HG10006640 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006640
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Cucumber peeling cupredoxin-like
Location	Chr07: 20627956 .. 20629945 (-)
RNA-Seq Expression	HG10006640
Synteny	HG10006640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGAAATCGATGTTCGCGGCGGTGTTTCTGCTACTTGCGGTGGTTGCTCCTCCGCGAAGGGCGTCCGCCGCCACTCACAACGTCGGCGATTCGCTTGGCTGGACCATCCCTCCCAATCCTTCTACTTATTCCAATTGGGCCTCCACTAAAACGTTTCTCGTCGGCGACATTCTCTGTGAGTAGTCTTTTTTCTTCTTCTTCTTCTTCCTATAATATTATTTCTCCATTTTTTAGAACGCTGAGATTTTATTGTAGATTATTTCAAATAAATCATAAATTTAATCCATATAATTTGAATAAAGTTAGAATTTAGGCTGTATAATTAGTCGACTATTTAAGGAATATTTTCTGTTTTAATACCATTTAGGCAGTGCTAGAAGAGTATTTGATATATCTAGTTGGTAATTAAAAACTCGCATATAAATATTTTAATTACCATTTTATAGTTTAATAGTTTGATTCTCGTTGTAATTATTTTTTTGATTTTATTGGCTTAAACTATAATTACTTTCAAATTTAATTGTTAATGATTATTGAGATACTTTTTTAAAAAAATGAATGAGAAATGATAAACATAATTCATGTTCAATTATTTATTATATTTAAATTTGATTCTTCTTACTCCACTAATTGTGTGGGAAGGAGCAGTCAACTAACCTTCAGCTAGAATCATATTGGCTTATTAGTTAACGATGAATTAACGAGGAATCTTAATTCAAACCTGCATTCATCTCTGCATTATAATCATTAAAAAAAATTATTGTAAAAAAAAAGTAAGGAGAGTTAAAAAATTGGGTTAAACATAGAAGGTTTAAATCTTATTTTGGTTCCTAAATTTTTAAAAAATGTTCGTATTAGTCCTTAAACTTTGAATATTATTTTATTTTAGTTCAAACTTTTAAAATTGTACTTATTTTGATCTCTACTATATTAAAATTTTGTTAACCCTTTAACAAATTGACGAGATGATTTGTATTTTTTGATGACTAAACTACCAAATAAGTTAATTACGCTAAAAAATCTAGAATTTCAATTTTGAATAAGGTGACAAAGCGGATGAATTTAAAATACATTTTTAGTTCACAATTTTGGTTGTTCAATATTTTGGCGTATTGGTTGTTGACATTTTACTTTACTCTCATCTTGCTCAATACATCTAGAGCTCATGCATGCAAAAATACAAGCTCTCTTACATTTCTGTTGGATAGTTAACATAATTTTAATAGTAAGAACTAATAAATACTTTTTAAAAGTTTAGGGACTAAAATAAATATTTTAAAAATTTAAGAAATAAAATAAAGCAAGATTTAAAATTTAGGGACTAAAATAGGATTTAAACAAATATAGAGACAATTCAAAATCGTTACTAATAACTTTTATATTAGAAAGAAACCTTATCTTCTAATTATAAATTTTAAAAATTAATTAATTAATCGCCAACTACTTATTAAGAATTAATTCTTTTCGCCAATATTTATTAATTTCAGATTTTTAATTGCAACTCTTTTTTAAAAAAAATTGTGCAGTTTTCAATTTCACCACCGGACAGCACGACGTGACGGAAGTGACGAAGGCCGCATTAGACTCCTGCAGCAGCAGCAACCCCATCTCCGCCGTGAGAAGCGGCCCGGCGAGTATTACACTCTCGGCAGCCGGCACCCGCCACTTCATCTGCTCGTTTTCCGGCCACTGCGGCTTCGGCCAGAAGCTCTCCGTCAACGTCCGATCACAATCTTCTTCGCCGCCGACCGCCTCCCCTTCACCCTCACCCAAATCCAGCACTCCCGTTTCGCCGACGCCGTCGCCACACACCGGTCGGCCGCCGAAGGCCTCTCCTCCGACAGCCACTCCTCCGCCGTCAAACATCGCTCCTTCTACTCAGTCGCCGACGACCGCCCCGCCTCCGCCCAACTCCGCCAACTCCCTCGGCGGTTTCGGCCTCTTTTTCTCCGCCGGTTTGGCGATTATGGTTGCTCTGATTTGA

mRNA sequence

ATGGCGGCGAAATCGATGTTCGCGGCGGTGTTTCTGCTACTTGCGGTGGTTGCTCCTCCGCGAAGGGCGTCCGCCGCCACTCACAACGTCGGCGATTCGCTTGGCTGGACCATCCCTCCCAATCCTTCTACTTATTCCAATTGGGCCTCCACTAAAACGTTTCTCGTCGGCGACATTCTCTTTTTCAATTTCACCACCGGACAGCACGACGTGACGGAAGTGACGAAGGCCGCATTAGACTCCTGCAGCAGCAGCAACCCCATCTCCGCCGTGAGAAGCGGCCCGGCGAGTATTACACTCTCGGCAGCCGGCACCCGCCACTTCATCTGCTCGTTTTCCGGCCACTGCGGCTTCGGCCAGAAGCTCTCCGTCAACGTCCGATCACAATCTTCTTCGCCGCCGACCGCCTCCCCTTCACCCTCACCCAAATCCAGCACTCCCGTTTCGCCGACGCCGTCGCCACACACCGGTCGGCCGCCGAAGGCCTCTCCTCCGACAGCCACTCCTCCGCCGTCAAACATCGCTCCTTCTACTCAGTCGCCGACGACCGCCCCGCCTCCGCCCAACTCCGCCAACTCCCTCGGCGGTTTCGGCCTCTTTTTCTCCGCCGGTTTGGCGATTATGGTTGCTCTGATTTGA

Coding sequence (CDS)

ATGGCGGCGAAATCGATGTTCGCGGCGGTGTTTCTGCTACTTGCGGTGGTTGCTCCTCCGCGAAGGGCGTCCGCCGCCACTCACAACGTCGGCGATTCGCTTGGCTGGACCATCCCTCCCAATCCTTCTACTTATTCCAATTGGGCCTCCACTAAAACGTTTCTCGTCGGCGACATTCTCTTTTTCAATTTCACCACCGGACAGCACGACGTGACGGAAGTGACGAAGGCCGCATTAGACTCCTGCAGCAGCAGCAACCCCATCTCCGCCGTGAGAAGCGGCCCGGCGAGTATTACACTCTCGGCAGCCGGCACCCGCCACTTCATCTGCTCGTTTTCCGGCCACTGCGGCTTCGGCCAGAAGCTCTCCGTCAACGTCCGATCACAATCTTCTTCGCCGCCGACCGCCTCCCCTTCACCCTCACCCAAATCCAGCACTCCCGTTTCGCCGACGCCGTCGCCACACACCGGTCGGCCGCCGAAGGCCTCTCCTCCGACAGCCACTCCTCCGCCGTCAAACATCGCTCCTTCTACTCAGTCGCCGACGACCGCCCCGCCTCCGCCCAACTCCGCCAACTCCCTCGGCGGTTTCGGCCTCTTTTTCTCCGCCGGTTTGGCGATTATGGTTGCTCTGATTTGA

Protein sequence

MAAKSMFAAVFLLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDILFFNFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQKLSVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPPSNIAPSTQSPTTAPPPPNSANSLGGFGLFFSAGLAIMVALI

Homology

[Close]

BLAST of HG10006640 vs. NCBI nr
Match: XP_004139303.1 (cucumber peeling cupredoxin-like [Cucumis sativus] >KGN60692.1 hypothetical protein Csa_019447 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 3.2e-83
Identity = 173/220 (78.64%), Postives = 187/220 (85.00%), Query Frame = 0


Query: 1   MAAKSMFAAVFLLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDIL 60
           MA  SMFAA+ LLL V+ PP+RA+AATHNVGDSLGWTIPP  +TYS+WASTKTFLVGD L
Sbjct: 1   MAVNSMFAALLLLLVVLPPPQRAAAATHNVGDSLGWTIPPTSTTYSDWASTKTFLVGDNL 60

Query: 61  FFNFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQ 120
           FFNFTTGQHDVTEVTKA LDSCS +NPIS +R+GPASI LS AGTRHFICS   HC FGQ
Sbjct: 61  FFNFTTGQHDVTEVTKAELDSCSGTNPISVMRNGPASIPLSTAGTRHFICSIPTHCSFGQ 120

Query: 121 KLSVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPP--------S 180
           KL+V VRSQSSSPPT +PSPSPKSSTPVSPTPSPHT RPPK SPPT TPPP        S
Sbjct: 121 KLTVTVRSQSSSPPTTAPSPSPKSSTPVSPTPSPHTARPPKTSPPTTTPPPETAPTPTSS 180

Query: 181 NIAPSTQSPTTAPPPPNSANSLGGFGLFFSAGLAIMVALI 213
           NIAPST +PT APPPPNSANS+GGFGLFFSAGLAI+V LI
Sbjct: 181 NIAPSTPTPTAAPPPPNSANSVGGFGLFFSAGLAIVVGLI 220

[Close]

BLAST of HG10006640 vs. NCBI nr
Match: KAA0063541.1 (cucumber peeling cupredoxin-like [Cucumis melo var. makuwa] >TYJ97868.1 cucumber peeling cupredoxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 318.2 bits (814), Expect = 5.5e-83
Identity = 174/223 (78.03%), Postives = 193/223 (86.55%), Query Frame = 0


Query: 1   MAAKSMFAAVF-LLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDI 60
           MA KSMFAAV  ++LAVV+PP+RA+AATHNVGDSLGWTIPP+P+TYS+WASTKTFLVGD 
Sbjct: 1   MAVKSMFAAVLVVVLAVVSPPQRAAAATHNVGDSLGWTIPPSPTTYSDWASTKTFLVGDT 60

Query: 61  LFFNFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFG 120
           LFFNFTTGQHDVTEVTKA LDSCS +NPISA+R+GPASI LSAAGTRHFICS   HC FG
Sbjct: 61  LFFNFTTGQHDVTEVTKAGLDSCSGTNPISAMRTGPASIKLSAAGTRHFICSIPTHCSFG 120

Query: 121 QKLSVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPP-------- 180
           Q+L+V VRSQSSSPPTA+PSPSPKSS PVSPTPSP T RPPKASPPT TPPP        
Sbjct: 121 QQLTVTVRSQSSSPPTAAPSPSPKSSAPVSPTPSPRTARPPKASPPTTTPPPETAETPTP 180

Query: 181 --SNIAPSTQSPTTAPPPPNSANSLGGFGLFFSAGLAIMVALI 213
             +NIAPST +PT APPPPNS NS+GGFGLFF+AGLAI+V LI
Sbjct: 181 TSNNIAPSTPTPTAAPPPPNSGNSVGGFGLFFTAGLAIVVGLI 223

[Close]

BLAST of HG10006640 vs. NCBI nr
Match: XP_038890974.1 (cucumber peeling cupredoxin-like [Benincasa hispida])

HSP 1 Score: 315.1 bits (806), Expect = 4.7e-82
Identity = 177/214 (82.71%), Postives = 188/214 (87.85%), Query Frame = 0


Query: 1   MAAKSMFAAVFLLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDIL 60
           MAAKSMFAAVFLLL VVAP RR +AATHNVGDSLGWTIP +PSTYS+WASTKTFLVGDIL
Sbjct: 1   MAAKSMFAAVFLLLVVVAPLRRTAAATHNVGDSLGWTIPSSPSTYSDWASTKTFLVGDIL 60

Query: 61  FFNFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQ 120
           FFNFTTGQHDVTEVTKAALDSCSS+NPISAVRSGPA+ITLSAAGTRHFICSF  HC  GQ
Sbjct: 61  FFNFTTGQHDVTEVTKAALDSCSSTNPISAVRSGPANITLSAAGTRHFICSFPTHCSLGQ 120

Query: 121 KLSVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPPSN--IAPST 180
           KL+V VRSQSSSPPT +PSPSPKSS+PVSPTPSPH+ RPPKASPPTAT PP      PS 
Sbjct: 121 KLTVTVRSQSSSPPTTAPSPSPKSSSPVSPTPSPHSSRPPKASPPTATSPPETAPTPPSN 180

Query: 181 QSPTTAPPPPNSANSLGGFGLFFSAGLAIMVALI 213
            +PT  PPPPNSANS  GFGL  SAGLAI+VALI
Sbjct: 181 IAPT--PPPPNSANSFAGFGLSLSAGLAIVVALI 212

[Close]

BLAST of HG10006640 vs. NCBI nr
Match: XP_008456869.1 (PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo])

HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81
Identity = 171/223 (76.68%), Postives = 191/223 (85.65%), Query Frame = 0


Query: 1   MAAKSMFAAVF-LLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDI 60
           MA KSMFAAV  ++LA+V+PP+RA+AATHNVGDSLGWTIPP+P+TYS+WASTKTFLVGD 
Sbjct: 1   MAVKSMFAAVLVVVLAMVSPPQRAAAATHNVGDSLGWTIPPSPTTYSDWASTKTFLVGDT 60

Query: 61  LFFNFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFG 120
           LFFNFTTG HDVTEVTKA LDSCS +NPISA+R+GPASI LSAAGTRHFICS   HC FG
Sbjct: 61  LFFNFTTGLHDVTEVTKAGLDSCSGTNPISAMRTGPASIKLSAAGTRHFICSIPTHCSFG 120

Query: 121 QKLSVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPP-------- 180
           Q+L+V VRSQSSSPPT +PSPSPKSS PVSPTPSP T RPPKASPPT TPPP        
Sbjct: 121 QQLTVTVRSQSSSPPTTAPSPSPKSSAPVSPTPSPRTARPPKASPPTTTPPPETAETPTP 180

Query: 181 --SNIAPSTQSPTTAPPPPNSANSLGGFGLFFSAGLAIMVALI 213
             +NIAPST +PT APPPPNS NS+GGFGLFF+AGLAI+V LI
Sbjct: 181 TSNNIAPSTPTPTAAPPPPNSGNSVGGFGLFFTAGLAIVVGLI 223

[Close]

BLAST of HG10006640 vs. NCBI nr
Match: XP_022965937.1 (cucumber peeling cupredoxin-like [Cucurbita maxima])

HSP 1 Score: 290.4 bits (742), Expect = 1.2e-74
Identity = 157/212 (74.06%), Postives = 177/212 (83.49%), Query Frame = 0


Query: 1   MAAKSMFAAVFLLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDIL 60
           MAAKS+ AAV LLLAVVAPPR ASAATH VGDS+GW IPP P++YS+WA+TKTFL GDIL
Sbjct: 1   MAAKSILAAVVLLLAVVAPPRMASAATHTVGDSIGWNIPPEPTSYSDWAATKTFLAGDIL 60

Query: 61  FFNFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQ 120
            FNFTTGQHDVTEVTKA+ DSC+++NPIS+ +SGPA ITL+ AG+RHFICSF+GHCG GQ
Sbjct: 61  LFNFTTGQHDVTEVTKASFDSCATTNPISSTKSGPARITLTDAGSRHFICSFAGHCGTGQ 120

Query: 121 KLSVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPPSNIAPSTQS 180
           KLSV VRSQSS PPT +P PS K   P  P+P PH+G PPKASPPTATPPPS   PS Q+
Sbjct: 121 KLSVTVRSQSSPPPTTAPPPSNK---PKKPSPPPHSGHPPKASPPTATPPPSENGPSAQT 180

Query: 181 PTTAPPPPNSANSLGGFGLFFSAGLAIMVALI 213
           P  APPP NSA SLGGFG+FFSAGL I VALI
Sbjct: 181 PPAAPPPRNSATSLGGFGVFFSAGLTIAVALI 209

[Close]

BLAST of HG10006640 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 9.0e-20
Identity = 74/187 (39.57%), Postives = 103/187 (55.08%), Query Frame = 0


Query: 25  AATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDILFFNFTTGQHDVTEVTKAALDSCSS 84
           A  ++VGD   WT P +P  Y+ WA+ KTF VGD L F+F  G+HDV  V++AA ++C  
Sbjct: 22  AEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEK 81

Query: 85  SNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQKLSVNVRSQSSSPPTASPSPSPKS 144
             PIS +   P  I L+  G ++FIC+   HC FGQKLS+ V +       A+   +P +
Sbjct: 82  EKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAG-----ATGGATPGA 141

Query: 145 STPVSPTPSPHTGRPPKASPPTATPPPSNIAPSTQSPTTAPPPPNSANSLGGFGLFFSAG 204
               +P  +P TG     +PPTA        PS  S TT  P  N+A+SLGG   F  A 
Sbjct: 142 GATPAPGSTPSTG---GTTPPTA---GGTTTPSGSSGTTT-PAGNAASSLGG-ATFLVAF 195

Query: 205 LAIMVAL 212
           ++ +VAL
Sbjct: 202 VSAVVAL 195

[Close]

BLAST of HG10006640 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.5e-19
Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 28  HNVGDSLGWTIPPNPSTYSNWASTKTFLVGDILFFNFTTGQHDVTEVTKAALDSCSSSNP 87
           ++VG  + W  P +P  Y  WA+ KTF VGD L F+F  G HDV  VTK A D+C   NP
Sbjct: 3   YDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENP 62

Query: 88  ISAVRSGPASITLSAAGTRHFICSFSGHCGFGQKLSVNVRSQSSSPPTASP 139
           IS + + P  I L+  G +++IC+   HC  GQKLS+NV     +   A+P
Sbjct: 63  ISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGAGGGATP 113

[Close]

BLAST of HG10006640 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 93.2 bits (230), Expect = 3.8e-18
Identity = 58/135 (42.96%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 25  AATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDILFFNFTTGQHDVTEV-TKAALDSCS 84
           +  H VGD+ GW++P +P+ YS WA+ KTF VGD L FNF    H+V E+ TK + D+C+
Sbjct: 2   STVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACN 61

Query: 85  SSNPISAV-RSGPASITLSAAGTRHFICSFSGHCGFGQKLSVNV---RSQSSSPPTASPS 144
             N  + V R+ P    L   G  +F+C+   HC  GQKLS+NV    +  S PP +S  
Sbjct: 62  FVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMPPPSSSP 121

Query: 145 PSPKSSTPVSPTPSP 155
           PS     PV P PSP
Sbjct: 122 PSSVMPPPVMPPPSP 136

[Close]

BLAST of HG10006640 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.5e-17
Identity = 48/108 (44.44%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 25  AATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDILFFNFTTGQHDVTEVTKAALDSCSS 84
           A  H VGDS GWT    P  Y+ WAS+  F VGD L FN+    H+V +V +    SC+S
Sbjct: 1   ATVHKVGDSTGWTTLV-PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNS 60

Query: 85  SNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQKLSVNVRSQSSS 133
           S+P ++  SG  SI L   GT +F+C   GHC  GQK+ + V   SSS
Sbjct: 61  SSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSS 107

[Close]

BLAST of HG10006640 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.3e-17
Identity = 70/173 (40.46%), Postives = 93/173 (53.76%), Query Frame = 0


Query: 13  LLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDILFFNFTTGQHDVT 72
           LLA++     + A  + VGD+ GW I      YS WAS KTF VGD L FN+  G H V 
Sbjct: 12  LLAIINMALPSLATVYTVGDTSGWVI---GGDYSTWASDKTFAVGDSLVFNYGAGAHTVD 71

Query: 73  EVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQKLSVNVRSQSSS 132
           EV ++   SC+S N IS   +G  +I L  AG  +FIC   GH   G KLS+ V++ S S
Sbjct: 72  EVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSGS 131

Query: 133 PPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPPSNIAPSTQ-SPTTA 185
             +A+PS +P SS   SP+    +   P A+  T TP   N + +T  SP  A
Sbjct: 132 --SAAPSATPSSSGKGSPS----SDDTPAATTTTTTPTKQNESSATSLSPIVA 175

[Close]

BLAST of HG10006640 vs. ExPASy TrEMBL
Match: A0A0A0LIZ5 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G006870 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83
Identity = 173/220 (78.64%), Postives = 187/220 (85.00%), Query Frame = 0


Query: 1   MAAKSMFAAVFLLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDIL 60
           MA  SMFAA+ LLL V+ PP+RA+AATHNVGDSLGWTIPP  +TYS+WASTKTFLVGD L
Sbjct: 1   MAVNSMFAALLLLLVVLPPPQRAAAATHNVGDSLGWTIPPTSTTYSDWASTKTFLVGDNL 60

Query: 61  FFNFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQ 120
           FFNFTTGQHDVTEVTKA LDSCS +NPIS +R+GPASI LS AGTRHFICS   HC FGQ
Sbjct: 61  FFNFTTGQHDVTEVTKAELDSCSGTNPISVMRNGPASIPLSTAGTRHFICSIPTHCSFGQ 120

Query: 121 KLSVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPP--------S 180
           KL+V VRSQSSSPPT +PSPSPKSSTPVSPTPSPHT RPPK SPPT TPPP        S
Sbjct: 121 KLTVTVRSQSSSPPTTAPSPSPKSSTPVSPTPSPHTARPPKTSPPTTTPPPETAPTPTSS 180

Query: 181 NIAPSTQSPTTAPPPPNSANSLGGFGLFFSAGLAIMVALI 213
           NIAPST +PT APPPPNSANS+GGFGLFFSAGLAI+V LI
Sbjct: 181 NIAPSTPTPTAAPPPPNSANSVGGFGLFFSAGLAIVVGLI 220

[Close]

BLAST of HG10006640 vs. ExPASy TrEMBL
Match: A0A5A7VCV3 (Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00810 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.7e-83
Identity = 174/223 (78.03%), Postives = 193/223 (86.55%), Query Frame = 0


Query: 1   MAAKSMFAAVF-LLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDI 60
           MA KSMFAAV  ++LAVV+PP+RA+AATHNVGDSLGWTIPP+P+TYS+WASTKTFLVGD 
Sbjct: 1   MAVKSMFAAVLVVVLAVVSPPQRAAAATHNVGDSLGWTIPPSPTTYSDWASTKTFLVGDT 60

Query: 61  LFFNFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFG 120
           LFFNFTTGQHDVTEVTKA LDSCS +NPISA+R+GPASI LSAAGTRHFICS   HC FG
Sbjct: 61  LFFNFTTGQHDVTEVTKAGLDSCSGTNPISAMRTGPASIKLSAAGTRHFICSIPTHCSFG 120

Query: 121 QKLSVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPP-------- 180
           Q+L+V VRSQSSSPPTA+PSPSPKSS PVSPTPSP T RPPKASPPT TPPP        
Sbjct: 121 QQLTVTVRSQSSSPPTAAPSPSPKSSAPVSPTPSPRTARPPKASPPTTTPPPETAETPTP 180

Query: 181 --SNIAPSTQSPTTAPPPPNSANSLGGFGLFFSAGLAIMVALI 213
             +NIAPST +PT APPPPNS NS+GGFGLFF+AGLAI+V LI
Sbjct: 181 TSNNIAPSTPTPTAAPPPPNSGNSVGGFGLFFTAGLAIVVGLI 223

[Close]

BLAST of HG10006640 vs. ExPASy TrEMBL
Match: A0A1S3C3T3 (cucumber peeling cupredoxin-like OS=Cucumis melo OX=3656 GN=LOC103496681 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 171/223 (76.68%), Postives = 191/223 (85.65%), Query Frame = 0


Query: 1   MAAKSMFAAVF-LLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDI 60
           MA KSMFAAV  ++LA+V+PP+RA+AATHNVGDSLGWTIPP+P+TYS+WASTKTFLVGD 
Sbjct: 1   MAVKSMFAAVLVVVLAMVSPPQRAAAATHNVGDSLGWTIPPSPTTYSDWASTKTFLVGDT 60

Query: 61  LFFNFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFG 120
           LFFNFTTG HDVTEVTKA LDSCS +NPISA+R+GPASI LSAAGTRHFICS   HC FG
Sbjct: 61  LFFNFTTGLHDVTEVTKAGLDSCSGTNPISAMRTGPASIKLSAAGTRHFICSIPTHCSFG 120

Query: 121 QKLSVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPP-------- 180
           Q+L+V VRSQSSSPPT +PSPSPKSS PVSPTPSP T RPPKASPPT TPPP        
Sbjct: 121 QQLTVTVRSQSSSPPTTAPSPSPKSSAPVSPTPSPRTARPPKASPPTTTPPPETAETPTP 180

Query: 181 --SNIAPSTQSPTTAPPPPNSANSLGGFGLFFSAGLAIMVALI 213
             +NIAPST +PT APPPPNS NS+GGFGLFF+AGLAI+V LI
Sbjct: 181 TSNNIAPSTPTPTAAPPPPNSGNSVGGFGLFFTAGLAIVVGLI 223

[Close]

BLAST of HG10006640 vs. ExPASy TrEMBL
Match: A0A6J1HLN3 (cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111465665 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 6.0e-75
Identity = 157/212 (74.06%), Postives = 177/212 (83.49%), Query Frame = 0


Query: 1   MAAKSMFAAVFLLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDIL 60
           MAAKS+ AAV LLLAVVAPPR ASAATH VGDS+GW IPP P++YS+WA+TKTFL GDIL
Sbjct: 1   MAAKSILAAVVLLLAVVAPPRMASAATHTVGDSIGWNIPPEPTSYSDWAATKTFLAGDIL 60

Query: 61  FFNFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQ 120
            FNFTTGQHDVTEVTKA+ DSC+++NPIS+ +SGPA ITL+ AG+RHFICSF+GHCG GQ
Sbjct: 61  LFNFTTGQHDVTEVTKASFDSCATTNPISSTKSGPARITLTDAGSRHFICSFAGHCGTGQ 120

Query: 121 KLSVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPPSNIAPSTQS 180
           KLSV VRSQSS PPT +P PS K   P  P+P PH+G PPKASPPTATPPPS   PS Q+
Sbjct: 121 KLSVTVRSQSSPPPTTAPPPSNK---PKKPSPPPHSGHPPKASPPTATPPPSENGPSAQT 180

Query: 181 PTTAPPPPNSANSLGGFGLFFSAGLAIMVALI 213
           P  APPP NSA SLGGFG+FFSAGL I VALI
Sbjct: 181 PPAAPPPRNSATSLGGFGVFFSAGLTIAVALI 209

[Close]

BLAST of HG10006640 vs. ExPASy TrEMBL
Match: A0A6J1FCM6 (cucumber peeling cupredoxin-like OS=Cucurbita moschata OX=3662 GN=LOC111444182 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.8e-70
Identity = 153/212 (72.17%), Postives = 173/212 (81.60%), Query Frame = 0


Query: 1   MAAKSMFAAVFLLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDIL 60
           MAAKS+ AAVFLLLAVVAPPR ASAATH VGDSLGW IP +P++YS+WA+TKTFL GDIL
Sbjct: 1   MAAKSILAAVFLLLAVVAPPRMASAATHIVGDSLGWNIPSDPTSYSDWAATKTFLAGDIL 60

Query: 61  FFNFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQ 120
            FNFTTGQHDVTEVTKA+ DSC+++NPIS+ +SGPA ITL+ AG+RHFICSF+GHCG GQ
Sbjct: 61  LFNFTTGQHDVTEVTKASFDSCATANPISSTKSGPARITLTDAGSRHFICSFAGHCGTGQ 120

Query: 121 KLSVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPPSNIAPSTQS 180
           KLSV VRSQSS PPT +P PS K   P  P+P      PPKASPPTATPPPS   PS Q+
Sbjct: 121 KLSVTVRSQSSPPPTTAPPPSNK---PKKPSP------PPKASPPTATPPPSENGPSAQT 180

Query: 181 PTTAPPPPNSANSLGGFGLFFSAGLAIMVALI 213
           P  APPP NSA SLGGF +FFSAGL + VALI
Sbjct: 181 PPAAPPPRNSATSLGGFAVFFSAGLTLAVALI 203

[Close]

BLAST of HG10006640 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein )

HSP 1 Score: 98.6 bits (244), Expect = 6.4e-21
Identity = 74/187 (39.57%), Postives = 103/187 (55.08%), Query Frame = 0


Query: 25  AATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDILFFNFTTGQHDVTEVTKAALDSCSS 84
           A  ++VGD   WT P +P  Y+ WA+ KTF VGD L F+F  G+HDV  V++AA ++C  
Sbjct: 22  AEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEK 81

Query: 85  SNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQKLSVNVRSQSSSPPTASPSPSPKS 144
             PIS +   P  I L+  G ++FIC+   HC FGQKLS+ V +       A+   +P +
Sbjct: 82  EKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAG-----ATGGATPGA 141

Query: 145 STPVSPTPSPHTGRPPKASPPTATPPPSNIAPSTQSPTTAPPPPNSANSLGGFGLFFSAG 204
               +P  +P TG     +PPTA        PS  S TT  P  N+A+SLGG   F  A 
Sbjct: 142 GATPAPGSTPSTG---GTTPPTA---GGTTTPSGSSGTTT-PAGNAASSLGG-ATFLVAF 195

Query: 205 LAIMVAL 212
           ++ +VAL
Sbjct: 202 VSAVVAL 195

[Close]

BLAST of HG10006640 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 7.3e-17
Identity = 66/165 (40.00%), Postives = 84/165 (50.91%), Query Frame = 0


Query: 10  VFLLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDILFFNFTTGQH 69
           V  L  +V   R + AA + VGDS GWT   N   Y  WASTKTF +GD + F +    H
Sbjct: 6   VAALACIVVMLRLSEAAVYKVGDSAGWTTIANVD-YKLWASTKTFHIGDTVLFEYNPQFH 65

Query: 70  DVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQKLSVNVRSQ 129
           +V  VT     SC++S PIS   +G  SITL+  G   F C   GHC  GQKL ++V   
Sbjct: 66  NVMRVTHPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKLDLHVLLP 125

Query: 130 SSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPPSNI 175
           +SS P + P  S  SS P +  P+      P  SP  A   PS +
Sbjct: 126 ASSTPLSDPPTSSSSSPPSTTIPAAGV---PGPSPSLAASLPSMV 166

[Close]

BLAST of HG10006640 vs. TAIR 10
Match: AT2G31050.1 (Cupredoxin superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 9.6e-17
Identity = 75/212 (35.38%), Postives = 104/212 (49.06%), Query Frame = 0


Query: 3   AKSMFAAVFLLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDILFF 62
           + + F ++ +L+A+           H VGDS GWTI      Y  WAST TF VGD L F
Sbjct: 6   SNAFFTSLLILVALFG--ISVGGTVHKVGDSDGWTI--MSVNYETWASTITFQVGDSLVF 65

Query: 63  NFTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQKL 122
            +    HDVTEVT    + C  S P++   +G   + L+  G +HFIC F GHC  GQKL
Sbjct: 66  KYNKDFHDVTEVTHNDYEMCEPSKPLARYETGSDIVILTKPGLQHFICGFPGHCDMGQKL 125

Query: 123 SVNVRSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKA-SPPTATP---PPSNIAPST 182
            ++V   +S  P A+P P P               RPP + S P+ +P    P N AP  
Sbjct: 126 QIHV-LPASLGPVAAPVPGPV--------------RPPSSFSSPSQSPLAESPVNHAPVQ 185

Query: 183 QSPTTAPPPPNSA-NSLGGFGLFFSAGLAIMV 210
                +P P ++A NS    GL F   L++++
Sbjct: 186 YQMGPSPAPHSAASNSNVWIGLCFLPLLSLLI 198

[Close]

BLAST of HG10006640 vs. TAIR 10
Match: AT2G26720.1 (Cupredoxin superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 5.3e-15
Identity = 64/173 (36.99%), Postives = 85/173 (49.13%), Query Frame = 0


Query: 12  LLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDILFFNFTTGQHDV 71
           LL+ V           H VG++ GWT+      Y  WAS++ F VGD L F +    HDV
Sbjct: 13  LLIFVTLFGVAVGGTVHKVGNTKGWTM--IGGDYEAWASSRVFQVGDTLVFAYNKDYHDV 72

Query: 72  TEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQKLSVNVRSQSS 131
           TEVT    + C SS P+   ++G  SI+L+  G +HFIC   GHC  GQKL ++V   +S
Sbjct: 73  TEVTHNDFEMCESSKPLRRYKTGSDSISLTKPGLQHFICGVPGHCKKGQKLQIHV-LPAS 132

Query: 132 SPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPPSNIAPSTQSPTTA 185
               A P P P  S   S +PSP     P   PP    P   + P+  S + A
Sbjct: 133 LGHVAVPVPGPVRSQSSSSSPSP----SPLVDPPVNNAPQYQMGPTPASHSAA 178

[Close]

BLAST of HG10006640 vs. TAIR 10
Match: AT3G20570.1 (early nodulin-like protein 9 )

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14
Identity = 72/211 (34.12%), Postives = 102/211 (48.34%), Query Frame = 0


Query: 4   KSMFAAVFLLLAVVAPPRRASAATHNVGDSLGWTIPPNPSTYSNWASTKTFLVGDILFFN 63
           KSM    F LL  +    RA A    VG + GWT+P     YS WA    F +GD L F 
Sbjct: 6   KSMMLCGFGLLCFLMIVDRAYAREFTVGGATGWTVPSGSQVYSQWAEQSRFQIGDSLLFV 65

Query: 64  FTTGQHDVTEVTKAALDSCSSSNPISAVRSGPASITLSAAGTRHFICSFSGHCGFGQKLS 123
           + + Q  V +VT+ A DSC++ +P +    G  S+TL+ +G  +FI     +C   +KL 
Sbjct: 66  YQSNQDSVLQVTRDAYDSCNTDSPTAKFADGKTSVTLNHSGPYYFISGNKDNCKKNEKLV 125

Query: 124 VNV-------RSQSSSPPTASPSPSPKSSTPVSPTPSPHTGRPPKASPPTATPPPSNIAP 183
           V V       ++ +SSPP+ +P+PS +S+      PS     PP +     TP P     
Sbjct: 126 VIVMADRSGNKNTASSPPSPAPAPSGESA------PS-----PPVSGTFEMTPAP----- 185

Query: 184 STQSPTTAPPPPNS-ANSLGGFGLFFSAGLA 207
              +PTT+   PNS A+SL        A LA
Sbjct: 186 ---TPTTSEDTPNSAASSLSFVAALLGAALA 197

The following BLAST results are available for this feature:

BLAST of HG10006640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139303.1	3.2e-83	78.64	cucumber peeling cupredoxin-like [Cucumis sativus] >KGN60692.1 hypothetical prot...	[more]
KAA0063541.1	5.5e-83	78.03	cucumber peeling cupredoxin-like [Cucumis melo var. makuwa] >TYJ97868.1 cucumber...	[more]
XP_038890974.1	4.7e-82	82.71	cucumber peeling cupredoxin-like [Benincasa hispida]	[more]
XP_008456869.1	2.3e-81	76.68	PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo]	[more]
XP_022965937.1	1.2e-74	74.06	cucumber peeling cupredoxin-like [Cucurbita maxima]	[more]

BLAST of HG10006640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q07488	9.0e-20	39.57	Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2	[more]
P42849	4.5e-19	43.24	Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1	[more]
P29602	3.8e-18	42.96	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
P80728	2.5e-17	44.44	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]
Q41001	9.3e-17	40.46	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]

BLAST of HG10006640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIZ5	1.6e-83	78.64	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G006870...	[more]
A0A5A7VCV3	2.7e-83	78.03	Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C3T3	1.1e-81	76.68	cucumber peeling cupredoxin-like OS=Cucumis melo OX=3656 GN=LOC103496681 PE=4 SV...	[more]
A0A6J1HLN3	6.0e-75	74.06	cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111465665 PE=...	[more]
A0A6J1FCM6	5.8e-70	72.17	cucumber peeling cupredoxin-like OS=Cucurbita moschata OX=3662 GN=LOC111444182 P...	[more]

BLAST of HG10006640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20230.1	6.4e-21	39.57	blue-copper-binding protein	[more]
AT5G26330.1	7.3e-17	40.00	Cupredoxin superfamily protein	[more]
AT2G31050.1	9.6e-17	35.38	Cupredoxin superfamily protein	[more]
AT2G26720.1	5.3e-15	36.99	Cupredoxin superfamily protein	[more]
AT3G20570.1	1.5e-14	34.12	early nodulin-like protein 9	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 26..139 e-value: 2.0E-37 score: 129.7
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 24..128
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 36..120 e-value: 7.6E-25 score: 86.7
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 26..128 score: 43.032551
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..190
None	No IPR available	PANTHER	PTHR33021:SF311	SUBFAMILY NOT NAMED	coord: 12..201
None	No IPR available	CDD	cd13920	Stellacyanin	coord: 26..126 e-value: 1.01523E-47 score: 150.156
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 12..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006640.1	HG10006640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0042795	snRNA transcription by RNA polymerase II
biological_process	GO:0042796	snRNA transcription by RNA polymerase III
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0019185	snRNA-activating protein complex
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0043565	sequence-specific DNA binding