Homology
BLAST of HG10008034 vs. NCBI nr
Match:
XP_038878735.1 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial isoform X1 [Benincasa hispida])
HSP 1 Score: 1494.6 bits (3868), Expect = 0.0e+00
Identity = 736/786 (93.64%), Postives = 756/786 (96.18%), Query Frame = 0
Query: 1 MLTRHLNFKSFHVKSNQRLPSFNFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDEAI 60
MLTRHLNFKSFHVKSNQR PSF FFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRD A
Sbjct: 1 MLTRHLNFKSFHVKSNQRFPSFKFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDGAF 60
Query: 61 QSLRFFKKQIRWGLDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLM 120
QSLRFFKKQIRW LDG+ DE TLALALKACCGLPKLGRQIHGFVISSG VSHITVSNSLM
Sbjct: 61 QSLRFFKKQIRWSLDGSTDEFTLALALKACCGLPKLGRQIHGFVISSGFVSHITVSNSLM 120
Query: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
NMYCKSGQLE+AFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT
Sbjct: 121 NMYCKSGQLEKAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
Query: 181 TTLAFCLDGEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSR 240
T LAFCLDGEDFLFGWQLHTLALKCG KGDVFVGNALITMYSRWEHLVDARQVFDEM SR
Sbjct: 181 TALAFCLDGEDFLFGWQLHTLALKCGLKGDVFVGNALITMYSRWEHLVDARQVFDEMQSR 240
Query: 241 DRVSWSAMITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
DRVSWSAM+TGYAQEG HGLEAI +F+QMVREGVKFDNVAITGALSVCGHERNLELGKQI
Sbjct: 241 DRVSWSAMVTGYAQEGDHGLEAILLFIQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
Query: 301 HCLTVKTGYETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVS 360
HCLTVKTGYETHTSVGNVLIS YSKCEIIEDAKA F+LI DRNVISWTTM+SLYEE AVS
Sbjct: 301 HCLTVKTGYETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVS 360
Query: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYA 420
LFNKMRLDGVYPNDVTFIGLLHAITIR MVEQGL+VHGLCIKADFVSEL +GNSLITMYA
Sbjct: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELGIGNSLITMYA 420
Query: 421 KFESIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSV 480
KFES+QDASRVFMELPYREIISWNALISGYAQN LCQEALETFL AIMESKPNEYTFGSV
Sbjct: 421 KFESMQDASRVFMELPYREIISWNALISGYAQNTLCQEALETFLCAIMESKPNEYTFGSV 480
Query: 481 LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSER 540
LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETS+R
Sbjct: 481 LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSKR 540
Query: 541 SQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFF 600
SQFAWTALIS YAQHGDYD VMKLFEEMEKEKIKPDAVIFLSVL ACSRNRMVDMGRRFF
Sbjct: 541 SQFAWTALISGYAQHGDYDSVMKLFEEMEKEKIKPDAVIFLSVLVACSRNRMVDMGRRFF 600
Query: 601 DMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGN 660
DMMIKDHMIEPAGEHYSCMVD+LGRAGRLE+AEEMLARIPG PGISALQSLLGACRIHGN
Sbjct: 601 DMMIKDHMIEPAGEHYSCMVDLLGRAGRLEEAEEMLARIPGEPGISALQSLLGACRIHGN 660
Query: 661 LEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
+EMAERMANALMK++P+ESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD
Sbjct: 661 VEMAERMANALMKKKPLESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
Query: 721 VGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMKFQKDRERESQTQVIDELTVTD 780
VGNFGASNLYLHGFSSGDVSHPQS EICRMAEYMGAEMKFQKDRERE QT VID+L V+D
Sbjct: 721 VGNFGASNLYLHGFSSGDVSHPQSEEICRMAEYMGAEMKFQKDRERERQTHVIDQLIVSD 780
Query: 781 LFVLDG 787
L +LDG
Sbjct: 781 LVLLDG 786
BLAST of HG10008034 vs. NCBI nr
Match:
XP_022927123.1 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Cucurbita moschata] >KAG6587926.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1426.8 bits (3692), Expect = 0.0e+00
Identity = 699/786 (88.93%), Postives = 743/786 (94.53%), Query Frame = 0
Query: 1 MLTRHLNFKSFHVKSNQRLPSFNFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDEAI 60
MLTRHLNFKSFHVKS QRLPSFNFFRSFQHD+NLFDQSPPPNAASTNRVLLNYLHR+EA
Sbjct: 1 MLTRHLNFKSFHVKSKQRLPSFNFFRSFQHDHNLFDQSPPPNAASTNRVLLNYLHRNEAF 60
Query: 61 QSLRFFKKQIRWGLDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLM 120
Q+LR FKK IRWGLDGNAD TLALALKACCG+PKLGRQIHGFVISSGLVS+I+VSNSLM
Sbjct: 61 QALRLFKKHIRWGLDGNADGFTLALALKACCGVPKLGRQIHGFVISSGLVSNISVSNSLM 120
Query: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSE+ALSFA MNLNGV+FDPVTYT
Sbjct: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSESALSFAAWMNLNGVRFDPVTYT 180
Query: 181 TTLAFCLDGEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSR 240
T LAFCLDGEDF+FGWQLHTL LKCGF+ D+FVGNALITMYSRWEHLVDARQVFDEM SR
Sbjct: 181 TALAFCLDGEDFIFGWQLHTLVLKCGFQCDIFVGNALITMYSRWEHLVDARQVFDEMRSR 240
Query: 241 DRVSWSAMITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
DRVSWSAMITGYAQEG HGLEAI VF+QMVREGVKFDNVAITGA+SVCGHERNLELGKQI
Sbjct: 241 DRVSWSAMITGYAQEGDHGLEAILVFIQMVREGVKFDNVAITGAVSVCGHERNLELGKQI 300
Query: 301 HCLTVKTGYETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVS 360
HCLTVK G+ETHTSVGNVLIS YSKCE+I+DAK+ F++I DRNVISWTTM+SLYEEDAVS
Sbjct: 301 HCLTVKIGFETHTSVGNVLISTYSKCEVIDDAKSVFEIIDDRNVISWTTMISLYEEDAVS 360
Query: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYA 420
LFN+MRLDGVYPNDVTFIGLLHAIT+R MVEQGL+VHGLCIKADFV+EL VGNSLITMYA
Sbjct: 361 LFNEMRLDGVYPNDVTFIGLLHAITMRNMVEQGLMVHGLCIKADFVTELGVGNSLITMYA 420
Query: 421 KFESIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSV 480
KFES+QDASRVFMELPYREIISWNALISGYAQN LCQEALETFL AIMESKPNEYTFGSV
Sbjct: 421 KFESMQDASRVFMELPYREIISWNALISGYAQNGLCQEALETFLCAIMESKPNEYTFGSV 480
Query: 481 LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSER 540
LNAIS GE IS+KHGQRCHSHLIKVGLN PIISGALLDMYAKRGSIQESQRVFNE S+R
Sbjct: 481 LNAISGGEDISLKHGQRCHSHLIKVGLNSGPIISGALLDMYAKRGSIQESQRVFNEASKR 540
Query: 541 SQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFF 600
SQFAWTALIS YAQHGDYD VMKLFEEM+KEKI PDAVIFLSVL ACSRNRMVDMGR+FF
Sbjct: 541 SQFAWTALISGYAQHGDYDTVMKLFEEMKKEKINPDAVIFLSVLAACSRNRMVDMGRQFF 600
Query: 601 DMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGN 660
+MMI DHMIEP EHYSCMVDMLGRAG+LE+A+EMLARIPGGPGISALQSLLGACRIHGN
Sbjct: 601 NMMINDHMIEPEAEHYSCMVDMLGRAGQLEEAQEMLARIPGGPGISALQSLLGACRIHGN 660
Query: 661 LEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
++MAERMA+ALMK EP+ESGSYVLMSNLYAQKGDWEKVAE+RKGM+E+GVKKEIGFSWVD
Sbjct: 661 VDMAERMADALMKSEPLESGSYVLMSNLYAQKGDWEKVAEVRKGMKEKGVKKEIGFSWVD 720
Query: 721 VGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMKFQKDRERESQTQVIDELTVTD 780
VGNFGAS LYLHGFSSGDVSHPQS EICRMA+YMGAEMKF KDRER+ QT +ID L +TD
Sbjct: 721 VGNFGAS-LYLHGFSSGDVSHPQSEEICRMAQYMGAEMKFLKDRERQRQTHMIDGLPLTD 780
Query: 781 LFVLDG 787
LFV DG
Sbjct: 781 LFVFDG 785
BLAST of HG10008034 vs. NCBI nr
Match:
XP_038878737.1 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial isoform X2 [Benincasa hispida])
HSP 1 Score: 1425.2 bits (3688), Expect = 0.0e+00
Identity = 710/786 (90.33%), Postives = 730/786 (92.88%), Query Frame = 0
Query: 1 MLTRHLNFKSFHVKSNQRLPSFNFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDEAI 60
MLTRHLNFKSFHVKSNQR PSF FFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRD A
Sbjct: 1 MLTRHLNFKSFHVKSNQRFPSFKFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDGAF 60
Query: 61 QSLRFFKKQIRWGLDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLM 120
QSLRFFKKQIRW LDG+ DE TLALALKACCGLPKLGRQIHGFVISSG VSHITVSNSLM
Sbjct: 61 QSLRFFKKQIRWSLDGSTDEFTLALALKACCGLPKLGRQIHGFVISSGFVSHITVSNSLM 120
Query: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
NMYCKSGQLE+AFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT
Sbjct: 121 NMYCKSGQLEKAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
Query: 181 TTLAFCLDGEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSR 240
T LAFCLDGEDFLFGWQLHTLALKCG KGDVFVGNALITMYSRWEHLVDARQVFDEM SR
Sbjct: 181 TALAFCLDGEDFLFGWQLHTLALKCGLKGDVFVGNALITMYSRWEHLVDARQVFDEMQSR 240
Query: 241 DRVSWSAMITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
DRVSWSAM+TGYAQEG HGLEAI +F+QMVREGVKFDNVAITGALSVCGHERNLELGKQI
Sbjct: 241 DRVSWSAMVTGYAQEGDHGLEAILLFIQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
Query: 301 HCLTVKTGYETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVS 360
HCLTVKTGYETHTSVGNVLIS YSKCEIIEDAKA F+LI DRNVISWTTM+SLYEE AVS
Sbjct: 301 HCLTVKTGYETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVS 360
Query: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYA 420
LFNKMRLDGVYPNDVTFIGLLHAITIR MVEQGL+VHGLCIKADFVSEL +GNSLITMYA
Sbjct: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELGIGNSLITMYA 420
Query: 421 KFESIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSV 480
KFES+QDASRVFMELPYREIISWNALISGYAQN LCQEALETFL AIMESKPNEYTFGSV
Sbjct: 421 KFESMQDASRVFMELPYREIISWNALISGYAQNTLCQEALETFLCAIMESKPNEYTFGSV 480
Query: 481 LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSER 540
LNAISAGE GALLDMYAKRGSIQESQRVFNETS+R
Sbjct: 481 LNAISAGE--------------------------GALLDMYAKRGSIQESQRVFNETSKR 540
Query: 541 SQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFF 600
SQFAWTALIS YAQHGDYD VMKLFEEMEKEKIKPDAVIFLSVL ACSRNRMVDMGRRFF
Sbjct: 541 SQFAWTALISGYAQHGDYDSVMKLFEEMEKEKIKPDAVIFLSVLVACSRNRMVDMGRRFF 600
Query: 601 DMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGN 660
DMMIKDHMIEPAGEHYSCMVD+LGRAGRLE+AEEMLARIPG PGISALQSLLGACRIHGN
Sbjct: 601 DMMIKDHMIEPAGEHYSCMVDLLGRAGRLEEAEEMLARIPGEPGISALQSLLGACRIHGN 660
Query: 661 LEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
+EMAERMANALMK++P+ESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD
Sbjct: 661 VEMAERMANALMKKKPLESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
Query: 721 VGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMKFQKDRERESQTQVIDELTVTD 780
VGNFGASNLYLHGFSSGDVSHPQS EICRMAEYMGAEMKFQKDRERE QT VID+L V+D
Sbjct: 721 VGNFGASNLYLHGFSSGDVSHPQSEEICRMAEYMGAEMKFQKDRERERQTHVIDQLIVSD 760
Query: 781 LFVLDG 787
L +LDG
Sbjct: 781 LVLLDG 760
BLAST of HG10008034 vs. NCBI nr
Match:
KAG7021814.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1425.2 bits (3688), Expect = 0.0e+00
Identity = 699/786 (88.93%), Postives = 742/786 (94.40%), Query Frame = 0
Query: 1 MLTRHLNFKSFHVKSNQRLPSFNFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDEAI 60
MLTRHLNFKSFHVKS QRLPSFNFFRSFQHD+NLFDQSPPPNAASTNRVLLNYLHR+EA
Sbjct: 1 MLTRHLNFKSFHVKSKQRLPSFNFFRSFQHDHNLFDQSPPPNAASTNRVLLNYLHRNEAF 60
Query: 61 QSLRFFKKQIRWGLDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLM 120
Q+LR FKK IRWGLDGN DE TLALALKACCG+PKLGRQIHGFVISSGLVS+I+VSNSLM
Sbjct: 61 QALRLFKKHIRWGLDGNVDEFTLALALKACCGVPKLGRQIHGFVISSGLVSNISVSNSLM 120
Query: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSE+ALSFA MNLNGV+FDPVTYT
Sbjct: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSESALSFAAWMNLNGVQFDPVTYT 180
Query: 181 TTLAFCLDGEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSR 240
T LAFCLDGEDF+FGWQLHTL LKCGF+ DVFVGNALITMYSRWEHLV ARQVFDEM SR
Sbjct: 181 TALAFCLDGEDFIFGWQLHTLVLKCGFQFDVFVGNALITMYSRWEHLVGARQVFDEMRSR 240
Query: 241 DRVSWSAMITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
DRVSWSAMITGYAQEG HGLEAI VF+QMVREGVKFDNVAITGA+SVCGHERNLELGKQI
Sbjct: 241 DRVSWSAMITGYAQEGDHGLEAILVFIQMVREGVKFDNVAITGAVSVCGHERNLELGKQI 300
Query: 301 HCLTVKTGYETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVS 360
HCLTVK G+ETHTSVGNVLIS YSKCE+I+DAK+ F++I DRNVISWTTM+SLYEEDAVS
Sbjct: 301 HCLTVKIGFETHTSVGNVLISTYSKCEVIDDAKSVFEIIDDRNVISWTTMISLYEEDAVS 360
Query: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYA 420
LFN+MRLDGVYPNDVTFIGLLHAIT+R MVEQGL+VHGLCIKADFV+EL VGNSLITMYA
Sbjct: 361 LFNEMRLDGVYPNDVTFIGLLHAITMRNMVEQGLMVHGLCIKADFVTELGVGNSLITMYA 420
Query: 421 KFESIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSV 480
KFES+QDASRVFMELPYREIISWNALISGYAQN LCQEALETFL AIMESKPNEYTFGSV
Sbjct: 421 KFESMQDASRVFMELPYREIISWNALISGYAQNGLCQEALETFLCAIMESKPNEYTFGSV 480
Query: 481 LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSER 540
LNAIS GE IS+KHGQRCHSHLIKVGLN PIISGALLDMYAKRGSIQESQRVFNE S+R
Sbjct: 481 LNAISGGEDISLKHGQRCHSHLIKVGLNSGPIISGALLDMYAKRGSIQESQRVFNEASKR 540
Query: 541 SQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFF 600
SQFAWTALIS YAQHGDYD VMKLFEEM+KEKI PDAVIFLSVL ACSRNRMVDMGR+FF
Sbjct: 541 SQFAWTALISGYAQHGDYDTVMKLFEEMKKEKINPDAVIFLSVLAACSRNRMVDMGRQFF 600
Query: 601 DMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGN 660
+MMI DHMIEP EHYSCMVDMLGRAG+LE+A+EMLARIPGGPGISALQSLLGACRIHGN
Sbjct: 601 NMMINDHMIEPEAEHYSCMVDMLGRAGQLEEAQEMLARIPGGPGISALQSLLGACRIHGN 660
Query: 661 LEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
++MAERMA+ALMK EP+ESGSYVLMSNLYAQKGDWEKVAE+RKGM+E+GVKKEIGFSWVD
Sbjct: 661 VDMAERMADALMKSEPLESGSYVLMSNLYAQKGDWEKVAEVRKGMKEKGVKKEIGFSWVD 720
Query: 721 VGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMKFQKDRERESQTQVIDELTVTD 780
VGNFGAS LYLHGFSSGDVSHPQS EICRMA+YMGAEMKF KDRER+ QT +ID L +TD
Sbjct: 721 VGNFGAS-LYLHGFSSGDVSHPQSEEICRMAQYMGAEMKFLKDRERQRQTHMIDGLPLTD 780
Query: 781 LFVLDG 787
LFV DG
Sbjct: 781 LFVFDG 785
BLAST of HG10008034 vs. NCBI nr
Match:
XP_023531439.1 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1416.7 bits (3666), Expect = 0.0e+00
Identity = 695/786 (88.42%), Postives = 741/786 (94.27%), Query Frame = 0
Query: 1 MLTRHLNFKSFHVKSNQRLPSFNFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDEAI 60
MLTRHLNFKSFHVKS QRL SFNFFRSF+HD+NLFDQSPPPNAASTNRVLLNYLHR+EA
Sbjct: 1 MLTRHLNFKSFHVKSKQRLTSFNFFRSFRHDHNLFDQSPPPNAASTNRVLLNYLHRNEAF 60
Query: 61 QSLRFFKKQIRWGLDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLM 120
Q+LR FKK IRWGLDGNADE TLALALKACCG+PKLGRQIHGFVISSGLVS+++VSNSLM
Sbjct: 61 QALRLFKKHIRWGLDGNADEFTLALALKACCGVPKLGRQIHGFVISSGLVSNVSVSNSLM 120
Query: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
NMYCKSGQLERAFSVFENL DPDIVSWNTILSGFQKSE+ALSFA MNLNGV+FDPVTYT
Sbjct: 121 NMYCKSGQLERAFSVFENLLDPDIVSWNTILSGFQKSESALSFAAWMNLNGVQFDPVTYT 180
Query: 181 TTLAFCLDGEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSR 240
T L+FCLDGEDF+FGWQLHTL LKCGF+ DVFVGNALITMYSRWEHLVDARQVFDEM SR
Sbjct: 181 TALSFCLDGEDFMFGWQLHTLVLKCGFQCDVFVGNALITMYSRWEHLVDARQVFDEMRSR 240
Query: 241 DRVSWSAMITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
DRVSWSAMITGYAQEG HGLEAI VF+QMVREGVKFDNVAITGA+SVCGHERNLELGKQI
Sbjct: 241 DRVSWSAMITGYAQEGDHGLEAILVFIQMVREGVKFDNVAITGAVSVCGHERNLELGKQI 300
Query: 301 HCLTVKTGYETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVS 360
HCLTVK G+ETHTSVGNVLIS YSKCE+I+DAK+ F++I DRNVISWTTM+SLYEEDAVS
Sbjct: 301 HCLTVKIGFETHTSVGNVLISTYSKCEVIDDAKSVFEIIDDRNVISWTTMISLYEEDAVS 360
Query: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYA 420
LFN+MRLDGVYPNDVTFIGLLHAIT+R MVEQGL+VHGLCIKADFV+EL VGNSLITMYA
Sbjct: 361 LFNEMRLDGVYPNDVTFIGLLHAITMRNMVEQGLMVHGLCIKADFVTELGVGNSLITMYA 420
Query: 421 KFESIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSV 480
KFES+QDASRVFMELPYREIISWNALISGYAQN LCQEALETFL AIMESKPNEYTFGSV
Sbjct: 421 KFESMQDASRVFMELPYREIISWNALISGYAQNGLCQEALETFLCAIMESKPNEYTFGSV 480
Query: 481 LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSER 540
LNAIS GE IS+KHGQRCHSHLIKVGLN PIISGALLDMYAKRGSIQESQRVF E S+R
Sbjct: 481 LNAISGGEDISLKHGQRCHSHLIKVGLNSGPIISGALLDMYAKRGSIQESQRVFKEASKR 540
Query: 541 SQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFF 600
SQFAWTALIS YAQHGDYD VMKLFEEM+KEKI PDAVIFLSVL ACSRNRMVDMGR+FF
Sbjct: 541 SQFAWTALISGYAQHGDYDTVMKLFEEMKKEKINPDAVIFLSVLAACSRNRMVDMGRQFF 600
Query: 601 DMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGN 660
+MMI DHMIEP EHYSCMVDMLGRAG+LE+A+EMLARIPGGPGISALQSLLGACRIHGN
Sbjct: 601 NMMINDHMIEPEAEHYSCMVDMLGRAGQLEEAQEMLARIPGGPGISALQSLLGACRIHGN 660
Query: 661 LEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
++MAERMA+ALMK EP+ESGSYVLMSNLYAQKGDWEKVAE+RKGM+E+GVKKEIGFSWVD
Sbjct: 661 VDMAERMADALMKSEPLESGSYVLMSNLYAQKGDWEKVAEVRKGMKEKGVKKEIGFSWVD 720
Query: 721 VGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMKFQKDRERESQTQVIDELTVTD 780
VGNFGAS LYLHGFSSGDVSHPQS EICRMA+YMGAEMKF KDRER+ QT +ID L +TD
Sbjct: 721 VGNFGAS-LYLHGFSSGDVSHPQSEEICRMAQYMGAEMKFLKDRERQRQTHMIDGLPLTD 780
Query: 781 LFVLDG 787
LFV DG
Sbjct: 781 LFVFDG 785
BLAST of HG10008034 vs. ExPASy Swiss-Prot
Match:
Q84MA3 (Pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E40 PE=2 SV=1)
HSP 1 Score: 823.5 bits (2126), Expect = 2.0e-237
Identity = 399/740 (53.92%), Postives = 541/740 (73.11%), Query Frame = 0
Query: 24 FFRSFQHDYNLFDQSPPPNA-ASTNRVLLNYLHRDEAIQSLRFFKKQIRWGLDG-NADEL 83
F+ ++ + LFD S NA S N + L R+ ++L FK+ ++ G G + DE+
Sbjct: 20 FYSPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEV 79
Query: 84 TLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLMNMYCKSGQLERAFSVFENLHD 143
TL LALKAC G K G QIHGF +SG S + VSN++M MY K+G+ + A +FENL D
Sbjct: 80 TLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVD 139
Query: 144 PDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYTTTLAFCLDGEDFLFGWQLHTL 203
PD+VSWNTILSGF ++ AL+F VRM GV FD TY+T L+FC+ E FL G QL +
Sbjct: 140 PDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 204 ALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSRDRVSWSAMITGYAQEGGHGLE 263
+K G + D+ VGN+ ITMYSR AR+VFDEM +D +SW+++++G +QEG G E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 264 AISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQIHCLTVKTGYETHTSVGNVLIS 323
A+ +F M+REGV+ D+V+ T ++ C HE +L+L +QIH L +K GYE+ VGN+L+S
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 324 MYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVSLFNKMRLDGVYPNDVTFIGLL 383
YSKC ++E K+ F + +RNV+SWTTM+S ++DAVS+F MR DGVYPN+VTF+GL+
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLI 379
Query: 384 HAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYAKFESIQDASRVFMELPYREII 443
+A+ +++GL +HGLCIK FVSE SVGNS IT+YAKFE+++DA + F ++ +REII
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREII 439
Query: 444 SWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSVLNAISAGEGISIKHGQRCHSH 503
SWNA+ISG+AQN EAL+ FL A E+ PNEYTFGSVLNAI+ E IS+K GQRCH+H
Sbjct: 440 SWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 504 LIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSERSQFAWTALISAYAQHGDYDLV 563
L+K+GLN P++S ALLDMYAKRG+I ES++VFNE S+++QF WT++ISAY+ HGD++ V
Sbjct: 500 LLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETV 559
Query: 564 MKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFFDMMIKDHMIEPAGEHYSCMVD 623
M LF +M KE + PD V FLSVLTAC+R MVD G F+MMI+ + +EP+ EHYSCMVD
Sbjct: 560 MNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVD 619
Query: 624 MLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGNLEMAERMANALMKEEPMESGS 683
MLGRAGRL++AEE+++ +PGGPG S LQS+LG+CR+HGN++M ++A M+ +P SGS
Sbjct: 620 MLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGS 679
Query: 684 YVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVDVGNFGASNLYLHGFSSGDVSH 743
YV M N+YA+K +W+K AE+RK MR++ V KE GFSW+DVG+ S L + GFSSGD SH
Sbjct: 680 YVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGS-LTMQGFSSGDKSH 739
Query: 744 PQSGEICRMAEYMGAEMKFQ 762
P+S EI RM E +G EM +
Sbjct: 740 PKSDEIYRMVEIIGLEMNLE 758
BLAST of HG10008034 vs. ExPASy Swiss-Prot
Match:
Q9ZUW3 (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1)
HSP 1 Score: 437.6 bits (1124), Expect = 3.0e-121
Identity = 241/738 (32.66%), Postives = 408/738 (55.28%), Query Frame = 0
Query: 32 YNLFDQSPPPNAASTNRVLLNYLHRDEAIQSLRFFKKQIRWGLDGNADELTLALALKACC 91
+NLFD+SP + S +L + ++ R F R G++ + + L + A
Sbjct: 47 HNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATL 106
Query: 92 GLPKLGRQIHGFVISSGLVSHITVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSWNTIL 151
GRQ+H I G + ++V SL++ Y K + VF+ + + ++V+W T++
Sbjct: 107 CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLI 166
Query: 152 SGFQK---SENALSFAVRMNLNGVKFDPVTYTTTLAFCLDGEDFLFGWQLHTLALKCGFK 211
SG+ + ++ L+ +RM G + + T+ L + G Q+HT+ +K G
Sbjct: 167 SGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 212 GDVFVGNALITMYSRWEHLVDARQVFDEMWSRDRVSWSAMITGYAQEGGHGLEAISVFVQ 271
+ V N+LI +Y + ++ AR +FD+ + V+W++MI+GYA G LEA+ +F
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA-ANGLDLEALGMFYS 286
Query: 272 MVREGVKFDNVAITGALSVCGHERNLELGKQIHCLTVKTGYETHTSVGNVLISMYSKCEI 331
M V+ + + +C + + L +Q+HC VK G+ ++ L+ YSKC
Sbjct: 287 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 346
Query: 332 IEDAKAAFKLIK-DRNVISWTTMLSLY-----EEDAVSLFNKMRLDGVYPNDVTFIGLLH 391
+ DA FK I NV+SWT M+S + +E+AV LF++M+ GV PN+ T+ +L
Sbjct: 347 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 406
Query: 392 AITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYAKFESIQDASRVFMELPYREIIS 451
A+ + E VH +K ++ +VG +L+ Y K +++A++VF + ++I++
Sbjct: 407 ALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 466
Query: 452 WNALISGYAQNALCQEALETFLYAIMES-KPNEYTFGSVLNAISAGEGISIKHGQRCHSH 511
W+A+++GYAQ + A++ F KPNE+TF S+LN + A S+ G++ H
Sbjct: 467 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN-VCAATNASMGQGKQFHGF 526
Query: 512 LIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSERSQFAWTALISAYAQHGDYDLV 571
IK L+ +S ALL MYAK+G+I+ ++ VF E+ +W ++IS YAQHG
Sbjct: 527 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 586
Query: 572 MKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFFDMMIKDHMIEPAGEHYSCMVD 631
+ +F+EM+K K+K D V F+ V AC+ +V+ G ++FD+M++D I P EH SCMVD
Sbjct: 587 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 646
Query: 632 MLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGNLEMAERMANALMKEEPMESGS 691
+ RAG+LE A +++ +P G + +++L ACR+H E+ A ++ +P +S +
Sbjct: 647 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAA 706
Query: 692 YVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVDVGNFGASNLYLHGFSSGDVSH 751
YVL+SN+YA+ GDW++ A++RK M ER VKKE G+SW++V N + F +GD SH
Sbjct: 707 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN------KTYSFLAGDRSH 766
Query: 752 PQSGEICRMAEYMGAEMK 760
P +I E + +K
Sbjct: 767 PLKDQIYMKLEDLSTRLK 772
BLAST of HG10008034 vs. ExPASy Swiss-Prot
Match:
Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)
HSP 1 Score: 432.2 bits (1110), Expect = 1.3e-119
Identity = 254/725 (35.03%), Postives = 391/725 (53.93%), Query Frame = 0
Query: 34 LFDQSPPPNAASTNRVLLNYLHRDEAIQSLRFFKKQIRWGLDGNADELTLALALKACCGL 93
LF + P+ + N ++ + R ++ +F + + L L+
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 94 PKLGRQIHGFVISSGLVSHITVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSWNTILSG 153
LG +H I GL S+I V +SL++MY K ++E A VFE L + + V WN ++ G
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 154 FQ---KSENALSFAVRMNLNGVKFDPVTYTTTLAFCLDGEDFLFGWQLHTLALKCGFKGD 213
+ +S + + M +G D T+T+ L+ C D G Q H++ +K +
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 214 VFVGNALITMYSRWEHLVDARQVFDEMWSRDRVSWSAMITGYAQEGGHGLEAISVFVQMV 273
+FVGNAL+ MY++ L DARQ+F+ M RD V+W+ +I Y Q+ EA +F +M
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENES-EAFDLFKRMN 522
Query: 274 REGVKFDNVAITGALSVCGHERNLELGKQIHCLTVKTGYETHTSVGNVLISMYSKCEIIE 333
G+ D + L C H L GKQ+HCL+VK G + G+ LI MYSKC II+
Sbjct: 523 LCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIK 582
Query: 334 DAKAAFKLIKDRNVISWTTMLSLYE----EDAVSLFNKMRLDGVYPNDVTFIGLLHAITI 393
DA+ F + + +V+S +++ Y E+AV LF +M GV P+++TF ++ A
Sbjct: 583 DARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHK 642
Query: 394 RGMVEQGLIVHGLCIKADFVSELS-VGNSLITMYAKFESIQDASRVFMELPY-REIISWN 453
+ G HG K F SE +G SL+ MY + +A +F EL + I+ W
Sbjct: 643 PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWT 702
Query: 454 ALISGYAQNALCQEALETFLYAIMES-KPNEYTFGSVLNAISAGEGISIKHGQRCHSHLI 513
++SG++QN +EAL+ + + P++ TF +VL S S++ G+ HS +
Sbjct: 703 GMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS--SLREGRAIHSLIF 762
Query: 514 KVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSERSQ-FAWTALISAYAQHGDYDLVM 573
+ + D + S L+DMYAK G ++ S +VF+E RS +W +LI+ YA++G + +
Sbjct: 763 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDAL 822
Query: 574 KLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFFDMMIKDHMIEPAGEHYSCMVDM 633
K+F+ M + I PD + FL VLTACS V GR+ F+MMI + IE +H +CMVD+
Sbjct: 823 KIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDL 882
Query: 634 LGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGNLEMAERMANALMKEEPMESGSY 693
LGR G L++A++ + P SLLGACRIHG+ E A L++ EP S +Y
Sbjct: 883 LGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAY 942
Query: 694 VLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVDVGNFGASNLYLHGFSSGDVSHP 748
VL+SN+YA +G WEK +RK MR+RGVKK G+SW+DV H F++GD SH
Sbjct: 943 VLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDV------EQRTHIFAAGDKSHS 998
BLAST of HG10008034 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-117
Identity = 246/698 (35.24%), Postives = 395/698 (56.59%), Query Frame = 0
Query: 74 LDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLMNMYCKSGQLERAF 133
+ N E AL L+ C L +L RQI V +GL L++++C+ G ++ A
Sbjct: 31 IPANVYEHPAALLLERCSSLKEL-RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAA 90
Query: 134 SVFENLHDPDIVSWNTILSGFQK---SENALSFAVRMNLNGVKFDPVTYTTT--LAFCLD 193
VFE + V ++T+L GF K + AL F VRM + V +PV Y T L C D
Sbjct: 91 RVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV--EPVVYNFTYLLKVCGD 150
Query: 194 GEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSRDRVSWSAM 253
+ G ++H L +K GF D+F L MY++ + +AR+VFD M RD VSW+ +
Sbjct: 151 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTI 210
Query: 254 ITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQIHCLTVKTG 313
+ GY+Q G + A+ + M E +K + I L R + +GK+IH +++G
Sbjct: 211 VAGYSQNGMARM-ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 270
Query: 314 YETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLY-----EEDAVSLFN 373
+++ ++ L+ MY+KC +E A+ F + +RNV+SW +M+ Y ++A+ +F
Sbjct: 271 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 330
Query: 374 KMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYAKFE 433
KM +GV P DV+ +G LHA G +E+G +H L ++ +SV NSLI+MY K +
Sbjct: 331 KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK 390
Query: 434 SIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMES-KPNEYTFGSVLN 493
+ A+ +F +L R ++SWNA+I G+AQN +AL F + KP+ +T+ SV+
Sbjct: 391 EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 450
Query: 494 AISAGEGISIKHGQR-CHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSERS 553
AI+ +SI H + H +++ L+ + ++ AL+DMYAK G+I ++ +F+ SER
Sbjct: 451 AIAE---LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH 510
Query: 554 QFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFFD 613
W A+I Y HG ++LFEEM+K IKP+ V FLSV++ACS + +V+ G + F
Sbjct: 511 VTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFY 570
Query: 614 MMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGNL 673
MM +++ IE + +HY MVD+LGRAGRL +A + + ++P P ++ ++LGAC+IH N+
Sbjct: 571 MMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNV 630
Query: 674 EMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVDV 733
AE+ A L + P + G +VL++N+Y WEKV ++R M +G++K G S V++
Sbjct: 631 NFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEI 690
Query: 734 GNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMK 760
N +H F SG +HP S +I E + +K
Sbjct: 691 KN------EVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
BLAST of HG10008034 vs. ExPASy Swiss-Prot
Match:
Q9FWA6 (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)
HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-112
Identity = 245/761 (32.19%), Postives = 406/761 (53.35%), Query Frame = 0
Query: 33 NLFDQSPPPNAASTNRVLLNYLHRDEAIQSLRFFKKQIRWGLDGNADELTLALALKACCG 92
+ F+ P + S N +L YL E+++S+ F R G++ D T A+ LK C
Sbjct: 135 SFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE--FDGRTFAIILKVCSF 194
Query: 93 L--PKLGRQIHGFVISSGLVSHITVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSWNTI 152
L LG QIHG V+ G + + +++L++MY K + + VF+ + + + VSW+ I
Sbjct: 195 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 254
Query: 153 LSGFQKS---ENALSFAVRMNLNGVKFDPVTYTTTLAFCLDGEDFLFGWQLHTLALKCGF 212
++G ++ AL F M Y + L C + G QLH ALK F
Sbjct: 255 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 314
Query: 213 KGDVFVGNALITMYSRWEHLVDARQVFDEMWSRDRVSWSAMITGYAQEGGHGLEAISVFV 272
D V A + MY++ +++ DA+ +FD + +R S++AMITGY+QE HG +A+ +F
Sbjct: 315 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQE-EHGFKALLLFH 374
Query: 273 QMVREGVKFDNVAITGALSVCGHERNLELGKQIHCLTVKTGYETHTSVGNVLISMYSKCE 332
+++ G+ FD ++++G C + L G QI+ L +K+ V N I MY KC+
Sbjct: 375 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 434
Query: 333 IIEDAKAAFKLIKDRNVISWTTMLSLYEE-----DAVSLFNKMRLDGVYPNDVTFIGLLH 392
+ +A F ++ R+ +SW +++ +E+ + + LF M + P++ TF +L
Sbjct: 435 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 494
Query: 393 AITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYAKFESIQDASRVFMELPYRE--- 452
A T G + G+ +H +K+ S SVG SLI MY+K I++A ++ R
Sbjct: 495 ACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 554
Query: 453 -----------------IISWNALISGYAQNALCQEALETFLYAI-MESKPNEYTFGSVL 512
+SWN++ISGY ++A F + M P+++T+ +VL
Sbjct: 555 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 614
Query: 513 NAIS--AGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSE 572
+ + A G+ G++ H+ +IK L D I L+DMY+K G + +S+ +F ++
Sbjct: 615 DTCANLASAGL----GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLR 674
Query: 573 RSQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRF 632
R W A+I YA HG + ++LFE M E IKP+ V F+S+L AC+ ++D G +
Sbjct: 675 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEY 734
Query: 633 FDMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIH- 692
F MM +D+ ++P HYS MVD+LG++G+++ A E++ +P ++LLG C IH
Sbjct: 735 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHR 794
Query: 693 GNLEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSW 752
N+E+AE AL++ +P +S +Y L+SN+YA G WEKV+++R+ MR +KKE G SW
Sbjct: 795 NNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSW 854
Query: 753 VDVGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMK 760
V++ + LH F GD +HP+ EI + +EMK
Sbjct: 855 VELKD------ELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
BLAST of HG10008034 vs. ExPASy TrEMBL
Match:
A0A6J1EK48 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111434059 PE=4 SV=1)
HSP 1 Score: 1426.8 bits (3692), Expect = 0.0e+00
Identity = 699/786 (88.93%), Postives = 743/786 (94.53%), Query Frame = 0
Query: 1 MLTRHLNFKSFHVKSNQRLPSFNFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDEAI 60
MLTRHLNFKSFHVKS QRLPSFNFFRSFQHD+NLFDQSPPPNAASTNRVLLNYLHR+EA
Sbjct: 1 MLTRHLNFKSFHVKSKQRLPSFNFFRSFQHDHNLFDQSPPPNAASTNRVLLNYLHRNEAF 60
Query: 61 QSLRFFKKQIRWGLDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLM 120
Q+LR FKK IRWGLDGNAD TLALALKACCG+PKLGRQIHGFVISSGLVS+I+VSNSLM
Sbjct: 61 QALRLFKKHIRWGLDGNADGFTLALALKACCGVPKLGRQIHGFVISSGLVSNISVSNSLM 120
Query: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSE+ALSFA MNLNGV+FDPVTYT
Sbjct: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSESALSFAAWMNLNGVRFDPVTYT 180
Query: 181 TTLAFCLDGEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSR 240
T LAFCLDGEDF+FGWQLHTL LKCGF+ D+FVGNALITMYSRWEHLVDARQVFDEM SR
Sbjct: 181 TALAFCLDGEDFIFGWQLHTLVLKCGFQCDIFVGNALITMYSRWEHLVDARQVFDEMRSR 240
Query: 241 DRVSWSAMITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
DRVSWSAMITGYAQEG HGLEAI VF+QMVREGVKFDNVAITGA+SVCGHERNLELGKQI
Sbjct: 241 DRVSWSAMITGYAQEGDHGLEAILVFIQMVREGVKFDNVAITGAVSVCGHERNLELGKQI 300
Query: 301 HCLTVKTGYETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVS 360
HCLTVK G+ETHTSVGNVLIS YSKCE+I+DAK+ F++I DRNVISWTTM+SLYEEDAVS
Sbjct: 301 HCLTVKIGFETHTSVGNVLISTYSKCEVIDDAKSVFEIIDDRNVISWTTMISLYEEDAVS 360
Query: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYA 420
LFN+MRLDGVYPNDVTFIGLLHAIT+R MVEQGL+VHGLCIKADFV+EL VGNSLITMYA
Sbjct: 361 LFNEMRLDGVYPNDVTFIGLLHAITMRNMVEQGLMVHGLCIKADFVTELGVGNSLITMYA 420
Query: 421 KFESIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSV 480
KFES+QDASRVFMELPYREIISWNALISGYAQN LCQEALETFL AIMESKPNEYTFGSV
Sbjct: 421 KFESMQDASRVFMELPYREIISWNALISGYAQNGLCQEALETFLCAIMESKPNEYTFGSV 480
Query: 481 LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSER 540
LNAIS GE IS+KHGQRCHSHLIKVGLN PIISGALLDMYAKRGSIQESQRVFNE S+R
Sbjct: 481 LNAISGGEDISLKHGQRCHSHLIKVGLNSGPIISGALLDMYAKRGSIQESQRVFNEASKR 540
Query: 541 SQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFF 600
SQFAWTALIS YAQHGDYD VMKLFEEM+KEKI PDAVIFLSVL ACSRNRMVDMGR+FF
Sbjct: 541 SQFAWTALISGYAQHGDYDTVMKLFEEMKKEKINPDAVIFLSVLAACSRNRMVDMGRQFF 600
Query: 601 DMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGN 660
+MMI DHMIEP EHYSCMVDMLGRAG+LE+A+EMLARIPGGPGISALQSLLGACRIHGN
Sbjct: 601 NMMINDHMIEPEAEHYSCMVDMLGRAGQLEEAQEMLARIPGGPGISALQSLLGACRIHGN 660
Query: 661 LEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
++MAERMA+ALMK EP+ESGSYVLMSNLYAQKGDWEKVAE+RKGM+E+GVKKEIGFSWVD
Sbjct: 661 VDMAERMADALMKSEPLESGSYVLMSNLYAQKGDWEKVAEVRKGMKEKGVKKEIGFSWVD 720
Query: 721 VGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMKFQKDRERESQTQVIDELTVTD 780
VGNFGAS LYLHGFSSGDVSHPQS EICRMA+YMGAEMKF KDRER+ QT +ID L +TD
Sbjct: 721 VGNFGAS-LYLHGFSSGDVSHPQSEEICRMAQYMGAEMKFLKDRERQRQTHMIDGLPLTD 780
Query: 781 LFVLDG 787
LFV DG
Sbjct: 781 LFVFDG 785
BLAST of HG10008034 vs. ExPASy TrEMBL
Match:
A0A5D3DTC6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold876G00080 PE=4 SV=1)
HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 703/786 (89.44%), Postives = 731/786 (93.00%), Query Frame = 0
Query: 1 MLTRHLNFKSFHVKSNQRLPSFNFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDEAI 60
MLTRHLNF SFHVKS QR PSF FRSF HDYNLFDQSP NAAS NRVLLNYL RD A
Sbjct: 1 MLTRHLNFNSFHVKSKQRFPSFKIFRSFHHDYNLFDQSPTSNAASFNRVLLNYLSRDGAF 60
Query: 61 QSLRFFKKQIRWGLDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLM 120
QSLRFFKK RWGLDGN DE TLALALKACCGLPKLGRQIHGFVISSG VSHITVSNSLM
Sbjct: 61 QSLRFFKKNFRWGLDGNTDEFTLALALKACCGLPKLGRQIHGFVISSGFVSHITVSNSLM 120
Query: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGF+KSENALSFA+RMNLNGVKFD VTYT
Sbjct: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFEKSENALSFALRMNLNGVKFDSVTYT 180
Query: 181 TTLAFCLDGEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSR 240
T L+FCLD EDFLFGWQLHTLALKCG K DVFVGNAL+TMYSR EHLVDAR+VFDEM SR
Sbjct: 181 TALSFCLDIEDFLFGWQLHTLALKCGLKSDVFVGNALVTMYSRCEHLVDARKVFDEMPSR 240
Query: 241 DRVSWSAMITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
DRVSWSAMITGYAQEG +GL+AI VFVQMVREGVKFDNV ITGALSVCGHERNLELGKQI
Sbjct: 241 DRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQI 300
Query: 301 HCLTVKTGYETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVS 360
HCL VKTG+ETHTSVGNVLIS YSKCEIIEDAKA F+LI DRNVISWTTM+SLYEE AVS
Sbjct: 301 HCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVS 360
Query: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYA 420
LFNKMRLDGVYPNDVTFIGLLHAITIR MVEQGL+VHGLCIKADFVSEL+VGNSLITMYA
Sbjct: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYA 420
Query: 421 KFESIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSV 480
KFE +QDASRVFMELPYREIISWNALISGYAQNALCQEALE F YAIME KPNEYTFGSV
Sbjct: 421 KFEFMQDASRVFMELPYREIISWNALISGYAQNALCQEALEAFFYAIMEYKPNEYTFGSV 480
Query: 481 LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSER 540
LNAISAGE IS+KHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETS++
Sbjct: 481 LNAISAGEDISLKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSKQ 540
Query: 541 SQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFF 600
SQFAWTALIS YAQHGDY+ V+KLFEEMEKEKIKPDAVIFLSVLTACSRNRMV+MGR+ F
Sbjct: 541 SQFAWTALISGYAQHGDYESVIKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVNMGRQLF 600
Query: 601 DMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGN 660
DMMIKDHMIEP GEHYSCMVDMLGRAGRLE+AEE+LA IPGGPGISALQSLLGACR HGN
Sbjct: 601 DMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILASIPGGPGISALQSLLGACRTHGN 660
Query: 661 LEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
+EMAER+AN LMK+EP+ESG YVLMSNLYAQKGDWEKVAEMRK MRERGVKKEIGFSWVD
Sbjct: 661 VEMAERIANDLMKKEPLESGPYVLMSNLYAQKGDWEKVAEMRKEMRERGVKKEIGFSWVD 720
Query: 721 VGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMKFQKDRERESQTQVIDELTVTD 780
VGNFGASNLYLHGFSSGDVSHPQS EI RMA+YMGAEMKF KDR RES VI ELT+TD
Sbjct: 721 VGNFGASNLYLHGFSSGDVSHPQSEEIFRMAKYMGAEMKFLKDRARESHISVIGELTLTD 780
Query: 781 LFVLDG 787
LFVLDG
Sbjct: 781 LFVLDG 786
BLAST of HG10008034 vs. ExPASy TrEMBL
Match:
A0A6J1KH73 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111495220 PE=4 SV=1)
HSP 1 Score: 1414.1 bits (3659), Expect = 0.0e+00
Identity = 694/786 (88.30%), Postives = 739/786 (94.02%), Query Frame = 0
Query: 1 MLTRHLNFKSFHVKSNQRLPSFNFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDEAI 60
MLTRHLNFKSFHVKS QRLPSFNFFRSF+HD+NLFDQSPPPNAASTNRVLL+YLHR+EA
Sbjct: 1 MLTRHLNFKSFHVKSKQRLPSFNFFRSFRHDHNLFDQSPPPNAASTNRVLLDYLHRNEAF 60
Query: 61 QSLRFFKKQIRWGLDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLM 120
Q+LR FKK IRW LDGNADE TLALALKACCG+PKLGRQIHGF ISSGLV +I+VSNSLM
Sbjct: 61 QALRLFKKHIRWDLDGNADEFTLALALKACCGVPKLGRQIHGFAISSGLVLNISVSNSLM 120
Query: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSE+ALSFA MNLNGV+FDPVTYT
Sbjct: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSESALSFAAWMNLNGVQFDPVTYT 180
Query: 181 TTLAFCLDGEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSR 240
T LAFCLDGEDF+FGWQLHTL LKCGF+ DVFVGNALITMYSRWEHLVDARQVFDEM SR
Sbjct: 181 TALAFCLDGEDFIFGWQLHTLVLKCGFQCDVFVGNALITMYSRWEHLVDARQVFDEMRSR 240
Query: 241 DRVSWSAMITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
DRVSWSAMITGYAQEG HGLEAI VF+QMVREGVKFDNVAITGA+SVCGHERNLELGKQI
Sbjct: 241 DRVSWSAMITGYAQEGDHGLEAILVFIQMVREGVKFDNVAITGAVSVCGHERNLELGKQI 300
Query: 301 HCLTVKTGYETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVS 360
HCLTVK G+ETHTSVGNVLIS YSKCE+IEDAK+ F++I DRNVISWTTM+SLYEEDAVS
Sbjct: 301 HCLTVKIGFETHTSVGNVLISTYSKCEVIEDAKSVFEIIDDRNVISWTTMISLYEEDAVS 360
Query: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYA 420
LFN+MRLDGVYPNDVTFIGLLHAIT+R MVEQGL+VHGLCIKADFV+EL VGNSLITMYA
Sbjct: 361 LFNEMRLDGVYPNDVTFIGLLHAITMRNMVEQGLMVHGLCIKADFVTELCVGNSLITMYA 420
Query: 421 KFESIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSV 480
KFES+QDASRVFMELPYREIISWNALISGYAQN LCQEALETFL AIMESKPNEYTFGSV
Sbjct: 421 KFESMQDASRVFMELPYREIISWNALISGYAQNGLCQEALETFLCAIMESKPNEYTFGSV 480
Query: 481 LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSER 540
LNAIS GE ISIKHGQRCHSHLIKVGLN PIISGALLDMYAKRGSIQESQRVFNE S+R
Sbjct: 481 LNAISGGEDISIKHGQRCHSHLIKVGLNSGPIISGALLDMYAKRGSIQESQRVFNEASKR 540
Query: 541 SQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFF 600
S FAWTALIS YAQHGDYD VMKLFEEM+KEKI PDAVIFLS+L ACSRNRMVDMGR+FF
Sbjct: 541 SPFAWTALISGYAQHGDYDSVMKLFEEMKKEKINPDAVIFLSILAACSRNRMVDMGRQFF 600
Query: 601 DMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGN 660
+MMI DHMIEP EHYSCMVDMLGRAG+LE+A+EMLARIPGGPGISALQSLLGACRIHGN
Sbjct: 601 NMMINDHMIEPEAEHYSCMVDMLGRAGQLEEAQEMLARIPGGPGISALQSLLGACRIHGN 660
Query: 661 LEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
++MAERMA+ALMK EP+ESGSYVLMSNLYAQKGDWEKVAE+RKGM+E+GVKKEIGFSWVD
Sbjct: 661 VDMAERMADALMKTEPLESGSYVLMSNLYAQKGDWEKVAEVRKGMKEKGVKKEIGFSWVD 720
Query: 721 VGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMKFQKDRERESQTQVIDELTVTD 780
VGNFGAS LYLHGFSSGDVSHPQS EIC+MA+YMGAEMKF KDRER+ QT +ID L +TD
Sbjct: 721 VGNFGAS-LYLHGFSSGDVSHPQSEEICKMAQYMGAEMKFLKDRERQRQTHMIDGLPLTD 780
Query: 781 LFVLDG 787
L V DG
Sbjct: 781 LLVFDG 785
BLAST of HG10008034 vs. ExPASy TrEMBL
Match:
A0A5A7TTA5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00830 PE=4 SV=1)
HSP 1 Score: 1409.4 bits (3647), Expect = 0.0e+00
Identity = 700/786 (89.06%), Postives = 730/786 (92.88%), Query Frame = 0
Query: 1 MLTRHLNFKSFHVKSNQRLPSFNFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDEAI 60
MLTRHLNF SFHVKS QR PSF FRSF HDYNLFDQSP NAAS NRVLLNYL RD A
Sbjct: 1 MLTRHLNFNSFHVKSKQRFPSFKIFRSFHHDYNLFDQSPTSNAASFNRVLLNYLSRDGAF 60
Query: 61 QSLRFFKKQIRWGLDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLM 120
QSLRFFKK RWGLDGN DE TLALALKACCGLPKLGRQIHGFVISSG SHITVSNSLM
Sbjct: 61 QSLRFFKKNFRWGLDGNTDEFTLALALKACCGLPKLGRQIHGFVISSGFFSHITVSNSLM 120
Query: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGF+KSENALSFA+RMNLNGVKFD VTYT
Sbjct: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFEKSENALSFALRMNLNGVKFDSVTYT 180
Query: 181 TTLAFCLDGEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSR 240
T L+FCLD EDFLFGWQLH+LALKCG + DVFVGNAL+TMYSR EHLVDAR+VFDEM SR
Sbjct: 181 TALSFCLDIEDFLFGWQLHSLALKCGLESDVFVGNALVTMYSRCEHLVDARKVFDEMPSR 240
Query: 241 DRVSWSAMITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
DRVSWSAMITGYAQEG +GL+AI VFVQMVREGVKFDNV ITGALSVCGHERNLELGKQI
Sbjct: 241 DRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQI 300
Query: 301 HCLTVKTGYETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVS 360
HCL VKTG+ETHTSVGNVLIS YSKCEIIEDAKA F+LI DRNVISWTTM+SLYEE AVS
Sbjct: 301 HCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVS 360
Query: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYA 420
LFNKMRLDGVYPNDVTFIGLLHAITIR MVEQGL+VHGLCIKADFVSEL+VGNSLITMYA
Sbjct: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYA 420
Query: 421 KFESIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSV 480
KFE +QDASRVFMELPYREIISWNALISGYAQNALCQEALE F YAIME KPNEYTFGSV
Sbjct: 421 KFEFMQDASRVFMELPYREIISWNALISGYAQNALCQEALEAFFYAIMEYKPNEYTFGSV 480
Query: 481 LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSER 540
LNAISAGE IS+KHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETS++
Sbjct: 481 LNAISAGEDISLKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSKQ 540
Query: 541 SQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFF 600
SQFAWTALIS YAQHGDY+ V+KLFEEMEKEKIKPDAVIFLSVLTACSRNRMV+MGR+ F
Sbjct: 541 SQFAWTALISGYAQHGDYESVIKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVNMGRQLF 600
Query: 601 DMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGN 660
DMMIKDHMIEP GEHYSCMVDMLGRAGRLE+AEE+LA IPGGPGISALQSLLGACR HGN
Sbjct: 601 DMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILASIPGGPGISALQSLLGACRTHGN 660
Query: 661 LEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
+EMAER+AN LMK+EP+ESG YVLMSNLYAQKGDWEKVAEMRK MRERGVKKEIGFSWVD
Sbjct: 661 VEMAERIANDLMKKEPLESGPYVLMSNLYAQKGDWEKVAEMRKEMRERGVKKEIGFSWVD 720
Query: 721 VGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMKFQKDRERESQTQVIDELTVTD 780
VGNFGASNLYLHGFSSGDVSHPQS EI RMA+YMGAEMKF KDR RES VI ELT+TD
Sbjct: 721 VGNFGASNLYLHGFSSGDVSHPQSEEIFRMAKYMGAEMKFLKDRARESHISVIGELTLTD 780
Query: 781 LFVLDG 787
LFVLDG
Sbjct: 781 LFVLDG 786
BLAST of HG10008034 vs. ExPASy TrEMBL
Match:
A0A1S3BA52 (pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487459 PE=4 SV=1)
HSP 1 Score: 1409.4 bits (3647), Expect = 0.0e+00
Identity = 700/786 (89.06%), Postives = 730/786 (92.88%), Query Frame = 0
Query: 1 MLTRHLNFKSFHVKSNQRLPSFNFFRSFQHDYNLFDQSPPPNAASTNRVLLNYLHRDEAI 60
MLTRHLNF SFHVKS QR PSF FRSF HDYNLFDQSP NAAS NRVLLNYL RD A
Sbjct: 1 MLTRHLNFNSFHVKSKQRFPSFKIFRSFHHDYNLFDQSPTSNAASFNRVLLNYLSRDGAF 60
Query: 61 QSLRFFKKQIRWGLDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLM 120
QSLRFFKK RWGLDGN DE TLALALKACCGLPKLGRQIHGFVISSG SHITVSNSLM
Sbjct: 61 QSLRFFKKNFRWGLDGNTDEFTLALALKACCGLPKLGRQIHGFVISSGFFSHITVSNSLM 120
Query: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYT 180
NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGF+KSENALSFA+RMNLNGVKFD VTYT
Sbjct: 121 NMYCKSGQLERAFSVFENLHDPDIVSWNTILSGFEKSENALSFALRMNLNGVKFDSVTYT 180
Query: 181 TTLAFCLDGEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSR 240
T L+FCLD EDFLFGWQLH+LALKCG + DVFVGNAL+TMYSR EHLVDAR+VFDEM SR
Sbjct: 181 TALSFCLDIEDFLFGWQLHSLALKCGLESDVFVGNALVTMYSRCEHLVDARKVFDEMPSR 240
Query: 241 DRVSWSAMITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQI 300
DRVSWSAMITGYAQEG +GL+AI VFVQMVREGVKFDNV ITGALSVCGHERNLELGKQI
Sbjct: 241 DRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQI 300
Query: 301 HCLTVKTGYETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVS 360
HCL VKTG+ETHTSVGNVLIS YSKCEIIEDAKA F+LI DRNVISWTTM+SLYEE AVS
Sbjct: 301 HCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVS 360
Query: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYA 420
LFNKMRLDGVYPNDVTFIGLLHAITIR MVEQGL+VHGLCIKADFVSEL+VGNSLITMYA
Sbjct: 361 LFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYA 420
Query: 421 KFESIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSV 480
KFE +QDASRVFMELPYREIISWNALISGYAQNALCQEALE F YAIME KPNEYTFGSV
Sbjct: 421 KFEFMQDASRVFMELPYREIISWNALISGYAQNALCQEALEAFFYAIMEYKPNEYTFGSV 480
Query: 481 LNAISAGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSER 540
LNAISAGE IS+KHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETS++
Sbjct: 481 LNAISAGEDISLKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSKQ 540
Query: 541 SQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFF 600
SQFAWTALIS YAQHGDY+ V+KLFEEMEKEKIKPDAVIFLSVLTACSRNRMV+MGR+ F
Sbjct: 541 SQFAWTALISGYAQHGDYESVIKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVNMGRQLF 600
Query: 601 DMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGN 660
DMMIKDHMIEP GEHYSCMVDMLGRAGRLE+AEE+LA IPGGPGISALQSLLGACR HGN
Sbjct: 601 DMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILASIPGGPGISALQSLLGACRTHGN 660
Query: 661 LEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVD 720
+EMAER+AN LMK+EP+ESG YVLMSNLYAQKGDWEKVAEMRK MRERGVKKEIGFSWVD
Sbjct: 661 VEMAERIANDLMKKEPLESGPYVLMSNLYAQKGDWEKVAEMRKEMRERGVKKEIGFSWVD 720
Query: 721 VGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMKFQKDRERESQTQVIDELTVTD 780
VGNFGASNLYLHGFSSGDVSHPQS EI RMA+YMGAEMKF KDR RES VI ELT+TD
Sbjct: 721 VGNFGASNLYLHGFSSGDVSHPQSEEIFRMAKYMGAEMKFLKDRARESHISVIGELTLTD 780
Query: 781 LFVLDG 787
LFVLDG
Sbjct: 781 LFVLDG 786
BLAST of HG10008034 vs. TAIR 10
Match:
AT4G32430.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 823.5 bits (2126), Expect = 1.4e-238
Identity = 399/740 (53.92%), Postives = 541/740 (73.11%), Query Frame = 0
Query: 24 FFRSFQHDYNLFDQSPPPNA-ASTNRVLLNYLHRDEAIQSLRFFKKQIRWGLDG-NADEL 83
F+ ++ + LFD S NA S N + L R+ ++L FK+ ++ G G + DE+
Sbjct: 20 FYSPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEV 79
Query: 84 TLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLMNMYCKSGQLERAFSVFENLHD 143
TL LALKAC G K G QIHGF +SG S + VSN++M MY K+G+ + A +FENL D
Sbjct: 80 TLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVD 139
Query: 144 PDIVSWNTILSGFQKSENALSFAVRMNLNGVKFDPVTYTTTLAFCLDGEDFLFGWQLHTL 203
PD+VSWNTILSGF ++ AL+F VRM GV FD TY+T L+FC+ E FL G QL +
Sbjct: 140 PDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 204 ALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSRDRVSWSAMITGYAQEGGHGLE 263
+K G + D+ VGN+ ITMYSR AR+VFDEM +D +SW+++++G +QEG G E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 264 AISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQIHCLTVKTGYETHTSVGNVLIS 323
A+ +F M+REGV+ D+V+ T ++ C HE +L+L +QIH L +K GYE+ VGN+L+S
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 324 MYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLYEEDAVSLFNKMRLDGVYPNDVTFIGLL 383
YSKC ++E K+ F + +RNV+SWTTM+S ++DAVS+F MR DGVYPN+VTF+GL+
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLI 379
Query: 384 HAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYAKFESIQDASRVFMELPYREII 443
+A+ +++GL +HGLCIK FVSE SVGNS IT+YAKFE+++DA + F ++ +REII
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREII 439
Query: 444 SWNALISGYAQNALCQEALETFLYAIMESKPNEYTFGSVLNAISAGEGISIKHGQRCHSH 503
SWNA+ISG+AQN EAL+ FL A E+ PNEYTFGSVLNAI+ E IS+K GQRCH+H
Sbjct: 440 SWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 504 LIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSERSQFAWTALISAYAQHGDYDLV 563
L+K+GLN P++S ALLDMYAKRG+I ES++VFNE S+++QF WT++ISAY+ HGD++ V
Sbjct: 500 LLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETV 559
Query: 564 MKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFFDMMIKDHMIEPAGEHYSCMVD 623
M LF +M KE + PD V FLSVLTAC+R MVD G F+MMI+ + +EP+ EHYSCMVD
Sbjct: 560 MNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVD 619
Query: 624 MLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGNLEMAERMANALMKEEPMESGS 683
MLGRAGRL++AEE+++ +PGGPG S LQS+LG+CR+HGN++M ++A M+ +P SGS
Sbjct: 620 MLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGS 679
Query: 684 YVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVDVGNFGASNLYLHGFSSGDVSH 743
YV M N+YA+K +W+K AE+RK MR++ V KE GFSW+DVG+ S L + GFSSGD SH
Sbjct: 680 YVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGS-LTMQGFSSGDKSH 739
Query: 744 PQSGEICRMAEYMGAEMKFQ 762
P+S EI RM E +G EM +
Sbjct: 740 PKSDEIYRMVEIIGLEMNLE 758
BLAST of HG10008034 vs. TAIR 10
Match:
AT2G27610.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 437.6 bits (1124), Expect = 2.2e-122
Identity = 241/738 (32.66%), Postives = 408/738 (55.28%), Query Frame = 0
Query: 32 YNLFDQSPPPNAASTNRVLLNYLHRDEAIQSLRFFKKQIRWGLDGNADELTLALALKACC 91
+NLFD+SP + S +L + ++ R F R G++ + + L + A
Sbjct: 47 HNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATL 106
Query: 92 GLPKLGRQIHGFVISSGLVSHITVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSWNTIL 151
GRQ+H I G + ++V SL++ Y K + VF+ + + ++V+W T++
Sbjct: 107 CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLI 166
Query: 152 SGFQK---SENALSFAVRMNLNGVKFDPVTYTTTLAFCLDGEDFLFGWQLHTLALKCGFK 211
SG+ + ++ L+ +RM G + + T+ L + G Q+HT+ +K G
Sbjct: 167 SGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 212 GDVFVGNALITMYSRWEHLVDARQVFDEMWSRDRVSWSAMITGYAQEGGHGLEAISVFVQ 271
+ V N+LI +Y + ++ AR +FD+ + V+W++MI+GYA G LEA+ +F
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA-ANGLDLEALGMFYS 286
Query: 272 MVREGVKFDNVAITGALSVCGHERNLELGKQIHCLTVKTGYETHTSVGNVLISMYSKCEI 331
M V+ + + +C + + L +Q+HC VK G+ ++ L+ YSKC
Sbjct: 287 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 346
Query: 332 IEDAKAAFKLIK-DRNVISWTTMLSLY-----EEDAVSLFNKMRLDGVYPNDVTFIGLLH 391
+ DA FK I NV+SWT M+S + +E+AV LF++M+ GV PN+ T+ +L
Sbjct: 347 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 406
Query: 392 AITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYAKFESIQDASRVFMELPYREIIS 451
A+ + E VH +K ++ +VG +L+ Y K +++A++VF + ++I++
Sbjct: 407 ALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 466
Query: 452 WNALISGYAQNALCQEALETFLYAIMES-KPNEYTFGSVLNAISAGEGISIKHGQRCHSH 511
W+A+++GYAQ + A++ F KPNE+TF S+LN + A S+ G++ H
Sbjct: 467 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN-VCAATNASMGQGKQFHGF 526
Query: 512 LIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSERSQFAWTALISAYAQHGDYDLV 571
IK L+ +S ALL MYAK+G+I+ ++ VF E+ +W ++IS YAQHG
Sbjct: 527 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 586
Query: 572 MKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFFDMMIKDHMIEPAGEHYSCMVD 631
+ +F+EM+K K+K D V F+ V AC+ +V+ G ++FD+M++D I P EH SCMVD
Sbjct: 587 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 646
Query: 632 MLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGNLEMAERMANALMKEEPMESGS 691
+ RAG+LE A +++ +P G + +++L ACR+H E+ A ++ +P +S +
Sbjct: 647 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAA 706
Query: 692 YVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVDVGNFGASNLYLHGFSSGDVSH 751
YVL+SN+YA+ GDW++ A++RK M ER VKKE G+SW++V N + F +GD SH
Sbjct: 707 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN------KTYSFLAGDRSH 766
Query: 752 PQSGEICRMAEYMGAEMK 760
P +I E + +K
Sbjct: 767 PLKDQIYMKLEDLSTRLK 772
BLAST of HG10008034 vs. TAIR 10
Match:
AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 432.2 bits (1110), Expect = 9.1e-121
Identity = 254/725 (35.03%), Postives = 391/725 (53.93%), Query Frame = 0
Query: 34 LFDQSPPPNAASTNRVLLNYLHRDEAIQSLRFFKKQIRWGLDGNADELTLALALKACCGL 93
LF + P+ + N ++ + R ++ +F + + L L+
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 94 PKLGRQIHGFVISSGLVSHITVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSWNTILSG 153
LG +H I GL S+I V +SL++MY K ++E A VFE L + + V WN ++ G
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 154 FQ---KSENALSFAVRMNLNGVKFDPVTYTTTLAFCLDGEDFLFGWQLHTLALKCGFKGD 213
+ +S + + M +G D T+T+ L+ C D G Q H++ +K +
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 214 VFVGNALITMYSRWEHLVDARQVFDEMWSRDRVSWSAMITGYAQEGGHGLEAISVFVQMV 273
+FVGNAL+ MY++ L DARQ+F+ M RD V+W+ +I Y Q+ EA +F +M
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENES-EAFDLFKRMN 522
Query: 274 REGVKFDNVAITGALSVCGHERNLELGKQIHCLTVKTGYETHTSVGNVLISMYSKCEIIE 333
G+ D + L C H L GKQ+HCL+VK G + G+ LI MYSKC II+
Sbjct: 523 LCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIK 582
Query: 334 DAKAAFKLIKDRNVISWTTMLSLYE----EDAVSLFNKMRLDGVYPNDVTFIGLLHAITI 393
DA+ F + + +V+S +++ Y E+AV LF +M GV P+++TF ++ A
Sbjct: 583 DARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHK 642
Query: 394 RGMVEQGLIVHGLCIKADFVSELS-VGNSLITMYAKFESIQDASRVFMELPY-REIISWN 453
+ G HG K F SE +G SL+ MY + +A +F EL + I+ W
Sbjct: 643 PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWT 702
Query: 454 ALISGYAQNALCQEALETFLYAIMES-KPNEYTFGSVLNAISAGEGISIKHGQRCHSHLI 513
++SG++QN +EAL+ + + P++ TF +VL S S++ G+ HS +
Sbjct: 703 GMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS--SLREGRAIHSLIF 762
Query: 514 KVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSERSQ-FAWTALISAYAQHGDYDLVM 573
+ + D + S L+DMYAK G ++ S +VF+E RS +W +LI+ YA++G + +
Sbjct: 763 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDAL 822
Query: 574 KLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFFDMMIKDHMIEPAGEHYSCMVDM 633
K+F+ M + I PD + FL VLTACS V GR+ F+MMI + IE +H +CMVD+
Sbjct: 823 KIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDL 882
Query: 634 LGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGNLEMAERMANALMKEEPMESGSY 693
LGR G L++A++ + P SLLGACRIHG+ E A L++ EP S +Y
Sbjct: 883 LGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAY 942
Query: 694 VLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVDVGNFGASNLYLHGFSSGDVSHP 748
VL+SN+YA +G WEK +RK MR+RGVKK G+SW+DV H F++GD SH
Sbjct: 943 VLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDV------EQRTHIFAAGDKSHS 998
BLAST of HG10008034 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 425.2 bits (1092), Expect = 1.1e-118
Identity = 246/698 (35.24%), Postives = 395/698 (56.59%), Query Frame = 0
Query: 74 LDGNADELTLALALKACCGLPKLGRQIHGFVISSGLVSHITVSNSLMNMYCKSGQLERAF 133
+ N E AL L+ C L +L RQI V +GL L++++C+ G ++ A
Sbjct: 31 IPANVYEHPAALLLERCSSLKEL-RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAA 90
Query: 134 SVFENLHDPDIVSWNTILSGFQK---SENALSFAVRMNLNGVKFDPVTYTTT--LAFCLD 193
VFE + V ++T+L GF K + AL F VRM + V +PV Y T L C D
Sbjct: 91 RVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV--EPVVYNFTYLLKVCGD 150
Query: 194 GEDFLFGWQLHTLALKCGFKGDVFVGNALITMYSRWEHLVDARQVFDEMWSRDRVSWSAM 253
+ G ++H L +K GF D+F L MY++ + +AR+VFD M RD VSW+ +
Sbjct: 151 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTI 210
Query: 254 ITGYAQEGGHGLEAISVFVQMVREGVKFDNVAITGALSVCGHERNLELGKQIHCLTVKTG 313
+ GY+Q G + A+ + M E +K + I L R + +GK+IH +++G
Sbjct: 211 VAGYSQNGMARM-ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 270
Query: 314 YETHTSVGNVLISMYSKCEIIEDAKAAFKLIKDRNVISWTTMLSLY-----EEDAVSLFN 373
+++ ++ L+ MY+KC +E A+ F + +RNV+SW +M+ Y ++A+ +F
Sbjct: 271 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 330
Query: 374 KMRLDGVYPNDVTFIGLLHAITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYAKFE 433
KM +GV P DV+ +G LHA G +E+G +H L ++ +SV NSLI+MY K +
Sbjct: 331 KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK 390
Query: 434 SIQDASRVFMELPYREIISWNALISGYAQNALCQEALETFLYAIMES-KPNEYTFGSVLN 493
+ A+ +F +L R ++SWNA+I G+AQN +AL F + KP+ +T+ SV+
Sbjct: 391 EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 450
Query: 494 AISAGEGISIKHGQR-CHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSERS 553
AI+ +SI H + H +++ L+ + ++ AL+DMYAK G+I ++ +F+ SER
Sbjct: 451 AIAE---LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH 510
Query: 554 QFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRFFD 613
W A+I Y HG ++LFEEM+K IKP+ V FLSV++ACS + +V+ G + F
Sbjct: 511 VTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFY 570
Query: 614 MMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIHGNL 673
MM +++ IE + +HY MVD+LGRAGRL +A + + ++P P ++ ++LGAC+IH N+
Sbjct: 571 MMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNV 630
Query: 674 EMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSWVDV 733
AE+ A L + P + G +VL++N+Y WEKV ++R M +G++K G S V++
Sbjct: 631 NFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEI 690
Query: 734 GNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMK 760
N +H F SG +HP S +I E + +K
Sbjct: 691 KN------EVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
BLAST of HG10008034 vs. TAIR 10
Match:
AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 409.1 bits (1050), Expect = 8.2e-114
Identity = 245/761 (32.19%), Postives = 406/761 (53.35%), Query Frame = 0
Query: 33 NLFDQSPPPNAASTNRVLLNYLHRDEAIQSLRFFKKQIRWGLDGNADELTLALALKACCG 92
+ F+ P + S N +L YL E+++S+ F R G++ D T A+ LK C
Sbjct: 135 SFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE--FDGRTFAIILKVCSF 194
Query: 93 L--PKLGRQIHGFVISSGLVSHITVSNSLMNMYCKSGQLERAFSVFENLHDPDIVSWNTI 152
L LG QIHG V+ G + + +++L++MY K + + VF+ + + + VSW+ I
Sbjct: 195 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 254
Query: 153 LSGFQKS---ENALSFAVRMNLNGVKFDPVTYTTTLAFCLDGEDFLFGWQLHTLALKCGF 212
++G ++ AL F M Y + L C + G QLH ALK F
Sbjct: 255 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 314
Query: 213 KGDVFVGNALITMYSRWEHLVDARQVFDEMWSRDRVSWSAMITGYAQEGGHGLEAISVFV 272
D V A + MY++ +++ DA+ +FD + +R S++AMITGY+QE HG +A+ +F
Sbjct: 315 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQE-EHGFKALLLFH 374
Query: 273 QMVREGVKFDNVAITGALSVCGHERNLELGKQIHCLTVKTGYETHTSVGNVLISMYSKCE 332
+++ G+ FD ++++G C + L G QI+ L +K+ V N I MY KC+
Sbjct: 375 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 434
Query: 333 IIEDAKAAFKLIKDRNVISWTTMLSLYEE-----DAVSLFNKMRLDGVYPNDVTFIGLLH 392
+ +A F ++ R+ +SW +++ +E+ + + LF M + P++ TF +L
Sbjct: 435 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 494
Query: 393 AITIRGMVEQGLIVHGLCIKADFVSELSVGNSLITMYAKFESIQDASRVFMELPYRE--- 452
A T G + G+ +H +K+ S SVG SLI MY+K I++A ++ R
Sbjct: 495 ACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 554
Query: 453 -----------------IISWNALISGYAQNALCQEALETFLYAI-MESKPNEYTFGSVL 512
+SWN++ISGY ++A F + M P+++T+ +VL
Sbjct: 555 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 614
Query: 513 NAIS--AGEGISIKHGQRCHSHLIKVGLNFDPIISGALLDMYAKRGSIQESQRVFNETSE 572
+ + A G+ G++ H+ +IK L D I L+DMY+K G + +S+ +F ++
Sbjct: 615 DTCANLASAGL----GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLR 674
Query: 573 RSQFAWTALISAYAQHGDYDLVMKLFEEMEKEKIKPDAVIFLSVLTACSRNRMVDMGRRF 632
R W A+I YA HG + ++LFE M E IKP+ V F+S+L AC+ ++D G +
Sbjct: 675 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEY 734
Query: 633 FDMMIKDHMIEPAGEHYSCMVDMLGRAGRLEDAEEMLARIPGGPGISALQSLLGACRIH- 692
F MM +D+ ++P HYS MVD+LG++G+++ A E++ +P ++LLG C IH
Sbjct: 735 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHR 794
Query: 693 GNLEMAERMANALMKEEPMESGSYVLMSNLYAQKGDWEKVAEMRKGMRERGVKKEIGFSW 752
N+E+AE AL++ +P +S +Y L+SN+YA G WEKV+++R+ MR +KKE G SW
Sbjct: 795 NNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSW 854
Query: 753 VDVGNFGASNLYLHGFSSGDVSHPQSGEICRMAEYMGAEMK 760
V++ + LH F GD +HP+ EI + +EMK
Sbjct: 855 VELKD------ELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038878735.1 | 0.0e+00 | 93.64 | pentatricopeptide repeat-containing protein At4g32430, mitochondrial isoform X1 ... | [more] |
| XP_022927123.1 | 0.0e+00 | 88.93 | pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Cucurbita ... | [more] |
| XP_038878737.1 | 0.0e+00 | 90.33 | pentatricopeptide repeat-containing protein At4g32430, mitochondrial isoform X2 ... | [more] |
| KAG7021814.1 | 0.0e+00 | 88.93 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
| XP_023531439.1 | 0.0e+00 | 88.42 | pentatricopeptide repeat-containing protein At4g32430, mitochondrial [Cucurbita ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q84MA3 | 2.0e-237 | 53.92 | Pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Arabidop... | [more] |
| Q9ZUW3 | 3.0e-121 | 32.66 | Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX... | [more] |
| Q9SS83 | 1.3e-119 | 35.03 | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... | [more] |
| Q3E6Q1 | 1.6e-117 | 35.24 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
| Q9FWA6 | 1.2e-112 | 32.19 | Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1EK48 | 0.0e+00 | 88.93 | pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Cucurbit... | [more] |
| A0A5D3DTC6 | 0.0e+00 | 89.44 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A6J1KH73 | 0.0e+00 | 88.30 | pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Cucurbit... | [more] |
| A0A5A7TTA5 | 0.0e+00 | 89.06 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3BA52 | 0.0e+00 | 89.06 | pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Cucumis ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G32430.1 | 1.4e-238 | 53.92 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT2G27610.1 | 2.2e-122 | 32.66 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G09040.1 | 9.1e-121 | 35.03 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G11290.1 | 1.1e-118 | 35.24 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G02330.1 | 8.2e-114 | 32.19 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
