HG10006918 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006918
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NADPH-dependent pterin aldehyde reductase-like
Location	Chr07: 23271090 .. 23271509 (+)
RNA-Seq Expression	HG10006918
Synteny	HG10006918

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATTGTAACATTAGATCCTGGCATTATTAATACTGATATGTGTGTTTCTGCTCTTGGCCATTTAGCTTCTCATTACCAATCTCCTCAAGAATGGTATGCTAACAAATATTTCTATTTATTCTTAATCAAAATTATTTTAAATAAACAATCAACATGATATATCTTCTATTAATCATATGGAAAAACCCACCAACTATATAAACTTCAAGACTTTTAATTTTAAATAAACTAAATTTTGAACCATTAGAAACTATCTTTCTAGAAACCAATATGGTATTTTAATTATGAGTATATATTCAATGTTTAATGTGTTTGTGCTAGGGTTCTCAAAGCAGCTCCAATGATTCTAAATATTACAACTGCTGATAATGGTGCAACTCTCATCGTTCCTGATCTTGGTGTTTTACCTAATTAG

mRNA sequence

ATGACAATTGTAACATTAGATCCTGGCATTATTAATACTGATATGTGTGTTTCTGCTCTTGGCCATTTAGCTTCTCATTACCAATCTCCTCAAGAATGGGTTCTCAAAGCAGCTCCAATGATTCTAAATATTACAACTGCTGATAATGGTGCAACTCTCATCGTTCCTGATCTTGGTGTTTTACCTAATTAG

Coding sequence (CDS)

ATGACAATTGTAACATTAGATCCTGGCATTATTAATACTGATATGTGTGTTTCTGCTCTTGGCCATTTAGCTTCTCATTACCAATCTCCTCAAGAATGGGTTCTCAAAGCAGCTCCAATGATTCTAAATATTACAACTGCTGATAATGGTGCAACTCTCATCGTTCCTGATCTTGGTGTTTTACCTAATTAG

Protein sequence

MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIVPDLGVLPN

Homology

[Close]

BLAST of HG10006918 vs. NCBI nr
Match: XP_004149629.2 (NADPH-dependent pterin aldehyde reductase [Cucumis sativus] >KAE8648157.1 hypothetical protein Csa_018438 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19
Identity = 51/63 (80.95%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIVPDLGV 60
           +TIVTLDPGIINTD  V+ LGH AS YQSPQ W LKAAPMILNITTADNG TLIVPD GV
Sbjct: 210 LTIVTLDPGIINTDASVTILGHFASQYQSPQLWALKAAPMILNITTADNGETLIVPDPGV 269

Query: 61  LPN 64
           LP+
Sbjct: 270 LPH 272

[Close]

BLAST of HG10006918 vs. NCBI nr
Match: KAE8637287.1 (hypothetical protein CSA_004539 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19
Identity = 51/63 (80.95%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIVPDLGV 60
           +TIVTLDPGIINTD  V+ LGH AS YQSPQ W LKAAPMILNITTADNG TLIVPD GV
Sbjct: 148 LTIVTLDPGIINTDASVTILGHFASQYQSPQLWALKAAPMILNITTADNGETLIVPDPGV 207

Query: 61  LPN 64
           LP+
Sbjct: 208 LPH 210

[Close]

BLAST of HG10006918 vs. NCBI nr
Match: TYK00097.1 (NADPH-dependent pterin aldehyde reductase-like [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 4.9e-19
Identity = 49/63 (77.78%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIVPDLGV 60
           MTIVTLDPG+INTDMC   LGHLAS YQSP EW LKA PMILNIT ADNG T  VPD GV
Sbjct: 202 MTIVTLDPGVINTDMCAYYLGHLASQYQSPHEWALKATPMILNITRADNGTTFTVPDPGV 261

Query: 61  LPN 64
           LP+
Sbjct: 262 LPD 264

[Close]

BLAST of HG10006918 vs. NCBI nr
Match: XP_038892620.1 (NADPH-dependent pterin aldehyde reductase-like [Benincasa hispida])

HSP 1 Score: 104.0 bits (258), Expect = 4.9e-19
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIVPDLGV 60
           MTIV LDP IINTDMCV   GHLAS  QSPQEW LKA P+ILNITTADNGATLIVPD GV
Sbjct: 199 MTIVILDPAIINTDMCVFVQGHLASQCQSPQEWALKATPIILNITTADNGATLIVPDPGV 258

Query: 61  LPN 64
           LP+
Sbjct: 259 LPD 261

[Close]

BLAST of HG10006918 vs. NCBI nr
Match: XP_022994359.1 (NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 100.5 bits (249), Expect = 5.4e-18
Identity = 50/63 (79.37%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIVPDLGV 60
           +TIV LDPGIINTDM V+  G LAS YQSPQEW LKA  MILNITTADNGATLIVPD G 
Sbjct: 178 ITIVALDPGIINTDMAVAYFGDLASQYQSPQEWALKATSMILNITTADNGATLIVPDPGD 237

Query: 61  LPN 64
           LPN
Sbjct: 238 LPN 240

[Close]

BLAST of HG10006918 vs. ExPASy Swiss-Prot
Match: Q9SY73 (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-10
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIV 56
           M +V L+PG+INT++  S  G+ AS YQ+P  W +KAA MILN+T  DNG +L V
Sbjct: 188 MAVVALNPGVINTELLTSCFGNSASLYQAPDAWAVKAATMILNLTAGDNGGSLTV 242

[Close]

BLAST of HG10006918 vs. ExPASy TrEMBL
Match: A0A5D3BLR2 (NADPH-dependent pterin aldehyde reductase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00520 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.4e-19
Identity = 49/63 (77.78%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIVPDLGV 60
           MTIVTLDPG+INTDMC   LGHLAS YQSP EW LKA PMILNIT ADNG T  VPD GV
Sbjct: 202 MTIVTLDPGVINTDMCAYYLGHLASQYQSPHEWALKATPMILNITRADNGTTFTVPDPGV 261

Query: 61  LPN 64
           LP+
Sbjct: 262 LPD 264

[Close]

BLAST of HG10006918 vs. ExPASy TrEMBL
Match: A0A6J1K2M9 (NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490100 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.6e-18
Identity = 50/63 (79.37%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIVPDLGV 60
           +TIV LDPGIINTDM V+  G LAS YQSPQEW LKA  MILNITTADNGATLIVPD G 
Sbjct: 178 ITIVALDPGIINTDMAVAYFGDLASQYQSPQEWALKATSMILNITTADNGATLIVPDPGD 237

Query: 61  LPN 64
           LPN
Sbjct: 238 LPN 240

[Close]

BLAST of HG10006918 vs. ExPASy TrEMBL
Match: A0A6J1K4Z1 (NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490100 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.6e-18
Identity = 50/63 (79.37%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIVPDLGV 60
           +TIV LDPGIINTDM V+  G LAS YQSPQEW LKA  MILNITTADNGATLIVPD G 
Sbjct: 196 ITIVALDPGIINTDMAVAYFGDLASQYQSPQEWALKATSMILNITTADNGATLIVPDPGD 255

Query: 61  LPN 64
           LPN
Sbjct: 256 LPN 258

[Close]

BLAST of HG10006918 vs. ExPASy TrEMBL
Match: A0A6J1ETL6 (NADPH-dependent pterin aldehyde reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111436388 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-17
Identity = 49/61 (80.33%), Postives = 50/61 (81.97%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIVPDLGV 60
           MTIV LDPGIINTDM V+  G LAS YQSPQEW LKA  MILNITTADNGATLIVPD G 
Sbjct: 209 MTIVALDPGIINTDMAVAYFGDLASQYQSPQEWALKAVSMILNITTADNGATLIVPDPGD 268

Query: 61  L 62
           L
Sbjct: 269 L 269

[Close]

BLAST of HG10006918 vs. ExPASy TrEMBL
Match: A0A6J1DQ73 (NADPH-dependent pterin aldehyde reductase-like OS=Momordica charantia OX=3673 GN=LOC111023209 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.2e-16
Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIVPDLGV 60
           MTIV LDPGIINT+  VS LG +AS YQSPQEW LKAAPMILN+T+ DNGA+L V D G 
Sbjct: 196 MTIVALDPGIINTERSVSYLGSIASQYQSPQEWALKAAPMILNLTSVDNGASLHVDDPGE 255

Query: 61  LPN 64
           LPN
Sbjct: 256 LPN 258

[Close]

BLAST of HG10006918 vs. TAIR 10
Match: AT1G10310.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.0e-11
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 1   MTIVTLDPGIINTDMCVSALGHLASHYQSPQEWVLKAAPMILNITTADNGATLIV 56
           M +V L+PG+INT++  S  G+ AS YQ+P  W +KAA MILN+T  DNG +L V
Sbjct: 188 MAVVALNPGVINTELLTSCFGNSASLYQAPDAWAVKAATMILNLTAGDNGGSLTV 242

The following BLAST results are available for this feature:

BLAST of HG10006918 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149629.2	3.7e-19	80.95	NADPH-dependent pterin aldehyde reductase [Cucumis sativus] >KAE8648157.1 hypoth...	[more]
KAE8637287.1	3.7e-19	80.95	hypothetical protein CSA_004539 [Cucumis sativus]	[more]
TYK00097.1	4.9e-19	77.78	NADPH-dependent pterin aldehyde reductase-like [Cucumis melo var. makuwa]	[more]
XP_038892620.1	4.9e-19	80.95	NADPH-dependent pterin aldehyde reductase-like [Benincasa hispida]	[more]
XP_022994359.1	5.4e-18	79.37	NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucurbita maxima]	[more]

BLAST of HG10006918 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY73	1.5e-10	52.73	NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of HG10006918 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BLR2	2.4e-19	77.78	NADPH-dependent pterin aldehyde reductase-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1K2M9	2.6e-18	79.37	NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucurbita maxima OX...	[more]
A0A6J1K4Z1	2.6e-18	79.37	NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Cucurbita maxima OX...	[more]
A0A6J1ETL6	3.8e-17	80.33	NADPH-dependent pterin aldehyde reductase-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1DQ73	3.2e-16	73.02	NADPH-dependent pterin aldehyde reductase-like OS=Momordica charantia OX=3673 GN...	[more]

BLAST of HG10006918 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10310.1	1.0e-11	52.73	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45267	FAMILY NOT NAMED	coord: 1..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006918.1	HG10006918.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006760	folic acid-containing compound metabolic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor