HG10006504 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006504
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Zeta-carotene desaturase
Location	Chr07: 19324102 .. 19327847 (-)
RNA-Seq Expression	HG10006504
Synteny	HG10006504

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGAATCTGTTACTGTCCACCGCTTCCTCCATCTCTATCCCCCAAGGTTTGTATCTTTTACGCCGGTGGCTTCATTTCAACTCGCGGTCCTTTTCTGATCCTAATTCTCTCCGATTCACTTTGAACCATTCGTTTTGTAGACGGTATCCGCCATAAGATGCTTCTCAAGCTCGCAGGAGAATTATAACGGTAGCCGGAAGAAAGAGGCATCTGCGATTGTGAAAATCGCCGTGAGTGGAGTCACAGAGCTTCTTAGGCTTTTCTCCTCTCCGATCAGTAAGAGGTAATTTCGTTCATGAAATCCACGCTCGCTTCGTATTACGAGGGGAATTAGGGATTTGTTGTTCTAATTTCTGTAGATGTTTGCTTAGTTTGACGCTTGAATAGCTATTGAACATGCGACCAAGATATATGAATACAATTCTGTTTGGCCGTGTCTGTGTTGCAGAGTTGATGGAGTTGGGGATAATCAGGGAGAGGAGTTTGTAGTTACAGACGTTGATGAGATTCTAAATATCTTGAAATCAGATTATGAGAATGCTTACTTTGTTACTGGTACATTCATGTTCCACACTTTCCATAGCTGATTCTTTGTTTTTCTTTATCATACTTCGATTTCTGAGTTCTTCCCTTATAAAATAATTATCATTCAACCTATATTTTCAAATTTTTAACTTATTTTCATTTTGTTTGACAAATACTCCAACCCTGAATTCTGTTCACCAAAGGGTATATGTTCTTGTATAAGGGTATGCTGTTTGCGTTTAGGTACTAGAATTATGAAATGTTTTAGTGATTGCTACTGGAGTTTGAAAAGTTCAGCTCATTGCCATCTTTTTTATGCTTCTGTTATAATAAATCTAATGCATTTCTGACTCACAATTTATACATTGAGATTGTAAAGCTGCAAATTAGGTAACCTTTATTGAGTAGGTGTTTCTAAGTTCTTTCTGGGAGAAGGGTAATTTATTGTGGCAAGCTAGCTTCTTTGCAATATTATGAGGGTTTGGTTTGAGTAGAGAGGTGGAGAGGTCATGTGATGAGGTTTGAGAGGTGGTGAGGTTCAATGCCTTCGGTCATCAAGACTTTTTGTAATTATGACCTAAGTACGATTTTGTTAGACTAGAGTCCCTTTGTGTAGTTTTTGGGGTCTCTCTGTTTATGTTGGGCTGGTTTTTTCTCTGTCCTTATACACTTTTTTCATTTCTCTTGCTGAAAACTTGGTTTCTTACCAAACCAAATATTGATATGTATGCATGTATGAATGGGTGCTGTGTGTAACTGCTGCATTAAAATCAGAAATGAAGCTTCGGAAGTGTATTTTGTGATGGGCTTATACTGAAAACAGGGATATTCACTTCTGCAATTTATGCTGACGATTGTCTTTTTGAAGATCCAACCATCAGATTTCGAGGTATTAATTATCACAGAAACTTTTAATAACTAAACCGTATAGTCCTCCATCACAATGGTTATTTTCACCTCTTATGTTAGCCCAAGATTTTATTAACCTAAAATTAGAAGGCATATATTGTTTCTTATTCTGCTAAAGTGGTGAATGGTGATGAATCACTTTAAACAGCAGAGACTGAACTAAATATTAGATTGAAAAACACTTTTGATCGCTTCATTGAAGTAATGATTTAGTCCCTCATTTTTAAAACATGACAATTTAATCTTTGTACTCTCTAACTTATAAAATTTTTGTCTTTAGTCGTTAGCATGTAACAATTTAGTTCTTAGTCCATATTGTGAAAAATCTTGTCAAAATGAAATGTCAATTTTTATTATGAAATGAATTAGTTTTGTAGTCTATAAAGACATTTTACTTTAATAGAATACTTCACTTTAGCAATCTTTTCCAACATTAAAGTTGCTTTATGGACATTTAACCCTATAGGTAAGGAGCTGTATTCACGAAACTTAAAGTTACTTGTTCCCTTTTTTGACTGTCCATCGATCCAATTACAAACAATCAATAAGGTAATTTGATCTTGTGATTTAATCCTTCTTTTGACGTAGATTGATGAGTAAATGGACTGAGTTAATACCTTCTTCGTCCTTTTAGCTAAGACCAATAGCTAGTGGATGCAGCTGGGATCGGATTGGGAAAAAATCTTAAAACTTTCAACCTGCTGTTTTTATGCTGTCTTCGGAGGCAAATTTTTTTTAACTTTTGGTAAATCTAGGATGTAAATGGCTGCTAAGGGACGAGTGAGTACTGAGTAGCATGTTCTTCATGGATAAAATGTTTAGTCTTTCCAAAGAATGTATTTCTTCTTGGTTAAATTACAAGTCTCTTTAAACTTTGAGGTTTATGCATGTCTATTTGGTCACTGAACTATTAAAAGTGTCTAATAGGTTCCTAAACTTTCAATTTTGTATCTAATAGATTTCTGGCAATATTAAAAAATTTTAAAAATTAATTGATATATTAGTTATAAATTTGAATTTTATATCTAATCAAACTCTAAACTTTCAATTTTTGTGCTAAAAAGTCTCAATTTATCTCTTTTATGGCTTTAAATATTAGCAAGTCATTCTTAGTATGGGAGAGATAAACACCAAATAAATTGTTCTTGGAAAATTGATCTTTGTCTGCTGCACGTCCAGCATCTTCAACTCTAACTCTGAAACTTGTGTTTCAGACTCTCTGTTTATTCCATAGAAGACTTTTGCTGATTTTCATGATATACATGATTACAGAGTAACAAATCTGGAGTTGAATTTGTGCTGGCAGCCTGGAAACTAAGGTAGTTAATAAAATCTAGTCTCTTATTTGCATTAATTCAGATCCTGGTCGAACTACATTCTTTTGAATTACTTTCTGACTTTGAGGTTTTTCCTTGTGTGAATTCCAAAAGAATATTGGTATTTTTCTCAATAAAACAAAAGAAGTAGGAAACAAAAGTTGAAACATAAATGGTAGGTTAAATTATAAATTTGGTCTATGAACTTTTAGCTTTGTGTCTATTTGGTCCTTCAACTTTCAAAAGTATCTAAAAGGTTCCTAAACTTTTAATTTTACATATAATAGGCTCCGTACTTTAAAATAGTTAGCAAATTCGTGAACATTCAATTTTGTGTCTAATAGGTTCTTAACATATTCAAAAGAATTTAAAATTAATTGATCTATTAGATTTATATTTGAATTTGCACTCTTAACCTTCAATTTTGTATCTAATAGATGTGGGAATTGTGAAAAAACATCAAATAGCTCGACTTACTAGACACAAAATTGAAAATTCTAAAACCTATTGGACACATTATTGAAAGTTTAAGTACTTATTGGACACATAATTGAAAGTTTAAGTACCTGTTGGACACTTTTCGAAAGTTCAAGGATCTATTGGACACAAAATTGAAAGTTGAGAGACCTATTACACTTTTTAAAGTGTAGAGACCAAATAGATACGAAGCTGAAAGTTTAGGGACTAAACTTGTAATTTAATCTAACCGGTAGATATGCCATGTAACTTGCAATTGCATTGGTTCTTTCTGTTGGTATTTTCAAGCATCTTTTTCCTCATTTCCTTTTCAATTGCTGGACCGCTTTCCCACATTGGTAGAATTCTCGATATTTATTCTTTTCATTGATTGCCTTGCAGGACATACCTGAAACTTCCATGGAGGCCACTCATTTCTATTGATGGAAGTACACTCTATGAACTTGATGAAAAGTTGAAAGTGAGATTCAGTGATCCTCTCAACTGTGTTTTCATTTTTCAAAGTGGTTTTTAG

mRNA sequence

ATGGCCGGAATCTGTTACTGTCCACCGCTTCCTCCATCTCTATCCCCCAAGACGGTATCCGCCATAAGATGCTTCTCAAGCTCGCAGGAGAATTATAACGGTAGCCGGAAGAAAGAGGCATCTGCGATTGTGAAAATCGCCGTGAGTGGAGTCACAGAGCTTCTTAGGCTTTTCTCCTCTCCGATCAGTAAGAGAGTTGATGGAGTTGGGGATAATCAGGGAGAGGAGTTTGTAGTTACAGACGTTGATGAGATTCTAAATATCTTGAAATCAGATTATGAGAATGCTTACTTTGTTACTGGGATATTCACTTCTGCAATTTATGCTGACGATTGTCTTTTTGAAGATCCAACCATCAGATTTCGAGGTAAGGAGCTGTATTCACGAAACTTAAAGTTACTTGTTCCCTTTTTTGACTGTCCATCGATCCAATTACAAACAATCAATAAGAGTAACAAATCTGGAGTTGAATTTGTGCTGGCAGCCTGGAAACTAAGGACATACCTGAAACTTCCATGGAGGCCACTCATTTCTATTGATGGAAGTACACTCTATGAACTTGATGAAAAGTTGAAAGTGAGATTCAGTGATCCTCTCAACTGTGTTTTCATTTTTCAAAGTGGTTTTTAG

Coding sequence (CDS)

ATGGCCGGAATCTGTTACTGTCCACCGCTTCCTCCATCTCTATCCCCCAAGACGGTATCCGCCATAAGATGCTTCTCAAGCTCGCAGGAGAATTATAACGGTAGCCGGAAGAAAGAGGCATCTGCGATTGTGAAAATCGCCGTGAGTGGAGTCACAGAGCTTCTTAGGCTTTTCTCCTCTCCGATCAGTAAGAGAGTTGATGGAGTTGGGGATAATCAGGGAGAGGAGTTTGTAGTTACAGACGTTGATGAGATTCTAAATATCTTGAAATCAGATTATGAGAATGCTTACTTTGTTACTGGGATATTCACTTCTGCAATTTATGCTGACGATTGTCTTTTTGAAGATCCAACCATCAGATTTCGAGGTAAGGAGCTGTATTCACGAAACTTAAAGTTACTTGTTCCCTTTTTTGACTGTCCATCGATCCAATTACAAACAATCAATAAGAGTAACAAATCTGGAGTTGAATTTGTGCTGGCAGCCTGGAAACTAAGGACATACCTGAAACTTCCATGGAGGCCACTCATTTCTATTGATGGAAGTACACTCTATGAACTTGATGAAAAGTTGAAAGTGAGATTCAGTGATCCTCTCAACTGTGTTTTCATTTTTCAAAGTGGTTTTTAG

Protein sequence

MAGICYCPPLPPSLSPKTVSAIRCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFSSPISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISIDGSTLYELDEKLKVRFSDPLNCVFIFQSGF

Homology

[Close]

BLAST of HG10006504 vs. NCBI nr
Match: XP_023545588.1 (uncharacterized protein LOC111804973 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367.9 bits (943), Expect = 6.0e-98
Identity = 179/193 (92.75%), Postives = 186/193 (96.37%), Query Frame = 0


Query: 1   MAGICYCPPLPPSLSPKTVSAIRCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFSS 60
           M GICYCPPLPPSLSPK V+AIRCFSSS EN NGSR+KEASAIVKIAVSGVTELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNGSRRKEASAIVKIAVSGVTELLRLFSS 60

Query: 61  PISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120
           PISKRVDGVGDNQGEEFVV  +D++LNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTINK NKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEKLKV 194
           GSTLYELDE+LK+
Sbjct: 181 GSTLYELDEELKI 193

[Close]

BLAST of HG10006504 vs. NCBI nr
Match: XP_022999247.1 (uncharacterized protein LOC111493675 [Cucurbita maxima])

HSP 1 Score: 365.5 bits (937), Expect = 3.0e-97
Identity = 178/193 (92.23%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MAGICYCPPLPPSLSPKTVSAIRCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFSS 60
           M GICYCPPLPPSLSPK V+AIRCFSSS EN NGSRKKEASAIVKIAVSG TELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNGSRKKEASAIVKIAVSGATELLRLFSS 60

Query: 61  PISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120
           PISKRV+GVGDNQGEEFVV  +D++LNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVNGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTINK NKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEKLKV 194
           GSTLYELDE+LK+
Sbjct: 181 GSTLYELDEELKI 193

[Close]

BLAST of HG10006504 vs. NCBI nr
Match: XP_022946926.1 (uncharacterized protein LOC111450860 [Cucurbita moschata])

HSP 1 Score: 364.8 bits (935), Expect = 5.1e-97
Identity = 178/193 (92.23%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MAGICYCPPLPPSLSPKTVSAIRCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFSS 60
           M GICYCPPLPPSLSPK V+AIRCFSSS EN N SRKKEASAIVKIAVSGVTELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNSSRKKEASAIVKIAVSGVTELLRLFSS 60

Query: 61  PISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120
           PISKRVDGVGDNQGEEFVV  +D++LNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTI+K NKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTIDKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEKLKV 194
           GSTLYELDE+LK+
Sbjct: 181 GSTLYELDEELKI 193

[Close]

BLAST of HG10006504 vs. NCBI nr
Match: KAG6599294.1 (hypothetical protein SDJN03_09072, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364.0 bits (933), Expect = 8.7e-97
Identity = 178/193 (92.23%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MAGICYCPPLPPSLSPKTVSAIRCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFSS 60
           M GICYCPPLPPSLSPK V+AIRCFSSS EN N SRKKEASAIVKIAVSGVTELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNSSRKKEASAIVKIAVSGVTELLRLFSS 60

Query: 61  PISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120
           PISKRVDGVGDNQGEEFVV  +D++LNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGMDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTI+K NKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTIDKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEKLKV 194
           GSTLYELDE+LK+
Sbjct: 181 GSTLYELDEELKI 193

[Close]

BLAST of HG10006504 vs. NCBI nr
Match: XP_004139222.1 (uncharacterized protein LOC101220191 isoform X1 [Cucumis sativus] >KGN60827.1 hypothetical protein Csa_019272 [Cucumis sativus])

HSP 1 Score: 363.6 bits (932), Expect = 1.1e-96
Identity = 177/193 (91.71%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MAGICYCPPLPPSLSPKTVSAIRCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFSS 60
           MAGICYCPPLPPSLSPKTVS IRCFSSS EN NGSRKKEASAIVKI VSG+TELLRLFSS
Sbjct: 1   MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSS 60

Query: 61  PISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120
           PISKRVD + DNQGEEFVVT VDE++NILKSDYENAYFVTGIFTSAIY DDCLFEDPTIR
Sbjct: 61  PISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEKLKV 194
           G+TLYELDE+ K+
Sbjct: 181 GNTLYELDEEFKI 193

[Close]

BLAST of HG10006504 vs. ExPASy TrEMBL
Match: A0A6J1KAD4 (uncharacterized protein LOC111493675 OS=Cucurbita maxima OX=3661 GN=LOC111493675 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97
Identity = 178/193 (92.23%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MAGICYCPPLPPSLSPKTVSAIRCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFSS 60
           M GICYCPPLPPSLSPK V+AIRCFSSS EN NGSRKKEASAIVKIAVSG TELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNGSRKKEASAIVKIAVSGATELLRLFSS 60

Query: 61  PISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120
           PISKRV+GVGDNQGEEFVV  +D++LNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVNGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTINK NKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEKLKV 194
           GSTLYELDE+LK+
Sbjct: 181 GSTLYELDEELKI 193

[Close]

BLAST of HG10006504 vs. ExPASy TrEMBL
Match: A0A6J1G4Y1 (uncharacterized protein LOC111450860 OS=Cucurbita moschata OX=3662 GN=LOC111450860 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.5e-97
Identity = 178/193 (92.23%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MAGICYCPPLPPSLSPKTVSAIRCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFSS 60
           M GICYCPPLPPSLSPK V+AIRCFSSS EN N SRKKEASAIVKIAVSGVTELLRLFSS
Sbjct: 1   MTGICYCPPLPPSLSPKMVTAIRCFSSSPENSNSSRKKEASAIVKIAVSGVTELLRLFSS 60

Query: 61  PISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120
           PISKRVDGVGDNQGEEFVV  +D++LNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR
Sbjct: 61  PISKRVDGVGDNQGEEFVVAGIDDVLNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTI+K NKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTIDKGNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEKLKV 194
           GSTLYELDE+LK+
Sbjct: 181 GSTLYELDEELKI 193

[Close]

BLAST of HG10006504 vs. ExPASy TrEMBL
Match: A0A0A0LJD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011600 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.5e-97
Identity = 177/193 (91.71%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MAGICYCPPLPPSLSPKTVSAIRCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFSS 60
           MAGICYCPPLPPSLSPKTVS IRCFSSS EN NGSRKKEASAIVKI VSG+TELLRLFSS
Sbjct: 1   MAGICYCPPLPPSLSPKTVSVIRCFSSSPENSNGSRKKEASAIVKITVSGITELLRLFSS 60

Query: 61  PISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120
           PISKRVD + DNQGEEFVVT VDE++NILKSDYENAYFVTGIFTSAIY DDCLFEDPTIR
Sbjct: 61  PISKRVDEIRDNQGEEFVVTGVDEVVNILKSDYENAYFVTGIFTSAIYTDDCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180
           FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEKLKV 194
           G+TLYELDE+ K+
Sbjct: 181 GNTLYELDEEFKI 193

[Close]

BLAST of HG10006504 vs. ExPASy TrEMBL
Match: A0A1S3C2Z9 (uncharacterized protein LOC103495870 OS=Cucumis melo OX=3656 GN=LOC103495870 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.3e-92
Identity = 169/193 (87.56%), Postives = 180/193 (93.26%), Query Frame = 0


Query: 1   MAGICYCPPLPPSLSPKTVSAIRCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFSS 60
           MAGI YCPPLPPSLSPKTVSAIRC SSS EN NGSRKKEAS I+KI VSG+TELLRLFSS
Sbjct: 1   MAGISYCPPLPPSLSPKTVSAIRCLSSSPENSNGSRKKEASTILKITVSGITELLRLFSS 60

Query: 61  PISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIR 120
           PISKRVDG+ DNQ EEFVVT VDE+++ILKSDYENAYFVTG FTSAIY D CLFEDPTIR
Sbjct: 61  PISKRVDGIRDNQEEEFVVTGVDEVVDILKSDYENAYFVTGTFTSAIYTDHCLFEDPTIR 120

Query: 121 FRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180
           FRGKELYSRNLKLLVPFFDCPSIQL+TINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID
Sbjct: 121 FRGKELYSRNLKLLVPFFDCPSIQLKTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISID 180

Query: 181 GSTLYELDEKLKV 194
           G+TLYELD++ K+
Sbjct: 181 GNTLYELDDEFKI 193

[Close]

BLAST of HG10006504 vs. ExPASy TrEMBL
Match: A0A6J1CMH1 (uncharacterized protein LOC111012984 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111012984 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 7.2e-81
Identity = 160/217 (73.73%), Postives = 172/217 (79.26%), Query Frame = 0


Query: 1   MAGICYCPPLPPSLSPKTVSAIRCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFSS 60
           MAGIC  PPLP SLSPKT   +RCFSSS +N  G RKKEAS IVKIAVSGVTELLRLFSS
Sbjct: 34  MAGICCSPPLPSSLSPKTKYDVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSS 93

Query: 61  P------------------------ISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENA 120
                                    +S R DGVGDNQ EEFVV  VD++L+ILKSDY+NA
Sbjct: 94  SKSSTPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEEFVVAGVDDVLDILKSDYKNA 153

Query: 121 YFVTGIFTSAIYADDCLFEDPTIRFRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGV 180
           YFVTGIFTS IYADDCLFEDPTI+FRGKELYSRNLKLLVPFFDCPSIQLQ INK NKSGV
Sbjct: 154 YFVTGIFTSEIYADDCLFEDPTIKFRGKELYSRNLKLLVPFFDCPSIQLQKINKGNKSGV 213

Query: 181 EFVLAAWKLRTYLKLPWRPLISIDGSTLYELDEKLKV 194
           EFV+AAWKLRTYLKLPWRPLI+I GSTLYELDE+LK+
Sbjct: 214 EFVVAAWKLRTYLKLPWRPLITIHGSTLYELDEELKI 250

[Close]

BLAST of HG10006504 vs. TAIR 10
Match: AT3G04890.1 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-50
Identity = 98/172 (56.98%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 23  RCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFS-SPISKRVDGVGDNQGEEFVVTD 82
           RCFS       GS +K+  A++K AVSGVTE LRL S +P S  +    D    E    D
Sbjct: 24  RCFS-------GSPEKKTPAVLKWAVSGVTEFLRLISGAPSSTSIATNKDRSKNEVTAGD 83

Query: 83  VDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIRFRGKELYSRNLKLLVPFFDCP 142
           VD+++ IL+SDY N YFVTG+ TSAIY+DDC+FEDPTI F+G ELY RNLKLLVPF +  
Sbjct: 84  VDDVMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDA 143

Query: 143 SIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISIDGSTLYELDEKLKV 194
           SI+LQ + KS  S   ++LA WKLRTYLKLPWRPLISI+G+T+Y+LD+  K+
Sbjct: 144 SIELQNMEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVYDLDKDFKI 188

[Close]

BLAST of HG10006504 vs. TAIR 10
Match: AT3G04890.2 (Uncharacterized conserved protein (DUF2358) )

HSP 1 Score: 195.7 bits (496), Expect = 3.8e-50
Identity = 98/171 (57.31%), Postives = 122/171 (71.35%), Query Frame = 0


Query: 23  RCFSSSQENYNGSRKKEASAIVKIAVSGVTELLRLFS-SPISKRVDGVGDNQGEEFVVTD 82
           RCFS       GS +K+  A++K AVSGVTE LRL S +P S  +    D    E    D
Sbjct: 24  RCFS-------GSPEKKTPAVLKWAVSGVTEFLRLISGAPSSTSIATNKDRSKNEVTAGD 83

Query: 83  VDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPTIRFRGKELYSRNLKLLVPFFDCP 142
           VD+++ IL+SDY N YFVTG+ TSAIY+DDC+FEDPTI F+G ELY RNLKLLVPF +  
Sbjct: 84  VDDVMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDA 143

Query: 143 SIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLISIDGSTLYELDEKLK 193
           SI+LQ + KS  S   ++LA WKLRTYLKLPWRPLISI+G+T+Y+LD+  K
Sbjct: 144 SIELQNMEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVYDLDKDFK 187

[Close]

BLAST of HG10006504 vs. TAIR 10
Match: AT2G46100.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 65.9 bits (159), Expect = 4.5e-11
Identity = 38/130 (29.23%), Postives = 56/130 (43.08%), Query Frame = 0


Query: 59  SSPISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPT 118
           +SPI    +   D  G    V  VD I    K D++ +YFVTG  T  +Y + C F DP 
Sbjct: 83  TSPIVTGFEVPVDCSGRAVRVAVVDSI----KQDFKRSYFVTGNLTPEVYEEKCEFADPA 142

Query: 119 IRFRGKELYSRNLKLLVPFFDCPSIQLQTINKSNKSGVEFVLAAWKLRTYLKLPWRPLIS 178
             F+G   + RN        +  +++L         G+      WK    +  PW+P++S
Sbjct: 143 GSFKGLARFKRNCTNFGSLIEKSNMKLMKWENFEDKGI----GHWKFSCVMSFPWKPILS 202

Query: 179 IDGSTLYELD 189
             G T Y  D
Sbjct: 203 ATGYTEYYFD 204

[Close]

BLAST of HG10006504 vs. TAIR 10
Match: AT2G46100.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 45.8 bits (107), Expect = 4.9e-05
Identity = 26/72 (36.11%), Postives = 35/72 (48.61%), Query Frame = 0


Query: 59  SSPISKRVDGVGDNQGEEFVVTDVDEILNILKSDYENAYFVTGIFTSAIYADDCLFEDPT 118
           +SPI    +   D  G    V  VD I    K D++ +YFVTG  T  +Y + C F DP 
Sbjct: 83  TSPIVTGFEVPVDCSGRAVRVAVVDSI----KQDFKRSYFVTGNLTPEVYEEKCEFADPA 142

Query: 119 IRFRGKELYSRN 131
             F+G   + RN
Sbjct: 143 GSFKGLARFKRN 150

The following BLAST results are available for this feature:

BLAST of HG10006504 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545588.1	6.0e-98	92.75	uncharacterized protein LOC111804973 [Cucurbita pepo subsp. pepo]	[more]
XP_022999247.1	3.0e-97	92.23	uncharacterized protein LOC111493675 [Cucurbita maxima]	[more]
XP_022946926.1	5.1e-97	92.23	uncharacterized protein LOC111450860 [Cucurbita moschata]	[more]
KAG6599294.1	8.7e-97	92.23	hypothetical protein SDJN03_09072, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004139222.1	1.1e-96	91.71	uncharacterized protein LOC101220191 isoform X1 [Cucumis sativus] >KGN60827.1 hy...	[more]

BLAST of HG10006504 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10006504 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KAD4	1.4e-97	92.23	uncharacterized protein LOC111493675 OS=Cucurbita maxima OX=3661 GN=LOC111493675...	[more]
A0A6J1G4Y1	2.5e-97	92.23	uncharacterized protein LOC111450860 OS=Cucurbita moschata OX=3662 GN=LOC1114508...	[more]
A0A0A0LJD8	5.5e-97	91.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011600 PE=4 SV=1	[more]
A0A1S3C2Z9	5.3e-92	87.56	uncharacterized protein LOC103495870 OS=Cucumis melo OX=3656 GN=LOC103495870 PE=...	[more]
A0A6J1CMH1	7.2e-81	73.73	uncharacterized protein LOC111012984 isoform X5 OS=Momordica charantia OX=3673 G...	[more]

BLAST of HG10006504 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04890.1	1.7e-50	56.98	Uncharacterized conserved protein (DUF2358)	[more]
AT3G04890.2	3.8e-50	57.31	Uncharacterized conserved protein (DUF2358)	[more]
AT2G46100.1	4.5e-11	29.23	Nuclear transport factor 2 (NTF2) family protein	[more]
AT2G46100.2	4.9e-05	36.11	Nuclear transport factor 2 (NTF2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018790	Protein of unknown function DUF2358	PFAM	PF10184	DUF2358	coord: 84..193 e-value: 3.2E-20 score: 72.5
None	No IPR available	PANTHER	PTHR34123:SF4	PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN, PUTATIVE (DUF2358)-RELATED	coord: 13..195
None	No IPR available	PANTHER	PTHR34123	FAMILY NOT NAMED	coord: 13..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006504.1	HG10006504.1	mRNA