HG10006628 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006628
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	calmodulin-like protein 7
Location	Chr07: 20482086 .. 20482511 (+)
RNA-Seq Expression	HG10006628
Synteny	HG10006628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCCATCATGAATTTTCTGTTATTGGCAGTTTTATTCGTTGCTGGTTTTGTCAATTTCCTTATTTATTTCCCCACCAAGAGATTCACCGCTTGGTTCCAATCTATAAAACCCTCTCCTCAAATTTCCCATTTCAAATCCACTCCCCTCCAACCACCGCCACCACCGTCGCCACCGTCACCGGAGCTGAAGAAAGTGTTTGGGACATTCGACAAGAACAACGATGGGTTCATAACGAAGAAGGAGCTGATGGAATCGCTAAAGAACATGAGGATGATGATTACAGAGAAAGATGCAGAGGAAATGTTGAAAGGGGTTGATGAAAATGGAGATGGGTTGATTGATTTTGAGGAGTTTTGTGTTTTGGGAGAGAAATTAGTGATGGGTTTTGAAGAAAAAAAGAAAAGAAAGATTGAAGAATAA

mRNA sequence

ATGGAACCCATCATGAATTTTCTGTTATTGGCAGTTTTATTCGTTGCTGGTTTTGTCAATTTCCTTATTTATTTCCCCACCAAGAGATTCACCGCTTGGTTCCAATCTATAAAACCCTCTCCTCAAATTTCCCATTTCAAATCCACTCCCCTCCAACCACCGCCACCACCGTCGCCACCGTCACCGGAGCTGAAGAAAGTGTTTGGGACATTCGACAAGAACAACGATGGGTTCATAACGAAGAAGGAGCTGATGGAATCGCTAAAGAACATGAGGATGATGATTACAGAGAAAGATGCAGAGGAAATGTTGAAAGGGGTTGATGAAAATGGAGATGGGTTGATTGATTTTGAGGAGTTTTGTGTTTTGGGAGAGAAATTAGTGATGGGTTTTGAAGAAAAAAAGAAAAGAAAGATTGAAGAATAA

Coding sequence (CDS)

ATGGAACCCATCATGAATTTTCTGTTATTGGCAGTTTTATTCGTTGCTGGTTTTGTCAATTTCCTTATTTATTTCCCCACCAAGAGATTCACCGCTTGGTTCCAATCTATAAAACCCTCTCCTCAAATTTCCCATTTCAAATCCACTCCCCTCCAACCACCGCCACCACCGTCGCCACCGTCACCGGAGCTGAAGAAAGTGTTTGGGACATTCGACAAGAACAACGATGGGTTCATAACGAAGAAGGAGCTGATGGAATCGCTAAAGAACATGAGGATGATGATTACAGAGAAAGATGCAGAGGAAATGTTGAAAGGGGTTGATGAAAATGGAGATGGGTTGATTGATTTTGAGGAGTTTTGTGTTTTGGGAGAGAAATTAGTGATGGGTTTTGAAGAAAAAAAGAAAAGAAAGATTGAAGAATAA

Protein sequence

MEPIMNFLLLAVLFVAGFVNFLIYFPTKRFTAWFQSIKPSPQISHFKSTPLQPPPPPSPPSPELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEFCVLGEKLVMGFEEKKKRKIEE

Homology

[Close]

BLAST of HG10006628 vs. NCBI nr
Match: XP_038889113.1 (calmodulin-like protein 3 [Benincasa hispida])

HSP 1 Score: 249.2 bits (635), Expect = 2.1e-62
Identity = 129/143 (90.21%), Postives = 134/143 (93.71%), Query Frame = 0


Query: 1   MEPIMNFLLLAVLFVAGFVNFLIYFPTKRFTAWFQSIKPSPQISHFKSTPLQ--PPPPPS 60
           MEPIMNFLLL VL VAGFVNFL+YFPTKRF+AWFQSIKPSPQISHFKS  LQ  PPPPPS
Sbjct: 1   MEPIMNFLLLVVLVVAGFVNFLLYFPTKRFSAWFQSIKPSPQISHFKSLSLQPPPPPPPS 60

Query: 61  PPSPELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFE 120
           PPSPELKKVFGTFDKNNDGFITKKELMESLKNMRM+ITEKDAEEMLKGVDENGDGLIDFE
Sbjct: 61  PPSPELKKVFGTFDKNNDGFITKKELMESLKNMRMLITEKDAEEMLKGVDENGDGLIDFE 120

Query: 121 EFCVLGEKLVMGFEEKKKRKIEE 142
           EFCVLGEKLVMGF EKKK  +E+
Sbjct: 121 EFCVLGEKLVMGFGEKKKICVED 143

[Close]

BLAST of HG10006628 vs. NCBI nr
Match: XP_008457058.1 (PREDICTED: calmodulin-like protein 7 [Cucumis melo])

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59
Identity = 124/146 (84.93%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 1   MEPIMNFLLLAVLFVAGFVNFLIYFPTKRFTAWFQSIKPSPQISHFKSTPLQPPPPPSPP 60
           MEPI NFLLL+VLFVAGFVNFL+YFPTKRFTAWFQSIKPS QI HFKSTPLQPPPPP PP
Sbjct: 1   MEPIFNFLLLSVLFVAGFVNFLLYFPTKRFTAWFQSIKPSSQIPHFKSTPLQPPPPPPPP 60

Query: 61  SP-------ELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDG 120
            P       ELKKVFGTFDKN+DGFITKKELMESLK+MRMMITEKDAEEMLK VDENGDG
Sbjct: 61  PPPPPPSAMELKKVFGTFDKNDDGFITKKELMESLKSMRMMITEKDAEEMLKEVDENGDG 120

Query: 121 LIDFEEFCVLGEKLVMGFEEKKKRKI 140
           LIDFEEFCVLGEKL+MGFEE KK  +
Sbjct: 121 LIDFEEFCVLGEKLLMGFEENKKTSV 146

[Close]

BLAST of HG10006628 vs. NCBI nr
Match: XP_004139293.1 (calmodulin-like protein 3 [Cucumis sativus] >KGN60706.1 hypothetical protein Csa_019409 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 4.8e-59
Identity = 123/150 (82.00%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MEPIMNFLLLAVLFVAGFVNFLIYFPTKRFTAWFQSIKPSPQISHFKSTPLQPPPPPSP- 60
           MEPI NFLLL+VLFVAGF+NFL+YFP+KRF+AWFQSIKPS QI+HFKSTPLQPPPPPSP 
Sbjct: 1   MEPIFNFLLLSVLFVAGFINFLLYFPSKRFSAWFQSIKPSSQITHFKSTPLQPPPPPSPS 60

Query: 61  --PSP------ELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENG 120
             PSP      E+KKVFGTFDKN+DGFITKKELMESLK+MRMMITEKDAEEMLKGVDENG
Sbjct: 61  PSPSPPPPSAMEMKKVFGTFDKNDDGFITKKELMESLKSMRMMITEKDAEEMLKGVDENG 120

Query: 121 DGLIDFEEFCVLGEKLVMGFEEKKKRKIEE 142
           DGLIDFEEFCVLG KL+MGFEE KK  +E+
Sbjct: 121 DGLIDFEEFCVLGGKLMMGFEENKKTSVED 150

[Close]

BLAST of HG10006628 vs. NCBI nr
Match: XP_022999398.1 (calmodulin-like protein 7 [Cucurbita maxima])

HSP 1 Score: 218.0 bits (554), Expect = 5.2e-53
Identity = 113/142 (79.58%), Postives = 124/142 (87.32%), Query Frame = 0


Query: 1   MEPIMNFLLLAVLFVAGFVNFLIYFPTKRFTAWFQSIKPSPQISHFKSTPLQPP-PPPSP 60
           ME +MN L LAVLFVAGFVNFL+YFPTKRFTAWFQSIKPSPQ  HFK T + PP P P  
Sbjct: 1   MESVMNLLFLAVLFVAGFVNFLMYFPTKRFTAWFQSIKPSPQSVHFKPTAVPPPSPAPEK 60

Query: 61  PSPELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEE 120
              E+KKVFGTFDKNNDGFITKKELMESLKNM MMITE++AEEM+KGVDENGDGLIDFEE
Sbjct: 61  KKSEMKKVFGTFDKNNDGFITKKELMESLKNMSMMITEREAEEMVKGVDENGDGLIDFEE 120

Query: 121 FCVLGEKLVMGFEEKKKRKIEE 142
           FCVLGEKLV+GFEEK++R  +E
Sbjct: 121 FCVLGEKLVVGFEEKQRRIEDE 142

[Close]

BLAST of HG10006628 vs. NCBI nr
Match: XP_022946838.1 (calmodulin-like protein 7 [Cucurbita moschata])

HSP 1 Score: 214.5 bits (545), Expect = 5.7e-52
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 0


Query: 1   MEPIMNFLLLAVLFVAGFVNFLIYFPTKRFTAWFQSIKPSPQISHFKSTPLQP-PPPPSP 60
           ME +MN L LAVLFVAGFVNFL+YFPTKRFTAWFQSIKPSPQ  HFK T + P  P P  
Sbjct: 1   MESVMNLLFLAVLFVAGFVNFLMYFPTKRFTAWFQSIKPSPQSVHFKPTAVPPLSPAPEK 60

Query: 61  PSPELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEE 120
              E+KKVFGTFDKN DGFITKKELMESLKNM MMITE++AEEM+KGVDENGDGLIDFEE
Sbjct: 61  KKSEMKKVFGTFDKNKDGFITKKELMESLKNMSMMITEREAEEMVKGVDENGDGLIDFEE 120

Query: 121 FCVLGEKLVMGFEEKKKRKIEE 142
           FCVLGEKLVMGFEEK++R  +E
Sbjct: 121 FCVLGEKLVMGFEEKQRRVEDE 142

[Close]

BLAST of HG10006628 vs. ExPASy Swiss-Prot
Match: Q9LNE7 (Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.5e-10
Identity = 34/79 (43.04%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 63  ELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEFCV 122
           ELK+VF  FDKN DG IT KEL E+L+++ + I +K+  +M++ +D NGDG +D +EF  
Sbjct: 5   ELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGE 64

Query: 123 LGEKLVMGFEEKKKRKIEE 142
           L  K +M  E++++  ++E
Sbjct: 65  L-YKTIMDEEDEEEEDMKE 82

[Close]

BLAST of HG10006628 vs. ExPASy Swiss-Prot
Match: Q2QVI1 (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica OX=39947 GN=CML28 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.3e-10
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 61  SPELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEF 120
           S EL+KVF  FDKN DG ITKKEL ES KN  + I + + +  +  +D NGDG +D EEF
Sbjct: 3   STELRKVFKMFDKNGDGRITKKELGESFKNFGIFIPDDELDATMDKIDANGDGCVDVEEF 62

Query: 121 CVL 124
            +L
Sbjct: 63  GLL 65

[Close]

BLAST of HG10006628 vs. ExPASy Swiss-Prot
Match: O22845 (Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 7.3e-10
Identity = 44/107 (41.12%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 32  AWF-----QSIKPSPQISHFKSTPLQPPPPPSPPS-----PELKKVFGTFDKNNDGFITK 91
           +WF     ++  PSP      ST L  P   S P+      ELK+VF  FDKN DG ITK
Sbjct: 30  SWFDKTLHKNSPPSP------STMLPSPSSSSAPTKRIDPSELKRVFQMFDKNGDGRITK 89

Query: 92  KELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEFCVLGEKLV 129
           +EL +SL+N+ + I +KD  +M+  +D NGDG +D +EF  L   +V
Sbjct: 90  EELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIV 130

[Close]

BLAST of HG10006628 vs. ExPASy Swiss-Prot
Match: Q9SRR7 (Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.6e-10
Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 63  ELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEFCV 122
           EL ++F  FD+N DG ITK+EL +SL+N+ + I +KD  +M++ +D NGDG +D EEF  
Sbjct: 5   ELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIEEFGG 64

Query: 123 LGEKLVMGFEEKK 136
           L + ++   +E++
Sbjct: 65  LYQTIMEERDEEE 77

[Close]

BLAST of HG10006628 vs. ExPASy Swiss-Prot
Match: Q9ZR02 (Calmodulin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=CML6 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = 0


Query: 61  SPELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEF 120
           S EL +VF  FDK+ DG IT KEL ES KN+ ++I E +  ++++ +D NGDG +D EEF
Sbjct: 3   STELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEF 62

Query: 121 CVLGEKLVMGFEEK 135
             L + +++  E++
Sbjct: 63  GELYKTIMVEDEDE 76

[Close]

BLAST of HG10006628 vs. ExPASy TrEMBL
Match: A0A1S3C5X4 (calmodulin-like protein 7 OS=Cucumis melo OX=3656 GN=LOC103496824 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.2e-60
Identity = 124/146 (84.93%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 1   MEPIMNFLLLAVLFVAGFVNFLIYFPTKRFTAWFQSIKPSPQISHFKSTPLQPPPPPSPP 60
           MEPI NFLLL+VLFVAGFVNFL+YFPTKRFTAWFQSIKPS QI HFKSTPLQPPPPP PP
Sbjct: 1   MEPIFNFLLLSVLFVAGFVNFLLYFPTKRFTAWFQSIKPSSQIPHFKSTPLQPPPPPPPP 60

Query: 61  SP-------ELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDG 120
            P       ELKKVFGTFDKN+DGFITKKELMESLK+MRMMITEKDAEEMLK VDENGDG
Sbjct: 61  PPPPPPSAMELKKVFGTFDKNDDGFITKKELMESLKSMRMMITEKDAEEMLKEVDENGDG 120

Query: 121 LIDFEEFCVLGEKLVMGFEEKKKRKI 140
           LIDFEEFCVLGEKL+MGFEE KK  +
Sbjct: 121 LIDFEEFCVLGEKLLMGFEENKKTSV 146

[Close]

BLAST of HG10006628 vs. ExPASy TrEMBL
Match: A0A0A0LL19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G007990 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.3e-59
Identity = 123/150 (82.00%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MEPIMNFLLLAVLFVAGFVNFLIYFPTKRFTAWFQSIKPSPQISHFKSTPLQPPPPPSP- 60
           MEPI NFLLL+VLFVAGF+NFL+YFP+KRF+AWFQSIKPS QI+HFKSTPLQPPPPPSP 
Sbjct: 1   MEPIFNFLLLSVLFVAGFINFLLYFPSKRFSAWFQSIKPSSQITHFKSTPLQPPPPPSPS 60

Query: 61  --PSP------ELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENG 120
             PSP      E+KKVFGTFDKN+DGFITKKELMESLK+MRMMITEKDAEEMLKGVDENG
Sbjct: 61  PSPSPPPPSAMEMKKVFGTFDKNDDGFITKKELMESLKSMRMMITEKDAEEMLKGVDENG 120

Query: 121 DGLIDFEEFCVLGEKLVMGFEEKKKRKIEE 142
           DGLIDFEEFCVLG KL+MGFEE KK  +E+
Sbjct: 121 DGLIDFEEFCVLGGKLMMGFEENKKTSVED 150

[Close]

BLAST of HG10006628 vs. ExPASy TrEMBL
Match: A0A6J1KJL5 (calmodulin-like protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111493780 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53
Identity = 113/142 (79.58%), Postives = 124/142 (87.32%), Query Frame = 0


Query: 1   MEPIMNFLLLAVLFVAGFVNFLIYFPTKRFTAWFQSIKPSPQISHFKSTPLQPP-PPPSP 60
           ME +MN L LAVLFVAGFVNFL+YFPTKRFTAWFQSIKPSPQ  HFK T + PP P P  
Sbjct: 1   MESVMNLLFLAVLFVAGFVNFLMYFPTKRFTAWFQSIKPSPQSVHFKPTAVPPPSPAPEK 60

Query: 61  PSPELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEE 120
              E+KKVFGTFDKNNDGFITKKELMESLKNM MMITE++AEEM+KGVDENGDGLIDFEE
Sbjct: 61  KKSEMKKVFGTFDKNNDGFITKKELMESLKNMSMMITEREAEEMVKGVDENGDGLIDFEE 120

Query: 121 FCVLGEKLVMGFEEKKKRKIEE 142
           FCVLGEKLV+GFEEK++R  +E
Sbjct: 121 FCVLGEKLVVGFEEKQRRIEDE 142

[Close]

BLAST of HG10006628 vs. ExPASy TrEMBL
Match: A0A6J1G4Z1 (calmodulin-like protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111450782 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.8e-52
Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 0


Query: 1   MEPIMNFLLLAVLFVAGFVNFLIYFPTKRFTAWFQSIKPSPQISHFKSTPLQP-PPPPSP 60
           ME +MN L LAVLFVAGFVNFL+YFPTKRFTAWFQSIKPSPQ  HFK T + P  P P  
Sbjct: 1   MESVMNLLFLAVLFVAGFVNFLMYFPTKRFTAWFQSIKPSPQSVHFKPTAVPPLSPAPEK 60

Query: 61  PSPELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEE 120
              E+KKVFGTFDKN DGFITKKELMESLKNM MMITE++AEEM+KGVDENGDGLIDFEE
Sbjct: 61  KKSEMKKVFGTFDKNKDGFITKKELMESLKNMSMMITEREAEEMVKGVDENGDGLIDFEE 120

Query: 121 FCVLGEKLVMGFEEKKKRKIEE 142
           FCVLGEKLVMGFEEK++R  +E
Sbjct: 121 FCVLGEKLVMGFEEKQRRVEDE 142

[Close]

BLAST of HG10006628 vs. ExPASy TrEMBL
Match: A0A6J1CMI5 (calmodulin-like protein 7 OS=Momordica charantia OX=3673 GN=LOC111012994 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 9.3e-32
Identity = 83/140 (59.29%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 2   EPIMNFLLLAVLFVAGFVNFLIYFPTKRFTAWFQSIKPSPQISHFKSTPLQPPPPPSPPS 61
           + +MN LLLAVLFVAG VNFL+YFPTKRF+AW   +K SP      +  + PP PP+   
Sbjct: 67  QSMMNILLLAVLFVAGLVNFLVYFPTKRFSAW---LKQSPTKPAAVAAAVAPPQPPT--- 126

Query: 62  PELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEFC 121
            EL+K+F TFDKNNDG+IT+KEL ESL+N    I E++AEE+ +GVDENGDGLIDFEEFC
Sbjct: 127 -ELRKIFRTFDKNNDGYITRKELTESLRN---WIAEREAEELFEGVDENGDGLIDFEEFC 186

Query: 122 VLGEKLVMGFEEKKKRKIEE 142
           VL EKL    EE+++   EE
Sbjct: 187 VLAEKLRKEKEEEEEDDDEE 196

[Close]

BLAST of HG10006628 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family )

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-11
Identity = 34/79 (43.04%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 63  ELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEFCV 122
           ELK+VF  FDKN DG IT KEL E+L+++ + I +K+  +M++ +D NGDG +D +EF  
Sbjct: 5   ELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGE 64

Query: 123 LGEKLVMGFEEKKKRKIEE 142
           L  K +M  E++++  ++E
Sbjct: 65  L-YKTIMDEEDEEEEDMKE 82

[Close]

BLAST of HG10006628 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 65.1 bits (157), Expect = 5.2e-11
Identity = 44/107 (41.12%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 32  AWF-----QSIKPSPQISHFKSTPLQPPPPPSPPS-----PELKKVFGTFDKNNDGFITK 91
           +WF     ++  PSP      ST L  P   S P+      ELK+VF  FDKN DG ITK
Sbjct: 30  SWFDKTLHKNSPPSP------STMLPSPSSSSAPTKRIDPSELKRVFQMFDKNGDGRITK 89

Query: 92  KELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEFCVLGEKLV 129
           +EL +SL+N+ + I +KD  +M+  +D NGDG +D +EF  L   +V
Sbjct: 90  EELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIV 130

[Close]

BLAST of HG10006628 vs. TAIR 10
Match: AT3G07490.1 (ARF-GAP domain 11 )

HSP 1 Score: 64.7 bits (156), Expect = 6.8e-11
Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 63  ELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEFCV 122
           EL ++F  FD+N DG ITK+EL +SL+N+ + I +KD  +M++ +D NGDG +D EEF  
Sbjct: 5   ELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIEEFGG 64

Query: 123 LGEKLVMGFEEKK 136
           L + ++   +E++
Sbjct: 65  LYQTIMEERDEEE 77

[Close]

BLAST of HG10006628 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family )

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = 0


Query: 61  SPELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEF 120
           S EL +VF  FDK+ DG IT KEL ES KN+ ++I E +  ++++ +D NGDG +D EEF
Sbjct: 3   STELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEF 62

Query: 121 CVLGEKLVMGFEEK 135
             L + +++  E++
Sbjct: 63  GELYKTIMVEDEDE 76

[Close]

BLAST of HG10006628 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family )

HSP 1 Score: 62.0 bits (149), Expect = 4.4e-10
Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 63  ELKKVFGTFDKNNDGFITKKELMESLKNMRMMITEKDAEEMLKGVDENGDGLIDFEEFCV 122
           EL +VF  FDKN DG I K EL +  K++ +M+ E +  EM+  +D NGDG +D +EF  
Sbjct: 5   ELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGS 64

Query: 123 LGEKLVMGFEEKK 136
           L +++V   EE++
Sbjct: 65  LYQEMVEEKEEEE 77

The following BLAST results are available for this feature:

BLAST of HG10006628 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889113.1	2.1e-62	90.21	calmodulin-like protein 3 [Benincasa hispida]	[more]
XP_008457058.1	1.3e-59	84.93	PREDICTED: calmodulin-like protein 7 [Cucumis melo]	[more]
XP_004139293.1	4.8e-59	82.00	calmodulin-like protein 3 [Cucumis sativus] >KGN60706.1 hypothetical protein Csa...	[more]
XP_022999398.1	5.2e-53	79.58	calmodulin-like protein 7 [Cucurbita maxima]	[more]
XP_022946838.1	5.7e-52	78.87	calmodulin-like protein 7 [Cucurbita moschata]	[more]

BLAST of HG10006628 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNE7	2.5e-10	43.04	Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1	[more]
Q2QVI1	4.3e-10	52.38	Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
O22845	7.3e-10	41.12	Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2	[more]
Q9SRR7	9.6e-10	42.47	Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1	[more]
Q9ZR02	1.6e-09	43.24	Calmodulin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=CML6 PE=2 SV=1	[more]

BLAST of HG10006628 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C5X4	6.2e-60	84.93	calmodulin-like protein 7 OS=Cucumis melo OX=3656 GN=LOC103496824 PE=4 SV=1	[more]
A0A0A0LL19	2.3e-59	82.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G007990 PE=4 SV=1	[more]
A0A6J1KJL5	2.5e-53	79.58	calmodulin-like protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111493780 PE=4 SV=1	[more]
A0A6J1G4Z1	2.8e-52	78.87	calmodulin-like protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111450782 PE=4 SV=...	[more]
A0A6J1CMI5	9.3e-32	59.29	calmodulin-like protein 7 OS=Momordica charantia OX=3673 GN=LOC111012994 PE=4 SV...	[more]

BLAST of HG10006628 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05990.1	1.8e-11	43.04	EF hand calcium-binding protein family	[more]
AT2G43290.1	5.2e-11	41.12	Calcium-binding EF-hand family protein	[more]
AT3G07490.1	6.8e-11	42.47	ARF-GAP domain 11	[more]
AT4G03290.1	1.2e-10	43.24	EF hand calcium-binding protein family	[more]
AT4G12860.1	4.4e-10	42.47	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 99..127 e-value: 0.0011 score: 28.2 coord: 63..91 e-value: 4.5E-5 score: 32.8
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 63..121 e-value: 1.4E-12 score: 47.8
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 95..130 score: 12.253878
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 59..94 score: 12.588623
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 63..121 e-value: 3.77611E-17 score: 68.7285
None	No IPR available	GENE3D	1.10.238.10		coord: 56..139 e-value: 1.8E-20 score: 75.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..62
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 5..138
None	No IPR available	PANTHER	PTHR10891:SF796	CALCIUM-BINDING PROTEIN CML30-RELATED	coord: 5..138
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 108..120
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 72..84
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 63..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006628.1	HG10006628.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005509	calcium ion binding