HG10006972 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006972
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein kinase superfamily protein
Location	Chr07: 23818558 .. 23818743 (+)
RNA-Seq Expression	HG10006972
Synteny	HG10006972

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTATGCACGTCCTAATGAGGTTAATTTGGTTGAGTGGCTAAAGACGATGGTAGCAACAAGAAGAGCAGAGAAAGTTGTGGACATGAACCTCAAGATCAAGCCAACTACTCGTACTTTGGAACGCGCCCTTCTTGTTGCACTTAGGTGTATTGATCCTGAATTAATCAAGACACCCAAATGA

mRNA sequence

ATGGATTATGCACGTCCTAATGAGGTTAATTTGGTTGAGTGGCTAAAGACGATGGTAGCAACAAGAAGAGCAGAGAAAGTTGTGGACATGAACCTCAAGATCAAGCCAACTACTCGTACTTTGGAACGCGCCCTTCTTGTTGCACTTAGGTGTATTGATCCTGAATTAATCAAGACACCCAAATGA

Coding sequence (CDS)

ATGGATTATGCACGTCCTAATGAGGTTAATTTGGTTGAGTGGCTAAAGACGATGGTAGCAACAAGAAGAGCAGAGAAAGTTGTGGACATGAACCTCAAGATCAAGCCAACTACTCGTACTTTGGAACGCGCCCTTCTTGTTGCACTTAGGTGTATTGATCCTGAATTAATCAAGACACCCAAATGA

Protein sequence

MDYARPNEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKTPK

Homology

[Close]

BLAST of HG10006972 vs. NCBI nr
Match: XP_008456348.1 (PREDICTED: probable receptor-like protein kinase At2g42960 [Cucumis melo])

HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18
Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP NEVNLVEWLK MVATRRAE+VVDMNL+IKPTTR L+RALLVALRCIDPE IK 
Sbjct: 388 VDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKR 447

Query: 61  PK 62
           PK
Sbjct: 448 PK 449

[Close]

BLAST of HG10006972 vs. NCBI nr
Match: XP_004145735.1 (probable receptor-like protein kinase At2g42960 [Cucumis sativus] >KGN46827.1 hypothetical protein Csa_020998 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18
Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP NEVNLVEWLK MVATRRAE+VVDMNL+IKPTTR L+RALLVALRCIDPE IK 
Sbjct: 384 VDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKR 443

Query: 61  PK 62
           PK
Sbjct: 444 PK 445

[Close]

BLAST of HG10006972 vs. NCBI nr
Match: KAA0054602.1 (putative receptor-like protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18
Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP NEVNLVEWLK MVATRRAE+VVDMNL+IKPTTR L+RALLVALRCIDPE IK 
Sbjct: 458 VDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKR 517

Query: 61  PK 62
           PK
Sbjct: 518 PK 519

[Close]

BLAST of HG10006972 vs. NCBI nr
Match: TYK27566.1 (putative receptor-like protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18
Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP NEVNLVEWLK MVATRRAE+VVDMNL+IKPTTR L+RALLVALRCIDPE IK 
Sbjct: 458 VDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKR 517

Query: 61  PK 62
           PK
Sbjct: 518 PK 519

[Close]

BLAST of HG10006972 vs. NCBI nr
Match: XP_038901517.1 (probable receptor-like protein kinase At2g42960 [Benincasa hispida])

HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18
Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP NEVNLVEWLK MVATRRAE+VVDMNL+IKPTTR L+RALLVALRCIDPE IK 
Sbjct: 389 VDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKR 448

Query: 61  PK 62
           PK
Sbjct: 449 PK 450

[Close]

BLAST of HG10006972 vs. ExPASy Swiss-Prot
Match: Q9SJG2 (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.8e-14
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DY RP NEVNLVEWLK MV TRRAE+VVD  L+ +P+   L+RALLV+LRC+DPE  K 
Sbjct: 385 VDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKR 444

Query: 61  PK 62
           P+
Sbjct: 445 PR 446

[Close]

BLAST of HG10006972 vs. ExPASy Swiss-Prot
Match: Q9LRP3 (Probable receptor-like protein kinase At3g17420 OS=Arabidopsis thaliana OX=3702 GN=At3g17420 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 4.0e-13
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP  EV++VEWLK MV  ++ E+VVD  L+IKPTT  L+RALL ALRC+DP+  K 
Sbjct: 356 VDYARPKEEVHMVEWLKLMVQQKQFEEVVDKELEIKPTTSELKRALLTALRCVDPDADKR 415

Query: 61  PK 62
           PK
Sbjct: 416 PK 417

[Close]

BLAST of HG10006972 vs. ExPASy Swiss-Prot
Match: Q8LEB6 (Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.5e-12
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 1   MDYAR-PNEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYAR P EV+LVEWLK MV  RR+E+VVD NL+ KP+T  L+R LL ALRC+DP   K 
Sbjct: 368 VDYARPPPEVHLVEWLKMMVQQRRSEEVVDPNLETKPSTSALKRTLLTALRCVDPMSEKR 427

Query: 61  PK 62
           P+
Sbjct: 428 PR 429

[Close]

BLAST of HG10006972 vs. ExPASy Swiss-Prot
Match: Q3EDL4 (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 7.6e-12
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DY+RP  E NLV+WLK+MV  RR+E+VVD  +   P+++ L+R LLVALRC+DP+  K 
Sbjct: 356 VDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKR 415

Query: 61  PK 62
           PK
Sbjct: 416 PK 417

[Close]

BLAST of HG10006972 vs. ExPASy Swiss-Prot
Match: Q6NKZ9 (Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana OX=3702 GN=At4g34500 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.2e-11
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 1   MDYAR-PNEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DY+R P E+NLV+W K MVA+RR E+V+D  +K  P  R L+RALLV LRCID +  K 
Sbjct: 349 VDYSRPPGEMNLVDWFKGMVASRRGEEVIDPKIKTSPPPRALKRALLVCLRCIDLDSSKR 408

Query: 61  PK 62
           PK
Sbjct: 409 PK 410

[Close]

BLAST of HG10006972 vs. ExPASy TrEMBL
Match: A0A5D3DV12 (Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00390 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-18
Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP NEVNLVEWLK MVATRRAE+VVDMNL+IKPTTR L+RALLVALRCIDPE IK 
Sbjct: 458 VDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKR 517

Query: 61  PK 62
           PK
Sbjct: 518 PK 519

[Close]

BLAST of HG10006972 vs. ExPASy TrEMBL
Match: A0A5A7UFP7 (Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004030 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-18
Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP NEVNLVEWLK MVATRRAE+VVDMNL+IKPTTR L+RALLVALRCIDPE IK 
Sbjct: 458 VDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKR 517

Query: 61  PK 62
           PK
Sbjct: 518 PK 519

[Close]

BLAST of HG10006972 vs. ExPASy TrEMBL
Match: A0A0A0KEI6 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139760 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-18
Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP NEVNLVEWLK MVATRRAE+VVDMNL+IKPTTR L+RALLVALRCIDPE IK 
Sbjct: 384 VDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKR 443

Query: 61  PK 62
           PK
Sbjct: 444 PK 445

[Close]

BLAST of HG10006972 vs. ExPASy TrEMBL
Match: A0A1S3C3Q0 (probable receptor-like protein kinase At2g42960 OS=Cucumis melo OX=3656 GN=LOC103496314 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-18
Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP NEVNLVEWLK MVATRRAE+VVDMNL+IKPTTR L+RALLVALRCIDPE IK 
Sbjct: 388 VDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKR 447

Query: 61  PK 62
           PK
Sbjct: 448 PK 449

[Close]

BLAST of HG10006972 vs. ExPASy TrEMBL
Match: A0A6J1I4L1 (probable receptor-like protein kinase At2g42960 OS=Cucurbita maxima OX=3661 GN=LOC111469588 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.5e-18
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP NEVNLVEWLK MVATRRAE+VVDMNL +KPTTR L+RALLVALRCIDPE IK 
Sbjct: 387 VDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLDVKPTTRALKRALLVALRCIDPESIKR 446

Query: 61  PK 62
           PK
Sbjct: 447 PK 448

[Close]

BLAST of HG10006972 vs. TAIR 10
Match: AT3G59110.1 (Protein kinase superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 8.0e-17
Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DY RP NEVNLVEWLK MV TRRAE+VVD  ++  P TR L+RALLVALRC+DPE  K 
Sbjct: 392 VDYERPANEVNLVEWLKMMVGTRRAEEVVDSRIEPPPATRALKRALLVALRCVDPEAQKR 451

Query: 61  PK 62
           PK
Sbjct: 452 PK 453

[Close]

BLAST of HG10006972 vs. TAIR 10
Match: AT1G56720.1 (Protein kinase superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.0e-16
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DY RP +EVNLV+WLK MV TRR+E+VVD N+++KP TR+L+RALL ALRC+DP+  K 
Sbjct: 381 VDYGRPAHEVNLVDWLKMMVGTRRSEEVVDPNIEVKPPTRSLKRALLTALRCVDPDSDKR 440

Query: 61  PK 62
           PK
Sbjct: 441 PK 442

[Close]

BLAST of HG10006972 vs. TAIR 10
Match: AT1G56720.2 (Protein kinase superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.0e-16
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DY RP +EVNLV+WLK MV TRR+E+VVD N+++KP TR+L+RALL ALRC+DP+  K 
Sbjct: 381 VDYGRPAHEVNLVDWLKMMVGTRRSEEVVDPNIEVKPPTRSLKRALLTALRCVDPDSDKR 440

Query: 61  PK 62
           PK
Sbjct: 441 PK 442

[Close]

BLAST of HG10006972 vs. TAIR 10
Match: AT1G56720.3 (Protein kinase superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.0e-16
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DY RP +EVNLV+WLK MV TRR+E+VVD N+++KP TR+L+RALL ALRC+DP+  K 
Sbjct: 381 VDYGRPAHEVNLVDWLKMMVGTRRSEEVVDPNIEVKPPTRSLKRALLTALRCVDPDSDKR 440

Query: 61  PK 62
           PK
Sbjct: 441 PK 442

[Close]

BLAST of HG10006972 vs. TAIR 10
Match: AT1G09440.1 (Protein kinase superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 5.2e-16
Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 1   MDYARP-NEVNLVEWLKTMVATRRAEKVVDMNLKIKPTTRTLERALLVALRCIDPELIKT 60
           +DYARP NEVNLVEWLK MV ++R E+V+D N+ ++P TR L+R LL ALRCIDP+  K 
Sbjct: 359 VDYARPANEVNLVEWLKMMVGSKRLEEVIDPNIAVRPATRALKRVLLTALRCIDPDSEKR 418

Query: 61  PK 62
           PK
Sbjct: 419 PK 420

The following BLAST results are available for this feature:

BLAST of HG10006972 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456348.1	2.3e-18	85.48	PREDICTED: probable receptor-like protein kinase At2g42960 [Cucumis melo]	[more]
XP_004145735.1	2.3e-18	85.48	probable receptor-like protein kinase At2g42960 [Cucumis sativus] >KGN46827.1 hy...	[more]
KAA0054602.1	2.3e-18	85.48	putative receptor-like protein kinase [Cucumis melo var. makuwa]	[more]
TYK27566.1	2.3e-18	85.48	putative receptor-like protein kinase [Cucumis melo var. makuwa]	[more]
XP_038901517.1	2.3e-18	85.48	probable receptor-like protein kinase At2g42960 [Benincasa hispida]	[more]

BLAST of HG10006972 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJG2	2.8e-14	64.52	Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LRP3	4.0e-13	61.29	Probable receptor-like protein kinase At3g17420 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8LEB6	1.5e-12	61.29	Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q3EDL4	7.6e-12	54.84	Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=37...	[more]
Q6NKZ9	2.2e-11	56.45	Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis ...	[more]

BLAST of HG10006972 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DV12	1.1e-18	85.48	Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7UFP7	1.1e-18	85.48	Putative receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0KEI6	1.1e-18	85.48	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139...	[more]
A0A1S3C3Q0	1.1e-18	85.48	probable receptor-like protein kinase At2g42960 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1I4L1	2.5e-18	83.87	probable receptor-like protein kinase At2g42960 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of HG10006972 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59110.1	8.0e-17	69.35	Protein kinase superfamily protein	[more]
AT1G56720.1	1.0e-16	64.52	Protein kinase superfamily protein	[more]
AT1G56720.2	1.0e-16	64.52	Protein kinase superfamily protein	[more]
AT1G56720.3	1.0e-16	64.52	Protein kinase superfamily protein	[more]
AT1G09440.1	5.2e-16	62.90	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47984	OS01G0323000 PROTEIN	coord: 1..61
None	No IPR available	PANTHER	PTHR47984:SF4	OS10G0497600 PROTEIN	coord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006972.1	HG10006972.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity