HG10006827 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006827
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Auxin response factor
Location	Chr07: 22309278 .. 22313415 (-)
RNA-Seq Expression	HG10006827
Synteny	HG10006827

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCTCCTCCAAATGGGTTTCTGGCCAATTCTGGAGAAGGTAACTCTTATTTTCAATTTGTATGTCTGGCTGCTTCCTGATTTCCTTTCTCTCGCATTTCTATCACTTTTCAAAGTTCTAGTTACGAATCAAAAGTTTATTTTGTACACAGAAATGGTATATTTGGGATTCTTTTCTTTCTTGGATGCAATAACGTAGCATATTGATCATGCCCCAGTTTAACACCCCACTTTCTCTGAACTAAGTGAGCAAATGAAGTTCCATTTTTCTCCCATTTTCGTTGTAAAGAATGAAAATTGCAGCATGATTTTACCTTTGACCTCCTCCATTTGCTCTTATGTCGTGGCCATCTTTAATATCACATAGTAAGTAAGGGCATTCTGTTTAGCTGTACAATTGGCCATATTATTGCAAACCTTCGCAATCATTGAATTGACACTCCATGCTGAGCTCCTCTATAATGTTCTTTAAGAACACGATTGATGAGAGATTCTGAAGTTGTGTTATGCTTCGGACATGCTAAAAATCTACTGGACGGGATAAGTTCGATTTTCCATGTTGTGTGAACCAATTATTTATGGTTCTTGAAATCATAAGTGTTTTTTTTTTTACAAGAAACCAACTTTTCATCAATGAAGAACGAGAAGAATGTTAAAAACTCTGGAGAAACTTTCTTTGGAAAGGCAGCAAAGAGAACAAGGGATTTCATCTTCTTAAATGGAATATTTTAAAGGTCCCCGTGGAGGATGGAGGCCTTGTGATTTTAGATATTCAACTGAGGAACGCCTCTTGGCTCTCTCTTGGCTGAATGGAAATGGTGGGTTTACCGTGAAAAGAAGACTCATTGGCATCAGGTTATTGCCTCCAAATGGATCCACTCCATTCGACCTTAAACCAGATGCCAAAACCTTATACTCTTCCACAGGCCCTTGAAAACCCCTTGATAAATTGAAACACAGCGTGTGCTTATATAACCATAAAGGTGGGAAATGAAAATTGCACCTCTTTTTGGAAGGATATGTGGCTTGGGAACTCCAGTCTACAACATCTCTTCCCTCAACTGTACCACCTTTCACACGAGAAAGATGCCTCCATTGCTGAATTTTAGTGTTCAAATTCTGAATCGTGGGTGCTCTGTCCAAGAAGAAACCTCTTGGAGGTTGAGTTGATGATTGGGCCATTTTTCCCACTTTTTTTACAGCCTCTACTAGCTGCGGCGAGAGAAGACTCAGGGAGCTGGTCTTTAGAACTAGATGGCATTTGCACTTCAAAGTCTTTGTCAAAGCCCTATCCTCCAAGTGCTAATTCGGCTGTGTATCAACAGGTTTGGTCTGGTTGTTTCCCCAAAAATGTTAACTTTTCATTTGGGAGCTCAGCCACTCTTGCATCAACACCCTTTTTTTACAAGATGCTTTTGGCTGGGAATTTCCCAGATCAAGTAATGCTCTCTTATCTCTCTTTTGCTTGTTGGGCACCCCTTCAAAAAGGACAAAAAGATCCTTTGGCTATATCATGTTCGTGCCTTCTTTTGCAATCTTTTGTTGGAACTCAATGCTTGCATCTTCATGGATAAGAATCGCGACCGGTTATTTTATTGATTCTACTTCTCTTTTGGCTATTACTTGGAGCAAGTTGTCTCCCCTCTTTTGTGATTACATTCTTACTACTGTGCCCTCGCTAGTCTGTGAAGGTGTTTTTTGTAATTATTATCTGATAGGAACTTCTTTTTTACCCATTTCATAATATAATGAATGGTTATTGTTTTCTTCTTTTTAAAAAAATAAAATAAAAGAAATAAAGAAACATAGACACAAACTACTAAACAACACAAAACGCAGTTTCAAACAAAAACTGAAAACCAAGCTGAAACGAAATCAAATGCAACCCACTGAAACAACAATCAAAAGCAGAGAAGCCAACAACTACCAAGTCAAAGACAGAGAAGAACCCTCCTCGAAAATTGAGAAAAGGCCATACGCCACAACAATGAAATTGGTGTTGGAGTTTAATCTTCTCTGTTTCATCTATCAATTAAATTCTTTCTACGTCATTTAAGAAAATTGAGAAAAGGTCACGTGCTATAGCAACAACAAAGTGAAAAGGGGCAAAATTGTGCTGATTTTTGGAGCAAAAGAGAAGCAAAACTTCCTCAAGCCCAAAGAAAACGCAGAGCCACTTTAAAGAGAATGAATAATAACACATAAGGCAGCTACCTGAAGATTTAAGAACAAATTCCAAAAGATTACCGAAAAAACTTAAGAATTCAGAGCAGGAATTTCAAAATACTTATGCTTTGATCTCATATATCTAAAGGCCCCAGACCTGTTTGGAAGGATAAAAATGATCTTTATCTTCTAATGTAACTTCATGGAGTAATATATCTTCATGGAGAAGCGGAAACTGTGACATATCAGCCGACTTCTTCATAAGAGAATTGATTTCTTCTTGAAAAAGTTCATAGAGCCCATCCAATAGCTTCATCTGTTTTGATTTTCTCTTGCCTATTATCAAGTGGAAAATTGAACTCCAAGTCTACACTGCTAAGACTTTTGGATTCTATTATCAGCTTCCAAACCATCCTCTTAGATTTCTAACTTTTGGTTGTCCCCTTATCAATTGGAAAATTGAACTCCAACTTGTGTACTAAGCCTCTCATTGGTGTTCTCTCTAATTTATTTGCTCACTACTCCCCTACTGATATTTATTTGAATTGAGCTGCATTTATTTTCCTTATGAGGATTTTTTTTTTAGTTTTCTATAACTTCCTCTGGAAGTTTGTTTCCTTTGAACATTGCTATATCTTTTCATTATTTCAATGAGAAGTTTGTACCTTTTTCAAAACTAGCACCATCATTGACAAAAGTGGTAACAAACCGTCTTAGATAGGCCCGTTTTATGCATTTATTGCTATGTTTGTCAGGTCAAAGGAGTTATTCGGTCGACTCTTATCATATGGCAATATTTTGTATATCTCAATCTTCCAAATATCATAAGAAACAATTTAGTATTGGGAATCTGAGTGGTCCAAAATTCCTTTTTTATTTATTTAACTTGGGTTATTGATTTTTTTTCTCTCTCTGAAAGGCAATGACTTTTGTTTGGTTTGAGTACAGGTGAAGGGAAGAATATTAATTCTGAGTTATGGCATGCTTGTGCTGGGCCTCTTGTTTCATTACCTCCATTTGGAAGTCTTGTGGTTTATTTCCCTCAAGGCCACAGTGAACAAGTATGTACTTTGTCTTTCAATTTACTTGAACATCTACTCATGGATAGTGGTTGTTATGGATTTTCCTTTTCTTTTTTAAACCTTTCAGGTTGCAGCATCGATGAATAAGGAGACTGATTTCATTCCAAACTACCCTAACCTTCCTTCAAAGTTGATCTGCATGCTCCACAATGTCACATTACATGTACGACTAGGAGGGCTTTGTCCCATAGATCTAATAAAATCTCTTAAATTGAACTAATATATATTTTGAAGTAATAAATCAGCAGTTTGATTTAATCTTTTGTCAGCACTTGAATCACAATATTTGTTTTTTATGGCCTTCGTGACTACTGCCTTAAACCATTATCTTTTTATTAGAAATTATAAGGTTCATGCAACAGGCCATTGGCAGGCTGAAAAGAAATGAACGTTTTGTGGATAATTGCCAAAATATTACAAAAACGAAAAAAATTATAAAGAAGGAAAAGAAAAGAAAAGAAAAGAAAGTACCTGCTAATAAATATGTGAGCACAACATGAGATCATTGTTTTGTGTTCTGAACCAGGCTGATCCTGAAACAGATGAAGTGTATGCACAAATGACCCTTCAACCAGTGAATAAAGTAGGTTAACCAGTCAATTAGTGTTCTATACTTCATATTGGATTCATTTGTGCATTCAAATATCTTGCTTGTTAAAAGAATATTCTGACTTTCTGTTTTGCAGTATGAAAAAGAAGCTTTGTTGGCATCTGATATTGGCCTCAAACAAAGCAGGCAGCCTGCAGAATTCTTCTGCAAAACTCTAACAGCTAGTGAAACCAGCACTCACGGTGGATTTTCTGTGCCTCGTCGAGCAGCTGAGAAGATTTTCCCCCCATTAGTGCGCATCTCATCTTATTTTCTCAAAATTAGTCTCATTTATTAA

mRNA sequence

ATGAAAGCTCCTCCAAATGGGTTTCTGGCCAATTCTGGAGAAGGTCCCCGTGGAGGATGGAGGCCTTGTGATTTTAGATATTCAACTGAGGAACGCCTCTTGGCTCTCTCTTGGCTGAATGGAAATGGTGAAGGGAAGAATATTAATTCTGAGTTATGGCATGCTTGTGCTGGGCCTCTTGTTTCATTACCTCCATTTGGAAGTCTTGTGGTTTATTTCCCTCAAGGCCACAGTGAACAAGTTGCAGCATCGATGAATAAGGAGACTGATTTCATTCCAAACTACCCTAACCTTCCTTCAAAGTTGATCTGCATGCTCCACAATGTCACATTACATGCTGATCCTGAAACAGATGAAGTGTATGCACAAATGACCCTTCAACCAGTGAATAAATATGAAAAAGAAGCTTTGTTGGCATCTGATATTGGCCTCAAACAAAGCAGGCAGCCTGCAGAATTCTTCTGCAAAACTCTAACAGCTAGTGAAACCAGCACTCACGGTGGATTTTCTGTGCCTCGTCGAGCAGCTGAGAAGATTTTCCCCCCATTAGTGCGCATCTCATCTTATTTTCTCAAAATTAGTCTCATTTATTAA

Coding sequence (CDS)

ATGAAAGCTCCTCCAAATGGGTTTCTGGCCAATTCTGGAGAAGGTCCCCGTGGAGGATGGAGGCCTTGTGATTTTAGATATTCAACTGAGGAACGCCTCTTGGCTCTCTCTTGGCTGAATGGAAATGGTGAAGGGAAGAATATTAATTCTGAGTTATGGCATGCTTGTGCTGGGCCTCTTGTTTCATTACCTCCATTTGGAAGTCTTGTGGTTTATTTCCCTCAAGGCCACAGTGAACAAGTTGCAGCATCGATGAATAAGGAGACTGATTTCATTCCAAACTACCCTAACCTTCCTTCAAAGTTGATCTGCATGCTCCACAATGTCACATTACATGCTGATCCTGAAACAGATGAAGTGTATGCACAAATGACCCTTCAACCAGTGAATAAATATGAAAAAGAAGCTTTGTTGGCATCTGATATTGGCCTCAAACAAAGCAGGCAGCCTGCAGAATTCTTCTGCAAAACTCTAACAGCTAGTGAAACCAGCACTCACGGTGGATTTTCTGTGCCTCGTCGAGCAGCTGAGAAGATTTTCCCCCCATTAGTGCGCATCTCATCTTATTTTCTCAAAATTAGTCTCATTTATTAA

Protein sequence

MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPLVSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIFPPLVRISSYFLKISLIY

Homology

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BLAST of HG10006827 vs. NCBI nr
Match: XP_038890887.1 (auxin response factor 19 isoform X1 [Benincasa hispida])

HSP 1 Score: 303.1 bits (775), Expect = 1.7e-78
Identity = 152/183 (83.06%), Postives = 153/183 (83.61%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAPPNGFLANSGEG R                            KNINSELWHACAGPL
Sbjct: 1   MKAPPNGFLANSGEGER----------------------------KNINSELWHACAGPL 60

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV
Sbjct: 61  VSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIF 155

Query: 181 PPL 184
           PPL
Sbjct: 181 PPL 155

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BLAST of HG10006827 vs. NCBI nr
Match: TYK10829.1 (auxin response factor 19 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 151/183 (82.51%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAP NGFLANSGEG R                            KNINSELWHACAGPL
Sbjct: 82  MKAPSNGFLANSGEGER----------------------------KNINSELWHACAGPL 141

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV
Sbjct: 142 VSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 201

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 202 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIF 236

Query: 181 PPL 184
           PPL
Sbjct: 262 PPL 236

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BLAST of HG10006827 vs. NCBI nr
Match: NP_001292622.1 (auxin response factor 19 [Cucumis sativus] >BAD19061.1 auxin response factor 1 [Cucumis sativus])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 151/183 (82.51%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAP NGFLANSGEG R                            KNINSELWHACAGPL
Sbjct: 1   MKAPSNGFLANSGEGER----------------------------KNINSELWHACAGPL 60

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV
Sbjct: 61  VSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIF 155

Query: 181 PPL 184
           PPL
Sbjct: 181 PPL 155

[Close]

BLAST of HG10006827 vs. NCBI nr
Match: XP_008460034.1 (PREDICTED: auxin response factor 19 isoform X1 [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 151/183 (82.51%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAP NGFLANSGEG R                            KNINSELWHACAGPL
Sbjct: 1   MKAPSNGFLANSGEGER----------------------------KNINSELWHACAGPL 60

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV
Sbjct: 61  VSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIF 155

Query: 181 PPL 184
           PPL
Sbjct: 181 PPL 155

[Close]

BLAST of HG10006827 vs. NCBI nr
Match: XP_011648570.1 (auxin response factor 19 isoform X1 [Cucumis sativus] >XP_011648571.1 auxin response factor 19 isoform X1 [Cucumis sativus])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 151/183 (82.51%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAP NGFLANSGEG R                            KNINSELWHACAGPL
Sbjct: 1   MKAPSNGFLANSGEGER----------------------------KNINSELWHACAGPL 60

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV
Sbjct: 61  VSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIF 155

Query: 181 PPL 184
           PPL
Sbjct: 181 PPL 155

[Close]

BLAST of HG10006827 vs. ExPASy Swiss-Prot
Match: Q8RYC8 (Auxin response factor 19 OS=Arabidopsis thaliana OX=3702 GN=ARF19 PE=1 SV=2)

HSP 1 Score: 271.2 bits (692), Expect = 9.4e-72
Identity = 135/183 (73.77%), Postives = 145/183 (79.23%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAP NGFL +S E                            GE K INS+LWHACAGPL
Sbjct: 1   MKAPSNGFLPSSNE----------------------------GEKKPINSQLWHACAGPL 60

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASM K+TDFIPNYPNLPSKLIC+LH+VTLHAD ETDEV
Sbjct: 61  VSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLHSVTLHADTETDEV 120

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKY++EALLASD+GLK +RQP EFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 121 YAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIF 155

Query: 181 PPL 184
           PPL
Sbjct: 181 PPL 155

[Close]

BLAST of HG10006827 vs. ExPASy Swiss-Prot
Match: P93022 (Auxin response factor 7 OS=Arabidopsis thaliana OX=3702 GN=ARF7 PE=1 SV=2)

HSP 1 Score: 264.6 bits (675), Expect = 8.8e-70
Identity = 124/141 (87.94%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 43  GEGKNINSELWHACAGPLVSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKL 102
           GE +NINSELWHACAGPL+SLPP GSLVVYFPQGHSEQVAASM K+TDFIP+YPNLPSKL
Sbjct: 16  GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKL 75

Query: 103 ICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASE 162
           ICMLHNVTL+ADPETDEVYAQMTLQPVNKY+++ALLASD+GLK +RQP EFFCKTLTAS+
Sbjct: 76  ICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASD 135

Query: 163 TSTHGGFSVPRRAAEKIFPPL 184
           TSTHGGFSVPRRAAEKIFP L
Sbjct: 136 TSTHGGFSVPRRAAEKIFPAL 156

[Close]

BLAST of HG10006827 vs. ExPASy Swiss-Prot
Match: A3B9A0 (Auxin response factor 16 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF16 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.2e-66
Identity = 120/143 (83.92%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 41  GNGEGKNINSELWHACAGPLVSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPS 100
           G GE K INSELWHACAGPLVSLPP GSLVVYFPQGHSEQVAASM+KE D IP YP+LPS
Sbjct: 14  GEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPS 73

Query: 101 KLICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTA 160
           KLIC L ++TLHAD ETDEVYAQMTLQPVNKY+++A+LAS++GLKQ++QPAEFFCKTLTA
Sbjct: 74  KLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTA 133

Query: 161 SETSTHGGFSVPRRAAEKIFPPL 184
           S+TSTHGGFSVPRRAAEKIFPPL
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPL 156

[Close]

BLAST of HG10006827 vs. ExPASy Swiss-Prot
Match: A2YAA5 (Auxin response factor 16 OS=Oryza sativa subsp. indica OX=39946 GN=ARF16 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.5e-66
Identity = 119/143 (83.22%), Postives = 132/143 (92.31%), Query Frame = 0


Query: 41  GNGEGKNINSELWHACAGPLVSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPS 100
           G GE K INSELWHACAGPLVSLPP GSLVVYFPQGHSEQVAASM+KE D IP YP+LPS
Sbjct: 14  GEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPS 73

Query: 101 KLICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTA 160
           KLIC L ++TLHAD ETDEVY QMTLQPVNKY+++A+LAS++GLKQ++QPAEFFCKTLTA
Sbjct: 74  KLICKLLSLTLHADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTA 133

Query: 161 SETSTHGGFSVPRRAAEKIFPPL 184
           S+TSTHGGFSVPRRAAEKIFPPL
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPL 156

[Close]

BLAST of HG10006827 vs. ExPASy Swiss-Prot
Match: Q0D9R7 (Auxin response factor 19 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF19 PE=2 SV=2)

HSP 1 Score: 240.4 bits (612), Expect = 1.8e-62
Identity = 115/137 (83.94%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 48  INSELWHACAGPLVSLPPFGSLVVYFPQGHSEQVAASMNKETD-FIPNYPNLPSKLICML 107
           INSELWHACAGPLVSLPP GSLVVYFPQGHSEQVAASM K+ D  +P+YPNLPSKLIC+L
Sbjct: 47  INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLL 106

Query: 108 HNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTH 167
           HNVTLHADPETDEVYAQMTLQPV  Y KEAL  S++ LKQ+R   EFFCKTLTAS+TSTH
Sbjct: 107 HNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTH 166

Query: 168 GGFSVPRRAAEKIFPPL 184
           GGFSVPRRAAEKIFPPL
Sbjct: 167 GGFSVPRRAAEKIFPPL 183

[Close]

BLAST of HG10006827 vs. ExPASy TrEMBL
Match: A0A5D3CKR6 (Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001480 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.0e-78
Identity = 151/183 (82.51%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAP NGFLANSGEG R                            KNINSELWHACAGPL
Sbjct: 82  MKAPSNGFLANSGEGER----------------------------KNINSELWHACAGPL 141

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV
Sbjct: 142 VSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 201

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 202 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIF 236

Query: 181 PPL 184
           PPL
Sbjct: 262 PPL 236

[Close]

BLAST of HG10006827 vs. ExPASy TrEMBL
Match: Q6L8U3 (Auxin response factor OS=Cucumis sativus OX=3659 GN=CsARF1 PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.0e-78
Identity = 151/183 (82.51%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAP NGFLANSGEG R                            KNINSELWHACAGPL
Sbjct: 1   MKAPSNGFLANSGEGER----------------------------KNINSELWHACAGPL 60

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV
Sbjct: 61  VSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIF 155

Query: 181 PPL 184
           PPL
Sbjct: 181 PPL 155

[Close]

BLAST of HG10006827 vs. ExPASy TrEMBL
Match: A0A0A0LHN1 (Auxin response factor OS=Cucumis sativus OX=3659 GN=Csa_2G000030 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.0e-78
Identity = 151/183 (82.51%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAP NGFLANSGEG R                            KNINSELWHACAGPL
Sbjct: 1   MKAPSNGFLANSGEGER----------------------------KNINSELWHACAGPL 60

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV
Sbjct: 61  VSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIF 155

Query: 181 PPL 184
           PPL
Sbjct: 181 PPL 155

[Close]

BLAST of HG10006827 vs. ExPASy TrEMBL
Match: A0A1S3CC20 (Auxin response factor OS=Cucumis melo OX=3656 GN=LOC103498967 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.0e-78
Identity = 151/183 (82.51%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAP NGFLANSGEG R                            KNINSELWHACAGPL
Sbjct: 1   MKAPSNGFLANSGEGER----------------------------KNINSELWHACAGPL 60

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV
Sbjct: 61  VSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIF 155

Query: 181 PPL 184
           PPL
Sbjct: 181 PPL 155

[Close]

BLAST of HG10006827 vs. ExPASy TrEMBL
Match: A0A1S3CBQ4 (Auxin response factor OS=Cucumis melo OX=3656 GN=LOC103498967 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.0e-78
Identity = 151/183 (82.51%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAP NGFLANSGEG R                            KNINSELWHACAGPL
Sbjct: 1   MKAPSNGFLANSGEGER----------------------------KNINSELWHACAGPL 60

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV
Sbjct: 61  VSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIF 155

Query: 181 PPL 184
           PPL
Sbjct: 181 PPL 155

[Close]

BLAST of HG10006827 vs. TAIR 10
Match: AT1G19220.1 (auxin response factor 19 )

HSP 1 Score: 271.2 bits (692), Expect = 6.7e-73
Identity = 135/183 (73.77%), Postives = 145/183 (79.23%), Query Frame = 0


Query: 1   MKAPPNGFLANSGEGPRGGWRPCDFRYSTEERLLALSWLNGNGEGKNINSELWHACAGPL 60
           MKAP NGFL +S E                            GE K INS+LWHACAGPL
Sbjct: 1   MKAPSNGFLPSSNE----------------------------GEKKPINSQLWHACAGPL 60

Query: 61  VSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICMLHNVTLHADPETDEV 120
           VSLPP GSLVVYFPQGHSEQVAASM K+TDFIPNYPNLPSKLIC+LH+VTLHAD ETDEV
Sbjct: 61  VSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLHSVTLHADTETDEV 120

Query: 121 YAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASETSTHGGFSVPRRAAEKIF 180
           YAQMTLQPVNKY++EALLASD+GLK +RQP EFFCKTLTAS+TSTHGGFSVPRRAAEKIF
Sbjct: 121 YAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIF 155

Query: 181 PPL 184
           PPL
Sbjct: 181 PPL 155

[Close]

BLAST of HG10006827 vs. TAIR 10
Match: AT5G20730.1 (Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related )

HSP 1 Score: 264.6 bits (675), Expect = 6.3e-71
Identity = 124/141 (87.94%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 43  GEGKNINSELWHACAGPLVSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKL 102
           GE +NINSELWHACAGPL+SLPP GSLVVYFPQGHSEQVAASM K+TDFIP+YPNLPSKL
Sbjct: 16  GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKL 75

Query: 103 ICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASE 162
           ICMLHNVTL+ADPETDEVYAQMTLQPVNKY+++ALLASD+GLK +RQP EFFCKTLTAS+
Sbjct: 76  ICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASD 135

Query: 163 TSTHGGFSVPRRAAEKIFPPL 184
           TSTHGGFSVPRRAAEKIFP L
Sbjct: 136 TSTHGGFSVPRRAAEKIFPAL 156

[Close]

BLAST of HG10006827 vs. TAIR 10
Match: AT5G20730.2 (Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related )

HSP 1 Score: 264.6 bits (675), Expect = 6.3e-71
Identity = 124/141 (87.94%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 43  GEGKNINSELWHACAGPLVSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKL 102
           GE +NINSELWHACAGPL+SLPP GSLVVYFPQGHSEQVAASM K+TDFIP+YPNLPSKL
Sbjct: 16  GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKL 75

Query: 103 ICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASE 162
           ICMLHNVTL+ADPETDEVYAQMTLQPVNKY+++ALLASD+GLK +RQP EFFCKTLTAS+
Sbjct: 76  ICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASD 135

Query: 163 TSTHGGFSVPRRAAEKIFPPL 184
           TSTHGGFSVPRRAAEKIFP L
Sbjct: 136 TSTHGGFSVPRRAAEKIFPAL 156

[Close]

BLAST of HG10006827 vs. TAIR 10
Match: AT5G20730.3 (Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related )

HSP 1 Score: 264.6 bits (675), Expect = 6.3e-71
Identity = 124/141 (87.94%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 43  GEGKNINSELWHACAGPLVSLPPFGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKL 102
           GE +NINSELWHACAGPL+SLPP GSLVVYFPQGHSEQVAASM K+TDFIP+YPNLPSKL
Sbjct: 16  GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKL 75

Query: 103 ICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASE 162
           ICMLHNVTL+ADPETDEVYAQMTLQPVNKY+++ALLASD+GLK +RQP EFFCKTLTAS+
Sbjct: 76  ICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASD 135

Query: 163 TSTHGGFSVPRRAAEKIFPPL 184
           TSTHGGFSVPRRAAEKIFP L
Sbjct: 136 TSTHGGFSVPRRAAEKIFPAL 156

[Close]

BLAST of HG10006827 vs. TAIR 10
Match: AT1G30330.1 (auxin response factor 6 )

HSP 1 Score: 218.0 bits (554), Expect = 6.7e-57
Identity = 107/143 (74.83%), Postives = 121/143 (84.62%), Query Frame = 0


Query: 43  GEGKNINSELWHACAGPLVSLPPFGSLVVYFPQGHSEQVAASMNKETD-FIPNYPNLPSK 102
           GE + +NSELWHACAGPLVSLPP GS VVYFPQGHSEQVAAS NKE D  IPNYP+L  +
Sbjct: 15  GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQ 74

Query: 103 LICMLHNVTLHADPETDEVYAQMTLQPVNKYE-KEALLASDIGLKQSRQPAEFFCKTLTA 162
           LIC LHNVT+HAD ETDEVYAQMTLQP+N  E K+  L +++G+  SRQP  +FCKTLTA
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGV-PSRQPTNYFCKTLTA 134

Query: 163 SETSTHGGFSVPRRAAEKIFPPL 184
           S+TSTHGGFSVPRRAAEK+FPPL
Sbjct: 135 SDTSTHGGFSVPRRAAEKVFPPL 156

The following BLAST results are available for this feature:

BLAST of HG10006827 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890887.1	1.7e-78	83.06	auxin response factor 19 isoform X1 [Benincasa hispida]	[more]
TYK10829.1	1.4e-77	82.51	auxin response factor 19 isoform X2 [Cucumis melo var. makuwa]	[more]
NP_001292622.1	1.4e-77	82.51	auxin response factor 19 [Cucumis sativus] >BAD19061.1 auxin response factor 1 [...	[more]
XP_008460034.1	1.4e-77	82.51	PREDICTED: auxin response factor 19 isoform X1 [Cucumis melo]	[more]
XP_011648570.1	1.4e-77	82.51	auxin response factor 19 isoform X1 [Cucumis sativus] >XP_011648571.1 auxin resp...	[more]

BLAST of HG10006827 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RYC8	9.4e-72	73.77	Auxin response factor 19 OS=Arabidopsis thaliana OX=3702 GN=ARF19 PE=1 SV=2	[more]
P93022	8.8e-70	87.94	Auxin response factor 7 OS=Arabidopsis thaliana OX=3702 GN=ARF7 PE=1 SV=2	[more]
A3B9A0	1.2e-66	83.92	Auxin response factor 16 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF16 PE=2 ...	[more]
A2YAA5	3.5e-66	83.22	Auxin response factor 16 OS=Oryza sativa subsp. indica OX=39946 GN=ARF16 PE=2 SV...	[more]
Q0D9R7	1.8e-62	83.94	Auxin response factor 19 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF19 PE=2 ...	[more]

BLAST of HG10006827 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CKR6	7.0e-78	82.51	Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold33...	[more]
Q6L8U3	7.0e-78	82.51	Auxin response factor OS=Cucumis sativus OX=3659 GN=CsARF1 PE=2 SV=1	[more]
A0A0A0LHN1	7.0e-78	82.51	Auxin response factor OS=Cucumis sativus OX=3659 GN=Csa_2G000030 PE=3 SV=1	[more]
A0A1S3CC20	7.0e-78	82.51	Auxin response factor OS=Cucumis melo OX=3656 GN=LOC103498967 PE=3 SV=1	[more]
A0A1S3CBQ4	7.0e-78	82.51	Auxin response factor OS=Cucumis melo OX=3656 GN=LOC103498967 PE=3 SV=1	[more]

BLAST of HG10006827 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19220.1	6.7e-73	73.77	auxin response factor 19	[more]
AT5G20730.1	6.3e-71	87.94	Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-relat...	[more]
AT5G20730.2	6.3e-71	87.94	Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-relat...	[more]
AT5G20730.3	6.3e-71	87.94	Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-relat...	[more]
AT1G30330.1	6.7e-57	74.83	auxin response factor 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 152..191 e-value: 1.8E-9 score: 39.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 144..188
IPR044835	Auxin response factor	PANTHER	PTHR31384	AUXIN RESPONSE FACTOR 4-RELATED	coord: 41..183
None	No IPR available	PANTHER	PTHR31384:SF21	AUXIN RESPONSE FACTOR 19	coord: 41..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006827.1	HG10006827.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009725	response to hormone
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding