HG10007625 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10007625
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAluminum-activated malate transporter 2
LocationChr10: 8753395 .. 8753709 (+)
RNA-Seq ExpressionHG10007625
SyntenyHG10007625
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATAAGAGATATAATAATTTCACCTGCCTTGGCCAAGTCCCACATTAAAATAGCAAAGGAGAAGGCTGAGGAGCTCATGTCTTTTCTAACAACTAGCCATTTTAATGGTGACATGAAGATGGTATCAACTACAACTTTGATTTTACTGCTCATTGATTGTTTATCTTGTGTCGAGAAGATCGCTGATTCCATCCGCGAGTTTGTTTCGCTTGCTCGGCTCAAGACCGTGTTGAAGCAGGCCGGTGTAACGCCGACAGAGCAAAAGCCTCATCATAACATTACCATTACTCAAATTCAAATTGGAGAGTAG

mRNA sequence

ATGGCAATAAGAGATATAATAATTTCACCTGCCTTGGCCAAGTCCCACATTAAAATAGCAAAGGAGAAGGCTGAGGAGCTCATGTCTTTTCTAACAACTAGCCATTTTAATGGTGACATGAAGATGGTATCAACTACAACTTTGATTTTACTGCTCATTGATTGTTTATCTTGTGTCGAGAAGATCGCTGATTCCATCCGCGAGTTTGTTTCGCTTGCTCGGCTCAAGACCGTGTTGAAGCAGGCCGGTGTAACGCCGACAGAGCAAAAGCCTCATCATAACATTACCATTACTCAAATTCAAATTGGAGAGTAG

Coding sequence (CDS)

ATGGCAATAAGAGATATAATAATTTCACCTGCCTTGGCCAAGTCCCACATTAAAATAGCAAAGGAGAAGGCTGAGGAGCTCATGTCTTTTCTAACAACTAGCCATTTTAATGGTGACATGAAGATGGTATCAACTACAACTTTGATTTTACTGCTCATTGATTGTTTATCTTGTGTCGAGAAGATCGCTGATTCCATCCGCGAGTTTGTTTCGCTTGCTCGGCTCAAGACCGTGTTGAAGCAGGCCGGTGTAACGCCGACAGAGCAAAAGCCTCATCATAACATTACCATTACTCAAATTCAAATTGGAGAGTAG

Protein sequence

MAIRDIIISPALAKSHIKIAKEKAEELMSFLTTSHFNGDMKMVSTTTLILLLIDCLSCVEKIADSIREFVSLARLKTVLKQAGVTPTEQKPHHNITITQIQIGE
Homology
[Close]
BLAST of HG10007625 vs. NCBI nr
Match: XP_038880423.1 (aluminum-activated malate transporter 2-like [Benincasa hispida])

HSP 1 Score: 154.5 bits (389), Expect = 5.2e-34
Identity = 84/104 (80.77%), Postives = 90/104 (86.54%), Query Frame = 0 

Query: 1   MAIRDIIISPALAKSHIKIAKEKAEELMSFLTTSHFNGDMKMVSTTTLILLLIDCLSCVE 60
           MAIRD I  PALAKSHI+IAKEKAEEL+S LT+ HFNGDMKMVSTTTLILLLIDCLSCVE
Sbjct: 343 MAIRD-INPPALAKSHIQIAKEKAEELISLLTSIHFNGDMKMVSTTTLILLLIDCLSCVE 402

Query: 61  KIADSIREFVSLARLKTVLKQAGVTPTEQKPHHNITITQIQIGE 105
           KI+DS+ EFV LARLKT  K+AG TPTEQK HHN T TQIQI E
Sbjct: 403 KISDSVHEFVLLARLKTAPKRAGATPTEQKAHHNSTTTQIQISE 445

[Close]
BLAST of HG10007625 vs. NCBI nr
Match: KAA0055916.1 (aluminum-activated malate transporter 2 [Cucumis melo var. makuwa] >TYK28119.1 aluminum-activated malate transporter 2 [Cucumis melo var. makuwa])

HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29
Identity = 80/106 (75.47%), Postives = 86/106 (81.13%), Query Frame = 0 

Query: 1   MAIRDIIISPALAKSHIKIAKEKAEELMSFLTTSHFNGDMKMVSTTTLILLLIDCLSCVE 60
           MAIRD II PA+AKSH++ AKE AEELMS L  SHFNGDMKMVSTT LI LLIDCLSCVE
Sbjct: 207 MAIRD-IIPPAMAKSHMEKAKENAEELMSLLRNSHFNGDMKMVSTTALIYLLIDCLSCVE 266

Query: 61  KIADSIREFVSLARLKT--VLKQAGVTPTEQKPHHNITITQIQIGE 105
           KI DS+ + VSLAR KT  + KQAGV PTEQK  HNITITQIQI E
Sbjct: 267 KIVDSVNDLVSLARPKTPPLPKQAGVMPTEQKTPHNITITQIQIAE 311

[Close]
BLAST of HG10007625 vs. NCBI nr
Match: XP_004139137.1 (aluminum-activated malate transporter 2 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 9.5e-28
Identity = 78/106 (73.58%), Postives = 83/106 (78.30%), Query Frame = 0 

Query: 1   MAIRDIIISPALAKSHIKIAKEKAEELMSFLTTSHFNGDMKMVSTTTLILLLIDCLSCVE 60
           MAIRD II PA+AKSH + AKEKAE LMS L +SHFNGDMKMVSTTTLI LLIDCLSCVE
Sbjct: 342 MAIRD-IIPPAMAKSHTEKAKEKAEALMSLLKSSHFNGDMKMVSTTTLIYLLIDCLSCVE 401

Query: 61  KIADSIREFVSLARLKTV--LKQAGVTPTEQKPHHNITITQIQIGE 105
           KI DS+ + VSLAR KT    KQAGV  TEQK  HNI IT IQI E
Sbjct: 402 KIVDSVHDLVSLARPKTTHPPKQAGVMSTEQKAPHNIIITHIQIAE 446

[Close]
BLAST of HG10007625 vs. NCBI nr
Match: KAE8653542.1 (hypothetical protein Csa_006874 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 9.5e-28
Identity = 78/106 (73.58%), Postives = 83/106 (78.30%), Query Frame = 0 

Query: 1   MAIRDIIISPALAKSHIKIAKEKAEELMSFLTTSHFNGDMKMVSTTTLILLLIDCLSCVE 60
           MAIRD II PA+AKSH + AKEKAE LMS L +SHFNGDMKMVSTTTLI LLIDCLSCVE
Sbjct: 115 MAIRD-IIPPAMAKSHTEKAKEKAEALMSLLKSSHFNGDMKMVSTTTLIYLLIDCLSCVE 174

Query: 61  KIADSIREFVSLARLKTV--LKQAGVTPTEQKPHHNITITQIQIGE 105
           KI DS+ + VSLAR KT    KQAGV  TEQK  HNI IT IQI E
Sbjct: 175 KIVDSVHDLVSLARPKTTHPPKQAGVMSTEQKAPHNIIITHIQIAE 219

[Close]
BLAST of HG10007625 vs. NCBI nr
Match: KAG6588242.1 (Aluminum-activated malate transporter 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122.9 bits (307), Expect = 1.7e-24
Identity = 69/113 (61.06%), Postives = 82/113 (72.57%), Query Frame = 0 

Query: 1   MAIRDIIISPALAKSHIKIAKEKAEELMSFLTTSHFNGDMKMVSTTTLILLLIDCLSCVE 60
           MA+RD I+ PALAKSHI+IAK+ A EL   + +SHF+GDM MVSTTTLILLLID  SCVE
Sbjct: 343 MALRD-IVPPALAKSHIEIAKKTAGELKLLIASSHFHGDMNMVSTTTLILLLIDSFSCVE 402

Query: 61  KIADSIREFVSLARLKTVLKQAGVTPTEQK---------PHHNITITQIQIGE 105
           KI DSI E VSLAR+ T L+++ +TPTEQK         PHH +TI Q Q  E
Sbjct: 403 KIVDSIHELVSLARMNTALQKSNITPTEQKGSGDKASSQPHHIVTIAQSQFAE 454

[Close]
BLAST of HG10007625 vs. ExPASy TrEMBL
Match: A0A5D3DXG5 (Aluminum-activated malate transporter 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00250 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.9e-30
Identity = 80/106 (75.47%), Postives = 86/106 (81.13%), Query Frame = 0 

Query: 1   MAIRDIIISPALAKSHIKIAKEKAEELMSFLTTSHFNGDMKMVSTTTLILLLIDCLSCVE 60
           MAIRD II PA+AKSH++ AKE AEELMS L  SHFNGDMKMVSTT LI LLIDCLSCVE
Sbjct: 207 MAIRD-IIPPAMAKSHMEKAKENAEELMSLLRNSHFNGDMKMVSTTALIYLLIDCLSCVE 266

Query: 61  KIADSIREFVSLARLKT--VLKQAGVTPTEQKPHHNITITQIQIGE 105
           KI DS+ + VSLAR KT  + KQAGV PTEQK  HNITITQIQI E
Sbjct: 267 KIVDSVNDLVSLARPKTPPLPKQAGVMPTEQKTPHNITITQIQIAE 311

[Close]
BLAST of HG10007625 vs. ExPASy TrEMBL
Match: A0A0A0LZX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G630340 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.6e-28
Identity = 78/106 (73.58%), Postives = 83/106 (78.30%), Query Frame = 0 

Query: 1   MAIRDIIISPALAKSHIKIAKEKAEELMSFLTTSHFNGDMKMVSTTTLILLLIDCLSCVE 60
           MAIRD II PA+AKSH + AKEKAE LMS L +SHFNGDMKMVSTTTLI LLIDCLSCVE
Sbjct: 77  MAIRD-IIPPAMAKSHTEKAKEKAEALMSLLKSSHFNGDMKMVSTTTLIYLLIDCLSCVE 136

Query: 61  KIADSIREFVSLARLKTV--LKQAGVTPTEQKPHHNITITQIQIGE 105
           KI DS+ + VSLAR KT    KQAGV  TEQK  HNI IT IQI E
Sbjct: 137 KIVDSVHDLVSLARPKTTHPPKQAGVMSTEQKAPHNIIITHIQIAE 181

[Close]
BLAST of HG10007625 vs. ExPASy TrEMBL
Match: A0A6J1KQZ3 (aluminum-activated malate transporter 2-like OS=Cucurbita maxima OX=3661 GN=LOC111496849 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.1e-24
Identity = 71/112 (63.39%), Postives = 81/112 (72.32%), Query Frame = 0 

Query: 2   AIRDIIISPALAKSHIKIAKEKAEELMSFLTTSHFNGDMKMVSTTTLILLLIDCLSCVEK 61
           A+RD I+ PALAKSHI+IAK+ A EL   L +SHF+GDM MVSTTTLILLLID  SCVEK
Sbjct: 344 ALRD-IVPPALAKSHIEIAKKTAGELKLLLASSHFHGDMNMVSTTTLILLLIDSFSCVEK 403

Query: 62  IADSIREFVSLARLKTVLKQAGVTPTEQK---------PHHNITITQIQIGE 105
           I DSI E VSLARL T L+++ VTPTEQK         PHH +TI Q Q  E
Sbjct: 404 IVDSIHELVSLARLNTALQKSDVTPTEQKGSGDKASSQPHHIVTIAQSQFAE 454

[Close]
BLAST of HG10007625 vs. ExPASy TrEMBL
Match: A0A6J1DGA3 (aluminum-activated malate transporter 2-like OS=Momordica charantia OX=3673 GN=LOC111020785 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-16
Identity = 60/108 (55.56%), Postives = 71/108 (65.74%), Query Frame = 0 

Query: 1   MAIRDIIISPALAKSHIKIAKEKAEELMSFLTTSHFNGDMKMVSTTTLILLLIDCLSCVE 60
           MAIRD I  P  A+SHI+ A +  EEL + LT+SHFNG M+MV  TTLI+LLID  SC +
Sbjct: 291 MAIRD-ITPPTTAESHIEKANKTTEELKTLLTSSHFNGGMEMVLATTLIILLIDSFSCSQ 350

Query: 61  KIADSIREFVSLARLKTVL-KQAGVTPTEQK------PHHNITITQIQ 102
           KIADS+ E VSLARLKTV   Q+ V P E +       HH ITI   Q
Sbjct: 351 KIADSVHELVSLARLKTVAPPQSDVAPVEHQSLSHAADHHVITINHTQ 397

[Close]
BLAST of HG10007625 vs. ExPASy TrEMBL
Match: A0A5A7UR04 (Aluminum-activated malate transporter 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00250 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-06
Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 0 

Query: 1   MAIRDIIISPALAKSHIKIAKEKAEELMSFLTTSHF---NGDMKMVSTTTLILLLIDCLS 60
           +A+R +++ P  AKSHI+ AK  AE+L S L    F   N  M++V   +L  LL D + 
Sbjct: 347 LALRKMVL-PLTAKSHIEKAKVAAEDLKSHLEEWRFEEVNNAMEIVQVVSLASLLFDTIC 406

Query: 61  CVEKIADSIREFVSLARLKTVLKQAGVTPTEQ 90
           C+EKI DS++E  S+A  K V  Q+ V P +Q
Sbjct: 407 CIEKIVDSVQELASMAGFKAVEVQSSVAPEQQ 437

The following BLAST results are available for this feature:
BLAST of HG10007625 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038880423.15.2e-3480.77aluminum-activated malate transporter 2-like [Benincasa hispida][more]
KAA0055916.11.0e-2975.47aluminum-activated malate transporter 2 [Cucumis melo var. makuwa] >TYK28119.1 a... [more]
XP_004139137.19.5e-2873.58aluminum-activated malate transporter 2 [Cucumis sativus][more]
KAE8653542.19.5e-2873.58hypothetical protein Csa_006874 [Cucumis sativus][more]
KAG6588242.11.7e-2461.06Aluminum-activated malate transporter 2, partial [Cucurbita argyrosperma subsp. ... [more]
BLAST of HG10007625 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10007625 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DXG54.9e-3075.47Aluminum-activated malate transporter 2 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A0A0LZX94.6e-2873.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G630340 PE=4 SV=1[more]
A0A6J1KQZ31.1e-2463.39aluminum-activated malate transporter 2-like OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1DGA31.1e-1655.56aluminum-activated malate transporter 2-like OS=Momordica charantia OX=3673 GN=L... [more]
A0A5A7UR042.9e-0641.30Aluminum-activated malate transporter 2-like OS=Cucumis melo var. makuwa OX=1194... [more]
BLAST of HG10007625 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10007625.1HG10007625.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034220 ion transmembrane transport
biological_process GO:0015743 malate transport
cellular_component GO:0016021 integral component of membrane