HG10006450 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006450
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-type domain-containing protein
Location	Chr07: 18678957 .. 18680102 (-)
RNA-Seq Expression	HG10006450
Synteny	HG10006450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCTCTCACCGCCGCCCATGGCGCTCTCTTCTTCTTCTCCCTCCTCTTCTTCTCCGTCTCCGCCCAGTCCCAACTCCCCCCCGACCCCAGATCCGACCCTTACCAGTACCGCCTCAGCGGCTCCATGGCTGTCATCATCGTTATCCTCATCGCTGCTCTCTTCTTCATGGCTTTCTTCTCCGTCTACATCCGCCACTGCAACGATTCACAATCCAACACCGTCCGCCCTATCTCCACCGCCGCCGCCCGCTCCCGTCGCGCTACTCGCGGCCTCGATCCGGCTGTAATCGAAACATTTCCGACTCTAATTTACTCCGATGTGAAACAGCACAAAATTGGTAAAAGTGCCCTAGAATGCGCCGTTTGCTTGAATGAATTTGAAGATGATGAAACGCTGCGTTTAATCCCCAAGTGTGACCATGTGTTTCACCCTGAGTGTATTGACGCTTGGTTGGCTTCTCACTCTACTTGCCCTGTTTGTCGAGCTAATTTGTCTCCTCAACTCACTGAGTCCGTCCACCGAGTTGACGATTCCAACGCCGTGGTCAACTCGGACACTGACGGAGGAGATATTGAAGCTCAGCCCCACGACGTCGTTTCCGAGACCAATTTACCAACGATGGCTCCACCCTCAGTTCAGATACAAACGGAATCGGAGTTCAATACGACGACGGGCAACAAGACATTGAATCGGACACGTACACGTGGATCCCGATCCAACAGATTGCGGTGGCTATTCCCCCGGTCTCACTCGACCGGGCACTCTTTGGTCCAGCCTGGGGAGGACACCGAGCGGTTTACTCTCCGATTACCAGTTGAGATAAGGAAGCAAGTGGTGAACCGGAAGCTGAACCGGGCGACGAGTATGGTGGTTTTGGCAAGGCAGAGCAGCTCGATGAGAGGATACCGGTTCGGTTCAGGTGAAGGGAGTAGTCGAGGGAAGTATTACCGGAGGCTCGAGCGGTTGGACCGGACATCAAAGTCGGACCGGTGGGTGTTGTCAATTACACCGCCGTTTTTTACACGTATGTCGTCGATGAAGACTCCCCGGAGCGGAGGAAGTAACCATGGTGAATCCGGTTCGAGCCGAGAACTTGGACAGGGGAATTCTACCGTCGATTCAAGTAGGCTTCCGGTCTGA

mRNA sequence

ATGTCCTCTCTCACCGCCGCCCATGGCGCTCTCTTCTTCTTCTCCCTCCTCTTCTTCTCCGTCTCCGCCCAGTCCCAACTCCCCCCCGACCCCAGATCCGACCCTTACCAGTACCGCCTCAGCGGCTCCATGGCTGTCATCATCGTTATCCTCATCGCTGCTCTCTTCTTCATGGCTTTCTTCTCCGTCTACATCCGCCACTGCAACGATTCACAATCCAACACCGTCCGCCCTATCTCCACCGCCGCCGCCCGCTCCCGTCGCGCTACTCGCGGCCTCGATCCGGCTGTAATCGAAACATTTCCGACTCTAATTTACTCCGATGTGAAACAGCACAAAATTGGTAAAAGTGCCCTAGAATGCGCCGTTTGCTTGAATGAATTTGAAGATGATGAAACGCTGCGTTTAATCCCCAAGTGTGACCATGTGTTTCACCCTGAGTGTATTGACGCTTGGTTGGCTTCTCACTCTACTTGCCCTGTTTGTCGAGCTAATTTGTCTCCTCAACTCACTGAGTCCGTCCACCGAGTTGACGATTCCAACGCCGTGGTCAACTCGGACACTGACGGAGGAGATATTGAAGCTCAGCCCCACGACGTCGTTTCCGAGACCAATTTACCAACGATGGCTCCACCCTCAGTTCAGATACAAACGGAATCGGAGTTCAATACGACGACGGGCAACAAGACATTGAATCGGACACGTACACGTGGATCCCGATCCAACAGATTGCGGTGGCTATTCCCCCGGTCTCACTCGACCGGGCACTCTTTGGTCCAGCCTGGGGAGGACACCGAGCGGTTTACTCTCCGATTACCAGTTGAGATAAGGAAGCAAGTGGTGAACCGGAAGCTGAACCGGGCGACGAGTATGGTGGTTTTGGCAAGGCAGAGCAGCTCGATGAGAGGATACCGGTTCGGTTCAGGTGAAGGGAGTAGTCGAGGGAAGTATTACCGGAGGCTCGAGCGGTTGGACCGGACATCAAAGTCGGACCGGTGGGTGTTGTCAATTACACCGCCGTTTTTTACACGTATGTCGTCGATGAAGACTCCCCGGAGCGGAGGAAGTAACCATGGTGAATCCGGTTCGAGCCGAGAACTTGGACAGGGGAATTCTACCGTCGATTCAAGTAGGCTTCCGGTCTGA

Coding sequence (CDS)

ATGTCCTCTCTCACCGCCGCCCATGGCGCTCTCTTCTTCTTCTCCCTCCTCTTCTTCTCCGTCTCCGCCCAGTCCCAACTCCCCCCCGACCCCAGATCCGACCCTTACCAGTACCGCCTCAGCGGCTCCATGGCTGTCATCATCGTTATCCTCATCGCTGCTCTCTTCTTCATGGCTTTCTTCTCCGTCTACATCCGCCACTGCAACGATTCACAATCCAACACCGTCCGCCCTATCTCCACCGCCGCCGCCCGCTCCCGTCGCGCTACTCGCGGCCTCGATCCGGCTGTAATCGAAACATTTCCGACTCTAATTTACTCCGATGTGAAACAGCACAAAATTGGTAAAAGTGCCCTAGAATGCGCCGTTTGCTTGAATGAATTTGAAGATGATGAAACGCTGCGTTTAATCCCCAAGTGTGACCATGTGTTTCACCCTGAGTGTATTGACGCTTGGTTGGCTTCTCACTCTACTTGCCCTGTTTGTCGAGCTAATTTGTCTCCTCAACTCACTGAGTCCGTCCACCGAGTTGACGATTCCAACGCCGTGGTCAACTCGGACACTGACGGAGGAGATATTGAAGCTCAGCCCCACGACGTCGTTTCCGAGACCAATTTACCAACGATGGCTCCACCCTCAGTTCAGATACAAACGGAATCGGAGTTCAATACGACGACGGGCAACAAGACATTGAATCGGACACGTACACGTGGATCCCGATCCAACAGATTGCGGTGGCTATTCCCCCGGTCTCACTCGACCGGGCACTCTTTGGTCCAGCCTGGGGAGGACACCGAGCGGTTTACTCTCCGATTACCAGTTGAGATAAGGAAGCAAGTGGTGAACCGGAAGCTGAACCGGGCGACGAGTATGGTGGTTTTGGCAAGGCAGAGCAGCTCGATGAGAGGATACCGGTTCGGTTCAGGTGAAGGGAGTAGTCGAGGGAAGTATTACCGGAGGCTCGAGCGGTTGGACCGGACATCAAAGTCGGACCGGTGGGTGTTGTCAATTACACCGCCGTTTTTTACACGTATGTCGTCGATGAAGACTCCCCGGAGCGGAGGAAGTAACCATGGTGAATCCGGTTCGAGCCGAGAACTTGGACAGGGGAATTCTACCGTCGATTCAAGTAGGCTTCCGGTCTGA

Protein sequence

MSSLTAAHGALFFFSLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFFMAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKQHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRSGGSNHGESGSSRELGQGNSTVDSSRLPV

Homology

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BLAST of HG10006450 vs. NCBI nr
Match: XP_038888961.1 (E3 ubiquitin-protein ligase ATL6-like [Benincasa hispida])

HSP 1 Score: 667.2 bits (1720), Expect = 8.7e-188
Identity = 349/381 (91.60%), Postives = 354/381 (92.91%), Query Frame = 0


Query: 1   MSSLTAAHGALFFFSLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFFMAF 60
           MSS TA HG LFFF LLFFS SAQ+QL PDPRSDPYQYRLSGSMAVIIVILIAALFFMAF
Sbjct: 1   MSSFTAVHGPLFFFLLLFFSASAQTQLSPDPRSDPYQYRLSGSMAVIIVILIAALFFMAF 60

Query: 61  FSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKQHKIGKSALE 120
           FSVYIRHCNDSQSNTVRPIS AAARSRRATRGLDPAVIETFPTL+YSDVK+HKIGKSALE
Sbjct: 61  FSVYIRHCNDSQSNTVRPISNAAARSRRATRGLDPAVIETFPTLVYSDVKEHKIGKSALE 120

Query: 121 CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDS 180
           CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV DS
Sbjct: 121 CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVGDS 180

Query: 181 NAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTRGSR 240
           NAVVN D+DGGDIEA  +DVVSET     APP VQI TESE      NK LNRTRTRGSR
Sbjct: 181 NAVVNPDSDGGDIEAPSNDVVSETT----APPPVQIPTESEL----PNKALNRTRTRGSR 240

Query: 241 SNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQSSS 300
           SNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQSSS
Sbjct: 241 SNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQSSS 300

Query: 301 MRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRSGGSNHGE 360
           MRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPR GGSNHGE
Sbjct: 301 MRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPR-GGSNHGE 360

Query: 361 SGSSRELGQGNSTVDSSRLPV 382
           SGS RELGQGNSTVDSSRLPV
Sbjct: 361 SGSGRELGQGNSTVDSSRLPV 372

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BLAST of HG10006450 vs. NCBI nr
Match: XP_004139190.1 (E3 ubiquitin-protein ligase ATL6 [Cucumis sativus] >KAE8651591.1 hypothetical protein Csa_023458 [Cucumis sativus])

HSP 1 Score: 654.8 bits (1688), Expect = 4.5e-184
Identity = 344/384 (89.58%), Postives = 351/384 (91.41%), Query Frame = 0


Query: 1   MSSLTAAHGA---LFFFSLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA HG    L  F  LF SVSAQSQ  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLLLFLFLFSSVSAQSQPSPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKQHKIGKS 120
           MAFFSVYIRHCNDSQSNT+RPI+ AA RSRRATRGLDPAVIETFPTLIYSDVK+HKIGKS
Sbjct: 61  MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180

Query: 181 DDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTR 240
           DDSNAVVNSDTDGGDIEAQ  DVV ET     APP+VQIQTESE  TTTGNK LNRTRTR
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSTDVVLETT----APPTVQIQTESELTTTTGNKALNRTRTR 240

Query: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRA SMVVLARQ
Sbjct: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQ 300

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRSGGSN 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPR GGSN
Sbjct: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPR-GGSN 360

Query: 361 HGESGSSRELGQGNSTVDSSRLPV 382
            GE GS RELGQGN+ V+SS LPV
Sbjct: 361 RGEPGSGRELGQGNTAVESSMLPV 379

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BLAST of HG10006450 vs. NCBI nr
Match: KAA0047946.1 (E3 ubiquitin-protein ligase ATL6 [Cucumis melo var. makuwa])

HSP 1 Score: 649.4 bits (1674), Expect = 1.9e-182
Identity = 343/384 (89.32%), Postives = 353/384 (91.93%), Query Frame = 0


Query: 1   MSSLTAAHG-ALFFFSLLFF--SVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA HG  LF F LLF   SVSAQ Q  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKQHKIGKS 120
           MAFFSVYIRHCNDS SNTVRPI+ AA RSRRATRGLDPAVIETFPTLIYSDVK+HKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQ T+SVHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 DDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTR 240
           DDSNAVVNSDTDGGDIEAQ +DVVSET     APP+VQIQTESE +TTT NK+LNRTRTR
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETT----APPTVQIQTESELSTTTSNKSLNRTRTR 240

Query: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKL+RATSMVVLARQ
Sbjct: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQ 300

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRSGGSN 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPR GGSN
Sbjct: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPR-GGSN 360

Query: 361 HGESGSSRELGQGNSTVDSSRLPV 382
             E GS RELGQGN+ VDSSRLPV
Sbjct: 361 RAEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of HG10006450 vs. NCBI nr
Match: XP_008454907.2 (PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis melo] >AAO45753.1 RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 649.0 bits (1673), Expect = 2.5e-182
Identity = 343/384 (89.32%), Postives = 352/384 (91.67%), Query Frame = 0


Query: 1   MSSLTAAHG-ALFFFSLLFF--SVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA HG  LF F LLF   SVSAQ Q  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKQHKIGKS 120
           MAFFSVYIRHCNDS SNTVRPI+ AA RSRRATRGLDPAVIETFPTLIYSDVK+HKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQ T+SVHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 DDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTR 240
           DDSNAVVNSDTDGGDIEAQ +DVVSET     APP+VQIQTESE +TTT NK LNRTRTR
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETT----APPTVQIQTESELSTTTSNKALNRTRTR 240

Query: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKL+RATSMVVLARQ
Sbjct: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQ 300

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRSGGSN 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPR GGSN
Sbjct: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPR-GGSN 360

Query: 361 HGESGSSRELGQGNSTVDSSRLPV 382
             E GS RELGQGN+ VDSSRLPV
Sbjct: 361 RAEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of HG10006450 vs. NCBI nr
Match: XP_023545580.1 (E3 ubiquitin-protein ligase ATL6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 635.6 bits (1638), Expect = 2.8e-178
Identity = 335/382 (87.70%), Postives = 351/382 (91.88%), Query Frame = 0


Query: 1   MSSLTAAHGALFFFSLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFFMAF 60
           M+S TA H ALFF  LL  SVSAQSQ  PDPRSDPYQYRLSGSMAVIIVILIAALFF+AF
Sbjct: 1   MASFTAVHAALFF--LLSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60

Query: 61  FSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKQHKIGKSALE 120
           FSVY+RHCNDSQSN+VRP+ TAAARSRRA RGLDPAVIETFPTLIYSDVKQHKIGKS LE
Sbjct: 61  FSVYLRHCNDSQSNSVRPV-TAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLE 120

Query: 121 CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDS 180
           CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASH+TCPVCRANLSPQLTESVHRV+DS
Sbjct: 121 CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDS 180

Query: 181 NAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTT-GNKTLNRTRTRGS 240
            AVV+SD + GDIEAQ +DVVSETN PT APP +QI  ESE NTTT  NK+LNR RTRGS
Sbjct: 181 AAVVDSDENRGDIEAQNNDVVSETN-PTAAPPPIQIPVESELNTTTAANKSLNRNRTRGS 240

Query: 241 RSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQSS 300
           RSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLP+EIRKQVVNRKLNRATSMV+LARQSS
Sbjct: 241 RSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSS 300

Query: 301 SMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRSGGSNHG 360
           SMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPR GGS HG
Sbjct: 301 SMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPR-GGSIHG 360

Query: 361 ESGSSRELGQGNSTVDSSRLPV 382
           E G  RELGQG+ST +SSRLPV
Sbjct: 361 EPGLGRELGQGSSTAESSRLPV 377

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BLAST of HG10006450 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 2.0e-70
Identity = 174/405 (42.96%), Postives = 216/405 (53.33%), Query Frame = 0


Query: 11  LFFFSLLFFSVSAQSQLPPDPRSDPYQY-RLSGSMAVIIVILIAALFFMAFFSVYIRHCN 70
           + F  +L  +  A SQ  P P + PY Y RLS +MAVI+VILIAALFFM FFS+Y RHC+
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 71  DSQSNTVRPISTAAARS--RRATRGLDPAVIETFPTLIYSDVKQHKIGKSALECAVCLNE 130
                 V P   A +R+    A RGLD +V+ETFPT +YSDVK  K+GK  LECA+CLNE
Sbjct: 75  GVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNE 134

Query: 131 FEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDSNAVVNSD 190
           FEDDETLRL+PKCDHVFHP CIDAWL +H TCPVCRANL+ Q+ E            + +
Sbjct: 135 FEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEG----------ESVE 194

Query: 191 TDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTRGSRSNRLRWL 250
             G + + +   VV        AP   Q+ T            ++  R  G   +  R  
Sbjct: 195 PGGTEPDLELQQVVVNPEPVVTAPVPEQLVTSE----------VDSRRLPGVPVDLKRVK 254

Query: 251 FPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVV-NRKLNRATSMVVLARQSSSMRG--- 310
           F RSH+TGHS+VQPGE TERFTLRLP ++RK+++ + KLNR  S++VL R  SS RG   
Sbjct: 255 FSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRGKPI 314

Query: 311 ---------------------------YRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS 370
                                       R G+  GS R          D     DRW   
Sbjct: 315 DRSRARSDRWLFRKTPSFLWRSRDDGSIRLGA-TGSVRASAVPNSTGSDSVRAGDRWAFL 374

Query: 371 ITPPFFTRMSSMKTPRSGGSNHGESGSSRELGQGNSTVDSSRLPV 382
               F  R SS+  PR G +  GE  S +  G   ST  S RLPV
Sbjct: 375 RNASFLWRNSSVHVPRGGVNKDGEGTSVKSTGASGSTSGSVRLPV 398

[Close]

BLAST of HG10006450 vs. ExPASy Swiss-Prot
Match: Q8LGA5 (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2)

HSP 1 Score: 255.8 bits (652), Expect = 7.9e-67
Identity = 166/367 (45.23%), Postives = 202/367 (55.04%), Query Frame = 0


Query: 17  LFFSVSAQSQLPPDPRSDPYQY--RLSGSMAVIIVILIAALFFMAFFSVYIRHCNDSQSN 76
           L  SVSA     PD R DPY Y   LS +MAV++V++IAALFFM FF+VYIRHC  +   
Sbjct: 16  LLLSVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAVDG 75

Query: 77  TVRPISTAAARSRRAT--RGLDPAVIETFPTLIYSDVKQHKIGKSALECAVCLNEFEDDE 136
           +V P   A  R   AT  RGLD   IETFPT +YS+VK  KIGK ALECA+CLNEFEDDE
Sbjct: 76  SVTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDE 135

Query: 137 TLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDSNAVVNSDTDGGD 196
           TLRL+PKCDHVFHP CI AWL  H TCPVCR NL+ Q  E          VV +     D
Sbjct: 136 TLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPE-------PEVVVET-----D 195

Query: 197 IEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTRGSRSNRLRWLFPRSH 256
           +EAQ    V    +P +  P V+                                FPRSH
Sbjct: 196 LEAQQQSAVP---VPVVELPRVK--------------------------------FPRSH 255

Query: 257 STGHSLVQPGEDTERFTLRLPVEIRKQVV-NRKLNRATSMVVLARQSSSMRGYRFGSGEG 316
           +TGHS+V PGE T+RFTLR+P E+RK+++ N KLNR+ S+ VL R  SS  G        
Sbjct: 256 TTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRSG-------- 308

Query: 317 SSRGKYYRRLERLDRT-SKSDRWVLSITPPFFTRMSSMKTPRSGGSNHGESGSSRELGQG 376
                     +++DR+ +KSDRW+   TP F  R     + R GG     +GS R    G
Sbjct: 316 ----------KQVDRSRAKSDRWLFRKTPSFLWRNRDDGSIRLGG-----TGSVR----G 308

Query: 377 NSTVDSS 378
           NS    S
Sbjct: 376 NSVTSPS 308

[Close]

BLAST of HG10006450 vs. ExPASy Swiss-Prot
Match: Q84W40 (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 204.1 bits (518), Expect = 2.7e-51
Identity = 135/335 (40.30%), Postives = 182/335 (54.33%), Query Frame = 0


Query: 39  RLSGSMAVIIVILIAALFFMAFFSVYIRHCND----SQSNTVRPISTAAARSRRATRGLD 98
           R   +MA+++++L++  FF+ FFSVYIR C +                 A +R+  RGLD
Sbjct: 58  RFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLD 117

Query: 99  PAVIETFPTLIYSDVKQHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLA 158
            ++IETFPT  YS VK  +IGK ALEC+VCLNEFEDDETLRLIPKC HVFHP CIDAWL 
Sbjct: 118 ASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLR 177

Query: 159 SHSTCPVCRANLSPQLTESVHRVDDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSV 218
           SH+TCP+CRA+L P   ES+  +     V  +D  G D             + ++  P  
Sbjct: 178 SHTTCPLCRADLIPVPGESIVSIQIPGLV--NDPPGSDPNGD--------RIRSLGSPDA 237

Query: 219 QIQTESEFNTTTGNKTLNRTRTRGSRSN--RLRWLFPRSHSTGHSLVQPGEDTERFTLRL 278
           ++             T N++  R S S    L  +F  S  TG    Q  E+ +RFTLRL
Sbjct: 238 RLIESVAL-------TCNQSMPRRSMSTGWNLAGMFTNSDRTG----QHSENLDRFTLRL 297

Query: 279 PVEIRKQVVNRKLNRATSMVVLARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDR 338
           P +I  ++VN  L++    V L +  SS RGYR GS  GS R  +Y   ER D+  + DR
Sbjct: 298 PQDIHNKLVNPNLSKV--HVALPQVMSSTRGYRTGS-LGSERNYFY--YERFDQDGRLDR 357

Query: 339 WVLSITPPFFTRMSSMKTPRSGGSNHGESGSSREL 368
              SITPP+ T   +  +P   G +   + S + L
Sbjct: 358 RPFSITPPYRTSSINHMSPGGSGGDKVRASSPKSL 366

[Close]

BLAST of HG10006450 vs. ExPASy Swiss-Prot
Match: Q9SK92 (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-45
Identity = 137/368 (37.23%), Postives = 196/368 (53.26%), Query Frame = 0


Query: 13  FFSLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFFMAFFSVYIRHC---- 72
           F  LL   V A S+   + R+       S + A+I+++L++  F +   SVY+R C    
Sbjct: 13  FLLLLLEVVVASSEFDDEGRTS-----FSPTTAIIMIVLVSVFFALGCISVYMRRCLQHA 72

Query: 73  --NDSQSNTVRPISTAAARSRRATR-GLDPAVIETFPTLIYSDVKQHKIGKSALECAVCL 132
              DS       ++      R+ T  GLD +VIETFPT  YS VK  +IGK ALEC VCL
Sbjct: 73  LGMDSGGGPGNWLNV-----RQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCL 132

Query: 133 NEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDSNAVVN 192
           NEFEDDETLRLIP+C HVFHP CIDAWL S +TCP+CRANL P   ESV     S+ +  
Sbjct: 133 NEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESV-----SSEIPG 192

Query: 193 SDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTRGSRSNRLR 252
              + G  +      + +     +  P  ++     +   TGN+++ R      +S    
Sbjct: 193 LARETG--QNSLRTPIDDNRKRVLTSPDERLIDSVAW---TGNQSMPR------KSMSTG 252

Query: 253 WLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATS--MVVLARQSSSMRG 312
           W     +S   S  QP E+ +R+TLRLP EI  Q+VN  L +  S   + L ++ SS+RG
Sbjct: 253 WKLAELYSPASSPGQPEENLDRYTLRLPQEIHDQLVNSSLGKQGSKGQLALPQERSSVRG 312

Query: 313 YRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTP----RSGGSNHG 368
           +R GS  G+ +  +Y   ER D+  + DR   SITPP+ TR  S+++P     + G+   
Sbjct: 313 FRTGS-LGTEKNYFY--FERFDQDGRLDRRPFSITPPYHTR--SIQSPDEIINASGNYQD 349

[Close]

BLAST of HG10006450 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.0e-45
Identity = 143/369 (38.75%), Postives = 197/369 (53.39%), Query Frame = 0


Query: 2   SSLTAAHGALFFFSLLFFSV------SAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAAL 61
           SS    H  LF   LL            Q+  P   ++ P     +  + V+I +L   +
Sbjct: 8   SSRWIPHNLLFLLLLLLLQSVPYGFGQTQTTPPGTTKTKP-----NDPVVVVITVLFLVI 67

Query: 62  FFMAFFSVYIRHCND--SQSNTVRPISTAA----ARSRRAT-RGLDPAVIETFPTLIYSD 121
           FFM F S++ R  N   S+S+  R     A     R RR T RGLD   IETFPT +YS+
Sbjct: 68  FFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSE 127

Query: 122 VKQHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSP 181
           VK  +IGK  +ECAVCL EFEDDETLRL+P C HVFH +C+D WL+ HSTCP+CRA+   
Sbjct: 128 VKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRAD--- 187

Query: 182 QLTESVHRVDDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGN 241
            L  +    DD +    S TD G I +   D      L +     +   T S  N T   
Sbjct: 188 -LVLNQQGDDDDSTESYSGTDPGTISSST-DPERGMVLESSDAHLLDAVTWSNSNITP-- 247

Query: 242 KTLNRTRTRGSRSNRLRW-LFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNR 301
               R+++ G  S ++   LFPRSHSTGHSL+QP  + +RFTLRLP ++R+Q++  K +R
Sbjct: 248 ----RSKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLM--KTSR 307

Query: 302 ATSMVVLARQSSSMR-GYRFGSGEGSSRGKY-YRRLERLDRTSKSDRWVLSITPPFFTRM 355
               V L  Q+ S R GYR GS  GS R  + Y R     +++ ++R + S++  F  R 
Sbjct: 308 TMGHVALLPQARSSRSGYRSGS-VGSERSAFPYGR-----KSNNNNRRLHSLSFSFSFRS 352

[Close]

BLAST of HG10006450 vs. ExPASy TrEMBL
Match: A0A0A0LFQ4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021560 PE=4 SV=1)

HSP 1 Score: 654.8 bits (1688), Expect = 2.2e-184
Identity = 344/384 (89.58%), Postives = 351/384 (91.41%), Query Frame = 0


Query: 1   MSSLTAAHGA---LFFFSLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA HG    L  F  LF SVSAQSQ  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 97  MPSLTAPHGLPLFLLLFLFLFSSVSAQSQPSPDPRSDPYQYRLSGSMAVIIVILIAALFF 156

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKQHKIGKS 120
           MAFFSVYIRHCNDSQSNT+RPI+ AA RSRRATRGLDPAVIETFPTLIYSDVK+HKIGKS
Sbjct: 157 MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 216

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV
Sbjct: 217 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 276

Query: 181 DDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTR 240
           DDSNAVVNSDTDGGDIEAQ  DVV ET     APP+VQIQTESE  TTTGNK LNRTRTR
Sbjct: 277 DDSNAVVNSDTDGGDIEAQSTDVVLETT----APPTVQIQTESELTTTTGNKALNRTRTR 336

Query: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRA SMVVLARQ
Sbjct: 337 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQ 396

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRSGGSN 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPR GGSN
Sbjct: 397 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPR-GGSN 456

Query: 361 HGESGSSRELGQGNSTVDSSRLPV 382
            GE GS RELGQGN+ V+SS LPV
Sbjct: 457 RGEPGSGRELGQGNTAVESSMLPV 475

[Close]

BLAST of HG10006450 vs. ExPASy TrEMBL
Match: A0A5A7U133 (E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00060 PE=4 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 9.1e-183
Identity = 343/384 (89.32%), Postives = 353/384 (91.93%), Query Frame = 0


Query: 1   MSSLTAAHG-ALFFFSLLFF--SVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA HG  LF F LLF   SVSAQ Q  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKQHKIGKS 120
           MAFFSVYIRHCNDS SNTVRPI+ AA RSRRATRGLDPAVIETFPTLIYSDVK+HKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQ T+SVHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 DDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTR 240
           DDSNAVVNSDTDGGDIEAQ +DVVSET     APP+VQIQTESE +TTT NK+LNRTRTR
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETT----APPTVQIQTESELSTTTSNKSLNRTRTR 240

Query: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKL+RATSMVVLARQ
Sbjct: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQ 300

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRSGGSN 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPR GGSN
Sbjct: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPR-GGSN 360

Query: 361 HGESGSSRELGQGNSTVDSSRLPV 382
             E GS RELGQGN+ VDSSRLPV
Sbjct: 361 RAEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of HG10006450 vs. ExPASy TrEMBL
Match: Q84KA9 (RING/c3HC4/PHD zinc finger-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.2e-182
Identity = 343/384 (89.32%), Postives = 352/384 (91.67%), Query Frame = 0


Query: 1   MSSLTAAHG-ALFFFSLLFF--SVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA HG  LF F LLF   SVSAQ Q  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKQHKIGKS 120
           MAFFSVYIRHCNDS SNTVRPI+ AA RSRRATRGLDPAVIETFPTLIYSDVK+HKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQ T+SVHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 DDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTR 240
           DDSNAVVNSDTDGGDIEAQ +DVVSET     APP+VQIQTESE +TTT NK LNRTRTR
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETT----APPTVQIQTESELSTTTSNKALNRTRTR 240

Query: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKL+RATSMVVLARQ
Sbjct: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQ 300

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRSGGSN 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPR GGSN
Sbjct: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPR-GGSN 360

Query: 361 HGESGSSRELGQGNSTVDSSRLPV 382
             E GS RELGQGN+ VDSSRLPV
Sbjct: 361 RAEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of HG10006450 vs. ExPASy TrEMBL
Match: A0A1S3C0V4 (E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo OX=3656 GN=LOC103495208 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.2e-182
Identity = 343/384 (89.32%), Postives = 352/384 (91.67%), Query Frame = 0


Query: 1   MSSLTAAHG-ALFFFSLLFF--SVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA HG  LF F LLF   SVSAQ Q  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKQHKIGKS 120
           MAFFSVYIRHCNDS SNTVRPI+ AA RSRRATRGLDPAVIETFPTLIYSDVK+HKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQ T+SVHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 DDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTR 240
           DDSNAVVNSDTDGGDIEAQ +DVVSET     APP+VQIQTESE +TTT NK LNRTRTR
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETT----APPTVQIQTESELSTTTSNKALNRTRTR 240

Query: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKL+RATSMVVLARQ
Sbjct: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQ 300

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRSGGSN 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPR GGSN
Sbjct: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPR-GGSN 360

Query: 361 HGESGSSRELGQGNSTVDSSRLPV 382
             E GS RELGQGN+ VDSSRLPV
Sbjct: 361 RAEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of HG10006450 vs. ExPASy TrEMBL
Match: A0A6J1G3D2 (E3 ubiquitin-protein ligase ATL6-like OS=Cucurbita moschata OX=3662 GN=LOC111450413 PE=4 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 2.3e-178
Identity = 333/382 (87.17%), Postives = 349/382 (91.36%), Query Frame = 0


Query: 1   MSSLTAAHGALFFFSLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFFMAF 60
           M S TA H ALFF   +  SVSAQSQ  PDPRSDPYQYRLSGSMAVIIVILIAALFF+AF
Sbjct: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60

Query: 61  FSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKQHKIGKSALE 120
           FSVY+RHCNDSQSN+VRP+ TAAARSRRA RGLDPAVIETFPTLIYSDVKQHKIGKS LE
Sbjct: 61  FSVYLRHCNDSQSNSVRPV-TAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLE 120

Query: 121 CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDS 180
           CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASH+TCPVCRANLSPQLTESVHRV+DS
Sbjct: 121 CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDS 180

Query: 181 NAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTT-GNKTLNRTRTRGS 240
            AVV+SD + GDIEAQ +DVVSETN PT APP +QI  ESE NTTT  NK+LNR RTRGS
Sbjct: 181 AAVVDSDENRGDIEAQNNDVVSETN-PTAAPPPIQIPAESELNTTTAANKSLNRNRTRGS 240

Query: 241 RSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQSS 300
           RSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLP+EIRKQVVNRKLNRATSMV+LARQSS
Sbjct: 241 RSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSS 300

Query: 301 SMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRSGGSNHG 360
           SMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPR GGS HG
Sbjct: 301 SMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPR-GGSIHG 360

Query: 361 ESGSSRELGQGNSTVDSSRLPV 382
           E G  RELGQG+ST +SSRLPV
Sbjct: 361 EPGLGRELGQGSSTAESSRLPV 379

[Close]

BLAST of HG10006450 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 1.4e-71
Identity = 174/405 (42.96%), Postives = 216/405 (53.33%), Query Frame = 0


Query: 11  LFFFSLLFFSVSAQSQLPPDPRSDPYQY-RLSGSMAVIIVILIAALFFMAFFSVYIRHCN 70
           + F  +L  +  A SQ  P P + PY Y RLS +MAVI+VILIAALFFM FFS+Y RHC+
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 71  DSQSNTVRPISTAAARS--RRATRGLDPAVIETFPTLIYSDVKQHKIGKSALECAVCLNE 130
                 V P   A +R+    A RGLD +V+ETFPT +YSDVK  K+GK  LECA+CLNE
Sbjct: 75  GVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNE 134

Query: 131 FEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDSNAVVNSD 190
           FEDDETLRL+PKCDHVFHP CIDAWL +H TCPVCRANL+ Q+ E            + +
Sbjct: 135 FEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEG----------ESVE 194

Query: 191 TDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTRGSRSNRLRWL 250
             G + + +   VV        AP   Q+ T            ++  R  G   +  R  
Sbjct: 195 PGGTEPDLELQQVVVNPEPVVTAPVPEQLVTSE----------VDSRRLPGVPVDLKRVK 254

Query: 251 FPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVV-NRKLNRATSMVVLARQSSSMRG--- 310
           F RSH+TGHS+VQPGE TERFTLRLP ++RK+++ + KLNR  S++VL R  SS RG   
Sbjct: 255 FSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRGKPI 314

Query: 311 ---------------------------YRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS 370
                                       R G+  GS R          D     DRW   
Sbjct: 315 DRSRARSDRWLFRKTPSFLWRSRDDGSIRLGA-TGSVRASAVPNSTGSDSVRAGDRWAFL 374

Query: 371 ITPPFFTRMSSMKTPRSGGSNHGESGSSRELGQGNSTVDSSRLPV 382
               F  R SS+  PR G +  GE  S +  G   ST  S RLPV
Sbjct: 375 RNASFLWRNSSVHVPRGGVNKDGEGTSVKSTGASGSTSGSVRLPV 398

[Close]

BLAST of HG10006450 vs. TAIR 10
Match: AT5G27420.1 (carbon/nitrogen insensitive 1 )

HSP 1 Score: 255.8 bits (652), Expect = 5.6e-68
Identity = 166/367 (45.23%), Postives = 202/367 (55.04%), Query Frame = 0


Query: 17  LFFSVSAQSQLPPDPRSDPYQY--RLSGSMAVIIVILIAALFFMAFFSVYIRHCNDSQSN 76
           L  SVSA     PD R DPY Y   LS +MAV++V++IAALFFM FF+VYIRHC  +   
Sbjct: 16  LLLSVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAVDG 75

Query: 77  TVRPISTAAARSRRAT--RGLDPAVIETFPTLIYSDVKQHKIGKSALECAVCLNEFEDDE 136
           +V P   A  R   AT  RGLD   IETFPT +YS+VK  KIGK ALECA+CLNEFEDDE
Sbjct: 76  SVTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDE 135

Query: 137 TLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDSNAVVNSDTDGGD 196
           TLRL+PKCDHVFHP CI AWL  H TCPVCR NL+ Q  E          VV +     D
Sbjct: 136 TLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPE-------PEVVVET-----D 195

Query: 197 IEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTRGSRSNRLRWLFPRSH 256
           +EAQ    V    +P +  P V+                                FPRSH
Sbjct: 196 LEAQQQSAVP---VPVVELPRVK--------------------------------FPRSH 255

Query: 257 STGHSLVQPGEDTERFTLRLPVEIRKQVV-NRKLNRATSMVVLARQSSSMRGYRFGSGEG 316
           +TGHS+V PGE T+RFTLR+P E+RK+++ N KLNR+ S+ VL R  SS  G        
Sbjct: 256 TTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRSG-------- 308

Query: 317 SSRGKYYRRLERLDRT-SKSDRWVLSITPPFFTRMSSMKTPRSGGSNHGESGSSRELGQG 376
                     +++DR+ +KSDRW+   TP F  R     + R GG     +GS R    G
Sbjct: 316 ----------KQVDRSRAKSDRWLFRKTPSFLWRNRDDGSIRLGG-----TGSVR----G 308

Query: 377 NSTVDSS 378
           NS    S
Sbjct: 376 NSVTSPS 308

[Close]

BLAST of HG10006450 vs. TAIR 10
Match: AT1G72200.1 (RING/U-box superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.9e-52
Identity = 135/335 (40.30%), Postives = 182/335 (54.33%), Query Frame = 0


Query: 39  RLSGSMAVIIVILIAALFFMAFFSVYIRHCND----SQSNTVRPISTAAARSRRATRGLD 98
           R   +MA+++++L++  FF+ FFSVYIR C +                 A +R+  RGLD
Sbjct: 58  RFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLD 117

Query: 99  PAVIETFPTLIYSDVKQHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLA 158
            ++IETFPT  YS VK  +IGK ALEC+VCLNEFEDDETLRLIPKC HVFHP CIDAWL 
Sbjct: 118 ASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLR 177

Query: 159 SHSTCPVCRANLSPQLTESVHRVDDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSV 218
           SH+TCP+CRA+L P   ES+  +     V  +D  G D             + ++  P  
Sbjct: 178 SHTTCPLCRADLIPVPGESIVSIQIPGLV--NDPPGSDPNGD--------RIRSLGSPDA 237

Query: 219 QIQTESEFNTTTGNKTLNRTRTRGSRSN--RLRWLFPRSHSTGHSLVQPGEDTERFTLRL 278
           ++             T N++  R S S    L  +F  S  TG    Q  E+ +RFTLRL
Sbjct: 238 RLIESVAL-------TCNQSMPRRSMSTGWNLAGMFTNSDRTG----QHSENLDRFTLRL 297

Query: 279 PVEIRKQVVNRKLNRATSMVVLARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDR 338
           P +I  ++VN  L++    V L +  SS RGYR GS  GS R  +Y   ER D+  + DR
Sbjct: 298 PQDIHNKLVNPNLSKV--HVALPQVMSSTRGYRTGS-LGSERNYFY--YERFDQDGRLDR 357

Query: 339 WVLSITPPFFTRMSSMKTPRSGGSNHGESGSSREL 368
              SITPP+ T   +  +P   G +   + S + L
Sbjct: 358 RPFSITPPYRTSSINHMSPGGSGGDKVRASSPKSL 366

[Close]

BLAST of HG10006450 vs. TAIR 10
Match: AT1G22500.1 (RING/U-box superfamily protein )

HSP 1 Score: 185.3 bits (469), Expect = 9.4e-47
Identity = 137/368 (37.23%), Postives = 196/368 (53.26%), Query Frame = 0


Query: 13  FFSLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFFMAFFSVYIRHC---- 72
           F  LL   V A S+   + R+       S + A+I+++L++  F +   SVY+R C    
Sbjct: 13  FLLLLLEVVVASSEFDDEGRTS-----FSPTTAIIMIVLVSVFFALGCISVYMRRCLQHA 72

Query: 73  --NDSQSNTVRPISTAAARSRRATR-GLDPAVIETFPTLIYSDVKQHKIGKSALECAVCL 132
              DS       ++      R+ T  GLD +VIETFPT  YS VK  +IGK ALEC VCL
Sbjct: 73  LGMDSGGGPGNWLNV-----RQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCL 132

Query: 133 NEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDSNAVVN 192
           NEFEDDETLRLIP+C HVFHP CIDAWL S +TCP+CRANL P   ESV     S+ +  
Sbjct: 133 NEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESV-----SSEIPG 192

Query: 193 SDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGNKTLNRTRTRGSRSNRLR 252
              + G  +      + +     +  P  ++     +   TGN+++ R      +S    
Sbjct: 193 LARETG--QNSLRTPIDDNRKRVLTSPDERLIDSVAW---TGNQSMPR------KSMSTG 252

Query: 253 WLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATS--MVVLARQSSSMRG 312
           W     +S   S  QP E+ +R+TLRLP EI  Q+VN  L +  S   + L ++ SS+RG
Sbjct: 253 WKLAELYSPASSPGQPEENLDRYTLRLPQEIHDQLVNSSLGKQGSKGQLALPQERSSVRG 312

Query: 313 YRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTP----RSGGSNHG 368
           +R GS  G+ +  +Y   ER D+  + DR   SITPP+ TR  S+++P     + G+   
Sbjct: 313 FRTGS-LGTEKNYFY--FERFDQDGRLDRRPFSITPPYHTR--SIQSPDEIINASGNYQD 349

[Close]

BLAST of HG10006450 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 3.6e-46
Identity = 143/369 (38.75%), Postives = 197/369 (53.39%), Query Frame = 0


Query: 2   SSLTAAHGALFFFSLLFFSV------SAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAAL 61
           SS    H  LF   LL            Q+  P   ++ P     +  + V+I +L   +
Sbjct: 8   SSRWIPHNLLFLLLLLLLQSVPYGFGQTQTTPPGTTKTKP-----NDPVVVVITVLFLVI 67

Query: 62  FFMAFFSVYIRHCND--SQSNTVRPISTAA----ARSRRAT-RGLDPAVIETFPTLIYSD 121
           FFM F S++ R  N   S+S+  R     A     R RR T RGLD   IETFPT +YS+
Sbjct: 68  FFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSE 127

Query: 122 VKQHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSP 181
           VK  +IGK  +ECAVCL EFEDDETLRL+P C HVFH +C+D WL+ HSTCP+CRA+   
Sbjct: 128 VKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRAD--- 187

Query: 182 QLTESVHRVDDSNAVVNSDTDGGDIEAQPHDVVSETNLPTMAPPSVQIQTESEFNTTTGN 241
            L  +    DD +    S TD G I +   D      L +     +   T S  N T   
Sbjct: 188 -LVLNQQGDDDDSTESYSGTDPGTISSST-DPERGMVLESSDAHLLDAVTWSNSNITP-- 247

Query: 242 KTLNRTRTRGSRSNRLRW-LFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNR 301
               R+++ G  S ++   LFPRSHSTGHSL+QP  + +RFTLRLP ++R+Q++  K +R
Sbjct: 248 ----RSKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLM--KTSR 307

Query: 302 ATSMVVLARQSSSMR-GYRFGSGEGSSRGKY-YRRLERLDRTSKSDRWVLSITPPFFTRM 355
               V L  Q+ S R GYR GS  GS R  + Y R     +++ ++R + S++  F  R 
Sbjct: 308 TMGHVALLPQARSSRSGYRSGS-VGSERSAFPYGR-----KSNNNNRRLHSLSFSFSFRS 352

The following BLAST results are available for this feature:

BLAST of HG10006450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888961.1	8.7e-188	91.60	E3 ubiquitin-protein ligase ATL6-like [Benincasa hispida]	[more]
XP_004139190.1	4.5e-184	89.58	E3 ubiquitin-protein ligase ATL6 [Cucumis sativus] >KAE8651591.1 hypothetical pr...	[more]
KAA0047946.1	1.9e-182	89.32	E3 ubiquitin-protein ligase ATL6 [Cucumis melo var. makuwa]	[more]
XP_008454907.2	2.5e-182	89.32	PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis melo] >AAO45753.1 RING/c3HC...	[more]
XP_023545580.1	2.8e-178	87.70	E3 ubiquitin-protein ligase ATL6-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10006450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXX9	2.0e-70	42.96	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
Q8LGA5	7.9e-67	45.23	E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 ...	[more]
Q84W40	2.7e-51	40.30	RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2	[more]
Q9SK92	1.3e-45	37.23	E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 ...	[more]
O64763	5.0e-45	38.75	E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV...	[more]

BLAST of HG10006450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFQ4	2.2e-184	89.58	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021560 P...	[more]
A0A5A7U133	9.1e-183	89.32	E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
Q84KA9	1.2e-182	89.32	RING/c3HC4/PHD zinc finger-like protein OS=Cucumis melo subsp. melo OX=412675 PE...	[more]
A0A1S3C0V4	1.2e-182	89.32	E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo OX=3656 GN=LOC103495208 PE=4 SV...	[more]
A0A6J1G3D2	2.3e-178	87.17	E3 ubiquitin-protein ligase ATL6-like OS=Cucurbita moschata OX=3662 GN=LOC111450...	[more]

BLAST of HG10006450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05200.1	1.4e-71	42.96	RING/U-box superfamily protein	[more]
AT5G27420.1	5.6e-68	45.23	carbon/nitrogen insensitive 1	[more]
AT1G72200.1	1.9e-52	40.30	RING/U-box superfamily protein	[more]
AT1G22500.1	9.4e-47	37.23	RING/U-box superfamily protein	[more]
AT2G35000.1	3.6e-46	38.75	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 121..162 e-value: 4.4E-6 score: 36.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 120..163 e-value: 4.4E-14 score: 52.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 121..163 score: 12.872856
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 80..169 e-value: 7.3E-22 score: 78.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..381
None	No IPR available	PANTHER	PTHR14155:SF544	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 11..319
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 11..319
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 120..163 e-value: 5.42925E-21 score: 83.1283
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 120..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006450.1	HG10006450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane