HG10007118 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007118
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	39S ribosomal protein L45, mitochondrial isoform X1
Location	Chr10: 1454538 .. 1464682 (+)
RNA-Seq Expression	HG10007118
Synteny	HG10007118

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTCATAACCTCACGTGCACTCCAAACTCTGTTTCGCACACCAAAGAATCGACCATTTACCTCTCCGTAAGTATTTGTTTGTGTTTGGTTTCCAGGAATTTATAAAGTTTAGTGACTGATAGTATGGAAAAATGGAACTCTGTTTATTTTATAGTTGATTTTTTGGGTGATAACAATGCTCAGCTAGGTAATTGCAGTCTTTTGAGTATAATGCGTTTATTCAATGATTGTTTAGCTGGTTGGAAGAAGTAAAATTCTGCTGGAAGATTGGAAATGGAATGTATCATTTACTTGAATGCAGTTTATTTTCTTTACATACTGCTAACTGCTGTGTGATTGTTATTTGGAATTTTCGTTCTATATTCTCATTTTCTTGGCAACATTGACAGGGGTGATTGTTTTATCCTTTCCTTTTTCCGTAGTGAGAATTGAATATGCTTCATCTTCTTATTTTGATCTGACAGTGTTATTGTAAATTGTCTAATGCTCAGGCTTGGAAGTTCAGCAAACTATTCATGTGGCATTACTAATGGTAACTTTGATGATTATTTTATTTTTTTGTTTCTAAATATGCTTATACTTAGATGCTGAATTTTCCTTAATATTAATATGGTTTTTGGTTGGATCAGTTAGTCAATTGGGTATTCAGAAAACTTCCTCTTTCCTCAGTAACAGTCACTCTGCTTTTTCACTGGCTCGGGGACATAAAATGATAATATGTTCTGCAGTGGTAGTTTCCTGAACTTACACCAGTTTGTTCCATTTTTGTTTCAATGCAACAATATTTATATCAGCGATAGAAATCTTGTGGAGGGTATTCTTTTTTTCAGGTTAATCAAAATTCTTCTTTTTCTTCTTCATCATTTTATTTTAATTTAATTTTAAAATTACTTAGGCTGCCGAGTTTTCAGTATTCTCGCATGGCATTGCCATTAGGTTGGTGACAACACAAGCAAAAGCACCTGCACAAGTACGTCAAATGGTGAGTTTATTTTTGCTTAGTTGACGACGTTTTTGTTCCTTCAAGTCAGTTCCAGTGGGATACTATGATTAAATTCTGAATAATTCTGGTTATCTTGTTAAAAATTTGTTTTACCATTTACTTAATTAATTCTGTTACACATGAAACAAACTCCTAGTGAATGCAGATTATGATAATTGATTGATAATTAGCTTTCCTATTTTGAAAATGTTGCTTGTTTATCTTTTTACATTATAGTTTTCTTTTCCTAAAAAAAACTTTTTTTATTATTTTTTTATACGATAGGATTGATATGATATCATGTAAAAAGATAAATATGCCTTTTGTTTTATGAGAAACCGAGCTTTGATTGAGAGAAAATGAATGACTACATTAGTCCAACGGGAGAAGTAGACCCTAACTATATCAAATAATATTCTAGTTCAAAATAAGAACTTCCGAGCTTTCATTTAGACCAAAACCAAAAAGTATTATAGTTCAAAATAAGGCCTAACAGGTAATTAGAAAAGTCCTTGGAGACTAACAGCCAAGTAGAGGCATTAAGCATAACAAGGGACCGCACCTTCTCTAGGGTCTCTCCTAATGACATGATTGACATTACAAGTGTAAAGAATGGATACCTCGTTAGAATTTTCTCTATGGATAAGAATGAGGGTCTCTTTCAACCAGTCTAAACCATCCAATTTTATTCATTCCACGTTGTTCTTGCACCAAACATCTTAAAATAATCATTGGTATGAGAAATACTAATATCAATTTACCTTAAAAGTTCAACTTTTATTGACAAATAGCAGAATGTTAAAATTCTTTCATGTTTTAGTTTCTTTCACCATCCTTTTCATTGAAAATGAATTGTCAAATATTTTAGTTTTTCATTTCCTGGCAAACATCTCTTGATACTTTTGTTAAATCATGCTTGCAGGGCGCCCTCAAAGTTTCCATGTTGAGCCCTGGATTCATCTATGAACCTTATGCACCCCGTCAACAAATCCCATTTTGGCAAAGGTTAGTTGAATTCTAACAACTATTTTTCGATATTTGATATTATCTCATTCTACACTCTTCTTCCAACAACCAGAAAATAAAATAAAATAGACTTATGCAAATCAAACTGATTAGAGGTGATAGACTTGTCATTCAATCTCAATTATGTTGGCAAACATTTACCAAATACTTTCAATCTCAACACTACTAGTACCACTTGTGAGTAATTACTTTTGATACCGAATTCCCTTATGCTCCAATTACCCTTTATACTTATTTTGCGTTTGGATTTTGGTTAAATTACTATTTCTTTAACTTAAATCCCCACTTAACTCAAAAGCTTAAGTTGATAGTTATCTTAAATTTAATCTTCTTTTAACCCCTCCCCCCTCTCTTGTGGGCTCGAAAATATTTATTTCTATTTTAGTATTTTTGGAGCTTGTCATTATTTATCATGTTTTGAGCACCTTTAATGTTTCTATGTCAGATGGTTCACAAGAAGTGGTTGGAGAAGAACAAAAGACGATATCATTATAGAGGTGAAATTGTGCCATTTCAGCCTTTGGATTTTGAGCTATTATGCTGCAACTGCAAGTTCTTATAGAAAAAGAGATTGTTCTGCGAGTTAACTTATTTATCAGGGTTGTTTTAAGGTTGCAATGCCCAATGTTCAGTCTTGTACTTCCCTCTCCCTTTTTCCTGGTTTCTTTTCTGTCTAAGCTTTAGAATTTATCCTTTATTTGTTGCATGGCAGAATGAAGTACTGATTAGGGAGATGAGATGGAGAGGGTGTGCATCGATCAGAAGGTGTTTCACCTTCAAAAAGGTGGTTGTGAAAGGTGTGTAAAAGATCATAAGGGAACACAAGTGGAGAGCTTGGATCTGGAATTGGGAACGGTAGCTTTTCTCAGGGATTGCTTGGGGGCAGCTTTTGAGCTAGACATCCCATTAGGTTTTTGATGGAGAAGAAGGTTGGAATCATTAGTGATCTTCTTCCAAGTTCTATTGAATGCGAATGATAGATTTGGTATAGCTTCTTTGGAAACGTGTAAAGAGAAGAGGACTTCTGGTAGGGGTAGGGGTTGATTCTTCCTTGTCTCGGCTTTTATGGAATTAGTTCCTGCGTTTGGGGCTAAGCAGCTGACGGATCACCTAGGGAAAAGGGTAAGATGTTTGGGGTCACGACCGCACTTTTTTGAGACACAAAATAATCACGTGGCGCTTGCTCTGCCTCTCGCCCTTGAGCAAGTCAACCAACTTAAGTTTGGGATGTTGGTGCGAGAACGAGATCATTCAACCTCCACCCCGTTTTTGAGAAGGCAATTTTAGAAAATGGGATTAAAGAAATAGGTTTTGGAAATCATTCAAAAATGTTTGAAAAAATATATGTTGTAGGTTAGAAAGTATATAAGATAAACAACTTTGATACCATACAATCAAGGTAGGAAGGATGACAAAACTAGTCTTACCTGCTATAATACATTTCGAAGCATATGCAATGTGTCACTCTTGCACATGGTAAGTAGCAAGGAGTCATACATTAACAAAAAGGCAAGGAAAATAAACTAGTATGCAAAATGAAAGCATTTAAGGAAGGGTTGTTATGGGTATGTGGTCACGAGCAACATGCATTGGACAAGTATGATCATGACATTTGACACCTAAACTTTAGCTTGGCAAAAGAAGTTGGAGATCCTTGTTACTACTATTGAAAGAGAGGTCAAGTCAGAGTAAGGTTCAGAGTTTGACTTTGTCTTTGACTATTACTTGTTATAATCATTTGAGATTTAGCGAGATGATATTCTTTCTTTGGAGCTATGACTTTGCATCAATCTAGAGTTGTTTCTTTGAGGAGTTTGGCCCTAGAGGTTGTAGAGATGATTGATGAGTTCTTTCTTTACCCACCCTTTTGCGAGAAGAGGACGTTGTTTTTGTGGTGAGCTTGGGTTGTGTTCTGTTTTGTGGGGCTCTTAGGGTGAGAGGAACAATAGAATCTTTTGAGAGCTTGAAAGGAATTTGGTTGATGTTTGGTCTTTTTTAAGGTTCCATGTTTCTAGCTTTGGTGGCAAATCATTTTTGTAATTGACCTTTATGTCGACCTTATTTTACTTGACTTGAGCCATTTTTAGTTTGAAAAGTTTGGTTATTCATAAGAAAATAACTTATCACTTGATCACCTCCTGAAAAAATTTCTGCTCAATATAAGTTGGCTGCTTTCTGATGTGAACTTTTGTGTTCTGATTTATTATACAAGAACTTGTGCTCATGTGTGGAAGTAATAGATAAAGGCCATCTAAGTTTCGTGGGGTGTGCCTAATAGAGCCATGTTGTTCTTTTTTTACAGCTAAAAAGTGCTTATGCAATTGCAAAATTAAGAAAGAAGGGGTACTCAAAGAAACAATTCTATGAAGAGGCAGTAAATTTATATAAAGAGGTAGTCCAGATTCTTGTATCACAATACTGGTTTACAAAGTGCTTTATGAAACACATCGTCATTTTCTTTCAGTAAGTTCGAACACTGTGTGGAAAGAACCTACCTGGCTTTTTCATAATTTGTGGATGAAAATTGATGATTGTAAGGTCCAATAGTTGCTTTTGCTTCTTTTGACAACTGTTTCCTCTGTGGAAAGAACCTACCTGGCTTTTTCTTAATTTTGTTTCTTGAAACAACTTTTTCATAATTTGTGGATGGATATTCAAGTTTGTAAACTTCTTCATGGTCTAAGAGATTGCTTTTGCTACATACTGTAAAGTTGTTATATTATATGAAAAAAAAGTTTGCTTTTGCTTCCTTAATTCTTCTTGGAGAAGTACCTGGGGATGGGGACAGTACACAAATTGTTTTCTGAAACCAATTTTCCAGACAGGGTTTTGGAAGGCCATCACCGTTGTATACTCGTTAACATTGCTTTTAAAGTAACCCTTTTATAGTTCCATAATTCTATTACAATTCTGTCTTCTCCTTTCCGGAACTTGCTTACAAAAGATAAGTTGTGGAGATATTTTTATGGAAACTGGGAAATTGCTGTGGTAATTCATGCATTTTCTGGTTTTCTTCAAACGAAGGTTGTTATGTGTAAGGAGAAAAGGTCATGTTTGTTTACCAACGACCAGATGCCTACCTTTTCATTTTATCTACTTTTTATTTGTTTTAAAATTGCTGACCCTTGATTTACACATTCTCCAGATAAACACTTTGATAGCAAATGGTGACAAAACATCGTTGAGGAAAGCAGTCACAGAGAATATGTATTCAGTACGCATCACCTTTTCCTTTTGCTTTTCATCTTATGGCTGCTTTTAGATTGAGTTCTCTTTCCCACGTTTTCTTTACTTGCTCTCATATATTAATTATACAGATCCTATTTTTTTGACAAGGAAACAAATTCTTTGTTGGATTTGTGACTGATTATGCAGATTTTAACTTATTATCTTGGTCTCACCTTCAGGCATTGAAGAATGAAATTAAACTCAGAGAATCCAAATGGAACAAAGTTTACTGGGAAATGATTGTTCCAGTTGTTAAGATTCGCACATTACGAGCTAGATTGGCAAGTACTATAATCATCACATTGCTGTCTGTCCTATCCTATTCATGCATTTGTCAAGTTCCTCCTTTAACTTGTATGGTTACTCAGCTTTAAAAGCTCATGCCAGCATGAAAGTAGAAGGTTATTTATTTTTGGCTGGATATATGTGATGGTCTGGTCTCTAATATTGGGTATATTTTGTCAATTATCCCTGTTGTTTAATTATAGGCTAACTCATATTTACAGCAGTTGAGCTTCTTCTTCTTCTTCTTTTCTTTACCTGTTGGCGTGTGGGGATATCTCATCTACCCTTCTTTTTGTAATTTCCACAATGATGAATGTCATGTTTCTTCTAATTATTATTATTTTTAAAAAGTTCAGAAGCATGTAATTAGGCCAACAATTGTAATGCCCATTCCTCGAGAGAACCACTCACACTAATACCCATGAGTTGAATGGTTCAAACTATCTACAGTGGTCACAGAGTGTATTCAGTTCATTGTTAACGAGTGTAGTTTGCTTATATCCAACTTGTAATTAAAAACTTCACTTTTTTGAGTCTAATGCTGCCAGGTTGCCACCACTTAAAAATTTAGAATGGTTTGTCTAAGCCATATAATTTCTACATTTGTTGAGCTTTTTAAATTATTGTGGTAGAGCAAAATCATCAACATGATCACTAGCTAATTTCCTCAAAGTGGAAATGTGTGCCTGTTGTTTTGGTTTGATTGTAATACTATATTTGTTCTTTTCCCTGCATGTGCAGATCGGTGTTGATCGAAGCGACCTTGAAAAGGTTTTTGTACAGCTTACCCTTGAGATTCTTGCCAAACAGGTATACTGAGAATTAATACCTATTCTTGTTCTCTTACTCAACAGTTTCATACTATATGTGTATGGAACTGTGTGCCTTTGCAATCTGTGAAATATGGTGCCTTTTGCACTAATTATTGCTAGAAATCGTGGCAACTAGTGAGGCCCAAATGAGAATAACCCCATTTATAAGTGTTGATCTTCGGATATAGTAATCACTTGGGTTGAATTGGGGAATTGTGATAAAGGAATTGCCTCAATTATGCATGACATGAGAGCTCCCTCACGGTAGGTGAATTTCACTGACAATCAGTGTTTTTAAATGCCCAAGGCGCAAGGCGTGGACTTTTTTTTTGTGAGGCGCACTATATATAAAAATATTACATTAAAAAGAGAAATCATAGTTGAGGTGGAAATATGAAAAAAAAAAAAAGTCCCTAGACACAAGAAATTTTGCATTTAGGCTTAGTAAACTTAATTCTTTTAGTTAATGAAGAAGGAAAACCCTTAATTATTACTATTTTTTAAAAATAATGAAAAAGCTCCAAGGCTCCGGGCTTTGAGCCTTGGGGCTTCACAAAAGGTGTTCGCCTGAGGCGTGCCTTATTTTGTGAGCCTCGCCTTTCCAAGGCGAGGCGCAAAACCTGCACCTTGAGCCTAGGCTCGTGCCCGAGAGGGCTTTTTAAAACACTGCTGACAATAATAAGAATAACCCCAATTATAAGTTGATAAATAAATGAAAAAATGTTAGACAGATTTACTTTAAGAGATGATCAATGATCAAGAAGAAAGGAGAACTTGTTTTATCTTTAAAATTTTAAACTCTCCACAATCTAATTGATCAAACTAGATTGAAATTTTAAAATATGTATTCTAAAAACAAAATTCAAAGTTGTAAACAGGGTTATTTATATTCAAGGAGTTTAGGATCACTTTTTGTTTGCCAAAAGAGGGTCAATGATTAGCTTGTGGAAGTGCTAGGTGGTTGGTACATTAAAGGAAGAGGGATGATCCTTTGGCCTTGTGCTACTTGAGCCCTTTTGTGGTATCCTTGGAAATGAAGGAACCGACGGATCTTAGAAGATGAGCTTTTGCATTTCAATTTTTTTTTTTAATTTTATTCTTAATTTCTAAAAATTTTATAAGAACTTTCATTAATAAAAAAAAATGAAAGAATACATAAACATATAAACAACCAAGCCCTACAAAAATAAGAAGCCCAACTAGAGGAAGAAGCTCCATCTATACAAAATAGTACATAATAGAGCAATTTACAAATGATCTTCAACTTTGAAGCCTACATGTAAGCATGAAATCTAATAAGGGACCGAACATCACTAGGATCCCTCCCTAACCTACTAAAGACTTGGTTATTCCACTCATCCAGAAGATCCCACAAAATAGCACATACACTAGCAAGCCATAAACAACGACCCTTGTGACGAAAGGGTAGATGGAGGAGGAACTCTCTGATCATATCACAAGTATCCCTATGTCAAGCTAGTGAGAAGCTAGATCTTTGAAAATAGTATTCCACACGGTTCTTGCAAACTCCCATCTCTAAAAATGTGATCCAAGTCTTTCTCCGCCTTCGGATAGAGAGTACAACAAAACGTACCAACTAATGGGGGCATCTTTCTCACAAGTCAATCCATAGTGTTAGCACATCCATGTAAAACTTGCCAGGCAAAGAACTTAATTGTCCTTGGAATCTTTATCTCCTTAAGAATAGAGAAAACTGACTCACATAAAGGAGAAGGACCTAATAAACTATGAAAAAAGGAATTACATGAGAATCCCTCCGAAGAGTTCGTACTCCACACATGAATATCCTCTCTCCCAGTTTGATGACTAAATTCTTGTCCTTGCAACATAGAACTCATGGTTGTGCACAATTCACACAAAATTCTTTTTGAATTATAGCCTTTCCATGATTATTAACAATCGGAAGACTTTCCTTTAGGAAAACTTTGGGGAAGTCAAACTCTGGGGAGATATTCTTTTGTCTATGAGTGAATGTATTTCTTTAAGAGAGACTAAACTTTTCATTCAAATAATGAAAATCAATTAATGCTCAAAAGATACAAACTCTACAAGTGAGTGATAAAATACGAAATATGAAAATTAGAAAAGATTACAAGGAAAAATGAAAGCATTCTAGTTTAAGCAAATATTATGTAAAGAAAAATCAACAAAAAGTTTAGAAAGACACCAGCAAGATGAAGCCTTTGATCGTGAAGATTCAAAACATTTGAGCCAAAGAAGATACTTGTTATGAAAAATCCTTTAATTCCTTTACGACCATAGTTCACATAAAAGAGCTTCGACTGTGTTGACCCATAGAAGTTGTCTTAGGAGGCAGTGAAGGGCCAATTATGAGGTAAATGGTGTTTTCCTTAAAACATCCCAAGAAAACCCATAAAATGTTGAAGGCTAAAAAGGATTTAAACCAGCCCTAGAATATGAGCATCTGGAAAACACATGGTTGAGAACATCATCGGCCTCAAAACACACTGAAATGATACATCTATATAGTCTAAGTTCAGCCCACAATCGTTAAAGGCCATACACTAACCGTCTTAAATGCATGAATGAAGTTGATACATAATGCATTAAGGATGTGAATGAATATGGATTTTTAGATTCATAATGCCTCATGAATGGATTGATGCCTTATCATGCTTGAATGGATGCAACTCTTCACTATTTGTTGGCACTTGAGATCACTATTGGTAGACACTTGAGCTTGGAAGTCAGAAATCAATGCTTCTTCTAGTCTTTTGCTCTAGCTCGTCACTAACCTTATGGCATAATGATTGTTTCATGATTGGGTTGAATTGGAGTTGGCTTTCATTTACTTTAAACAATTGAATTGGTTTTCTTTTTCCAAAAAGACTTTAAACAATTGAAGGATCTTATTAGTAAAGGCCTAGTAGCGACATAAATTGTTTCTGAAAAAAAAACTTACAAGAGAAATGTTTCTCCAAGTCAATATGTCGCTACTAGGCCTTACAAAACATTTAGTAGTAGTAACTGAGTATGTAGTACATGTCACGTGACTTGGTAAACCATTTAGATTCATGTTTCCATCCTGCTCTGGACTTTTTTTAAACCCATTCGTGACAAACTGTTTTGTCCTTTTTTTTTCATTTCATCAACAAAAAACCTTGCTTCCTTTTTTTTAAAAAAGAAAATTTACAAGAGAAATGTTTCTTCAAATCAATTTATGAAGATGCTCAAACAGTTTAATTGTGTTTTCAATTATATTAGTTCATACAGTTTAATTAGGAATATGAAAAGGTTTAAATTATGAACTAAGATTTCTTTTTTTTCATCAAAGATTTCTATAAATTTGATTCCCTTGTAGTATTCTAAGCTTCTCTCTTCTTATGAAGATGCTCACTGATATAAACTTGCATTTGTAGAAGTTTGAAGCATATAATTCTGAAGGTGCTGTCGTTGCTGGAGATAAATCTAAGGAGGTAACTGCATGTTATATCGTCCTAATTATATCATATTTACTCCCCATTTCGATTAATGTTTGTTTACCATAGTACAGAAGTTGGGATCATTGAAATTAAAACGTCACTAAGGGCATGTTTGATAATGTTTCTATTTTTGGTTCTTTATTTCTTGTTTCTAATTATCGAGAAACGGTGGCATTCGAGAATTGTTCTTGTTTCTTGTTTCTCATTTCTTTCATGGTAACAATTTTGATGATATGTTATGCGCTACTCTTTTCAGGTGCTTGTCCGTGATATATGGGTATTTGAGAAATCTCTTTTTCACGAGGGAGCTTTTTGGCGTCTCTGTGGGCGAATTCCTATCTAA

mRNA sequence

ATGAATTTCATAACCTCACGTGCACTCCAAACTCTGTTTCGCACACCAAAGAATCGACCATTTACCTCTCCGCTTGGAAGTTCAGCAAACTATTCATGTGGCATTACTAATGTTAGTCAATTGGGTATTCAGAAAACTTCCTCTTTCCTCAGTAACAGTCACTCTGCTTTTTCACTGGCTCGGGGACATAAAATGATAATATGTTCTGCAGTGGCTGCCGAGTTTTCAGTATTCTCGCATGGCATTGCCATTAGGTTGGTGACAACACAAGCAAAAGCACCTGCACAAGTACGTCAAATGGGCGCCCTCAAAGTTTCCATGTTGAGCCCTGGATTCATCTATGAACCTTATGCACCCCGTCAACAAATCCCATTTTGGCAAAGATGGTTCACAAGAAGTGGTTGGAGAAGAACAAAAGACGATATCATTATAGAGATAAACACTTTGATAGCAAATGGTGACAAAACATCGTTGAGGAAAGCAGTCACAGAGAATATGTATTCAGCATTGAAGAATGAAATTAAACTCAGAGAATCCAAATGGAACAAAGTTTACTGGGAAATGATTGTTCCAGTTGTTAAGATTCGCACATTACGAGCTAGATTGGCAAGTACTATAATCATCACATTGCTGTCTGTCCTATCCTATTCATGCATTTGTCAAGTTCCTCCTTTAACTTGTATGATCGGTGTTGATCGAAGCGACCTTGAAAAGGTTTTTGTACAGCTTACCCTTGAGATTCTTGCCAAACAGAAGTTTGAAGCATATAATTCTGAAGGTGCTGTCGTTGCTGGAGATAAATCTAAGGAGGTGCTTGTCCGTGATATATGGGTATTTGAGAAATCTCTTTTTCACGAGGGAGCTTTTTGGCGTCTCTGTGGGCGAATTCCTATCTAA

Coding sequence (CDS)

ATGAATTTCATAACCTCACGTGCACTCCAAACTCTGTTTCGCACACCAAAGAATCGACCATTTACCTCTCCGCTTGGAAGTTCAGCAAACTATTCATGTGGCATTACTAATGTTAGTCAATTGGGTATTCAGAAAACTTCCTCTTTCCTCAGTAACAGTCACTCTGCTTTTTCACTGGCTCGGGGACATAAAATGATAATATGTTCTGCAGTGGCTGCCGAGTTTTCAGTATTCTCGCATGGCATTGCCATTAGGTTGGTGACAACACAAGCAAAAGCACCTGCACAAGTACGTCAAATGGGCGCCCTCAAAGTTTCCATGTTGAGCCCTGGATTCATCTATGAACCTTATGCACCCCGTCAACAAATCCCATTTTGGCAAAGATGGTTCACAAGAAGTGGTTGGAGAAGAACAAAAGACGATATCATTATAGAGATAAACACTTTGATAGCAAATGGTGACAAAACATCGTTGAGGAAAGCAGTCACAGAGAATATGTATTCAGCATTGAAGAATGAAATTAAACTCAGAGAATCCAAATGGAACAAAGTTTACTGGGAAATGATTGTTCCAGTTGTTAAGATTCGCACATTACGAGCTAGATTGGCAAGTACTATAATCATCACATTGCTGTCTGTCCTATCCTATTCATGCATTTGTCAAGTTCCTCCTTTAACTTGTATGATCGGTGTTGATCGAAGCGACCTTGAAAAGGTTTTTGTACAGCTTACCCTTGAGATTCTTGCCAAACAGAAGTTTGAAGCATATAATTCTGAAGGTGCTGTCGTTGCTGGAGATAAATCTAAGGAGGTGCTTGTCCGTGATATATGGGTATTTGAGAAATCTCTTTTTCACGAGGGAGCTTTTTGGCGTCTCTGTGGGCGAATTCCTATCTAA

Protein sequence

MNFITSRALQTLFRTPKNRPFTSPLGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLARGHKMIICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPRQQIPFWQRWFTRSGWRRTKDDIIIEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITLLSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIPI

Homology

[Close]

BLAST of HG10007118 vs. NCBI nr
Match: XP_008450683.1 (PREDICTED: 39S ribosomal protein L45, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 481.5 bits (1238), Expect = 5.3e-132
Identity = 255/327 (77.98%), Postives = 264/327 (80.73%), Query Frame = 0


Query: 1   MNFITSRALQTLFRTPKNRPFTSPLGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA 60
           MNFIT R+LQTL+RTPK RPFTSP+GSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA
Sbjct: 1   MNFITLRSLQTLYRTPKIRPFTSPIGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA 60

Query: 61  RGHKMIICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPR 120
           RGHKMI+CSAVAAEFSVFSHGI +RLVTTQAKAP Q RQ  ALKVSMLSPGFIYEPY+PR
Sbjct: 61  RGHKMIVCSAVAAEFSVFSHGIGVRLVTTQAKAPPQARQKVALKVSMLSPGFIYEPYSPR 120

Query: 121 QQIPFWQRWFTRSGWRRTKDDIII------------------------------EINTLI 180
           QQIPFWQRWFTRSGW+RTKDDII+                              EINTLI
Sbjct: 121 QQIPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAAILYKEINTLI 180

Query: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITL 240
           ANGDKTSLRKAVTENMYSALKNEIKLRESKW+KVYWEMIVPVVKIRTLRARL        
Sbjct: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLRARL-------- 240

Query: 241 LSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 298
                             IGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE
Sbjct: 241 ------------------IGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 300

[Close]

BLAST of HG10007118 vs. NCBI nr
Match: XP_004135632.1 (uncharacterized protein LOC101211143 isoform X1 [Cucumis sativus])

HSP 1 Score: 476.9 bits (1226), Expect = 1.3e-130
Identity = 253/327 (77.37%), Postives = 262/327 (80.12%), Query Frame = 0


Query: 1   MNFITSRALQTLFRTPKNRPFTSPLGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA 60
           MNFIT R+LQTL+RTPK RPFTSP+GSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA
Sbjct: 1   MNFITLRSLQTLYRTPKIRPFTSPIGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA 60

Query: 61  RGHKMIICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPR 120
           RGHKMIICSAVAAEFSVFSHGI IRLVTTQ KAP Q RQ   LKV+MLSPGFIYEPY+PR
Sbjct: 61  RGHKMIICSAVAAEFSVFSHGIGIRLVTTQVKAPPQARQKIGLKVTMLSPGFIYEPYSPR 120

Query: 121 QQIPFWQRWFTRSGWRRTKDDIII------------------------------EINTLI 180
           QQ+PFWQRWFTRSGW+RTKDDII+                              EINTLI
Sbjct: 121 QQLPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKKFYEEAANLYREINTLI 180

Query: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITL 240
           ANGDKTSLRKAVTENMYSALKNEIKLRESKW+KVYWEMIVPVVKIRTLRARL        
Sbjct: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLRARL-------- 240

Query: 241 LSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 298
                             IGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE
Sbjct: 241 ------------------IGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 300

[Close]

BLAST of HG10007118 vs. NCBI nr
Match: XP_011659907.1 (uncharacterized protein LOC101211143 isoform X2 [Cucumis sativus])

HSP 1 Score: 470.7 bits (1210), Expect = 9.4e-129
Identity = 252/327 (77.06%), Postives = 261/327 (79.82%), Query Frame = 0


Query: 1   MNFITSRALQTLFRTPKNRPFTSPLGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA 60
           MNFIT R+LQTL+RTPK RPFTSP+GSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA
Sbjct: 1   MNFITLRSLQTLYRTPKIRPFTSPIGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA 60

Query: 61  RGHKMIICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPR 120
           RGHKMIICSA AAEFSVFSHGI IRLVTTQ KAP Q RQ   LKV+MLSPGFIYEPY+PR
Sbjct: 61  RGHKMIICSA-AAEFSVFSHGIGIRLVTTQVKAPPQARQKIGLKVTMLSPGFIYEPYSPR 120

Query: 121 QQIPFWQRWFTRSGWRRTKDDIII------------------------------EINTLI 180
           QQ+PFWQRWFTRSGW+RTKDDII+                              EINTLI
Sbjct: 121 QQLPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKKFYEEAANLYREINTLI 180

Query: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITL 240
           ANGDKTSLRKAVTENMYSALKNEIKLRESKW+KVYWEMIVPVVKIRTLRARL        
Sbjct: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLRARL-------- 240

Query: 241 LSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 298
                             IGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE
Sbjct: 241 ------------------IGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 300

[Close]

BLAST of HG10007118 vs. NCBI nr
Match: XP_038879465.1 (uncharacterized protein LOC120071330 isoform X1 [Benincasa hispida])

HSP 1 Score: 458.8 bits (1179), Expect = 3.7e-125
Identity = 250/327 (76.45%), Postives = 256/327 (78.29%), Query Frame = 0


Query: 1   MNFITSRALQTLFRTPKNRPFTSPLGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA 60
           MNFI  RALQTL+R+  NR F S LGSSANYS GITNVSQLGIQKTSSFLSNS +AFSLA
Sbjct: 1   MNFIALRALQTLYRSANNRAFASWLGSSANYSRGITNVSQLGIQKTSSFLSNSRTAFSLA 60

Query: 61  RGHKMIICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPR 120
           RGHKMII SAVAAEF VFSH I IRLVTTQAKAP QVRQMGALKVSMLSPGFIYEPY+PR
Sbjct: 61  RGHKMIISSAVAAEFPVFSHDITIRLVTTQAKAPPQVRQMGALKVSMLSPGFIYEPYSPR 120

Query: 121 QQIPFWQRWFTRSGWRRTKDDIII------------------------------EINTLI 180
           Q IPFWQRWFTRSGWRRTKDDII+                              EINTLI
Sbjct: 121 QPIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLI 180

Query: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITL 240
           ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL        
Sbjct: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARL-------- 240

Query: 241 LSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 298
                             IGVDRSDLEKVFVQLTLEILAKQKFEAY+SEGAVVAGDKSKE
Sbjct: 241 ------------------IGVDRSDLEKVFVQLTLEILAKQKFEAYSSEGAVVAGDKSKE 300

[Close]

BLAST of HG10007118 vs. NCBI nr
Match: XP_022968772.1 (uncharacterized protein LOC111467908 isoform X1 [Cucurbita maxima])

HSP 1 Score: 450.7 bits (1158), Expect = 1.0e-122
Identity = 244/328 (74.39%), Postives = 256/328 (78.05%), Query Frame = 0


Query: 4   ITSRALQTLFRTPKNRPFTSPLGSSANYSCGITN---VSQLGIQKTSSFLSNSHSAFSLA 63
           + SR LQTL+RT +NR FTS +GSSANYSCGITN   VSQLGIQKT SFLSN+H+AFSLA
Sbjct: 1   MNSRLLQTLYRTAQNRAFTSRVGSSANYSCGITNGGSVSQLGIQKT-SFLSNTHTAFSLA 60

Query: 64  RGHKMIICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPR 123
           RGHKMIICSAVAA+ S+FSHGI IRL TTQAKAP Q RQMGALKVSMLSPG IYEPY+PR
Sbjct: 61  RGHKMIICSAVAADLSIFSHGIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPR 120

Query: 124 QQIPFWQRWFTRSGWRRTKDDIII------------------------------EINTLI 183
           Q IPFWQRWFTRSGWRRTKDDII+                              EINTLI
Sbjct: 121 QPIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLI 180

Query: 184 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITL 243
           ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMI+PVVKIRTLRARL        
Sbjct: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARL-------- 240

Query: 244 LSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 299
                             IGVDRSDLEKVFVQLTLEILAKQKFEAYN+EGAVVAGDKSKE
Sbjct: 241 ------------------IGVDRSDLEKVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKE 300

[Close]

BLAST of HG10007118 vs. ExPASy TrEMBL
Match: A0A1S3BPQ8 (39S ribosomal protein L45, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492196 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.6e-132
Identity = 255/327 (77.98%), Postives = 264/327 (80.73%), Query Frame = 0


Query: 1   MNFITSRALQTLFRTPKNRPFTSPLGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA 60
           MNFIT R+LQTL+RTPK RPFTSP+GSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA
Sbjct: 1   MNFITLRSLQTLYRTPKIRPFTSPIGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA 60

Query: 61  RGHKMIICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPR 120
           RGHKMI+CSAVAAEFSVFSHGI +RLVTTQAKAP Q RQ  ALKVSMLSPGFIYEPY+PR
Sbjct: 61  RGHKMIVCSAVAAEFSVFSHGIGVRLVTTQAKAPPQARQKVALKVSMLSPGFIYEPYSPR 120

Query: 121 QQIPFWQRWFTRSGWRRTKDDIII------------------------------EINTLI 180
           QQIPFWQRWFTRSGW+RTKDDII+                              EINTLI
Sbjct: 121 QQIPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAAILYKEINTLI 180

Query: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITL 240
           ANGDKTSLRKAVTENMYSALKNEIKLRESKW+KVYWEMIVPVVKIRTLRARL        
Sbjct: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLRARL-------- 240

Query: 241 LSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 298
                             IGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE
Sbjct: 241 ------------------IGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 300

[Close]

BLAST of HG10007118 vs. ExPASy TrEMBL
Match: A0A0A0LWH6 (Tim44 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G570770 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 6.3e-131
Identity = 253/327 (77.37%), Postives = 262/327 (80.12%), Query Frame = 0


Query: 1   MNFITSRALQTLFRTPKNRPFTSPLGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA 60
           MNFIT R+LQTL+RTPK RPFTSP+GSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA
Sbjct: 1   MNFITLRSLQTLYRTPKIRPFTSPIGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLA 60

Query: 61  RGHKMIICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPR 120
           RGHKMIICSAVAAEFSVFSHGI IRLVTTQ KAP Q RQ   LKV+MLSPGFIYEPY+PR
Sbjct: 61  RGHKMIICSAVAAEFSVFSHGIGIRLVTTQVKAPPQARQKIGLKVTMLSPGFIYEPYSPR 120

Query: 121 QQIPFWQRWFTRSGWRRTKDDIII------------------------------EINTLI 180
           QQ+PFWQRWFTRSGW+RTKDDII+                              EINTLI
Sbjct: 121 QQLPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKKFYEEAANLYREINTLI 180

Query: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITL 240
           ANGDKTSLRKAVTENMYSALKNEIKLRESKW+KVYWEMIVPVVKIRTLRARL        
Sbjct: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLRARL-------- 240

Query: 241 LSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 298
                             IGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE
Sbjct: 241 ------------------IGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 300

[Close]

BLAST of HG10007118 vs. ExPASy TrEMBL
Match: A0A6J1HUF6 (uncharacterized protein LOC111467908 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467908 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 4.9e-123
Identity = 244/328 (74.39%), Postives = 256/328 (78.05%), Query Frame = 0


Query: 4   ITSRALQTLFRTPKNRPFTSPLGSSANYSCGITN---VSQLGIQKTSSFLSNSHSAFSLA 63
           + SR LQTL+RT +NR FTS +GSSANYSCGITN   VSQLGIQKT SFLSN+H+AFSLA
Sbjct: 1   MNSRLLQTLYRTAQNRAFTSRVGSSANYSCGITNGGSVSQLGIQKT-SFLSNTHTAFSLA 60

Query: 64  RGHKMIICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPR 123
           RGHKMIICSAVAA+ S+FSHGI IRL TTQAKAP Q RQMGALKVSMLSPG IYEPY+PR
Sbjct: 61  RGHKMIICSAVAADLSIFSHGIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPR 120

Query: 124 QQIPFWQRWFTRSGWRRTKDDIII------------------------------EINTLI 183
           Q IPFWQRWFTRSGWRRTKDDII+                              EINTLI
Sbjct: 121 QPIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLI 180

Query: 184 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITL 243
           ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMI+PVVKIRTLRARL        
Sbjct: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARL-------- 240

Query: 244 LSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 299
                             IGVDRSDLEKVFVQLTLEILAKQKFEAYN+EGAVVAGDKSKE
Sbjct: 241 ------------------IGVDRSDLEKVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKE 300

[Close]

BLAST of HG10007118 vs. ExPASy TrEMBL
Match: A0A6J1HZ27 (uncharacterized protein LOC111467908 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467908 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 4.5e-121
Identity = 243/328 (74.09%), Postives = 255/328 (77.74%), Query Frame = 0


Query: 4   ITSRALQTLFRTPKNRPFTSPLGSSANYSCGITN---VSQLGIQKTSSFLSNSHSAFSLA 63
           + SR LQTL+RT +NR FTS +GSSANYSCGITN   VSQLGIQKT SFLSN+H+AFSLA
Sbjct: 1   MNSRLLQTLYRTAQNRAFTSRVGSSANYSCGITNGGSVSQLGIQKT-SFLSNTHTAFSLA 60

Query: 64  RGHKMIICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPR 123
           RGHKMIICSAVAA+ S+FSHGI IRL TTQAKAP Q RQMGALKVSMLSPG IYEPY+PR
Sbjct: 61  RGHKMIICSAVAADLSIFSHGIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPR 120

Query: 124 QQIPFWQRWFTRSGWRRTKDDIII------------------------------EINTLI 183
           Q IPFWQRWFTRSGWRRTKDDII+                              EINTLI
Sbjct: 121 QPIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLI 180

Query: 184 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITL 243
           ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMI+PVVKIRTLRARL        
Sbjct: 181 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARL-------- 240

Query: 244 LSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 299
                             IGVDRSDLEKVFVQLTLEILAKQ FEAYN+EGAVVAGDKSKE
Sbjct: 241 ------------------IGVDRSDLEKVFVQLTLEILAKQ-FEAYNAEGAVVAGDKSKE 300

[Close]

BLAST of HG10007118 vs. ExPASy TrEMBL
Match: A0A6J1HC62 (39S ribosomal protein L45, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462108 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.7e-120
Identity = 240/328 (73.17%), Postives = 252/328 (76.83%), Query Frame = 0


Query: 4   ITSRALQTLFRTPKNRPFTSPLGSSANYSCGITN---VSQLGIQKTSSFLSNSHSAFSLA 63
           + SR LQ L+RT +NR FTS +GSSANYSCGITN   V+QLGIQKT SFLSNSH+AFSL 
Sbjct: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKT-SFLSNSHTAFSLV 60

Query: 64  RGHKMIICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPR 123
           RGHKMIICSAVAA+ S+FSH I IRL TTQAKAP Q RQMGALKVSMLSPG IYEPY+PR
Sbjct: 61  RGHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPR 120

Query: 124 QQIPFWQRWFTRSGWRRTKDDIII------------------------------EINTLI 183
           Q IPFWQRWFTRSGWRRTKDDII+                              EINTLI
Sbjct: 121 QPIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLI 180

Query: 184 ANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITL 243
           ANGDKTSLRKAVTE MYSALKNEIKLRESKWNKVYWEMI+PVVKIRTLRARL        
Sbjct: 181 ANGDKTSLRKAVTEKMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARL-------- 240

Query: 244 LSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKE 299
                             IGVDRSDLEKVFVQLTLEILAKQKFEAYN+EGAVVAGDKSKE
Sbjct: 241 ------------------IGVDRSDLEKVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKE 300

[Close]

BLAST of HG10007118 vs. TAIR 10
Match: AT5G27395.2 (Mitochondrial inner membrane translocase complex, subunit Tim44-related protein )

HSP 1 Score: 256.5 bits (654), Expect = 2.6e-68
Identity = 149/323 (46.13%), Postives = 195/323 (60.37%), Query Frame = 0


Query: 7   RALQTLFRTPKNRPFTS-PLGSSANYSCGITNVSQLGIQKTSSFLSNSHSAFSLARGHKM 66
           + +++L +T  +R  +S P G   +Y   + +V +   +   S L   HS       +  
Sbjct: 8   QTVRSLLKTAGSRESSSLPFGCWRSYHSSLCHVPEAHGKSAYSRLYEGHSV------NTH 67

Query: 67  IICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVSMLSPGFIYEPYAPRQQIPF 126
           ++ S + AEF  F +    R  TTQ KAP Q+++ GA++VSM+SPGF+YEPYA R++I  
Sbjct: 68  LLRSTMIAEFLPFMN--EKRSATTQVKAPPQLQKTGAVRVSMVSPGFVYEPYALREKISI 127

Query: 127 WQRWFTRSGWRRTKDDIIIE------------------------------INTLIANGDK 186
           W+R FTRSGWRRTK+D I E                              IN  +ANG+K
Sbjct: 128 WRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFYIEALELYKQINIQMANGEK 187

Query: 187 TSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIRTLRARLASTIIITLLSVLS 246
            ++RK VTE MYSALKNEIK RE+ W+ VYWEM+ PVVKIRTL+ARL             
Sbjct: 188 KTIRKNVTERMYSALKNEIKQREAMWDGVYWEMVEPVVKIRTLQARL------------- 247

Query: 247 YSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRD 299
                        IG+DR+DL+K F+QLTLE L KQKFEAY+++G V AGDK+KEVLVRD
Sbjct: 248 -------------IGIDRTDLKKAFIQLTLEFLTKQKFEAYDAKGNVAAGDKNKEVLVRD 296

[Close]

BLAST of HG10007118 vs. TAIR 10
Match: AT5G27395.1 (Mitochondrial inner membrane translocase complex, subunit Tim44-related protein )

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-67
Identity = 143/282 (50.71%), Postives = 180/282 (63.83%), Query Frame = 0


Query: 51  SNSHSAFS-LARGHKM---IICSAVAAEFSVFSHGIAIRLVTTQAKAPAQVRQMGALKVS 110
           ++  SA+S L  GH +   ++ S + AEF  F +    R  TTQ KAP Q+++ GA++VS
Sbjct: 60  AHGKSAYSRLYEGHSVNTHLLRSTMIAEFLPFMN--EKRSATTQVKAPPQLQKTGAVRVS 119

Query: 111 MLSPGFIYEPYAPRQQIPFWQRWFTRSGWRRTKDDIIIE--------------------- 170
           M+SPGF+YEPYA R++I  W+R FTRSGWRRTK+D I E                     
Sbjct: 120 MVSPGFVYEPYALREKISIWRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFY 179

Query: 171 ---------INTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMIVPVVKIR 230
                    IN  +ANG+K ++RK VTE MYSALKNEIK RE+ W+ VYWEM+ PVVKIR
Sbjct: 180 IEALELYKQINIQMANGEKKTIRKNVTERMYSALKNEIKQREAMWDGVYWEMVEPVVKIR 239

Query: 231 TLRARLASTIIITLLSVLSYSCICQVPPLTCMIGVDRSDLEKVFVQLTLEILAKQKFEAY 290
           TL+ARL                          IG+DR+DL+K F+QLTLE L KQKFEAY
Sbjct: 240 TLQARL--------------------------IGIDRTDLKKAFIQLTLEFLTKQKFEAY 299

Query: 291 NSEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIPI 299
           +++G V AGDK+KEVLVRDIWVFEKSLFH GA+WRLCGRI +
Sbjct: 300 DAKGNVAAGDKNKEVLVRDIWVFEKSLFHTGAYWRLCGRIKL 313

The following BLAST results are available for this feature:

BLAST of HG10007118 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450683.1	5.3e-132	77.98	PREDICTED: 39S ribosomal protein L45, mitochondrial isoform X1 [Cucumis melo]	[more]
XP_004135632.1	1.3e-130	77.37	uncharacterized protein LOC101211143 isoform X1 [Cucumis sativus]	[more]
XP_011659907.1	9.4e-129	77.06	uncharacterized protein LOC101211143 isoform X2 [Cucumis sativus]	[more]
XP_038879465.1	3.7e-125	76.45	uncharacterized protein LOC120071330 isoform X1 [Benincasa hispida]	[more]
XP_022968772.1	1.0e-122	74.39	uncharacterized protein LOC111467908 isoform X1 [Cucurbita maxima]	[more]

BLAST of HG10007118 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10007118 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPQ8	2.6e-132	77.98	39S ribosomal protein L45, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0LWH6	6.3e-131	77.37	Tim44 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G570770 PE=4 ...	[more]
A0A6J1HUF6	4.9e-123	74.39	uncharacterized protein LOC111467908 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HZ27	4.5e-121	74.09	uncharacterized protein LOC111467908 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HC62	1.7e-120	73.17	39S ribosomal protein L45, mitochondrial isoform X1 OS=Cucurbita moschata OX=366...	[more]

BLAST of HG10007118 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27395.2	2.6e-68	46.13	Mitochondrial inner membrane translocase complex, subunit Tim44-related protein	[more]
AT5G27395.1	2.2e-67	50.71	Mitochondrial inner membrane translocase complex, subunit Tim44-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007379	Tim44-like domain	SMART	SM00978	Tim44_a_2	coord: 118..297 e-value: 2.5E-8 score: 43.7
IPR007379	Tim44-like domain	PFAM	PF04280	Tim44	coord: 130..295 e-value: 4.2E-24 score: 85.4
None	No IPR available	GENE3D	3.10.450.240		coord: 122..298 e-value: 3.3E-32 score: 113.4
None	No IPR available	PANTHER	PTHR28554	39S RIBOSOMAL PROTEIN L45, MITOCHONDRIAL	coord: 141..204 coord: 44..142 coord: 228..296
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 239..296
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 122..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007118.1	HG10007118.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome