HG10007972 (gene) Bottle gourd (Hangzhou Gourd) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCATTATGATTTTCATGGATCCTCATCTCAACCCACATCCCATTAAGTTTCTTAAACTGTATGATTTCTCAAGCTTTAATGGTGAAGAAGCCGATGAATCAGATAGAGGGTGTAAGATTTGGAAGAAGGTCAACAAGTTTATAAAGAAGAAGGAGGCTACTTTGCTTGGTAGGTTCCAATGACATAGATTTGGAACTTAGATTAGGGTTTTAATTACTTAACATTTTGGCTCTAACTACCAATGACTTCATGATGATTTTCCTAAATGAGTGTTATTTAATATATTTTGTTGTAATCGTTATGGTAATTTTGTTTAATTTTTTCTAGCACAATCACCAGTGCCACCACCCGCCCAGAGCACAAGTATAGAAAACCATTTGAAAGAGTAATGCAACATTAAGAAAAATGGAAGTCCAAGTAGAACAGTTAGTAAATGAAATCAAGAATAGGCCAGCAGGAACCTTGCCAAGCACTATAAAAGTCCACAACAAAGTAGCAAAGAGCAGTGCAAAGAGACCACGTTACAAAGCGGTTTGGAATGTGAAGACCCTAGCCCACCAATTGAACAGGAACAGCAGGAGTCTGAAAAAGAAGATGAAATAAAGAAATCAACATCTGAATGTCAACAAAAGGTTGTGGAAGAAAAGAAACCAAAAAGAAAGATAAAGAAGAGGCACAGGTAAGTTTGAAGGATAAAAAAGCAGTGCCAGTTACCAACCACCAATCCCATTTTTGAAAAGACCCAAAAGAGCCAGCTAGGATACACAATTCAAGAAATTCCTTGACGCGTTGAAACAACTTCACATAAACATCCCGTTAGTAGAAGATTTAAAAAGGATGCCAAATTATATCAAGTTCTTGAAAGATATTCTGTCGAAAAAGAGAAAGCCCCCAGAATACAAAACAATTGCACTAACTGAATGTTGCAGTGCAGTTGTGAGCAGTAAGATTCTCCCAAAACTGAAGGATCTAGGGAGTTTTACAATTTCATGTTTAATTGAAGGGAGAGTCTGGAAAAAACTTTGTGTGACTTGGGAGCCAGCATCGATTTGATGTCACATTCAGTCTTTGTGCAACTAGGGATCAGTGAAGTGAAGCCAACTACAGTAACATTATAGCTTGTAGATTGTTGAATCACCTGACCAATAAGAAAAATTGAAACATATTAGTAAAAGTGGATAAATTTGTATTTCCAACTTATTTCATAATTTTAGACTATAAAGCAGATAAAGAAGTGCCAATTATTTTAGGAAGACCTTTTCTTGCAACTGAAAGGACACTAATTGATGTGCAAAAAGGAGAACTAACCATGAGAGTAAACGATCGACAGATCACATTCAATGCTCTCAAATTTCCAAGTGACATAAAAAAGTATTTGTTTCTTGAAGATACTAATAAATATAATTGTTTCCCAATATGTAGGAGTTGTTAAATGTGGGTTTGGAAGAATTTTCACAAGAAAGTAACAAGGAAGAATGATTCACGCCATGAAATGCATGGAATTAAGCTTTTATTTAGGCATTTTTATTGTGAAAAATAGGTTCTTGTATGAATTTTATCCCAACTTTTGTCTTAATATGTTTAAATGAGCTTATTGAGGCTTACTTATGCTTAAAATATGTTATTTGCGGATTTGGTGTTGATCGGTTACATTTCTGACAGATTTCTGGCTGTTTTTCATGTGAATTGCCTACAGTAGTAAGTGGTGTACCAGCACTGTCGAGCCCTAAAATTCCAGAATATGAACCAGTCAAGAACAGTTGCGATTTTCACGATTTTAACGACTGGGTACCTTCGATTTTGCTTGGTAAACCTTCAAAACACAAATCTCAGCTCTCCTCAATCGTTTTGGGGCCTTTAAAAGGCTAAGAACCTCTCCATTTCGAAAGACACAACTCTCCATCGCTGAAGCCATCACTCTTTTCACCATTTATCTGTCATTTTTCCAGCACATCAGGGTTCTTCTCAAAGTTTCAAGTCAGTAACCTTAAGAACAAAGTTCCTCTAAGGCGTAGCGGCTCTAGGATTTCTCTTCCCACAGAAGTGTGTGTCGATGCACGATTCTTTCTTGAAAGAGGAGGAATCATCCTAGGAAAAGACTTGTCACTTGAGGATTTGCCCAAGTTCTCTTGAGTTGTATTTATTTTCCAGCATTACTTTATTTGTTAATTTTTCATTTAATTTCTATCGATCAAACTCCTCATTGTAGCTAAGATTTATGATTTAATAAAGATGATTATTTTATCAAAAGTCATGAGCTAAATATTTTTTTTAAGGGTTTAGCAATGTGAAAACCTTAGGGTTGTTATGGTTTAGGTTATGTACATTTCATACCACTTTGTCTAGACACATTCTCTTTGTTGATTTAAAAGTTAAAATTGGTAAGTTAAACTAGCCATTTAAATTAAGGATCTAGCAGAGCTCTAATGCTTAGAAGGTTAAGGTGTAACCAGATGTCATAAAGGGATATGAGACTAAGAGCCTAGACATAGGATTGCCACGTCACCTTAGAAATAATGGATACCATAGGATAAAAGAACTGAACTTGAATTAATATAAGATCTAACTAACCATGGAAACATTAGGCATTAGCTGCTTAGAACTTATAAAGGAACTTAACACAAGACCGAATAGGTGTAGCTTCCTGTTCATGTGTAATTCATTGTTTCGGTATGATGTGGTCACATCCGCTAAGTCACAACACCCAAATGATTGTAGCATTATTTTCCCCTGTTTGATTACCATTGTTTATTGCTTTAAGTTTTCTTTCACTTTTTCATTAGTTACCTTGGTTTCATTGGTCCATAGTCATCACTCTTTTCACCCTTTTTATGTCATTTTCACAGCACCTTGGGGTTTTTCTCAAAGTTTCAAGCTAGTAGCCTTAAGAACGAAAGTTCCTCTAAGGCGTAGCAACTCTAGGATTTCTCTTCCCACAGAAGTGTGTGTCTTAAGAAAATCTAAAATATTCCTATATATTTTTAAATAATTAAATAATTAATATTCAATGAGGTAATTTAATAGGCTGACCCAACTTAATCCGAGCTCGACCCAAACTTTGATTCAAATAGTCAAACCCAAGGGTTAGGTCATGGGCTTGGTTATTGAAGGTTGGACAAGCTCGATCCAAGCCCAAACAATGTCTTAGGCCCTTGAGCTTAGGCCTGGATCGAGCTTAAGCCTTCACTTTTTAGAGTTGGGCAGTTCAATGATGAGGGTGAAGTGTGGAAAGGGGAAAGGGAGAGAGGGAGTGAGAGAGTGGGGGTGAGGGGAGGGGAGGTGAGAGGGAGAGGGAGAGCTAAAAAATGATAAATAATAAAATATCAAAGAAGAGTTAAACGCGCCATAAATTAAAATTATCAAAATTAAAAATTCAATAACTTATTAACACTTTTGAAAGTTCAAGCACCAAATAGAAATAAAATGTCAAAGTTCAGTAATTAAATATTAGATAAACATGGTTTTCCATCTTAAACCCAATACTTAAAATTTAAGTTAAATTGCAAGTTTAGTACACTTTTAAAACTTTAGGGCATGTATTTTTAGTACAAATGGGGGTGAAAAATTTGAACACGGACCTCTGGGTTCTTAGCACATATTGATGCTAGTTGAGTTAAGCTCTTTTTGGCAAAAGTTTATAGCATGTTTGATTGATAAATTGGATTTTGTTTTATGTTTTCCCGGCTTGACTTTAGCAAATATATGTTTGGAAGACAAACTAGAGTCAAAAACTATTTTCAGAGTTGTAATTTAACCTAAAAATATATATCTTTATTAGTAGACCCTCAAACTCACACCCAACCTAAATACAATGGCAAAGAGACCAAAATGCTCTCCAATTTTTCACTAAACACATAAAAAAAGAATATAAAAACCATTTATATATATATAAATGACATAAGATTATATATATGTCATTTATATAACTGTTTACACCTATATAACTCTAGGTGTAAACAGGTAAAAAATAATGACATAAGATTCGAAAAACGCAGAGCAGAGGCAAAAACTGGGAGATTTGGTATCAGCGTATCGGGTCCATTCAAAATAAACCTATAAAACGGGCCATATTATGTTATTTCTGATAAGGCACAAGCAAGAGCCGCGTCAGGATCTCGATAATTTGGGCCTTAATTCCGGCCCCACAATCCCCTTATTCTCTCAACATCACTGTCTCACATGTCTACCCTGCCTACCATTTTTCCCCCCTTCGAATCTTTTTTTTTTCTTTTAATTATTCATATTCTTATTATTATTATGTTCTAAAACTAATAATTGTAACAAACATTACATTATGGGGGTAAAAATAATTCTGATATGTCGAGTACTATGTTGCCTGCCCCTTATTCAGGGAAAAATAATTGAAGACATTGTTCGTGCACTGGACAAAAAAAAAAAGGAAAGTAAAAAAGTGAAAATTATTGAAATGACATCGAACTAAAAATGTGGGGATGGATATGACAAATAATAATAATTAATATTTGAATTAATTGCCTATGAAGCCCTCTATTTAATTAGCCCACCCGCAGTACTTCCACTTCATTTGTCCTACGGGTCATGGTCGTCACCGTCGTCGGCCTACCTTTGACGACGGCGGAGAAACCGGCGGAGGAAACGCTGTTTGCTGGTGCTTAAGCGTCTCAAAACTCGATGCTATATCCTTAGACGATGTATCTTCATGCTATTGTGCTGGCACGACGACGCCGTTTCGGATTAGTGATGAACGGTTCTGAATGATCATTATGATTTTCATGGATCCTCATCTCAACCCACATCCCATTAAGTTTCTTAAACTGTATGATTTCTCAAGCTTTAATGGTGAAGAAGCCGATGAATCAGATAGAGGGTGTAAGATTTGGAAGAAGGTCAACAAGTTTATAAAGAAGAAGGAGGCTACTTTGCTTGCCCACCCGCAGTACTTCCACTTCATTTGTCCTACGGGTCATGGTCGTCACCGTCGTCGGCCTACCTTTGACGACGGCGGAGAAACCGGCGGAGGAAACGCTGTTTGCTGGTGCTTAAGCGTCTCAAAACTCGATGCTATATCCTTAGACGATGTATCTTCATGCTATTGTGCTGGCACGACGACGCCGTTTCGGATTAGTGATGAACGGTTCTGA ATGATCATTATGATTTTCATGGATCCTCATCTCAACCCACATCCCATTAAGTTTCTTAAACTGTATGATTTCTCAAGCTTTAATGGTGAAGAAGCCGATGAATCAGATAGAGGGTGTAAGATTTGGAAGAAGGTCAACAAGTTTATAAAGAAGAAGGAGGCTACTTTGCTTGCCCACCCGCAGTACTTCCACTTCATTTGTCCTACGGGTCATGGTCGTCACCGTCGTCGGCCTACCTTTGACGACGGCGGAGAAACCGGCGGAGGAAACGCTGTTTGCTGGTGCTTAAGCGTCTCAAAACTCGATGCTATATCCTTAGACGATGTATCTTCATGCTATTGTGCTGGCACGACGACGCCGTTTCGGATTAGTGATGAACGGTTCTGA MIIMIFMDPHLNPHPIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKKKEATLLAHPQYFHFICPTGHGRHRRRPTFDDGGETGGGNAVCWCLSVSKLDAISLDDVSSCYCAGTTTPFRISDERF Homology
BLAST of HG10007972 vs. NCBI nr
Match: XP_008465205.1 (PREDICTED: transcriptional regulator SUPERMAN [Cucumis melo] >KAA0057527.1 transcriptional regulator SUPERMAN [Cucumis melo var. makuwa] >TYK08208.1 transcriptional regulator SUPERMAN [Cucumis melo var. makuwa]) HSP 1 Score: 79.3 bits (194), Expect = 2.6e-11 Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of HG10007972 vs. NCBI nr
Match: XP_038875029.1 (transcriptional regulator TAC1-like [Benincasa hispida]) HSP 1 Score: 71.6 bits (174), Expect = 5.4e-09 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 0
BLAST of HG10007972 vs. NCBI nr
Match: XP_011650145.1 (zinc finger protein 3 [Cucumis sativus] >KGN61621.1 hypothetical protein Csa_006689 [Cucumis sativus]) HSP 1 Score: 71.6 bits (174), Expect = 5.4e-09 Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 0
BLAST of HG10007972 vs. NCBI nr
Match: KAG6593853.1 (Transcriptional regulator SUPERMAN, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026185.1 Transcriptional regulator SUPERMAN, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 55.8 bits (133), Expect = 3.1e-04 Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of HG10007972 vs. NCBI nr
Match: XP_022930268.1 (zinc finger protein 10-like [Cucurbita moschata]) HSP 1 Score: 55.8 bits (133), Expect = 3.1e-04 Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of HG10007972 vs. ExPASy TrEMBL
Match: A0A5D3CAK0 (Transcriptional regulator SUPERMAN OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00260 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.3e-11 Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of HG10007972 vs. ExPASy TrEMBL
Match: A0A1S3CPU8 (transcriptional regulator SUPERMAN OS=Cucumis melo OX=3656 GN=LOC103502868 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.3e-11 Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of HG10007972 vs. ExPASy TrEMBL
Match: A0A0A0LNQ1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G190780 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.6e-09 Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 0
BLAST of HG10007972 vs. ExPASy TrEMBL
Match: A0A6J1EUL3 (zinc finger protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111436773 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04 Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0
BLAST of HG10007972 vs. ExPASy TrEMBL
Match: A0A6J1KIV9 (transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111494862 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.5e-04 Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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