HG10006512 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006512
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	PITH domain-containing protein
Location	Chr07: 19396898 .. 19401595 (+)
RNA-Seq Expression	HG10006512
Synteny	HG10006512

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCGCATCTGCCACCGCTATTCATCGGAATCAGGTGAGTGATTCAAGTTCTTGCAGCGTTTGGTTCGGAAATTCTTGCTTAATTTGTTTTGAAATGATCTAAGATGATGTTAATACTTGAATCTGGCGATTGAGTTTTGAGGATGGAAGTTTCAGAATTTTATTGCTTTCAGCTTAGTTTTGTTCTTCATACTGATGCTTTGTTTTTAACCAGGTTGATCTATCCGACTTTATTAACTGGTCTGGTGTCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAACCAGGTGCTGTTTTTTATTATTTTGACTAGACCTGTTTGTTAGTTGCAAGTACTTCATTGTAGTTCTTTTTGAATTTCTTTACATGGTTATATAATTCATGTCTCGATTTAATGAAGTTAAAGATGGTGCTGAGTTAGACTTGTGTTCTTGCAGAATGTAATTTACATCTCACTTTCTTTCTAATTGCAAATATTTTGTGCATTTAATCTTCTTGGGAAACTTTATGTGGGAATGGTGTGGGGGAGGGGGTGGGGTTTGCATCTGCTGAGATGGGAAGTTGGCAAGGTCGGGATAGGTATATGGAAGTTGGCGAATGTGAATTTAGCTCCATGAGCCAAGTTGGTGAACATTTCCCTTTGAAAAGAGCTGTTGGTCAATTCATTGTTAATTCGTAACAATGAACTTCCTTCCCTCTCATGTTTGTTTTTTTATTTCCAATTTGGAAGACATCTTTGTAATATTGAGTTACAAGTTTTGTCTAGTCTTTCTCCATTTTTAGTAATACGCGTAGTTGGGTTCTTCAGCTATCTGGAATCTTTTGTTTTTTTTTTTTAACTCCCCATCCCCCTCTTTCACTCTGATTCTGGAGGCCAAAATCTCAAAGAAGATCAAGTTATCACCTAAATGGTTTCTTTGGGAAGATTAAACGCACACCATAGACTTTGTCTGAAAGCCGTCATCTATGGTTCTGGGCTGTCAGTGGGGAGTGTGTTGTGTATGAAAACGATACAAGATAAAGATAATTTGTTGTGGAGATGTCACTTTTTAGGCACTTGTTTGGAGTCAGTTTGACTACTCCCAAAGATTGTAGGGATGTGGTGGCGAAGGAGCTTGTTAAGCTAAATTTCCATGATAAGGGTCTGAATCATTGGCAAAAAAATTTCTTTGCTGTTTTGTTGAATCCATGGATTGAAAGTGAAAGAAGTATAGTATATTGAGGGTAGTCTTATAAGAGATTTGGAGTGTGGAACATCTTAATTTCTCTCTATTCTGGTGTTCTGGTCTATAGTGTTATGAAATTTTCCTTCATTTTTTGTTCATAACTATTGGACCAACCTATTGTAATTTTTTTTTTAGATTGCTTATTTGTTTGGGTCTGTTTTTTGGGCCACTCCTTTTGTACATTCTTCATAATATTTTTTTTTTTGGATATGACATTCATTCATGATATTGAAAGTTGATGTATGAAAAAAATATATATGCAGCCTTAGGATTGCTCGAGTCCAAGTCTTATCAAGTGGTTCTATATCTAAGCATTTTGATGATTATTCACCTTGAGATATCTGTTCAACTAAATTGTTTTTACTTCTTCAGAGCTTTAGTCTATGTCTTGTATTATGGTTCTTGCACTGTATTGGCAAGTTAGAAGATTTTTATTATTGTTTCCTCTCATGTACTTTGAGCATTAGACTCATTCATTACTTTAATGAAAAGTCTTGTTTCCGTTTAAAAAAAAAAAAAAGATAAAAATATATATGCATATCATTTTGGTCCTTCTACTTTGGACCTATTTCATTTTAGTCTCTGTACTTTTAAATAATCAAATTTAGTCTCAATACTTTTAATAAAGTTTAAATTTACTCTTTATTATTAGTTTGAAGTTAATTTTATCGAATTTGGTGAAGTAATAGTAATATTAATTTCCATTCTATAAAATGTGAATATATTTTCAAAATAGATAGAGGGAAGGCTAATAAGGACTTACTTTTTTGGGCAAAATTAACATTATGTAATGTGCGGACTAATTTTAAGATTTATTGAAAGTACGATAACTAAATTTGTACATTTTAAAAGTACAGGACAAATAAAACAAGTGCCCAGTAGAGGGACTAACATGATATTATAACCTAAACGAAAATCTTCACGATAGAATGGTTATCTCTTTTCCCCCTTAATTTCTTCCAACAGCCAAGAGAAATTATTATACCGAGGGTTTGAATCGACTTTTTTTTTTCTTTCTAAATTAGACTTGTAGGGACAATGATAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTTTTGATATACATACCTTTTAATCAAGTCATTAAATTGCATTCCTTGGTCATTAAGGGACCTGAAGAGGAAGGTGAGTACTCTATCGTTTCCTCCGTTTATTAATTCTAATCCATAGTTTCTTTTCTTCTGAGTATTTCAGTACTGCTTGTCATGTATAATTATAATTCATCTAATCTATTGGCATAAAACATTATGTAACATGTCTTACAAATCCAACGTGGCCAATGAGGGTGTGATAATTCCATGTATAATTTTTACTATTTGATTATTGTCATTTTGGGCTTCCTGCCTCTTGTCCCTCCAGTGCTCTAGTCTAGTCTTGTAAATCCGTTGTCGTACGGCAATTTTACGACAACTTTTTTGGTATGGTGAGGGAGTAATGGATCATGAACCGAGAAATGGAAAGTTTCTCAGGGTTAGAAAGAAAAATAACCTTGAGTTTGGGAGTGGATAAATGTGCTTTCTTGGGTTTCTATCAAAAACTTTTGTAATTTTCTCTAATCTTAGTCTCAGTCTATTGAGAAGGTTCTTTTTTAATACTTCTTGGCTGTTGGAGGATACCAAATCCTACTCCTCCCTGCCCTTTAGTTACGCTTCTACCTCTATTTATCTCTCTATTCAATCAGATATATTGCAATATCTCTTTTTAAATGAAAAATGTATTGCCATGGAATGGTGCAATCACTTAACCACGTACATATTGTCTTTCACCTTGCTCTCTTTTATTCTGCTTAATTTACAAGTCACATGATTCTAATACTGAGGTTGTTCCCCAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAAGAAAATATGGGATTTGGGTAAACTAATTGTTTTCTTTAGTTAATATTTGGTGCAAGTGCTTCCTTGATATTATCAGTTGATGATTGTTTTTTTCATCAACGTTGCAGCAACGTCAATGACTACCCTCCCAGCGACACAATTGTGTTGTCCTCAGATAATCTTACGGTAGATTTTCCCATACTTGTATCTGTATCTCATCACAAAATGGAAAACTCTTTAGGGAGAGACTATACACAGAATTGGGAGATCATTGTTTTTTTGTTATGCTTCCTAGGGAAAGCCAGAGGTTGTAAAGTACGTGAAATTTCAAAATGTTCGTAGGTAAGTCATTTCTGTCATCAATGTTAATTGCCTTTGTTTAGATCGTACATTGTAAGTATTGGTTGATTGTTCTGAATAATTTAAATCTTTTATCAGCTTGACAATTTTTATAGAGGATAACCAATCCGGAGCTGACACTACAAAAATTCAAAAGATTGCCTTGTACGGAACAACGTAAGTTGTTTTAACAATTTGAGTTAATTTTAGTCTATTTTTTCTTTTCCATGTTTTAACTGAATTACCGTATTGCACAATCAGCAAGCTTGGATAATATGAAACTATATTTTAATTACTGACTAATAACATTTTCGAGGAAAGTAATAGGTGCCTTTTCCTTTAAGCAATGCTTAGACTAGTTCATCTTTGGAGTTTCCCTACCAGAGTTTTGCTACTTTCATCCTTACTTGATGTTGTCTAACAGATATTTTAAACCTCCTCTTTCTTTTGTGAATTCTTTAATTAGTATACAGTATACACATTTTTTGTTAGCAGCGGTCGGGACTGGTATATTTTTTTTTCTGATAAAAACAACTTTCTTAAAGAAAAATGGAAGAATACAAGAGCTTATAAAAAACTAAGCCTACCATAGAATAGAACCCCACTAAAGAAAGGAACTCTAACTGTACAAAATGGTTCGTATATAGTTCTTATAGAATAGTTACAAAAAGTCTTTAAGATCGAAGCCCAAAGGGAAACAAAGAATTTGACAAGAGACCAAATTCACTAGGATCCCTTTATGTCCCTCTAAACACTAAGTAATTCGACTTCTCCCAAAGAACCCATAAAATAGCGCACACCCCTGCAAGTGACAAAAATGGACCTTCTCATGAAGGGGCTTATGAATGAGGAACTCATTGATCATAACATTCGTGTCTCTGTGTCGAGCTAGCGAAAAACCAAACGTCTGAAAGAAGTAATCCCAAACCAAACTTGCAAACTCGCAACTCCAAAAAATATGGTCCAAGTAGAGACTAATATATTGAATAGTCCGCTTGAGTTCCTTTTTCCATATTCTATTCAGTACAAACTACGATCCTCCATGAATTATGTAGACCATCTCATATACTGTAATCTTGCTCCTTGTTGAGATTATGACCCATAGTGGGATTCGAATAGAGAAAAAGAACTGTTCAACTCCATTTCATTATTTCTTTATGCTTTTGTGAAATGTTGAAGTTGTTGATCTGTTTATGCAGAGTTGAAACAACTGACATGAAGGGTCTGAAGAAGATCGAGGATCACTGA

mRNA sequence

ATGGCTGCCGCATCTGCCACCGCTATTCATCGGAATCAGGTTGATCTATCCGACTTTATTAACTGGTCTGGTGTCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAACCAGACTTGTAGGGACAATGATAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTTTTGATATACATACCTTTTAATCAAGTCATTAAATTGCATTCCTTGGTCATTAAGGGACCTGAAGAGGAAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAAGAAAATATGGGATTTGGCAACGTCAATGACTACCCTCCCAGCGACACAATTGTGTTGTCCTCAGATAATCTTACGGGAAAGCCAGAGGTTGTAAAGTACGTGAAATTTCAAAATGTTCGTAGCTTGACAATTTTTATAGAGGATAACCAATCCGGAGCTGACACTACAAAAATTCAAAAGATTGCCTTGTACGGAACAACAGTTGAAACAACTGACATGAAGGGTCTGAAGAAGATCGAGGATCACTGA

Coding sequence (CDS)

ATGGCTGCCGCATCTGCCACCGCTATTCATCGGAATCAGGTTGATCTATCCGACTTTATTAACTGGTCTGGTGTCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAACCAGACTTGTAGGGACAATGATAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTTTTGATATACATACCTTTTAATCAAGTCATTAAATTGCATTCCTTGGTCATTAAGGGACCTGAAGAGGAAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAAGAAAATATGGGATTTGGCAACGTCAATGACTACCCTCCCAGCGACACAATTGTGTTGTCCTCAGATAATCTTACGGGAAAGCCAGAGGTTGTAAAGTACGTGAAATTTCAAAATGTTCGTAGCTTGACAATTTTTATAGAGGATAACCAATCCGGAGCTGACACTACAAAAATTCAAAAGATTGCCTTGTACGGAACAACAGTTGAAACAACTGACATGAAGGGTCTGAAGAAGATCGAGGATCACTGA

Protein sequence

MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

Homology

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BLAST of HG10006512 vs. NCBI nr
Match: XP_038891254.1 (PITH domain-containing protein At3g04780 [Benincasa hispida])

HSP 1 Score: 351.3 bits (900), Expect = 4.9e-93
Identity = 174/176 (98.86%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           MAAASAT IHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL
Sbjct: 1   MAAASATGIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLS DNLTG
Sbjct: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. NCBI nr
Match: XP_022946891.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946893.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022999328.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_022999329.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_023521729.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023521946.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545536.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545537.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545538.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >KAG6599300.1 PITH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030300.1 PITH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.5 bits (898), Expect = 8.3e-93
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLS DNLTG
Sbjct: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSGAD TK+QKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. NCBI nr
Match: XP_008455826.1 (PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo] >KAA0063617.1 PITH domain-containing protein [Cucumis melo var. makuwa] >TYK18409.1 PITH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 348.2 bits (892), Expect = 4.1e-92
Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           MAAASATAI+RNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL
Sbjct: 1   MAAASATAINRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           LIYIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLS DNLTG
Sbjct: 61  LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSG DTTKIQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. NCBI nr
Match: XP_022937687.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023537940.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348.2 bits (892), Expect = 4.1e-92
Identity = 170/176 (96.59%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           MAAASATAIHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           L+YIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLS DNLTG
Sbjct: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSGADTTK+QKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. NCBI nr
Match: XP_022965977.1 (PITH domain-containing protein At3g04780-like [Cucurbita maxima])

HSP 1 Score: 344.7 bits (883), Expect = 4.6e-91
Identity = 169/176 (96.02%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           MAAASATAIHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           L+YIPFNQVIKLHSLVIKG EEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLS DNLTG
Sbjct: 61  LMYIPFNQVIKLHSLVIKGHEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSGADTTK+QKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. ExPASy Swiss-Prot
Match: Q9SQZ9 (PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g04780 PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 9.3e-71
Identity = 132/176 (75.00%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           M+A SA+ I + QVDL DFI+WSGVECLNQ+ SH+  NAL Q  R+++ L LESDADEQL
Sbjct: 1   MSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQL 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           LIYIPFNQVIKLHS  IKGPEEEGP+TVK FSNKE+M F NVND+PPSDT  L+ +NL G
Sbjct: 61  LIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KP V+KYVKFQNVRSLTIFIE NQSG++ TK+QKIALYG+TVETTDMKGLKKIEDH
Sbjct: 121 KPVVLKYVKFQNVRSLTIFIEANQSGSEVTKVQKIALYGSTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. ExPASy Swiss-Prot
Match: O43396 (Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 69/170 (40.59%), Postives = 101/170 (59.41%), Query Frame = 0


Query: 7   TAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPF 66
           T I +  +DL  FIN +G ECLN++  H F N     C   D+  LESD DEQLLI + F
Sbjct: 117 TDIPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDTTFLESDCDEQLLITVAF 176

Query: 67  NQVIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDYPPSDTIVLSSDNLTGKPEV 126
           NQ +KL+S+  +GP+  +GP+ VK+F N   +M F       P+  + L+ D++     V
Sbjct: 177 NQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIV 236

Query: 127 -VKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKI 174
            ++YVKFQNV S+TIF++ NQ   +TT+I      GT V+ T+M   K++
Sbjct: 237 PLRYVKFQNVNSVTIFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]

BLAST of HG10006512 vs. ExPASy Swiss-Prot
Match: Q920J4 (Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 122.1 bits (305), Expect = 6.3e-27
Identity = 68/170 (40.00%), Postives = 100/170 (58.82%), Query Frame = 0


Query: 7   TAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPF 66
           T I +  +DL  FIN +G ECLN++  H F N     C   D   LESD DEQLLI + F
Sbjct: 117 TDIPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDLSFLESDCDEQLLITVAF 176

Query: 67  NQVIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDYPPSDTIVLSSDNLTGKPEV 126
           NQ +KL+S+  +GP+  +GP+ VK+F N   +M F       P+  + L+ D++     V
Sbjct: 177 NQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIV 236

Query: 127 -VKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKI 174
            ++YVKFQNV S+T+F++ NQ   +TT+I      GT V+ T+M   K++
Sbjct: 237 PLRYVKFQNVNSVTLFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]

BLAST of HG10006512 vs. ExPASy Swiss-Prot
Match: Q8CDN6 (Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 67/168 (39.88%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 9   IHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQ 68
           I +  +DL  FIN +G ECLN++  H F N     C   D   LESD DEQLLI + FNQ
Sbjct: 119 IPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDMSFLESDCDEQLLITVAFNQ 178

Query: 69  VIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDYPPSDTIVLSSDNLTGKPEV-V 128
            +KL+S+  +GP+  +GP+ VK+F N   +M F       P+  + L+ D++     V +
Sbjct: 179 PVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPL 238

Query: 129 KYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKI 174
           +YVKFQNV S+T+F++ NQ   +TT+I      GT V+ T+M   K++
Sbjct: 239 RYVKFQNVNSVTLFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]

BLAST of HG10006512 vs. ExPASy Swiss-Prot
Match: Q9USR1 (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=txl1 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-22
Identity = 66/178 (37.08%), Postives = 97/178 (54.49%), Query Frame = 0


Query: 3   AASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLI 62
           A+S++A  +    L   I    +ECLNQ   H   +A N     N S  LESD DEQL+I
Sbjct: 116 ASSSSAPVKGFASLQGCIENPQLECLNQQDDHDLKSAFN----SNPSSFLESDVDEQLMI 175

Query: 63  YIPFNQVIKLHSLVI---KGPEEEGPRTVKLFSNK-ENMGFGNVNDYPPSDTIVLSSDNL 122
           YIPF +V+K+HS+ I   KG     P+T+KL+ N+  N+ F +   + P+  I       
Sbjct: 176 YIPFLEVVKVHSIAITPVKGETSSAPKTIKLYINQPNNLSFEDAESFTPTQVIEDIVYEQ 235

Query: 123 TGKPEVV--KYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIE 175
             +P ++  ++VKFQ V SL IFI  N    +TTKI ++ L+G  V  +    L+K+E
Sbjct: 236 DDQPTIIPLRFVKFQRVNSLVIFIYSNVGEEETTKISRLELFGEPVGDSSKGKLQKVE 289

[Close]

BLAST of HG10006512 vs. ExPASy TrEMBL
Match: A0A6J1KJE4 (PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC111493734 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.0e-93
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLS DNLTG
Sbjct: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSGAD TK+QKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. ExPASy TrEMBL
Match: A0A6J1G4V6 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111450832 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.0e-93
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLS DNLTG
Sbjct: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSGAD TK+QKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. ExPASy TrEMBL
Match: A0A5D3D4D2 (PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001340 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92
Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           MAAASATAI+RNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL
Sbjct: 1   MAAASATAINRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           LIYIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLS DNLTG
Sbjct: 61  LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSG DTTKIQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. ExPASy TrEMBL
Match: A0A6J1FBX4 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111444016 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92
Identity = 170/176 (96.59%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           MAAASATAIHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           L+YIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLS DNLTG
Sbjct: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSGADTTK+QKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. ExPASy TrEMBL
Match: A0A1S3C1X8 (PITH domain-containing protein At3g04780 OS=Cucumis melo OX=3656 GN=LOC103495923 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92
Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           MAAASATAI+RNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL
Sbjct: 1   MAAASATAINRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           LIYIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLS DNLTG
Sbjct: 61  LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSG DTTKIQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. TAIR 10
Match: AT3G04780.1 (Protein of unknown function (DUF1000) )

HSP 1 Score: 267.7 bits (683), Expect = 6.6e-72
Identity = 132/176 (75.00%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60
           M+A SA+ I + QVDL DFI+WSGVECLNQ+ SH+  NAL Q  R+++ L LESDADEQL
Sbjct: 1   MSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQL 60

Query: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTG 120
           LIYIPFNQVIKLHS  IKGPEEEGP+TVK FSNKE+M F NVND+PPSDT  L+ +NL G
Sbjct: 61  LIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 177
           KP V+KYVKFQNVRSLTIFIE NQSG++ TK+QKIALYG+TVETTDMKGLKKIEDH
Sbjct: 121 KPVVLKYVKFQNVRSLTIFIEANQSGSEVTKVQKIALYGSTVETTDMKGLKKIEDH 176

[Close]

BLAST of HG10006512 vs. TAIR 10
Match: AT2G25950.1 (Protein of unknown function (DUF1000) )

HSP 1 Score: 62.0 bits (149), Expect = 5.5e-10
Identity = 45/154 (29.22%), Postives = 79/154 (51.30%), Query Frame = 0


Query: 20  INWSGVECLNQNFS---HTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSL- 79
           I+ S V  LN++ S    +   A  Q    +   L  ++ D +LL+++PF   +K+ S+ 
Sbjct: 24  IDLSKVSALNESVSGSAKSVFKAWEQRLHSSGEHLESNEGDPELLVFVPFTSDVKIKSIS 83

Query: 80  VIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSSDNLTGKPEV-VKYVKFQNVR 139
           ++ GPE   P  +++F N+E + F +           L ++NL G  E   +Y KFQ+V 
Sbjct: 84  IVGGPEGTSPSKLRVFINREGIDFSDAESMQAVQEWEL-AENLQGVLEYQTRYSKFQSVG 143

Query: 140 SLTIFIEDNQSGADTTKIQKIALYGTTVETTDMK 169
           ++T+   ++  G DTT+I+ I   G   E T +K
Sbjct: 144 NITLHFPES-FGGDTTQIRYIGFKG---EATQLK 172

The following BLAST results are available for this feature:

BLAST of HG10006512 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891254.1	4.9e-93	98.86	PITH domain-containing protein At3g04780 [Benincasa hispida]	[more]
XP_022946891.1	8.3e-93	98.30	PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892...	[more]
XP_008455826.1	4.1e-92	97.73	PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo] >KAA0063617.1...	[more]
XP_022937687.1	4.1e-92	96.59	PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129...	[more]
XP_022965977.1	4.6e-91	96.02	PITH domain-containing protein At3g04780-like [Cucurbita maxima]	[more]

BLAST of HG10006512 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQZ9	9.3e-71	75.00	PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g...	[more]
O43396	1.3e-27	40.59	Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3	[more]
Q920J4	6.3e-27	40.00	Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3	[more]
Q8CDN6	1.1e-26	39.88	Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3	[more]
Q9USR1	1.2e-22	37.08	Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...	[more]

BLAST of HG10006512 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJE4	4.0e-93	98.30	PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1G4V6	4.0e-93	98.30	PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3D4D2	2.0e-92	97.73	PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1FBX4	2.0e-92	96.59	PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S3C1X8	2.0e-92	97.73	PITH domain-containing protein At3g04780 OS=Cucumis melo OX=3656 GN=LOC103495923...	[more]

BLAST of HG10006512 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04780.1	6.6e-72	75.00	Protein of unknown function (DUF1000)	[more]
AT2G25950.1	5.5e-10	29.22	Protein of unknown function (DUF1000)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010400	PITH domain	PFAM	PF06201	PITH	coord: 16..160 e-value: 5.6E-39 score: 133.7
IPR010400	PITH domain	PROSITE	PS51532	PITH	coord: 5..176 score: 52.778233
IPR037047	PITH domain superfamily	GENE3D	2.60.120.470	PITH domain	coord: 5..176 e-value: 3.2E-54 score: 185.1
IPR045099	PITH domain-containing protein 1-like	PANTHER	PTHR12175	AD039 HT014 THIOREDOXIN FAMILY TRP26	coord: 3..176
None	No IPR available	PANTHER	PTHR12175:SF5	THIOREDOXIN LIKE 1	coord: 3..176
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 7..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006512.1	HG10006512.1	mRNA