharacterized protein E5676_scaffold163G001310 [Cucumis melo var. makuwa]) HSP 1 Score: 213.4 bits (542), Expect = 1.3e-51 Identity = 119/141 (84.40%), Postives = 126/141 (89.36%), Query Frame = 0
BLAST of HG10008046 vs. NCBI nr
Match: XP_022933375.1 (uncharacterized protein LOC111440802 [Cucurbita moschata]) HSP 1 Score: 185.3 bits (469), Expect = 3.7e-43 Identity = 111/145 (76.55%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of HG10008046 vs. ExPASy TrEMBL
Match: A0A0A0LWV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G342430 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 4.7e-52 Identity = 119/141 (84.40%), Postives = 128/141 (90.78%), Query Frame = 0
BLAST of HG10008046 vs. ExPASy TrEMBL
Match: A0A5A7U994 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001310 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.2e-52 Identity = 119/141 (84.40%), Postives = 126/141 (89.36%), Query Frame = 0
BLAST of HG10008046 vs. ExPASy TrEMBL
Match: A0A1S3B9B6 (uncharacterized protein LOC103487448 OS=Cucumis melo OX=3656 GN=LOC103487448 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.2e-52 Identity = 119/141 (84.40%), Postives = 126/141 (89.36%), Query Frame = 0
BLAST of HG10008046 vs. ExPASy TrEMBL
Match: A0A6J1F4Q3 (uncharacterized protein LOC111440802 OS=Cucurbita moschata OX=3662 GN=LOC111440802 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.8e-43 Identity = 111/145 (76.55%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of HG10008046 vs. ExPASy TrEMBL
Match: A0A6J1I8J7 (uncharacterized protein LOC111470637 OS=Cucurbita maxima OX=3661 GN=LOC111470637 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 4.0e-43 Identity = 110/145 (75.86%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of HG10008046 vs. TAIR 10
Match: AT1G52565.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 5.2e-11 Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of HG10008046 vs. TAIR 10
Match: AT3G15760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10 Identity = 56/137 (40.88%), Postives = 72/137 (52.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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