HG10007938 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007938
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr10: 17617124 .. 17620276 (-)
RNA-Seq Expression	HG10007938
Synteny	HG10007938

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCACAACACAAACTTTGGCCACTAGAAAACAATATTGGCTCGTTTACATGGAGCGGCTGCTTCTGCTGCTCGGCTTACATGCATCTTCCATCCATGCAAATGCACCGCCGTTGGCCGCTCCTCCTCCTTCCGCAAATGCTCATCTGAAGAGGTACCTATTCATCTCCTTTAGCTCGTTACTTGAACGCAATTTCAATTCTGACCCACTTCTCAAAACCTAGATGGGTGTGTTTGTGATCATCAATTTGATTGAACTGGATATAGATTTTCTGTTGTGGGTTTTGTATTTCATTTTTGGAAGTGTGGGTTTTGAAGAATTTGGTTGGAGATGCAAGAATTTGAACAGAATAGGGGTTTTGATTTGATTTGTCTTTTGGATTACAAGAAATCCCATTTGGGATTTTCTTGCTCTGCACTTGGTTCTTGATTCCTCTGGTGTTGTAATTGTAGATTTCATATTGGAGGAGCTTTATCTCCATTCATCTTCACTTATCCAGAGGCAGTGAAAGACGATGCTGTAATTTGTTGGGGTTTGGTGAATATTAGTTTTCTTTTGAGGCATGGTGACGGTGGGGCGAAAGTTTGATGAGTAGGTCAAGCAGAACTGAGTGAGTCTGGTCCAGCAAAAACCGGAGTTTTCATGGGTGTTCCTAAAGAGGGAACGATAGCAAGCAAAAATCTATCTCAGGGATCGCCAGAAATGGTACTGTGGCAAGCACTTGGACTATTATGATGTTTTCATTGTCAATGATAGAACAAAGTATGGTGTGTTTAAATGTTTTGACCACATAATCATTTAATTCACTGCCTTAACTTGGTAAATCATCTGCTTGGTTGGCTATGCTTGTAAAATCAGATGTTTCTTCTTTTAGTAACCTGTTCATTTACTGTTTGACGAGTCTGGTCCTTCCATTTGATTTCACCCAACAATTTGCTAGGTTGTCTTATATTGTGTCTGGGAATTTGGAGTTCTTTTCAACCTGCTATAACACTTTTCATGTTTTTCATTATGTTTCACCGTATATGAAGGTTTTTGTTTTTTTGAAAAACTGAATAACACTAAAAAAAATTCATAGTGATTTTTGGAAATATATTGAATGGATGTTTTCCTCATATTATTCAAACACTTCCAAAGTCTTCTGCTGTCATCCTCAGAGTTGTAGACCTTTTTCTTTCACTGTATTATGAACACGGTTCGTGGTATCCTTTTGTTTGTTGAAATTTGTACTTTTGAACTTTGCAGGAATCATGTCTCCAGAAGAATCAAGTAAAGTTAGTCTCGACTCCAGTCGATTCACAAATTCAATCCCGTTGTCTTTTATGTTTGGGTAACAATAGCTGCCGAACCGTACGTTCAAGAACAAAGCTAATGAACATCTTGATTGAAAGAGGGAAGCCTCAAGAAGCTCAATTCATTTTCGATAGTTTAGTAGAACAAGGACACAGGCCAACTACTGTGACATACACAGCTCTTGTAGCTGCTCTGACTCGGCAGAAGCGTTTCAAGGCCATTTCAGGACTTCTATCAGAAATGGAAGAAACTGGCATTAAACCTGATTCCATACTCTTCAATGCCATAATCAATGCCTTTTCTGAATCTGGCAATGTAGAAGAGGCCATGAAAACTTTTCAGAAAATGGAGGAGAGTCGATGTAAGCCAACAACTAGCACTTTTAATACACTTATCAAAGGCTATGGAATCATCCGTAAACCTGAAGAGTCTATGAAGTTATTAGAATTAATGATGAGGACCACAAATCTCAAACCCAATACCAGAACTTATAATATCCTTGTTGGAGCTTATTGTAAGAAGAAAAATTTAAAGGAGGCATGGAATGTAGTGCATCAGATGATTGCATCTGGAGTTCAACCTGATGTTGTCACATATAACACATTGGCAAGGGCATATGCTCAGGATGGGGAGACTAGCAAGGCAGAAAGTATAATAGTGGAAATGCAAAACAACAAGGTAAATCCCAATGAGAGGACGTGTGGAATAATCGTAGGTGGTTATTGTGAACAGGGGAACTTGGCTGAGGCTCTAAGGGTTGTCTATCGAATGAGGGATCTCGGAATACACCCAAACCTTGTTATTTTCAACTCTCTTATCAAGGGCTTCCTAGATGTTGGAGACTCGGATGGAGTTGATGAGGTACAGTATTTTTCATATTTTCGCCATTTATTTTCTACATCTATTTTGTGTGATTGTCGAGTTCCCCCCTTGTTGGTGAACTTTCTCTCCTTCTGAAGTGCTTGTTGATCACATGGATAATGATTATAAACTTGAGCAGGCATTGACAATGATGGAAGAATCTGGGGTAAAACCAGATGTGATAACATTTAGCACCATTATGAATGGTTGGAGCTCAGCTGGACGTATGGACAAATGCCAAGAAATCTTTGAAGACATGGTGAAATCTGGCATTGAACCTGATATCCATGTTTTCAGCATTCTAGCAAAAGGGTTTGTCCGTGCTGGTGAACCTGTGAAGGCTGAGTCCCTGCTAAACTCCATGAGCAAATATGGAGTGAGACCCAACGTCGTGATTTACACAACTATAATTAGCGGTTGGTGCAGTGCAGGTAAAATGGAGAAGGCATGGAGGGTTTTTGAGCGTATGTGTGCCATGGATGTGTCCCCCAATTTGAAAACCTTTGAGACCTTAATATGGGGCTACGGAGAAGCCAAGCAGCCATGGAGAGCAGAAGAGATCCTTCAAATGATGGAAGAAAAGAATGTCGTTCCCGAAGACAGCACTCTCAAGCTTGTATCCGAAGCTTGGCGCTCAATCGGTATGGCTAATGAAGCCATGGCTGAAAGAACGGAGGGCAATGGAATTCCAGAGACAAGTTCAGAGAGAATTCACAAGGAGGACCCACCTGCATCTTATTCTGATCTTCTTCAATCAGAAATAGTGATCATATCTAACGGTAATGGATCTTCTTATTCCCAAACAAAAAGCAGGACACTCCCAAAAGGAGTTGAAGTATCATCTGGACGTCCACGGAGCACCTCTACATCGATGCTCCTTCGTCAGGCACGTCCCTCTCGTCCGCTGATCCTGTGCCGTATCCAGAGCCAAACCCAGTTTTGGATATGGAGGCAGCATGCTGCTACAACTTGCAGAATGATGTTCATCCATTAG

mRNA sequence

ATGGATTTCACAACACAAACTTTGGCCACTAGAAAACAATATTGGCTCGTTTACATGGAGCGGCTGCTTCTGCTGCTCGGCTTACATGCATCTTCCATCCATGCAAATGCACCGCCGTTGGCCGCTCCTCCTCCTTCCGCAAATGCTCATCTGAAGAGATTTCATATTGGAGGAGCTTTATCTCCATTCATCTTCACTTATCCAGAGGCAGTGAAAGACGATGCTGTAATTTGTTGGGGTTTGGTGAATATTAGTTTTCTTTTGAGGCATGGTGACGGTGGGGCGAAAGAATCATGTCTCCAGAAGAATCAAGTAAAGTTAGTCTCGACTCCAGTCGATTCACAAATTCAATCCCGTTGTCTTTTATGTTTGGGTAACAATAGCTGCCGAACCGTACGTTCAAGAACAAAGCTAATGAACATCTTGATTGAAAGAGGGAAGCCTCAAGAAGCTCAATTCATTTTCGATAGTTTAGTAGAACAAGGACACAGGCCAACTACTGTGACATACACAGCTCTTGTAGCTGCTCTGACTCGGCAGAAGCGTTTCAAGGCCATTTCAGGACTTCTATCAGAAATGGAAGAAACTGGCATTAAACCTGATTCCATACTCTTCAATGCCATAATCAATGCCTTTTCTGAATCTGGCAATGTAGAAGAGGCCATGAAAACTTTTCAGAAAATGGAGGAGAGTCGATGTAAGCCAACAACTAGCACTTTTAATACACTTATCAAAGGCTATGGAATCATCCGTAAACCTGAAGAGTCTATGAAGTTATTAGAATTAATGATGAGGACCACAAATCTCAAACCCAATACCAGAACTTATAATATCCTTGTTGGAGCTTATTGTAAGAAGAAAAATTTAAAGGAGGCATGGAATGTAGTGCATCAGATGATTGCATCTGGAGTTCAACCTGATGTTGTCACATATAACACATTGGCAAGGGCATATGCTCAGGATGGGGAGACTAGCAAGGCAGAAAGTATAATAGTGGAAATGCAAAACAACAAGGTAAATCCCAATGAGAGGACGTGTGGAATAATCGTAGGTGGTTATTGTGAACAGGGGAACTTGGCTGAGGCTCTAAGGGTTGTCTATCGAATGAGGGATCTCGGAATACACCCAAACCTTGTTATTTTCAACTCTCTTATCAAGGGCTTCCTAGATGTTGGAGACTCGGATGGAGTTGATGAGGCATTGACAATGATGGAAGAATCTGGGGTAAAACCAGATGTGATAACATTTAGCACCATTATGAATGGTTGGAGCTCAGCTGGACGTATGGACAAATGCCAAGAAATCTTTGAAGACATGGTGAAATCTGGCATTGAACCTGATATCCATGTTTTCAGCATTCTAGCAAAAGGGTTTGTCCGTGCTGGTGAACCTGTGAAGGCTGAGTCCCTGCTAAACTCCATGAGCAAATATGGAGTGAGACCCAACGTCGTGATTTACACAACTATAATTAGCGGTTGGTGCAGTGCAGGTAAAATGGAGAAGGCATGGAGGGTTTTTGAGCGTATGTGTGCCATGGATGTGTCCCCCAATTTGAAAACCTTTGAGACCTTAATATGGGGCTACGGAGAAGCCAAGCAGCCATGGAGAGCAGAAGAGATCCTTCAAATGATGGAAGAAAAGAATGTCGTTCCCGAAGACAGCACTCTCAAGCTTGTATCCGAAGCTTGGCGCTCAATCGGTATGGCTAATGAAGCCATGGCTGAAAGAACGGAGGGCAATGGAATTCCAGAGACAAGTTCAGAGAGAATTCACAAGGAGGACCCACCTGCATCTTATTCTGATCTTCTTCAATCAGAAATAGTGATCATATCTAACGGTAATGGATCTTCTTATTCCCAAACAAAAAGCAGGACACTCCCAAAAGGAGTTGAAGTATCATCTGGACGTCCACGGAGCACCTCTACATCGATGCTCCTTCGTCAGGCACGTCCCTCTCGTCCGCTGATCCTGTGCCGTATCCAGAGCCAAACCCAGTTTTGGATATGGAGGCAGCATGCTGCTACAACTTGCAGAATGATGTTCATCCATTAG

Coding sequence (CDS)

ATGGATTTCACAACACAAACTTTGGCCACTAGAAAACAATATTGGCTCGTTTACATGGAGCGGCTGCTTCTGCTGCTCGGCTTACATGCATCTTCCATCCATGCAAATGCACCGCCGTTGGCCGCTCCTCCTCCTTCCGCAAATGCTCATCTGAAGAGATTTCATATTGGAGGAGCTTTATCTCCATTCATCTTCACTTATCCAGAGGCAGTGAAAGACGATGCTGTAATTTGTTGGGGTTTGGTGAATATTAGTTTTCTTTTGAGGCATGGTGACGGTGGGGCGAAAGAATCATGTCTCCAGAAGAATCAAGTAAAGTTAGTCTCGACTCCAGTCGATTCACAAATTCAATCCCGTTGTCTTTTATGTTTGGGTAACAATAGCTGCCGAACCGTACGTTCAAGAACAAAGCTAATGAACATCTTGATTGAAAGAGGGAAGCCTCAAGAAGCTCAATTCATTTTCGATAGTTTAGTAGAACAAGGACACAGGCCAACTACTGTGACATACACAGCTCTTGTAGCTGCTCTGACTCGGCAGAAGCGTTTCAAGGCCATTTCAGGACTTCTATCAGAAATGGAAGAAACTGGCATTAAACCTGATTCCATACTCTTCAATGCCATAATCAATGCCTTTTCTGAATCTGGCAATGTAGAAGAGGCCATGAAAACTTTTCAGAAAATGGAGGAGAGTCGATGTAAGCCAACAACTAGCACTTTTAATACACTTATCAAAGGCTATGGAATCATCCGTAAACCTGAAGAGTCTATGAAGTTATTAGAATTAATGATGAGGACCACAAATCTCAAACCCAATACCAGAACTTATAATATCCTTGTTGGAGCTTATTGTAAGAAGAAAAATTTAAAGGAGGCATGGAATGTAGTGCATCAGATGATTGCATCTGGAGTTCAACCTGATGTTGTCACATATAACACATTGGCAAGGGCATATGCTCAGGATGGGGAGACTAGCAAGGCAGAAAGTATAATAGTGGAAATGCAAAACAACAAGGTAAATCCCAATGAGAGGACGTGTGGAATAATCGTAGGTGGTTATTGTGAACAGGGGAACTTGGCTGAGGCTCTAAGGGTTGTCTATCGAATGAGGGATCTCGGAATACACCCAAACCTTGTTATTTTCAACTCTCTTATCAAGGGCTTCCTAGATGTTGGAGACTCGGATGGAGTTGATGAGGCATTGACAATGATGGAAGAATCTGGGGTAAAACCAGATGTGATAACATTTAGCACCATTATGAATGGTTGGAGCTCAGCTGGACGTATGGACAAATGCCAAGAAATCTTTGAAGACATGGTGAAATCTGGCATTGAACCTGATATCCATGTTTTCAGCATTCTAGCAAAAGGGTTTGTCCGTGCTGGTGAACCTGTGAAGGCTGAGTCCCTGCTAAACTCCATGAGCAAATATGGAGTGAGACCCAACGTCGTGATTTACACAACTATAATTAGCGGTTGGTGCAGTGCAGGTAAAATGGAGAAGGCATGGAGGGTTTTTGAGCGTATGTGTGCCATGGATGTGTCCCCCAATTTGAAAACCTTTGAGACCTTAATATGGGGCTACGGAGAAGCCAAGCAGCCATGGAGAGCAGAAGAGATCCTTCAAATGATGGAAGAAAAGAATGTCGTTCCCGAAGACAGCACTCTCAAGCTTGTATCCGAAGCTTGGCGCTCAATCGGTATGGCTAATGAAGCCATGGCTGAAAGAACGGAGGGCAATGGAATTCCAGAGACAAGTTCAGAGAGAATTCACAAGGAGGACCCACCTGCATCTTATTCTGATCTTCTTCAATCAGAAATAGTGATCATATCTAACGGTAATGGATCTTCTTATTCCCAAACAAAAAGCAGGACACTCCCAAAAGGAGTTGAAGTATCATCTGGACGTCCACGGAGCACCTCTACATCGATGCTCCTTCGTCAGGCACGTCCCTCTCGTCCGCTGATCCTGTGCCGTATCCAGAGCCAAACCCAGTTTTGGATATGGAGGCAGCATGCTGCTACAACTTGCAGAATGATGTTCATCCATTAG

Protein sequence

MDFTTQTLATRKQYWLVYMERLLLLLGLHASSIHANAPPLAAPPPSANAHLKRFHIGGALSPFIFTYPEAVKDDAVICWGLVNISFLLRHGDGGAKESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTSTFNTLIKGYGIIRKPEESMKLLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTLARAYAQDGETSKAESIIVEMQNNKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCSAGKMEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMANEAMAERTEGNGIPETSSERIHKEDPPASYSDLLQSEIVIISNGNGSSYSQTKSRTLPKGVEVSSGRPRSTSTSMLLRQARPSRPLILCRIQSQTQFWIWRQHAATTCRMMFIH

Homology

[Close]

BLAST of HG10007938 vs. NCBI nr
Match: KAA0046551.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK28707.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 585/666 (87.84%), Postives = 611/666 (91.74%), Query Frame = 0


Query: 19  MERLLLLLGLHASSIHANAPPLAAPPPSANAHLKRFHIGGALSPFIFTYPEAVKDDAVIC 78
           ME+LLLLL       HANAPP  A PP A A LKR HIGGALSPFIFTY  AVK  A+I 
Sbjct: 1   MEKLLLLL-----VFHANAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIIN 60

Query: 79  WGLVNISFLLRHGDGGAKESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKL 138
           W      FL+        ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKL
Sbjct: 61  W-----DFLM--------ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKL 120

Query: 139 MNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGI 198
           MNIL+ERGKPQEA+FIF+SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 
Sbjct: 121 MNILVERGKPQEAEFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGT 180

Query: 199 KPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTSTFNTLIKGYGIIRKPEESMK 258
           KPDSI  NAIINAFSESGNV+EAM+ FQKMEES CKPTTSTFNTLIKGYGIIRKPEESMK
Sbjct: 181 KPDSIFLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMK 240

Query: 259 LLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTLARAY 318
           LLELM RTTNLKPN RTYNILVGA CKKKN+KEAWNVVHQM+ASGVQPDVVTYNTLARAY
Sbjct: 241 LLELMTRTTNLKPNNRTYNILVGALCKKKNIKEAWNVVHQMLASGVQPDVVTYNTLARAY 300

Query: 319 AQDGETSKAESIIVEMQNNKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNL 378
           AQDGET+KAESIIVEM N KVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNL
Sbjct: 301 AQDGETNKAESIIVEMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNL 360

Query: 379 VIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFED 438
           VIFNSLIKGFLD+GDSDGVDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIF+D
Sbjct: 361 VIFNSLIKGFLDIGDSDGVDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDD 420

Query: 439 MVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCSAGK 498
           M+KSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKY V+PNVVI+TTIISGWC+AGK
Sbjct: 421 MLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYRVKPNVVIFTTIISGWCTAGK 480

Query: 499 MEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKL 558
           MEKAWRVFERMC MDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKL
Sbjct: 481 MEKAWRVFERMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKL 540

Query: 559 VSEAWRSIGMANEAMAERTEGNGIPETSSERIHKED-PPASYSDLLQSEIVIISNGNGSS 618
           VSEAWRSIGM N+AMA+RTE N IP  +SERIHKE+ PPASYS+LL+SEIVI+SNGNGSS
Sbjct: 541 VSEAWRSIGMVNDAMAQRTEDNEIPWRNSERIHKEEGPPASYSNLLKSEIVIVSNGNGSS 600

Query: 619 YSQTKSRTLPKGVEVSSGRPRSTSTSMLLRQARPSRPLILCRIQSQTQFWIWRQHAATTC 678
           YSQT+SRTLPKGVEV SGRPRSTSTSMLLRQ RPSRPLILC IQ+QTQFWIWRQHA TTC
Sbjct: 601 YSQTRSRTLPKGVEVPSGRPRSTSTSMLLRQTRPSRPLILCHIQNQTQFWIWRQHATTTC 648

Query: 679 RMMFIH 684
           RMMFIH
Sbjct: 661 RMMFIH 648

[Close]

BLAST of HG10007938 vs. NCBI nr
Match: XP_038878813.1 (pentatricopeptide repeat-containing protein At5g25630-like [Benincasa hispida])

HSP 1 Score: 1112.8 bits (2877), Expect = 0.0e+00
Identity = 555/587 (94.55%), Postives = 575/587 (97.96%), Query Frame = 0


Query: 97  ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFD 156
           ESCL+KNQVKLVSTPVDSQIQSRC+LCLGNNSCRTVRSRTKLMNIL+ERGKPQE QFIF+
Sbjct: 22  ESCLRKNQVKLVSTPVDSQIQSRCVLCLGNNSCRTVRSRTKLMNILVERGKPQEGQFIFN 81

Query: 157 SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESG 216
           SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG KPDSILFNAIINAFSESG
Sbjct: 82  SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGTKPDSILFNAIINAFSESG 141

Query: 217 NVEEAMKTFQKMEESRCKPTTSTFNTLIKGYGIIRKPEESMKLLELMMRTTNLKPNTRTY 276
           NV+EAM+TFQKMEE  CKPTTSTFNTLIKGYGIIRKPEESMKLLELMMRTTNLKPN RTY
Sbjct: 142 NVKEAMETFQKMEECGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMMRTTNLKPNNRTY 201

Query: 277 NILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTLARAYAQDGETSKAESIIVEMQN 336
           NILVGA+CKKKN+KEAWNVVHQMIASGVQPDVVTYNTLARAYAQDGETSKAESI+VEMQN
Sbjct: 202 NILVGAWCKKKNIKEAWNVVHQMIASGVQPDVVTYNTLARAYAQDGETSKAESILVEMQN 261

Query: 337 NKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDG 396
           NKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDL IHPNLVIFNSLIKGFLD+GDSDG
Sbjct: 262 NKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLRIHPNLVIFNSLIKGFLDIGDSDG 321

Query: 397 VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAK 456
           VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIF+DM+KSGIEPDIHVFSILAK
Sbjct: 322 VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAK 381

Query: 457 GFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCSAGKMEKAWRVFERMCAMDVSP 516
           GFVRAGEPVKAESLLNSMSKYGVRPNVVI+TTIISGWC+AGKMEKAWRVFERMC MDVSP
Sbjct: 382 GFVRAGEPVKAESLLNSMSKYGVRPNVVIFTTIISGWCTAGKMEKAWRVFERMCDMDVSP 441

Query: 517 NLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMANEAMAER 576
           NLKTFETLIWGYGEAKQPWRAE+ILQMMEEKNVVPEDSTLKLVSEAWRSIGM NEAMAER
Sbjct: 442 NLKTFETLIWGYGEAKQPWRAEKILQMMEEKNVVPEDSTLKLVSEAWRSIGMVNEAMAER 501

Query: 577 TEGNGIPETSSERIHKEDPPASYSDLLQSEIVIISNGNGSSYSQTKSRTLPKGVEVSSGR 636
           TEGN IPETSSERIHKEDPPASYSDLLQSEIVIISNGNGS+YSQT+SRTLPKGVE+ SGR
Sbjct: 502 TEGNEIPETSSERIHKEDPPASYSDLLQSEIVIISNGNGSTYSQTRSRTLPKGVELPSGR 561

Query: 637 PRSTSTSMLLRQARPSRPLILCRIQSQTQFWIWRQHAATTCRMMFIH 684
           PRSTSTSMLL QARPSRPLILCRIQ+QTQFWIWRQ+A TTCRMMFIH
Sbjct: 562 PRSTSTSMLLCQARPSRPLILCRIQNQTQFWIWRQNATTTCRMMFIH 608

[Close]

BLAST of HG10007938 vs. NCBI nr
Match: KAG6587964.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 555/685 (81.02%), Postives = 601/685 (87.74%), Query Frame = 0


Query: 1   MDFTTQTLATRKQYWLVYMERLLLLLGLHASSIHANAPPLAAPPPSANAHLKRFHIGGAL 60
           MDFTTQTLATRKQ+ LVYMERLLL+L  HA+SIHANAPP +A PPSA AHLKRFHIG A 
Sbjct: 1   MDFTTQTLATRKQHCLVYMERLLLVLAFHATSIHANAPPSSA-PPSAAAHLKRFHIGRAS 60

Query: 61  SPFIFTYPEAVKDDAVICWGLVNISFLLRHGDGGA--KESCLQKNQVKLVSTPVDSQIQS 120
           SP IFTY EAVKD+ VICW LV  +   ++    +   ES L KNQVKLVSTPVDSQIQS
Sbjct: 61  SPVIFTYSEAVKDNVVICWDLVEGTIASKNLSQASPRMESYLHKNQVKLVSTPVDSQIQS 120

Query: 121 RCLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALT 180
            CLLCLGN SCR VRSRTKLMNIL+E+GKPQEAQFIFDSLVEQGHRPT VTYTALVAALT
Sbjct: 121 HCLLCLGNKSCRIVRSRTKLMNILVEKGKPQEAQFIFDSLVEQGHRPTAVTYTALVAALT 180

Query: 181 RQKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTS 240
           RQK FKAIS LLSE+E+ GIKPDSILFNAIINAFSESGN+EEAM+TFQKM+ES CKPTTS
Sbjct: 181 RQKHFKAISRLLSEIEKNGIKPDSILFNAIINAFSESGNLEEAMETFQKMKESGCKPTTS 240

Query: 241 TFNTLIKGYGIIRKPEESMKLLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQ 300
           TFNTLIKGYG+ RKPEESMKLLELMMRTTNLKPN RTYNILVGA+CKK N+KEAWNVV +
Sbjct: 241 TFNTLIKGYGLARKPEESMKLLELMMRTTNLKPNNRTYNILVGAWCKKNNIKEAWNVVQK 300

Query: 301 MIASGVQPDVVTYNTLARAYAQDGETSKAESIIVEMQNNKVNPNERTCGIIVGGYCEQGN 360
           MIASGVQPDVVTYNTLA+AYAQDG+TS+AESII EM +NKVNPNERTCGIIV GYCEQGN
Sbjct: 301 MIASGVQPDVVTYNTLAKAYAQDGKTSEAESIIEEMHHNKVNPNERTCGIIVSGYCEQGN 360

Query: 361 LAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFST 420
           L EALRVVYRM+DL I PNLVIFNSLIKGFLD+ DSDGVDEALTMME+ G+KPDVITFST
Sbjct: 361 LVEALRVVYRMKDLSIRPNLVIFNSLIKGFLDIEDSDGVDEALTMMEDFGIKPDVITFST 420

Query: 421 IMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYG 480
           IMNGWSSA RMDKCQEIF+DMVKSGIEPDIH FSILAKGFVRAGEP KAESLLNSMSKYG
Sbjct: 421 IMNGWSSAARMDKCQEIFDDMVKSGIEPDIHAFSILAKGFVRAGEPAKAESLLNSMSKYG 480

Query: 481 VRPNVVIYTTIISGWCSAGKMEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPWRAE 540
           VRPNVVI+TTIISGWC+AGKMEKAWR FERMC M+VSPNLKTFETLIWGYGEAKQPWRAE
Sbjct: 481 VRPNVVIFTTIISGWCTAGKMEKAWRAFERMCNMNVSPNLKTFETLIWGYGEAKQPWRAE 540

Query: 541 EILQMMEEKNVVPEDSTLKLVSEAWRSIGMANEAMAERTEGNGIPETSSERIHKEDPPAS 600
           +IL +MEEK VVP+DSTLKLVSEAWRSIGM  EA+AER EGN  PE SS+          
Sbjct: 541 DILHIMEEKGVVPQDSTLKLVSEAWRSIGMDKEAIAERMEGNDTPEKSSD---------- 600

Query: 601 YSDLLQSEIVIISNGNGSSYSQTKSRTLPKGVEVSSGRPRSTSTSMLLRQARPSRPLILC 660
             DLLQ  +VIISNGNGSSYSQT+SRTLPKG+EV SG PRSTSTSML+ +AR  RPL++C
Sbjct: 601 --DLLQPGVVIISNGNGSSYSQTRSRTLPKGIEVPSGSPRSTSTSMLVCRARRFRPLVVC 660

Query: 661 RIQSQTQFWIWRQHAATTCRMMFIH 684
           R Q+ TQFWIWR H  T CRMM+IH
Sbjct: 661 RNQNHTQFWIWRHHTTTPCRMMYIH 672

[Close]

BLAST of HG10007938 vs. NCBI nr
Match: KAG7021854.1 (Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1090.1 bits (2818), Expect = 0.0e+00
Identity = 554/683 (81.11%), Postives = 596/683 (87.26%), Query Frame = 0


Query: 1   MDFTTQTLATRKQYWLVYMERLLLLLGLHASSIHANAPPLAAPPPSANAHLKRFHIGGAL 60
           MDFTTQTLATRKQ+ LVYMERLLL+L  HA+SIHANAPP +A PPSA AHLKRFHIG A 
Sbjct: 1   MDFTTQTLATRKQHCLVYMERLLLVLAFHATSIHANAPPSSA-PPSAAAHLKRFHIGRAS 60

Query: 61  SPFIFTYPEAVKDDAVICWGLVNISFLLRHGDGGAKESCLQKNQVKLVSTPVDSQIQSRC 120
           SP IFTY EAVKD+ VICW L               ES L KNQVKLVSTPVDSQIQS C
Sbjct: 61  SPVIFTYSEAVKDNVVICWDL---------------ESYLHKNQVKLVSTPVDSQIQSHC 120

Query: 121 LLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTRQ 180
           LLCLGN SCR VRSRTKLMNIL+E+GKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTRQ
Sbjct: 121 LLCLGNKSCRIVRSRTKLMNILVEKGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTRQ 180

Query: 181 KRFKAISGLLSEMEETGIKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTSTF 240
           K FKAIS LLSE+E+ GIKPDSILFNAIINAFSESGN+EEAM+TFQKM+ES CKPTTSTF
Sbjct: 181 KHFKAISRLLSEIEKNGIKPDSILFNAIINAFSESGNLEEAMETFQKMKESGCKPTTSTF 240

Query: 241 NTLIKGYGIIRKPEESMKLLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQMI 300
           NTLIKGYG+  KPEESMKLLELMMRTTNLKPN RTYNILVGA+CKK N+KEAWNVV +MI
Sbjct: 241 NTLIKGYGLAHKPEESMKLLELMMRTTNLKPNNRTYNILVGAWCKKNNIKEAWNVVQKMI 300

Query: 301 ASGVQPDVVTYNTLARAYAQDGETSKAESIIVEMQNNKVNPNERTCGIIVGGYCEQGNLA 360
           ASGVQPDVVTYNTLA+AYAQDG+TS+AESII EM +NKVNPNERTCGIIV GYCEQGNL 
Sbjct: 301 ASGVQPDVVTYNTLAKAYAQDGKTSEAESIIEEMHHNKVNPNERTCGIIVSGYCEQGNLV 360

Query: 361 EALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFSTIM 420
           EALRVVYRM+DL I PNLVIFNSLIKGFLD+ DSDGVDEALTMME+ G+KPDVITFSTIM
Sbjct: 361 EALRVVYRMKDLSIRPNLVIFNSLIKGFLDIEDSDGVDEALTMMEDFGIKPDVITFSTIM 420

Query: 421 NGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYGVR 480
           NGWSSA RMDKCQEIF+DMVKSGIEPDIH FSILAKGFVRAGEP KAESLLNSMSKYGVR
Sbjct: 421 NGWSSAARMDKCQEIFDDMVKSGIEPDIHAFSILAKGFVRAGEPAKAESLLNSMSKYGVR 480

Query: 481 PNVVIYTTIISGWCSAGKMEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPWRAEEI 540
           PNVVI+TTIISGWC+AGKMEKAWR FERMC M+VSPNLKTFETLIWGYGEAKQPWRAE+I
Sbjct: 481 PNVVIFTTIISGWCTAGKMEKAWRAFERMCNMNVSPNLKTFETLIWGYGEAKQPWRAEDI 540

Query: 541 LQMMEEKNVVPEDSTLKLVSEAWRSIGMANEAMAERTEGNGIPETSSERIHKEDPPASYS 600
           L +MEEK VVP+DSTLKLVSEAWRSIGM  EA+AER EGN  PE SS+            
Sbjct: 541 LHIMEEKGVVPQDSTLKLVSEAWRSIGMDKEAIAERMEGNDTPEKSSD------------ 600

Query: 601 DLLQSEIVIISNGNGSSYSQTKSRTLPKGVEVSSGRPRSTSTSMLLRQARPSRPLILCRI 660
           DLLQ  +VIISNGNGSSYSQT+SRTLPKG+EV SG PRSTSTSML+ +AR  RPL++CR 
Sbjct: 601 DLLQPGVVIISNGNGSSYSQTRSRTLPKGIEVPSGSPRSTSTSMLVCRARRFRPLVVCRN 655

Query: 661 QSQTQFWIWRQHAATTCRMMFIH 684
           Q+ TQFWIWR H  T CRMM+IH
Sbjct: 661 QNHTQFWIWRHHTTTPCRMMYIH 655

[Close]

BLAST of HG10007938 vs. NCBI nr
Match: XP_008463396.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g21222-like [Cucumis melo])

HSP 1 Score: 1081.2 bits (2795), Expect = 0.0e+00
Identity = 542/588 (92.18%), Postives = 565/588 (96.09%), Query Frame = 0


Query: 97  ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFD 156
           ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKLMNIL+ERGKPQEA+FIF+
Sbjct: 22  ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKLMNILVERGKPQEAEFIFN 81

Query: 157 SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESG 216
           SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG KPDSI  NAIINAFSESG
Sbjct: 82  SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGTKPDSIFLNAIINAFSESG 141

Query: 217 NVEEAMKTFQKMEESRCKPTTSTFNTLIKGYGIIRKPEESMKLLELMMRTTNLKPNTRTY 276
           NV+EAM+ FQKMEES CKPTTSTFNTLIKGYGIIRKPEESMKLLELM RTTNLKPN RTY
Sbjct: 142 NVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTY 201

Query: 277 NILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTLARAYAQDGETSKAESIIVEMQN 336
           NILVGA CKKKN+KEAWNVVHQM+ASGVQPDVVTYNTLARAYAQDGET+KAESIIVEM N
Sbjct: 202 NILVGALCKKKNIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVEMLN 261

Query: 337 NKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDG 396
            KVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLD+GDSDG
Sbjct: 262 KKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDG 321

Query: 397 VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAK 456
           VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIF+DM+KSGIEPDIHVFSILAK
Sbjct: 322 VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAK 381

Query: 457 GFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCSAGKMEKAWRVFERMCAMDVSP 516
           GFVRAGEPVKAESLLNSMSKY V+PNVVI+TTIISGWC+AGKMEKAWRVFERMC MDVSP
Sbjct: 382 GFVRAGEPVKAESLLNSMSKYRVKPNVVIFTTIISGWCTAGKMEKAWRVFERMCDMDVSP 441

Query: 517 NLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMANEAMAER 576
           NLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGM N+AMA+R
Sbjct: 442 NLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMVNDAMAQR 501

Query: 577 TEGNGIPETSSERIHKED-PPASYSDLLQSEIVIISNGNGSSYSQTKSRTLPKGVEVSSG 636
           TE N IP  +SERIHKE+ PPASYS+LL+SEIVI+SNGNGSSYSQT+SRTLPKGVEV SG
Sbjct: 502 TEDNEIPWRNSERIHKEEGPPASYSNLLKSEIVIVSNGNGSSYSQTRSRTLPKGVEVPSG 561

Query: 637 RPRSTSTSMLLRQARPSRPLILCRIQSQTQFWIWRQHAATTCRMMFIH 684
           RPRSTSTSMLLRQ RPSRPLIL  IQ+QTQFWIWRQHA TTCRMMFIH
Sbjct: 562 RPRSTSTSMLLRQTRPSRPLILFHIQNQTQFWIWRQHATTTCRMMFIH 609

[Close]

BLAST of HG10007938 vs. ExPASy Swiss-Prot
Match: Q8S9D1 (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX=3702 GN=ATC401 PE=2 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 1.9e-172
Identity = 285/453 (62.91%), Postives = 372/453 (82.12%), Query Frame = 0


Query: 120 CLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTR 179
           C++C G  +C  VRSRTKLMN LIERG+PQEA  IF++L+E+GH+P+ +TYT LV ALTR
Sbjct: 307 CVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTR 366

Query: 180 QKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTST 239
           QK F ++  L+S++E+ G+KPD+ILFNAIINA SESGN+++AMK F+KM+ES CKPT ST
Sbjct: 367 QKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTAST 426

Query: 240 FNTLIKGYGIIRKPEESMKLLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQM 299
           FNTLIKGYG I K EES +LL++M+R   L+PN RT NILV A+C ++ ++EAWN+V++M
Sbjct: 427 FNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486

Query: 300 IASGVQPDVVTYNTLARAYAQDGETSKAESIIV-EMQNNKVNPNERTCGIIVGGYCEQGN 359
            + GV+PDVVT+NTLA+AYA+ G T  AE +I+  M +NKV PN RTCG IV GYCE+G 
Sbjct: 487 QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGK 546

Query: 360 LAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFST 419
           + EALR  YRM++LG+HPNL +FNSLIKGFL++ D DGV E + +MEE GVKPDV+TFST
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFST 606

Query: 420 IMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYG 479
           +MN WSS G M +C+EI+ DM++ GI+PDIH FSILAKG+ RAGEP KAE +LN M K+G
Sbjct: 607 LMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 666

Query: 480 VRPNVVIYTTIISGWCSAGKMEKAWRVFERMCA-MDVSPNLKTFETLIWGYGEAKQPWRA 539
           VRPNVVIYT IISGWCSAG+M+KA +V+++MC  + +SPNL T+ETLIWG+GEAKQPW+A
Sbjct: 667 VRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKA 726

Query: 540 EEILQMMEEKNVVPEDSTLKLVSEAWRSIGMAN 571
           EE+L+ ME KNVVP   T++L+++ W+SIG++N
Sbjct: 727 EELLKDMEGKNVVPTRKTMQLIADGWKSIGVSN 759

[Close]

BLAST of HG10007938 vs. ExPASy Swiss-Prot
Match: Q8GZ63 (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX=3702 GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 550.8 bits (1418), Expect = 2.1e-155
Identity = 272/491 (55.40%), Postives = 362/491 (73.73%), Query Frame = 0


Query: 120 CLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTR 179
           C  C+  +SCRTVRSRTKLMN+LIERG+P EAQ +F +L E GHRP+ ++YT L+AA+T 
Sbjct: 33  CKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTV 92

Query: 180 QKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTST 239
           QK++ +IS ++SE+E++G K DSI FNA+INAFSESGN+E+A++   KM+E    PTTST
Sbjct: 93  QKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152

Query: 240 FNTLIKGYGIIRKPEESMKLLELMMRTTNLK--PNTRTYNILVGAYCKKKNLKEAWNVVH 299
           +NTLIKGYGI  KPE S +LL+LM+   N+   PN RT+N+LV A+CKKK ++EAW VV 
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212

Query: 300 QMIASGVQPDVVTYNTLARAYAQDGETSKAESIIVE--MQNNKVNPNERTCGIIVGGYCE 359
           +M   GV+PD VTYNT+A  Y Q GET +AES +VE  +   K  PN RTCGI+VGGYC 
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272

Query: 360 QGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVIT 419
           +G + + LR V RM+++ +  NLV+FNSLI GF++V D DG+DE LT+M+E  VK DVIT
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVIT 332

Query: 420 FSTIMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMS 479
           +ST+MN WSSAG M+K  ++F++MVK+G++PD H +SILAKG+VRA EP KAE LL ++ 
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 392

Query: 480 KYGVRPNVVIYTTIISGWCSAGKMEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPW 539
               RPNVVI+TT+ISGWCS G M+ A RVF +MC   VSPN+KTFETL+WGY E KQPW
Sbjct: 393 VES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPW 452

Query: 540 RAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMANEA--MAERTEGNGIPETSSERIHKE 599
           +AEE+LQMM    V PE+ST  L++EAWR  G+ +E+       +   I     E+++++
Sbjct: 453 KAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIEIAKLEKLYQK 512

Query: 600 DPPASYSDLLQ 605
               S  +LLQ
Sbjct: 513 QSSGSSFNLLQ 522

[Close]

BLAST of HG10007938 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 220.7 bits (561), Expect = 5.1e-56
Identity = 130/425 (30.59%), Postives = 219/425 (51.53%), Query Frame = 0


Query: 138 LMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 197
           L++ L    K  EA  + D +V +G +P   TY  +V  L ++        LL +ME+  
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250

Query: 198 IKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTSTFNTLIK---GYGIIRKPE 257
           I+ D +++  II+A     NV +A+  F +M+    +P   T+N+LI+    YG  R  +
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG--RWSD 310

Query: 258 ESMKLLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTL 317
            S  L +++ R  N  PN  T++ L+ A+ K+  L EA  +  +MI   + PD+ TY++L
Sbjct: 311 ASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 370

Query: 318 ARAYAQDGETSKAESIIVEMQNNKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGI 377
              +       +A+ +   M +    PN  T   ++ G+C+   + E + +   M   G+
Sbjct: 371 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 430

Query: 378 HPNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQE 437
             N V +N+LI+G    GD D   +    M   GV PD+IT+S +++G    G+++K   
Sbjct: 431 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 490

Query: 438 IFEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWC 497
           +FE + KS +EPDI+ ++I+ +G  +AG+      L  S+S  GV+PNV+IYTT+ISG+C
Sbjct: 491 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 550

Query: 498 SAGKMEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDS 557
             G  E+A  +F  M      PN  T+ TLI           + E+++ M     V + S
Sbjct: 551 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 610

Query: 558 TLKLV 560
           T+ +V
Sbjct: 611 TISMV 611

[Close]

BLAST of HG10007938 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.6e-56
Identity = 121/435 (27.82%), Postives = 232/435 (53.33%), Query Frame = 0


Query: 125 GNNSCRTVRSRTKLMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTRQKRFK 184
           G  S   V S T ++N   + G   +A   +  ++++G  P  VTY +++AAL + +   
Sbjct: 189 GGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMD 248

Query: 185 AISGLLSEMEETGIKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTSTFNTLI 244
               +L+ M + G+ PD + +N+I++ +  SG  +EA+   +KM     +P   T++ L+
Sbjct: 249 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLM 308

Query: 245 KGYGIIRKPEESMKLLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQMIASGV 304
                  +  E+ K+ + M +   LKP   TY  L+  Y  K  L E   ++  M+ +G+
Sbjct: 309 DYLCKNGRCMEARKIFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 368

Query: 305 QPDVVTYNTLARAYAQDGETSKAESIIVEMQNNKVNPNERTCGIIVGGYCEQGNLAEALR 364
            PD   ++ L  AYA+ G+  +A  +  +M+   +NPN  T G ++G  C+ G + +A+ 
Sbjct: 369 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 428

Query: 365 VVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFSTIMNGWS 424
              +M D G+ P  +++NSLI G       +  +E +  M + G+  + I F++I++   
Sbjct: 429 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 488

Query: 425 SAGRMDKCQEIFEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYGVRPNVV 484
             GR+ + +++FE MV+ G++P++  ++ L  G+  AG+  +A  LL+ M   G++PN V
Sbjct: 489 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 548

Query: 485 IYTTIISGWCSAGKMEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMM 544
            Y+T+I+G+C   +ME A  +F+ M +  VSP++ T+  ++ G  + ++   A+E+   +
Sbjct: 549 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 608

Query: 545 EEKNVVPEDSTLKLV 560
            E     E ST  ++
Sbjct: 609 TESGTQIELSTYNII 622

[Close]

BLAST of HG10007938 vs. ExPASy Swiss-Prot
Match: Q9C8T7 (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX=3702 GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 217.2 bits (552), Expect = 5.6e-55
Identity = 118/427 (27.63%), Postives = 214/427 (50.12%), Query Frame = 0


Query: 136 TKLMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEE 195
           + L+N      +  +A  + D +VE G+RP T+T+T L+  L    +      L+  M +
Sbjct: 84  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143

Query: 196 TGIKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTSTFNTLIKGYGIIRKPEE 255
            G +P+ + +  ++N   + G+++ A     KME ++ +     FNT+I      R  ++
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203

Query: 256 SMKLLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTLA 315
           ++ L +  M T  ++PN  TY+ L+   C      +A  ++  MI   + P++VT+N L 
Sbjct: 204 ALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 263

Query: 316 RAYAQDGETSKAESIIVEMQNNKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIH 375
            A+ ++G+  +AE +  +M    ++P+  T   ++ G+C    L +A ++   M      
Sbjct: 264 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 323

Query: 376 PNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEI 435
           P+L  +N+LIKGF      +   E    M   G+  D +T++T++ G    G  D  Q++
Sbjct: 324 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 383

Query: 436 FEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCS 495
           F+ MV  G+ PDI  +SIL  G    G+  KA  + + M K  ++ ++ IYTT+I G C 
Sbjct: 384 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 443

Query: 496 AGKMEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDST 555
           AGK++  W +F  +    V PN+ T+ T+I G    +    A  +L+ M+E   +P+  T
Sbjct: 444 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 503

Query: 556 LKLVSEA 563
              +  A
Sbjct: 504 YNTLIRA 509

[Close]

BLAST of HG10007938 vs. ExPASy TrEMBL
Match: A0A5A7TZ04 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00210 PE=3 SV=1)

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 585/666 (87.84%), Postives = 611/666 (91.74%), Query Frame = 0


Query: 19  MERLLLLLGLHASSIHANAPPLAAPPPSANAHLKRFHIGGALSPFIFTYPEAVKDDAVIC 78
           ME+LLLLL       HANAPP  A PP A A LKR HIGGALSPFIFTY  AVK  A+I 
Sbjct: 1   MEKLLLLL-----VFHANAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIIN 60

Query: 79  WGLVNISFLLRHGDGGAKESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKL 138
           W      FL+        ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKL
Sbjct: 61  W-----DFLM--------ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKL 120

Query: 139 MNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGI 198
           MNIL+ERGKPQEA+FIF+SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 
Sbjct: 121 MNILVERGKPQEAEFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGT 180

Query: 199 KPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTSTFNTLIKGYGIIRKPEESMK 258
           KPDSI  NAIINAFSESGNV+EAM+ FQKMEES CKPTTSTFNTLIKGYGIIRKPEESMK
Sbjct: 181 KPDSIFLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMK 240

Query: 259 LLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTLARAY 318
           LLELM RTTNLKPN RTYNILVGA CKKKN+KEAWNVVHQM+ASGVQPDVVTYNTLARAY
Sbjct: 241 LLELMTRTTNLKPNNRTYNILVGALCKKKNIKEAWNVVHQMLASGVQPDVVTYNTLARAY 300

Query: 319 AQDGETSKAESIIVEMQNNKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNL 378
           AQDGET+KAESIIVEM N KVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNL
Sbjct: 301 AQDGETNKAESIIVEMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNL 360

Query: 379 VIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFED 438
           VIFNSLIKGFLD+GDSDGVDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIF+D
Sbjct: 361 VIFNSLIKGFLDIGDSDGVDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDD 420

Query: 439 MVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCSAGK 498
           M+KSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKY V+PNVVI+TTIISGWC+AGK
Sbjct: 421 MLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYRVKPNVVIFTTIISGWCTAGK 480

Query: 499 MEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKL 558
           MEKAWRVFERMC MDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKL
Sbjct: 481 MEKAWRVFERMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKL 540

Query: 559 VSEAWRSIGMANEAMAERTEGNGIPETSSERIHKED-PPASYSDLLQSEIVIISNGNGSS 618
           VSEAWRSIGM N+AMA+RTE N IP  +SERIHKE+ PPASYS+LL+SEIVI+SNGNGSS
Sbjct: 541 VSEAWRSIGMVNDAMAQRTEDNEIPWRNSERIHKEEGPPASYSNLLKSEIVIVSNGNGSS 600

Query: 619 YSQTKSRTLPKGVEVSSGRPRSTSTSMLLRQARPSRPLILCRIQSQTQFWIWRQHAATTC 678
           YSQT+SRTLPKGVEV SGRPRSTSTSMLLRQ RPSRPLILC IQ+QTQFWIWRQHA TTC
Sbjct: 601 YSQTRSRTLPKGVEVPSGRPRSTSTSMLLRQTRPSRPLILCHIQNQTQFWIWRQHATTTC 648

Query: 679 RMMFIH 684
           RMMFIH
Sbjct: 661 RMMFIH 648

[Close]

BLAST of HG10007938 vs. ExPASy TrEMBL
Match: A0A1S3CKQ8 (pentatricopeptide repeat-containing protein At5g21222-like OS=Cucumis melo OX=3656 GN=LOC103501564 PE=3 SV=1)

HSP 1 Score: 1081.2 bits (2795), Expect = 0.0e+00
Identity = 542/588 (92.18%), Postives = 565/588 (96.09%), Query Frame = 0


Query: 97  ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFD 156
           ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKLMNIL+ERGKPQEA+FIF+
Sbjct: 22  ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKLMNILVERGKPQEAEFIFN 81

Query: 157 SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESG 216
           SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG KPDSI  NAIINAFSESG
Sbjct: 82  SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGTKPDSIFLNAIINAFSESG 141

Query: 217 NVEEAMKTFQKMEESRCKPTTSTFNTLIKGYGIIRKPEESMKLLELMMRTTNLKPNTRTY 276
           NV+EAM+ FQKMEES CKPTTSTFNTLIKGYGIIRKPEESMKLLELM RTTNLKPN RTY
Sbjct: 142 NVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTY 201

Query: 277 NILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTLARAYAQDGETSKAESIIVEMQN 336
           NILVGA CKKKN+KEAWNVVHQM+ASGVQPDVVTYNTLARAYAQDGET+KAESIIVEM N
Sbjct: 202 NILVGALCKKKNIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVEMLN 261

Query: 337 NKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDG 396
            KVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLD+GDSDG
Sbjct: 262 KKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDG 321

Query: 397 VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAK 456
           VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIF+DM+KSGIEPDIHVFSILAK
Sbjct: 322 VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAK 381

Query: 457 GFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCSAGKMEKAWRVFERMCAMDVSP 516
           GFVRAGEPVKAESLLNSMSKY V+PNVVI+TTIISGWC+AGKMEKAWRVFERMC MDVSP
Sbjct: 382 GFVRAGEPVKAESLLNSMSKYRVKPNVVIFTTIISGWCTAGKMEKAWRVFERMCDMDVSP 441

Query: 517 NLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMANEAMAER 576
           NLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGM N+AMA+R
Sbjct: 442 NLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMVNDAMAQR 501

Query: 577 TEGNGIPETSSERIHKED-PPASYSDLLQSEIVIISNGNGSSYSQTKSRTLPKGVEVSSG 636
           TE N IP  +SERIHKE+ PPASYS+LL+SEIVI+SNGNGSSYSQT+SRTLPKGVEV SG
Sbjct: 502 TEDNEIPWRNSERIHKEEGPPASYSNLLKSEIVIVSNGNGSSYSQTRSRTLPKGVEVPSG 561

Query: 637 RPRSTSTSMLLRQARPSRPLILCRIQSQTQFWIWRQHAATTCRMMFIH 684
           RPRSTSTSMLLRQ RPSRPLIL  IQ+QTQFWIWRQHA TTCRMMFIH
Sbjct: 562 RPRSTSTSMLLRQTRPSRPLILFHIQNQTQFWIWRQHATTTCRMMFIH 609

[Close]

BLAST of HG10007938 vs. ExPASy TrEMBL
Match: A0A6J1CVE6 (pentatricopeptide repeat-containing protein At5g21222-like OS=Momordica charantia OX=3673 GN=LOC111014569 PE=4 SV=1)

HSP 1 Score: 1042.0 bits (2693), Expect = 1.1e-300
Identity = 522/588 (88.78%), Postives = 554/588 (94.22%), Query Frame = 0


Query: 97  ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFD 156
           ESCL+KN+VKLVS PVD QIQSRC LCLGNNSCRTVRSRTKLMNIL+ERGKPQEAQFIFD
Sbjct: 22  ESCLRKNEVKLVSNPVDLQIQSRCFLCLGNNSCRTVRSRTKLMNILVERGKPQEAQFIFD 81

Query: 157 SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESG 216
           SLVEQGH+PTTVTYTALVAALTRQKRFKAISGLLS++EETGIKPDSILFNAIINAFSESG
Sbjct: 82  SLVEQGHKPTTVTYTALVAALTRQKRFKAISGLLSKVEETGIKPDSILFNAIINAFSESG 141

Query: 217 NVEEAMKTFQKMEESRCKPTTSTFNTLIKGYGIIRKPEESMKLLELMMRTTNLKPNTRTY 276
           NVEEAM+TFQKMEESRCKPTTSTFNTLIKGYGI+RKPEESMKLLELM RTTNLKPN RTY
Sbjct: 142 NVEEAMETFQKMEESRCKPTTSTFNTLIKGYGIVRKPEESMKLLELMTRTTNLKPNNRTY 201

Query: 277 NILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTLARAYAQDGETSKAESIIVEMQN 336
           NIL+GA+CKKKN+KEAWNVV +MI++G+QPD VTYNTLARAYAQ+GETSKAE++IVEMQN
Sbjct: 202 NILLGAWCKKKNIKEAWNVVLKMISAGMQPDAVTYNTLARAYAQNGETSKAENLIVEMQN 261

Query: 337 NKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDG 396
            KV PNERTCGIIV GYCEQGNLA+ALRVV RMRDLG+ PNLVIFNSLIKGFLD+GDSDG
Sbjct: 262 KKVRPNERTCGIIVTGYCEQGNLADALRVVNRMRDLGVRPNLVIFNSLIKGFLDIGDSDG 321

Query: 397 VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAK 456
           VDEALTMME+ GVKPDVITFSTIMNGWSSAGRMDKCQEIF DMVKSGIEPDIH FSILAK
Sbjct: 322 VDEALTMMEDFGVKPDVITFSTIMNGWSSAGRMDKCQEIFNDMVKSGIEPDIHAFSILAK 381

Query: 457 GFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCSAGKMEKAWRVFERMCAMDVSP 516
           GFVRAGEPVKAESLL +MSKYGVRPNVVI+TTIISGWC+AGKMEKAWRVFE M  M VSP
Sbjct: 382 GFVRAGEPVKAESLLIAMSKYGVRPNVVIFTTIISGWCTAGKMEKAWRVFEHMRDMVVSP 441

Query: 517 NLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMANEAMAER 576
           NLKTFETLIWGYGEAKQPW+AEEIL MMEEK +VPEDSTLKLVSEAWRSIGM NEA+AER
Sbjct: 442 NLKTFETLIWGYGEAKQPWKAEEILHMMEEKKIVPEDSTLKLVSEAWRSIGMVNEAVAER 501

Query: 577 TEGNGIPETSSERIH-KEDPPASYSDLLQSEIVIISNGNGSSYSQTKSRTLPKGVEVSSG 636
            EG+ IPE SSERIH KEDPPASYSDLLQS +VIISNGNGSSYSQT+SRTLPKGVEV SG
Sbjct: 502 KEGSEIPEKSSERIHKKEDPPASYSDLLQSGVVIISNGNGSSYSQTRSRTLPKGVEVPSG 561

Query: 637 RPRSTSTSMLLRQARPSRPLILCRIQSQTQFWIWRQHAATTCRMMFIH 684
            PRSTSTSMLL QARP RPLI+CRIQSQTQFWIWRQHA TTCRM FIH
Sbjct: 562 CPRSTSTSMLLCQARPFRPLIVCRIQSQTQFWIWRQHATTTCRMRFIH 609

[Close]

BLAST of HG10007938 vs. ExPASy TrEMBL
Match: A0A6J1F5S0 (pentatricopeptide repeat-containing protein At5g21222-like OS=Cucurbita moschata OX=3662 GN=LOC111441080 PE=4 SV=1)

HSP 1 Score: 976.1 bits (2522), Expect = 7.6e-281
Identity = 489/587 (83.30%), Postives = 526/587 (89.61%), Query Frame = 0


Query: 97  ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFD 156
           ES L KNQVKLVSTPVDSQIQS CLLCLGN SCR VRSRTKLMNIL+E+GKPQEAQFIFD
Sbjct: 22  ESYLHKNQVKLVSTPVDSQIQSHCLLCLGNKSCRIVRSRTKLMNILVEKGKPQEAQFIFD 81

Query: 157 SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESG 216
           SLVEQGHRPTTVTYTALVAALTRQK FKAIS LLSE+E+ GIKPDSILFNAIINAFSESG
Sbjct: 82  SLVEQGHRPTTVTYTALVAALTRQKHFKAISRLLSEIEKNGIKPDSILFNAIINAFSESG 141

Query: 217 NVEEAMKTFQKMEESRCKPTTSTFNTLIKGYGIIRKPEESMKLLELMMRTTNLKPNTRTY 276
           N+EEAM+TFQKM+ES CKPTTSTFNTLIKGYG+  KPEESMKLLELMMRTTNLKPN RTY
Sbjct: 142 NLEEAMETFQKMKESGCKPTTSTFNTLIKGYGLAHKPEESMKLLELMMRTTNLKPNNRTY 201

Query: 277 NILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTLARAYAQDGETSKAESIIVEMQN 336
           NILVGA+CKK N+KEAWNVV +MIASGVQPDVVTYNTLA+AYAQDG+TS+AESII EM +
Sbjct: 202 NILVGAWCKKNNIKEAWNVVQKMIASGVQPDVVTYNTLAKAYAQDGKTSEAESIIEEMHH 261

Query: 337 NKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDG 396
           NKVNPNERTCGIIV GYCEQGNL EALRVVYRM+DL I PNLVIFNSLIKGFLD+ DSDG
Sbjct: 262 NKVNPNERTCGIIVSGYCEQGNLVEALRVVYRMKDLSIRPNLVIFNSLIKGFLDIEDSDG 321

Query: 397 VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAK 456
           VDEALTMME+ G+KPDVITFSTIMNGWSSA RMDKCQEIF+DMVKSGIEPDIH FSILAK
Sbjct: 322 VDEALTMMEDFGIKPDVITFSTIMNGWSSAARMDKCQEIFDDMVKSGIEPDIHAFSILAK 381

Query: 457 GFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCSAGKMEKAWRVFERMCAMDVSP 516
           GFVRAGEP KAESLLNSMSKYGVRPNVVI+TTIISGWC+AGKMEKAWR FERMC M+VSP
Sbjct: 382 GFVRAGEPAKAESLLNSMSKYGVRPNVVIFTTIISGWCTAGKMEKAWRAFERMCNMNVSP 441

Query: 517 NLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMANEAMAER 576
           NLKTFETLIWGYGEAKQPWRAE+IL +MEEK VVP+DSTLKLVSEAWRSIGM  EA++ER
Sbjct: 442 NLKTFETLIWGYGEAKQPWRAEDILHIMEEKGVVPQDSTLKLVSEAWRSIGMDKEAISER 501

Query: 577 TEGNGIPETSSERIHKEDPPASYSDLLQSEIVIISNGNGSSYSQTKSRTLPKGVEVSSGR 636
            EGN  PE SS+            DL Q  +VIISNGNGSSYSQT+SRTLPKG+EV SG 
Sbjct: 502 MEGNDTPEKSSD------------DLFQPGVVIISNGNGSSYSQTRSRTLPKGIEVPSGS 561

Query: 637 PRSTSTSMLLRQARPSRPLILCRIQSQTQFWIWRQHAATTCRMMFIH 684
           PRSTSTSML+ +AR  RPLI+CR Q+ TQFWIWR H  T CRMM+IH
Sbjct: 562 PRSTSTSMLVCRARRFRPLIVCRNQNHTQFWIWRHHTTTPCRMMYIH 596

[Close]

BLAST of HG10007938 vs. ExPASy TrEMBL
Match: A0A6J1IC78 (pentatricopeptide repeat-containing protein At5g21222-like OS=Cucurbita maxima OX=3661 GN=LOC111471658 PE=4 SV=1)

HSP 1 Score: 960.7 bits (2482), Expect = 3.3e-276
Identity = 484/587 (82.45%), Postives = 523/587 (89.10%), Query Frame = 0


Query: 97  ESCLQKNQVKLVSTPVDSQIQSRCLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFD 156
           ES L KNQVKLVSTPV+ QIQS CLLCLGN SCR VRSRTKLMNIL+E+GKPQEAQFIFD
Sbjct: 22  ESYLHKNQVKLVSTPVNLQIQSHCLLCLGNKSCRIVRSRTKLMNILVEKGKPQEAQFIFD 81

Query: 157 SLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESG 216
           SLVEQGHRPTTVTYTALVAALTRQK FKAIS LL EME+  IKPDSILFNAIINAFSESG
Sbjct: 82  SLVEQGHRPTTVTYTALVAALTRQKHFKAISRLLLEMEKNDIKPDSILFNAIINAFSESG 141

Query: 217 NVEEAMKTFQKMEESRCKPTTSTFNTLIKGYGIIRKPEESMKLLELMMRTTNLKPNTRTY 276
           N++EAM+T QKM+ES CKPTTSTFNTLIKGYGI RKPEESMKLL+LMMRTT LKPN RTY
Sbjct: 142 NLKEAMETCQKMKESGCKPTTSTFNTLIKGYGIARKPEESMKLLDLMMRTTKLKPNNRTY 201

Query: 277 NILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTLARAYAQDGETSKAESIIVEMQN 336
           NILVGA+CKK N+KEAWNVV +MIASGVQPDVVTYNTLA+AYAQDG+TS+AESII EM +
Sbjct: 202 NILVGAWCKKNNIKEAWNVVQKMIASGVQPDVVTYNTLAKAYAQDGKTSEAESIIEEMHH 261

Query: 337 NKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDG 396
           NKVNPNERTCGIIV GYCEQGNL EALRVVYRM++L I PNLVIFNSLIKGFLD+ DSDG
Sbjct: 262 NKVNPNERTCGIIVSGYCEQGNLVEALRVVYRMKELRILPNLVIFNSLIKGFLDIEDSDG 321

Query: 397 VDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAK 456
           VDEALTMME+ G+KPDVITFSTIMNGWSSAGRMDKCQEIF+DMVKSGIEPDIH FSILAK
Sbjct: 322 VDEALTMMEDFGIKPDVITFSTIMNGWSSAGRMDKCQEIFDDMVKSGIEPDIHAFSILAK 381

Query: 457 GFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCSAGKMEKAWRVFERMCAMDVSP 516
           GFVRAGEP KAESLLNSMSKYGVRPNVVI+TTIISGWC+ GKMEKAWR FERMC M+VSP
Sbjct: 382 GFVRAGEPAKAESLLNSMSKYGVRPNVVIFTTIISGWCTTGKMEKAWRAFERMCDMNVSP 441

Query: 517 NLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMANEAMAER 576
           NLKTFETLIWGYGEAKQPWRAE+IL +MEEK VVP+DSTLKLVSEAWRSIGM  EA+AER
Sbjct: 442 NLKTFETLIWGYGEAKQPWRAEDILHIMEEKGVVPQDSTLKLVSEAWRSIGMDKEAIAER 501

Query: 577 TEGNGIPETSSERIHKEDPPASYSDLLQSEIVIISNGNGSSYSQTKSRTLPKGVEVSSGR 636
            EGN  PE SS+            DLLQ  +VIISNGNGSSYSQT+SRTLPKG+EV SG 
Sbjct: 502 MEGNDTPEKSSD------------DLLQPGLVIISNGNGSSYSQTRSRTLPKGIEVPSGS 561

Query: 637 PRSTSTSMLLRQARPSRPLILCRIQSQTQFWIWRQHAATTCRMMFIH 684
           PRSTSTSML+ +AR  RPLI+CR Q+ TQ WIWRQH  T CRM++IH
Sbjct: 562 PRSTSTSMLVCRARRFRPLIVCRNQNHTQLWIWRQHTTTPCRMIYIH 596

[Close]

BLAST of HG10007938 vs. TAIR 10
Match: AT5G21222.1 (protein kinase family protein )

HSP 1 Score: 607.4 bits (1565), Expect = 1.4e-173
Identity = 285/453 (62.91%), Postives = 372/453 (82.12%), Query Frame = 0


Query: 120 CLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTR 179
           C++C G  +C  VRSRTKLMN LIERG+PQEA  IF++L+E+GH+P+ +TYT LV ALTR
Sbjct: 307 CVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTR 366

Query: 180 QKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTST 239
           QK F ++  L+S++E+ G+KPD+ILFNAIINA SESGN+++AMK F+KM+ES CKPT ST
Sbjct: 367 QKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTAST 426

Query: 240 FNTLIKGYGIIRKPEESMKLLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQM 299
           FNTLIKGYG I K EES +LL++M+R   L+PN RT NILV A+C ++ ++EAWN+V++M
Sbjct: 427 FNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486

Query: 300 IASGVQPDVVTYNTLARAYAQDGETSKAESIIV-EMQNNKVNPNERTCGIIVGGYCEQGN 359
            + GV+PDVVT+NTLA+AYA+ G T  AE +I+  M +NKV PN RTCG IV GYCE+G 
Sbjct: 487 QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGK 546

Query: 360 LAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFST 419
           + EALR  YRM++LG+HPNL +FNSLIKGFL++ D DGV E + +MEE GVKPDV+TFST
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFST 606

Query: 420 IMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYG 479
           +MN WSS G M +C+EI+ DM++ GI+PDIH FSILAKG+ RAGEP KAE +LN M K+G
Sbjct: 607 LMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 666

Query: 480 VRPNVVIYTTIISGWCSAGKMEKAWRVFERMCA-MDVSPNLKTFETLIWGYGEAKQPWRA 539
           VRPNVVIYT IISGWCSAG+M+KA +V+++MC  + +SPNL T+ETLIWG+GEAKQPW+A
Sbjct: 667 VRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKA 726

Query: 540 EEILQMMEEKNVVPEDSTLKLVSEAWRSIGMAN 571
           EE+L+ ME KNVVP   T++L+++ W+SIG++N
Sbjct: 727 EELLKDMEGKNVVPTRKTMQLIADGWKSIGVSN 759

[Close]

BLAST of HG10007938 vs. TAIR 10
Match: AT5G25630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 550.8 bits (1418), Expect = 1.5e-156
Identity = 272/491 (55.40%), Postives = 362/491 (73.73%), Query Frame = 0


Query: 120 CLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTR 179
           C  C+  +SCRTVRSRTKLMN+LIERG+P EAQ +F +L E GHRP+ ++YT L+AA+T 
Sbjct: 33  CKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTV 92

Query: 180 QKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTST 239
           QK++ +IS ++SE+E++G K DSI FNA+INAFSESGN+E+A++   KM+E    PTTST
Sbjct: 93  QKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152

Query: 240 FNTLIKGYGIIRKPEESMKLLELMMRTTNLK--PNTRTYNILVGAYCKKKNLKEAWNVVH 299
           +NTLIKGYGI  KPE S +LL+LM+   N+   PN RT+N+LV A+CKKK ++EAW VV 
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212

Query: 300 QMIASGVQPDVVTYNTLARAYAQDGETSKAESIIVE--MQNNKVNPNERTCGIIVGGYCE 359
           +M   GV+PD VTYNT+A  Y Q GET +AES +VE  +   K  PN RTCGI+VGGYC 
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272

Query: 360 QGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVIT 419
           +G + + LR V RM+++ +  NLV+FNSLI GF++V D DG+DE LT+M+E  VK DVIT
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVIT 332

Query: 420 FSTIMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMS 479
           +ST+MN WSSAG M+K  ++F++MVK+G++PD H +SILAKG+VRA EP KAE LL ++ 
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 392

Query: 480 KYGVRPNVVIYTTIISGWCSAGKMEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPW 539
               RPNVVI+TT+ISGWCS G M+ A RVF +MC   VSPN+KTFETL+WGY E KQPW
Sbjct: 393 VES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPW 452

Query: 540 RAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMANEA--MAERTEGNGIPETSSERIHKE 599
           +AEE+LQMM    V PE+ST  L++EAWR  G+ +E+       +   I     E+++++
Sbjct: 453 KAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIEIAKLEKLYQK 512

Query: 600 DPPASYSDLLQ 605
               S  +LLQ
Sbjct: 513 QSSGSSFNLLQ 522

[Close]

BLAST of HG10007938 vs. TAIR 10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 537.0 bits (1382), Expect = 2.3e-152
Identity = 290/590 (49.15%), Postives = 388/590 (65.76%), Query Frame = 0


Query: 120 CLLCLGNNSCRTVRSRTKLMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTR 179
           C  C+  +SCRTVRSRTKLMN+LIERG+P EAQ +F +L E GHRP+ ++YT L+AA+T 
Sbjct: 33  CKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTV 92

Query: 180 QKRFKAISGLLSEMEETGIKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTST 239
           QK++ +IS ++SE+E++G K DSI FNA+INAFSESGN+E+A++   KM+E    PTTST
Sbjct: 93  QKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152

Query: 240 FNTLIKGYGIIRKPEESMKLLELMMRTTNLK--PNTRTYNILVGAYCKKKNLKEAWNVVH 299
           +NTLIKGYGI  KPE S +LL+LM+   N+   PN RT+N+LV A+CKKK ++EAW VV 
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212

Query: 300 QMIASGVQPDVVTYNTLARAYAQDGETSKAESIIVE--MQNNKVNPNERTCGIIVGGYCE 359
           +M   GV+PD VTYNT+A  Y Q GET +AES +VE  +   K  PN RTCGI+VGGYC 
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272

Query: 360 QGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDVGDSDGVDE---------------- 419
           +G + + LR V RM+++ +  NLV+FNSLI GF++V D DG+DE                
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVEL 332

Query: 420 ---------ALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFEDMVKSGIEPDIHV 479
                     LT+M+E  VK DVIT+ST+MN WSSAG M+K  ++F++MVK+G++PD H 
Sbjct: 333 VGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 392

Query: 480 FSILAKGFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCSAGKMEKAWRVFERMC 539
           +SILAKG+VRA EP KAE LL ++     RPNVVI+TT+ISGWCS G M+ A RVF +MC
Sbjct: 393 YSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMC 452

Query: 540 AMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDSTLKLVSEAWRSIGMAN 599
              VSPN+KTFETL+WGY E KQPW+AEE+LQMM    V PE+ST  L++EAWR  G+ +
Sbjct: 453 KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTD 512

Query: 600 EA--MAERTEGNGIPETSSERIHKEDPPASYSDLLQSEIVIISNGNGSSYSQTKSRTLPK 659
           E+       +   I     E+++++    S  +LLQ  +                R LP 
Sbjct: 513 ESNKAINALKCKDIEIAKLEKLYQKQSSGSSFNLLQIPV--------------GKRELP- 572

Query: 660 GVEVSSGRPRSTSTSMLLRQAR-PSRPLILCRIQSQTQFWIWRQ--HAAT 676
                      T+ +M L   +  +R  I+C+ QSQ QF I  Q  H+ T
Sbjct: 573 -----------TAKAMNLSACKLGARVPIICQKQSQAQFGISGQFVHSCT 595

[Close]

BLAST of HG10007938 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 220.7 bits (561), Expect = 3.6e-57
Identity = 130/425 (30.59%), Postives = 219/425 (51.53%), Query Frame = 0


Query: 138 LMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 197
           L++ L    K  EA  + D +V +G +P   TY  +V  L ++        LL +ME+  
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250

Query: 198 IKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTSTFNTLIK---GYGIIRKPE 257
           I+ D +++  II+A     NV +A+  F +M+    +P   T+N+LI+    YG  R  +
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG--RWSD 310

Query: 258 ESMKLLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTL 317
            S  L +++ R  N  PN  T++ L+ A+ K+  L EA  +  +MI   + PD+ TY++L
Sbjct: 311 ASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 370

Query: 318 ARAYAQDGETSKAESIIVEMQNNKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGI 377
              +       +A+ +   M +    PN  T   ++ G+C+   + E + +   M   G+
Sbjct: 371 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 430

Query: 378 HPNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQE 437
             N V +N+LI+G    GD D   +    M   GV PD+IT+S +++G    G+++K   
Sbjct: 431 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 490

Query: 438 IFEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWC 497
           +FE + KS +EPDI+ ++I+ +G  +AG+      L  S+S  GV+PNV+IYTT+ISG+C
Sbjct: 491 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 550

Query: 498 SAGKMEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDS 557
             G  E+A  +F  M      PN  T+ TLI           + E+++ M     V + S
Sbjct: 551 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 610

Query: 558 TLKLV 560
           T+ +V
Sbjct: 611 TISMV 611

[Close]

BLAST of HG10007938 vs. TAIR 10
Match: AT1G63330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 217.2 bits (552), Expect = 4.0e-56
Identity = 118/427 (27.63%), Postives = 214/427 (50.12%), Query Frame = 0


Query: 136 TKLMNILIERGKPQEAQFIFDSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEE 195
           + L+N      +  +A  + D +VE G+RP T+T+T L+  L    +      L+  M +
Sbjct: 84  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143

Query: 196 TGIKPDSILFNAIINAFSESGNVEEAMKTFQKMEESRCKPTTSTFNTLIKGYGIIRKPEE 255
            G +P+ + +  ++N   + G+++ A     KME ++ +     FNT+I      R  ++
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203

Query: 256 SMKLLELMMRTTNLKPNTRTYNILVGAYCKKKNLKEAWNVVHQMIASGVQPDVVTYNTLA 315
           ++ L +  M T  ++PN  TY+ L+   C      +A  ++  MI   + P++VT+N L 
Sbjct: 204 ALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 263

Query: 316 RAYAQDGETSKAESIIVEMQNNKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIH 375
            A+ ++G+  +AE +  +M    ++P+  T   ++ G+C    L +A ++   M      
Sbjct: 264 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 323

Query: 376 PNLVIFNSLIKGFLDVGDSDGVDEALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEI 435
           P+L  +N+LIKGF      +   E    M   G+  D +T++T++ G    G  D  Q++
Sbjct: 324 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 383

Query: 436 FEDMVKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNSMSKYGVRPNVVIYTTIISGWCS 495
           F+ MV  G+ PDI  +SIL  G    G+  KA  + + M K  ++ ++ IYTT+I G C 
Sbjct: 384 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 443

Query: 496 AGKMEKAWRVFERMCAMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEKNVVPEDST 555
           AGK++  W +F  +    V PN+ T+ T+I G    +    A  +L+ M+E   +P+  T
Sbjct: 444 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 503

Query: 556 LKLVSEA 563
              +  A
Sbjct: 504 YNTLIRA 509

The following BLAST results are available for this feature:

BLAST of HG10007938 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046551.1	0.0e+00	87.84	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK28707...	[more]
XP_038878813.1	0.0e+00	94.55	pentatricopeptide repeat-containing protein At5g25630-like [Benincasa hispida]	[more]
KAG6587964.1	0.0e+00	81.02	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG7021854.1	0.0e+00	81.11	Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyr...	[more]
XP_008463396.1	0.0e+00	92.18	PREDICTED: pentatricopeptide repeat-containing protein At5g21222-like [Cucumis m...	[more]

BLAST of HG10007938 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9D1	1.9e-172	62.91	Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX...	[more]
Q8GZ63	2.1e-155	55.40	Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX...	[more]
Q9LQ14	5.1e-56	30.59	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
Q76C99	6.6e-56	27.82	Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV...	[more]
Q9C8T7	5.6e-55	27.63	Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX...	[more]

BLAST of HG10007938 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZ04	0.0e+00	87.84	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CKQ8	0.0e+00	92.18	pentatricopeptide repeat-containing protein At5g21222-like OS=Cucumis melo OX=36...	[more]
A0A6J1CVE6	1.1e-300	88.78	pentatricopeptide repeat-containing protein At5g21222-like OS=Momordica charanti...	[more]
A0A6J1F5S0	7.6e-281	83.30	pentatricopeptide repeat-containing protein At5g21222-like OS=Cucurbita moschata...	[more]
A0A6J1IC78	3.3e-276	82.45	pentatricopeptide repeat-containing protein At5g21222-like OS=Cucurbita maxima O...	[more]

BLAST of HG10007938 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21222.1	1.4e-173	62.91	protein kinase family protein	[more]
AT5G25630.1	1.5e-156	55.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G25630.2	2.3e-152	49.15	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62930.1	3.6e-57	30.59	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G63330.1	4.0e-56	27.63	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 271..319 e-value: 2.2E-14 score: 53.3 coord: 481..528 e-value: 7.0E-14 score: 51.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 450..479 e-value: 0.0037 score: 17.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 204..236 e-value: 1.3E-8 score: 32.5 coord: 239..273 e-value: 3.9E-5 score: 21.6 coord: 450..483 e-value: 2.0E-6 score: 25.6 coord: 484..517 e-value: 8.0E-10 score: 36.3 coord: 309..343 e-value: 3.2E-7 score: 28.1 coord: 345..377 e-value: 1.1E-6 score: 26.5 coord: 414..448 e-value: 2.6E-7 score: 28.4 coord: 168..202 e-value: 1.3E-5 score: 23.0 coord: 275..308 e-value: 1.0E-9 score: 35.9 coord: 379..413 e-value: 8.8E-5 score: 20.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 189..248 e-value: 4.0E-15 score: 55.7 coord: 365..421 e-value: 5.1E-10 score: 39.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 166..200 score: 10.47906
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 482..516 score: 12.58363
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 517..551 score: 9.97484
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 447..481 score: 10.687325
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 377..411 score: 10.205028
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 236..271 score: 9.503505
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 307..341 score: 11.553267
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 201..235 score: 12.780933
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 342..376 score: 11.345003
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 272..306 score: 13.120733
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 412..446 score: 12.715165
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 404..623 e-value: 7.6E-50 score: 172.0 coord: 126..264 e-value: 1.8E-31 score: 111.6 coord: 265..403 e-value: 7.5E-41 score: 142.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 577..596
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 614..645
None	No IPR available	PANTHER	PTHR47931	OS01G0228400 PROTEIN	coord: 98..682
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 149..374

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007938.1	HG10007938.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding