HG10006350 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006350
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr07: 17594786 .. 17596408 (+)
RNA-Seq Expression	HG10006350
Synteny	HG10006350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATTGTTCCAACTTCAAGAACGATTAATTTTAGAAATTCCCCCTTCCTCAATCTTGATTTATTAGCTAGAGGCTTTTGCGATCTGAATAACGAGGGTTCGGATTCTGATTCTGATTCTGAAATTGAATGTGGGAAGAGTGAGGATGATTACCGTGAGTGTGATTCGAGGGCGGATTCAACCGAAGTTGATCGCGTATGCAAGGTGATTGACGAATTGTTTGCGTTAGATAGGAACATGGAGGCAGTTCTTGATGAGTGTGGTATAAAATTGTCTCACGATCTGGTTTTGGAGGTCTTGGCAAGGTTCAAACAAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATATGATGATGACAATTTTGGGGAAGACGAGACAGTTTGAAACAATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAAGCATTTGCAACTGCAAAAGAGAGGAAGAAAGCTGTTGGGGTCTTTGAGTTGATGAAGAAGTACAAGTATAAAGTGGGTGTAGAAACTATAAATTGCTTGCTTGATAGTTTAGGGAGGGCAAAACTTGGTAAAGAAGCTCAAGTATTTTTTGAGAAGTTACACGGTAGGTTTACTCCAAATTTGCAAACGTACACTGTTTTGTTGAACGGTTGGTGTCGGGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCACAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAGCCAAGGGCCCATCTCCTGATGTCAAAAGCTACACTATTTTGGTTCGGGATTTCTGTAAACAAACCAAGATGAAAGAAGCGGTTGAGTATTTTGAAGAAATGCAGGGAGCGGGATGTCGGCCTGACGCTGGAATCTACACATGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACATGGTTTATGAGCTGCTGAAAGAGATGAAAACAAATGGTTGCCCGCCTGATGGGAAGACCTACAATGCTCTAATCAAGTTGATGACGAATAAGCGAATGCCTGACGATGCTGTTCGGATATACAAGAAGATGGTCGAGAATGGCATTGAACCAACAATCCACACCTACAACATGATGATGAAGTCCTACTTTCAGACGAGGAATTACGAAATGGGTGTTGCTGTTTGGGATGAGATGAAGCAAAAGGGGTGCTGCCCGGACGATAACTCATATACTGTGTTTATCGGGGGGCTCATAAGTCAGGGACGTTGCGGCGAAGCGGGAAAGTATCTAGAGGAGATGATTGACAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTAGCTCAAAAGATGAAGTTTTCTGGTAAATTTGAAGCCTCCAATGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTGAAGAGAAGAAATCCTACAAACATTATCAATGGTGACCATAGCACTTGA

mRNA sequence

ATGTTGATTGTTCCAACTTCAAGAACGATTAATTTTAGAAATTCCCCCTTCCTCAATCTTGATTTATTAGCTAGAGGCTTTTGCGATCTGAATAACGAGGGTTCGGATTCTGATTCTGATTCTGAAATTGAATGTGGGAAGAGTGAGGATGATTACCGTGAGTGTGATTCGAGGGCGGATTCAACCGAAGTTGATCGCGTATGCAAGGTGATTGACGAATTGTTTGCGTTAGATAGGAACATGGAGGCAGTTCTTGATGAGTGTGGTATAAAATTGTCTCACGATCTGGTTTTGGAGGTCTTGGCAAGGTTCAAACAAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATATGATGATGACAATTTTGGGGAAGACGAGACAGTTTGAAACAATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAAGCATTTGCAACTGCAAAAGAGAGGAAGAAAGCTGTTGGGGTCTTTGAGTTGATGAAGAAGTACAAGTATAAAGTGGGTGTAGAAACTATAAATTGCTTGCTTGATAGTTTAGGGAGGGCAAAACTTGGTAAAGAAGCTCAAGTATTTTTTGAGAAGTTACACGGTAGGTTTACTCCAAATTTGCAAACGTACACTGTTTTGTTGAACGGTTGGTGTCGGGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCACAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAGCCAAGGGCCCATCTCCTGATGTCAAAAGCTACACTATTTTGGTTCGGGATTTCTGTAAACAAACCAAGATGAAAGAAGCGGTTGAGTATTTTGAAGAAATGCAGGGAGCGGGATGTCGGCCTGACGCTGGAATCTACACATGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACATGGTTTATGAGCTGCTGAAAGAGATGAAAACAAATGGTTGCCCGCCTGATGGGAAGACCTACAATGCTCTAATCAAGTTGATGACGAATAAGCGAATGCCTGACGATGCTGTTCGGATATACAAGAAGATGGTCGAGAATGGCATTGAACCAACAATCCACACCTACAACATGATGATGAAGTCCTACTTTCAGACGAGGAATTACGAAATGGGTGTTGCTGTTTGGGATGAGATGAAGCAAAAGGGGTGCTGCCCGGACGATAACTCATATACTGTGTTTATCGGGGGGCTCATAAGTCAGGGACGTTGCGGCGAAGCGGGAAAGTATCTAGAGGAGATGATTGACAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTAGCTCAAAAGATGAAGTTTTCTGGTAAATTTGAAGCCTCCAATGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTGAAGAGAAGAAATCCTACAAACATTATCAATGGTGACCATAGCACTTGA

Coding sequence (CDS)

ATGTTGATTGTTCCAACTTCAAGAACGATTAATTTTAGAAATTCCCCCTTCCTCAATCTTGATTTATTAGCTAGAGGCTTTTGCGATCTGAATAACGAGGGTTCGGATTCTGATTCTGATTCTGAAATTGAATGTGGGAAGAGTGAGGATGATTACCGTGAGTGTGATTCGAGGGCGGATTCAACCGAAGTTGATCGCGTATGCAAGGTGATTGACGAATTGTTTGCGTTAGATAGGAACATGGAGGCAGTTCTTGATGAGTGTGGTATAAAATTGTCTCACGATCTGGTTTTGGAGGTCTTGGCAAGGTTCAAACAAGCTCGAAAACCGGCATTTCGATTCTTCTGTTGGGCTGCTCAGAAGCCAGGATTTGCCCATGACTCCAAAACTTACAATATGATGATGACAATTTTGGGGAAGACGAGACAGTTTGAAACAATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAAGCATTTGCAACTGCAAAAGAGAGGAAGAAAGCTGTTGGGGTCTTTGAGTTGATGAAGAAGTACAAGTATAAAGTGGGTGTAGAAACTATAAATTGCTTGCTTGATAGTTTAGGGAGGGCAAAACTTGGTAAAGAAGCTCAAGTATTTTTTGAGAAGTTACACGGTAGGTTTACTCCAAATTTGCAAACGTACACTGTTTTGTTGAACGGTTGGTGTCGGGTGAGGAATCTAATGGAAGCTGGGAAGATATGGAATCAGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCACAATACCATGCTTGAAGGCTTGTTGAGGTGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAGCCAAGGGCCCATCTCCTGATGTCAAAAGCTACACTATTTTGGTTCGGGATTTCTGTAAACAAACCAAGATGAAAGAAGCGGTTGAGTATTTTGAAGAAATGCAGGGAGCGGGATGTCGGCCTGACGCTGGAATCTACACATGTTTGATCACAGGGTTTGGGAATCAGAAAAGGATGGACATGGTTTATGAGCTGCTGAAAGAGATGAAAACAAATGGTTGCCCGCCTGATGGGAAGACCTACAATGCTCTAATCAAGTTGATGACGAATAAGCGAATGCCTGACGATGCTGTTCGGATATACAAGAAGATGGTCGAGAATGGCATTGAACCAACAATCCACACCTACAACATGATGATGAAGTCCTACTTTCAGACGAGGAATTACGAAATGGGTGTTGCTGTTTGGGATGAGATGAAGCAAAAGGGGTGCTGCCCGGACGATAACTCATATACTGTGTTTATCGGGGGGCTCATAAGTCAGGGACGTTGCGGCGAAGCGGGAAAGTATCTAGAGGAGATGATTGACAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGGAGACCTGATATTCTTGAAGAATTAGCTCAAAAGATGAAGTTTTCTGGTAAATTTGAAGCCTCCAATGTGATTGCAAGGTGGGCTGAGATGATGAGGAAGAGGGTGAAGAGAAGAAATCCTACAAACATTATCAATGGTGACCATAGCACTTGA

Protein sequence

MLIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRECDSRADSTEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHST

Homology

[Close]

BLAST of HG10006350 vs. NCBI nr
Match: XP_038890736.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 1055.0 bits (2727), Expect = 2.1e-304
Identity = 513/539 (95.18%), Postives = 525/539 (97.40%), Query Frame = 0


Query: 2   LIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRECDSRADS 61
           ++ PTSRTINFRNS F +LDLLARGFCDLNNEGSDSD DSEIECGKSEDDYREC+SR DS
Sbjct: 88  VLTPTSRTINFRNSTFPSLDLLARGFCDLNNEGSDSDYDSEIECGKSEDDYRECNSRVDS 147

Query: 62  TEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQK 121
           TEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLE+LAR+KQARKPAFRFFCWAAQK
Sbjct: 148 TEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEILARYKQARKPAFRFFCWAAQK 207

Query: 122 PGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKA 181
           PGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFA AKERKKA
Sbjct: 208 PGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKKA 267

Query: 182 VGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGW 241
           +G+FE+MKKYKYKVGVETINCLLDSLGRAKLGKEA   FEKL GRFTPNLQTYTVLLNGW
Sbjct: 268 IGIFEMMKKYKYKVGVETINCLLDSLGRAKLGKEALAVFEKLRGRFTPNLQTYTVLLNGW 327

Query: 242 CRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDV 301
           CRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDV
Sbjct: 328 CRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDV 387

Query: 302 KSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKE 361
           KSYTILVRDFCKQTKMKEAVEYFEEMQG GCRPDAGIYTCLITGFGNQKR+DMVY LLKE
Sbjct: 388 KSYTILVRDFCKQTKMKEAVEYFEEMQGVGCRPDAGIYTCLITGFGNQKRLDMVYGLLKE 447

Query: 362 MKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRN 421
           MKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKM+ENGIEPTIHTYNMMMKSYFQTRN
Sbjct: 448 MKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIEPTIHTYNMMMKSYFQTRN 507

Query: 422 YEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNK 481
           YEMGVAVWDEMKQKGCCPDDNSYTVFIGGLIS GRC EAGKYLEEMI+KGMKAPQLDYNK
Sbjct: 508 YEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNK 567

Query: 482 FAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHST 541
           FAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHST
Sbjct: 568 FAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHST 626

[Close]

BLAST of HG10006350 vs. NCBI nr
Match: KAA0048071.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96465.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1013.1 bits (2618), Expect = 9.2e-292
Identity = 498/539 (92.39%), Postives = 512/539 (94.99%), Query Frame = 0


Query: 1   MLIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRECDSRAD 60
           +LIVP SRTI+FRN  F +LDLLARG+CDLNN    SDSDSEIEC KSEDD RECDSR D
Sbjct: 89  LLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN----SDSDSEIECEKSEDDDRECDSRVD 148

Query: 61  STEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 120
           STEVDRVCKVIDELFALDRNMEAVLDECG+KLSHDLVLEVLARFK+ARKPAFRFFCWAAQ
Sbjct: 149 STEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKRARKPAFRFFCWAAQ 208

Query: 121 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKK 180
           KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFA AKERKK
Sbjct: 209 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKK 268

Query: 181 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNG 240
           AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA   FEKLHGRFTPNLQTYTVLLNG
Sbjct: 269 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNG 328

Query: 241 WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD 300
           WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMK KGPSPD
Sbjct: 329 WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKTKGPSPD 388

Query: 301 VKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLK 360
           VKSYTILVR+FCKQ KMKEAVEYFEEMQGAGCRPD  IYTCLITGFGNQKRMDMVY LLK
Sbjct: 389 VKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDVAIYTCLITGFGNQKRMDMVYGLLK 448

Query: 361 EMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTR 420
           EM+ NGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKM+ENG EPTIHTY+MMMKSYFQTR
Sbjct: 449 EMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGFEPTIHTYSMMMKSYFQTR 508

Query: 421 NYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYN 480
           NYEMGVA W+EMK+KGCCPDDNSYTVFIGGLIS GRC EAGKYLEEMI+KGMKAPQLDYN
Sbjct: 509 NYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGRCVEAGKYLEEMIEKGMKAPQLDYN 568

Query: 481 KFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHS 540
           KFAADFSRAGRPDILEELAQKMKFSGKFEAS+VIARWAEMMRKRVKRRNPTN  NGDHS
Sbjct: 569 KFAADFSRAGRPDILEELAQKMKFSGKFEASSVIARWAEMMRKRVKRRNPTNFTNGDHS 623

[Close]

BLAST of HG10006350 vs. NCBI nr
Match: XP_008453445.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1006.9 bits (2602), Expect = 6.6e-290
Identity = 494/539 (91.65%), Postives = 511/539 (94.81%), Query Frame = 0


Query: 1   MLIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRECDSRAD 60
           +L VP SRTI+FRN  F +LDLLARG+CDLNN    SDSDSEIEC KSEDD RECDSR D
Sbjct: 89  LLTVPPSRTIDFRNPLFPSLDLLARGYCDLNN----SDSDSEIECEKSEDDDRECDSRVD 148

Query: 61  STEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 120
           STEVDRVCKVIDELFALDRNMEAVLDECG++L+HDLVLEVLARFK+ARKPAFRFFCWAAQ
Sbjct: 149 STEVDRVCKVIDELFALDRNMEAVLDECGVELTHDLVLEVLARFKRARKPAFRFFCWAAQ 208

Query: 121 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKK 180
           KPGFAHDSKTYNMMMTILG+TRQFETMVSLLEEMAEKELLTMETFTICFKAFA AKERKK
Sbjct: 209 KPGFAHDSKTYNMMMTILGRTRQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKK 268

Query: 181 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNG 240
           AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA   FEKLHGRFTPNLQTYTVLLNG
Sbjct: 269 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNG 328

Query: 241 WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD 300
           WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMK KGPSPD
Sbjct: 329 WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKTKGPSPD 388

Query: 301 VKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLK 360
           VKSYTILVR+FCKQ KMKEAVEYFEEMQGAGCRPD  IYTCLITGFGNQKRMDMVY LLK
Sbjct: 389 VKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDVAIYTCLITGFGNQKRMDMVYGLLK 448

Query: 361 EMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTR 420
           EM+ NGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKM+ENG EPTIHTY+MMMKSYFQTR
Sbjct: 449 EMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGFEPTIHTYSMMMKSYFQTR 508

Query: 421 NYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYN 480
           NYEMGVA W+EMK+KGCCPDDN YTVFIGGLIS GRC EAGKYLEEMI+KGMKAPQLDYN
Sbjct: 509 NYEMGVAAWNEMKRKGCCPDDNLYTVFIGGLISLGRCVEAGKYLEEMIEKGMKAPQLDYN 568

Query: 481 KFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHS 540
           KFAADFSRAGRPDILEELAQKMKFSGKFEAS+VIARWAEMMRKRVKRRNPTN INGDHS
Sbjct: 569 KFAADFSRAGRPDILEELAQKMKFSGKFEASSVIARWAEMMRKRVKRRNPTNFINGDHS 623

[Close]

BLAST of HG10006350 vs. NCBI nr
Match: XP_022156436.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Momordica charantia])

HSP 1 Score: 1000.7 bits (2586), Expect = 4.7e-288
Identity = 492/538 (91.45%), Postives = 506/538 (94.05%), Query Frame = 0


Query: 1   MLIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRECDSRAD 60
           MLIVP SRTIN RN PF N DLLARGFC LNNE SD  SDSEIECGKSEDD REC SR D
Sbjct: 104 MLIVPKSRTINSRNPPFPNFDLLARGFCHLNNEDSDCYSDSEIECGKSEDDDRECGSRVD 163

Query: 61  STEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 120
           STEVDRVCKVIDELFALDRNMEAVLDE   KLSHDLVLEVL RFKQARKPAFRFFCWAAQ
Sbjct: 164 STEVDRVCKVIDELFALDRNMEAVLDESSFKLSHDLVLEVLGRFKQARKPAFRFFCWAAQ 223

Query: 121 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKK 180
           KPGFAHDS TYN+MMTILGKT+QFETMVSLLEEMAEKELLTMETFTICFKAFA AKERKK
Sbjct: 224 KPGFAHDSTTYNVMMTILGKTKQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKK 283

Query: 181 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNG 240
           AVG+FELMKKYKYKVGVETINCLLDSLGR KLGKEAQ  FEKL GRFTPNL+TYTVLLNG
Sbjct: 284 AVGIFELMKKYKYKVGVETINCLLDSLGREKLGKEAQTLFEKLRGRFTPNLKTYTVLLNG 343

Query: 241 WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD 300
           WCRVRNLMEAGKIWN MIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD
Sbjct: 344 WCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD 403

Query: 301 VKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLK 360
           VKSYTIL+RDFCKQ KMKEA+EYF+EMQGAGCR DAGIYTCLITGFGNQKRMDMVY LLK
Sbjct: 404 VKSYTILIRDFCKQAKMKEAIEYFDEMQGAGCRADAGIYTCLITGFGNQKRMDMVYGLLK 463

Query: 361 EMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTR 420
           EMKTN CPPDGK+YNALIKLMT++RMPDDAVRIYKKMVE+ IEPTIHTYNMMMKSYFQTR
Sbjct: 464 EMKTNSCPPDGKSYNALIKLMTSRRMPDDAVRIYKKMVESSIEPTIHTYNMMMKSYFQTR 523

Query: 421 NYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYN 480
           NYEMG A+W+EMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMI+KGMKAPQLDYN
Sbjct: 524 NYEMGAAIWEEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIEKGMKAPQLDYN 583

Query: 481 KFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDH 539
           KFAADFSR GRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTN ING H
Sbjct: 584 KFAADFSRVGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTN-INGGH 640

[Close]

BLAST of HG10006350 vs. NCBI nr
Match: XP_004144748.1 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial [Cucumis sativus] >KGN61002.1 hypothetical protein Csa_021233 [Cucumis sativus])

HSP 1 Score: 991.9 bits (2563), Expect = 2.2e-285
Identity = 493/541 (91.13%), Postives = 506/541 (93.53%), Query Frame = 0


Query: 1   MLIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKS-EDDYRECDSRA 60
           +LIV T RTI+FRN PF +LDLLARGFCDL+N     DSDSEIEC KS E+D REC    
Sbjct: 89  LLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN----PDSDSEIECEKSEEEDNREC---- 148

Query: 61  DSTEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAA 120
           DSTEV+RVCKVIDELFALDRNMEAVLDECG+KLSHDLVLEVLARFKQARKPAFRFFCWAA
Sbjct: 149 DSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAA 208

Query: 121 QKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERK 180
           QKPGFAHDSKTYN MMTILGKTRQFETMVSLLEEMAEKELLTMETFT+CFKAFA AKERK
Sbjct: 209 QKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERK 268

Query: 181 KAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLN 240
           KAVGV ELMKKYKYKVGVETINCLLDSLGRAKLGKEA   FEKLHGRFTPNLQTYTVLLN
Sbjct: 269 KAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLN 328

Query: 241 GWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 300
           GWCRVRNLMEAGKIWNQMIDE FKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP
Sbjct: 329 GWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 388

Query: 301 DVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELL 360
           DVKSYTILVRDFCKQ KMKEAV+YFEEMQGAGCRPDA IYTCLITGFGNQKRMD VY LL
Sbjct: 389 DVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLL 448

Query: 361 KEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQT 420
           KEMK NGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKM+ENGI+PT HTY+MMMKSYFQT
Sbjct: 449 KEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQT 508

Query: 421 RNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDY 480
           RNYEMGVA WDEMK KGCCPDDNSYTVFIGGLIS GRC EAGKYLEEMI+KGMKAPQLDY
Sbjct: 509 RNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDY 568

Query: 481 NKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHS 540
           NKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTN IN DHS
Sbjct: 569 NKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNFINDDHS 621

[Close]

BLAST of HG10006350 vs. ExPASy Swiss-Prot
Match: Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 3.4e-212
Identity = 358/513 (69.79%), Postives = 424/513 (82.65%), Query Frame = 0


Query: 18  LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 77
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 83  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 142

Query: 78  ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 137
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM
Sbjct: 143 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMM 202

Query: 138 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 197
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 203 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262

Query: 198 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 257
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322

Query: 258 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 317
            MID+G KPDIVAHN MLEGLLR +K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382

Query: 318 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 377
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442

Query: 378 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 437
           ALIKLM N++MP+ A RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVW+EM +K
Sbjct: 443 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK 502

Query: 438 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 497
           G CPDDNSYTV I GLI +G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562

Query: 498 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 529
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 563 EELAQRAKFSGKFAAAEIFARWAQMTRRRFKQR 595

[Close]

BLAST of HG10006350 vs. ExPASy Swiss-Prot
Match: Q9LEQ7 (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 7.5e-212
Identity = 359/513 (69.98%), Postives = 422/513 (82.26%), Query Frame = 0


Query: 18  LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 77
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 82  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 141

Query: 78  ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 137
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM
Sbjct: 142 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMM 201

Query: 138 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 197
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 202 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 261

Query: 198 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 257
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 262 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 321

Query: 258 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 317
            MID G KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 381

Query: 318 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 377
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441

Query: 378 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 437
           ALIKLM N++MP+   RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVWDEM +K
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 501

Query: 438 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 497
           G CPDDNSYTV I GLIS+G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 561

Query: 498 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 529
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 562 EELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 594

[Close]

BLAST of HG10006350 vs. ExPASy Swiss-Prot
Match: Q3EAF8 (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 6.3e-211
Identity = 358/513 (69.79%), Postives = 421/513 (82.07%), Query Frame = 0


Query: 18  LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 77
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 83  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 142

Query: 78  ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 137
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAH S+TYN MM
Sbjct: 143 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMM 202

Query: 138 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 197
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 203 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262

Query: 198 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 257
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322

Query: 258 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 317
            MID G KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382

Query: 318 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 377
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442

Query: 378 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 437
           ALIKLM N++MP+   RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVWDEM +K
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 502

Query: 438 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 497
           G CPDDNSYTV I GLIS+G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562

Query: 498 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 529
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 563 EELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 595

[Close]

BLAST of HG10006350 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 9.8e-71
Identity = 135/443 (30.47%), Postives = 248/443 (55.98%), Query Frame = 0


Query: 61  STEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 120
           S + +R+CK++ +    D  +E +L+E  +KLS  L+ EVL +   A   A   F WA  
Sbjct: 63  SQDAERICKILTKF--TDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 122

Query: 121 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKK 180
           + GF H +  YN ++  LGK +QF+ + SL+++M  K+LL+ ETF +  + +A A++ K+
Sbjct: 123 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 182

Query: 181 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKL-HGRFTPNLQTYTVLLN 240
           A+G F  M+++ +K+     N +LD+L +++   +AQ  F+K+   RF P++++YT+LL 
Sbjct: 183 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 242

Query: 241 GWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 300
           GW +  NL+   ++  +M DEGF+PD+VA+  ++    + KK  +AI+ F  M+ +   P
Sbjct: 243 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 302

Query: 301 DVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELL 360
               +  L+     + K+ +A+E+FE  + +G   +A  Y  L+  +   +RM+  Y+ +
Sbjct: 303 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 362

Query: 361 KEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQT 420
            EM+  G  P+ +TY+ ++  +   +   +A  +Y+ M     EPT+ TY +M++ +   
Sbjct: 363 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNK 422

Query: 421 RNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDY 480
              +M + +WDEMK KG  P  + ++  I  L  + +  EA +Y  EM+D G++ P   +
Sbjct: 423 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 482

Query: 481 NKFAADFSRAGRPDILEELAQKM 503
           ++        GR D + +L  KM
Sbjct: 483 SRLKQTLLDEGRKDKVTDLVVKM 500

[Close]

BLAST of HG10006350 vs. ExPASy Swiss-Prot
Match: Q9FVX2 (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 258.1 bits (658), Expect = 2.3e-67
Identity = 142/460 (30.87%), Postives = 256/460 (55.65%), Query Frame = 0


Query: 45  CGKSEDDYRECDSRADSTEVDRVCKVIDELFALDRN--MEAVLDECGIKLSHDLVLEVLA 104
           C KS    R   S     +V  V K I ++        +++ LD+ G+++S ++V +VL 
Sbjct: 49  CCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLN 108

Query: 105 RFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTM 164
           RF+ A    +RFF W+ ++  + H  + Y+MM+    K RQ++ M  L+  M +K++L +
Sbjct: 109 RFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNV 168

Query: 165 ETFTICFKAFATAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEK 224
           ETF I  + +A A++  +A+  F +M+KY     +   N LL +L ++K  ++AQ  FE 
Sbjct: 169 ETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN 228

Query: 225 LHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKR 284
           +  RFTP+ +TY++LL GW +  NL +A +++ +MID G  PDIV ++ M++ L +  + 
Sbjct: 229 MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288

Query: 285 SDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCL 344
            +A+ +   M      P    Y++LV  +  + +++EAV+ F EM+ +G + D  ++  L
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348

Query: 345 ITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGI 404
           I  F    RM  VY +LKEMK+ G  P+ K+ N +++ +  +   D+A  +++KM++   
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VC 408

Query: 405 EPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGK 464
           EP   TY M++K + + +  E    VW  M++KG  P  ++++V I GL  +    +A  
Sbjct: 409 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 468

Query: 465 YLEEMIDKGMKAPQLDYNKFAADFSRAGRPDILEELAQKM 503
            LEEMI+ G++   + + +      +  R D+L+ L +KM
Sbjct: 469 LLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507

[Close]

BLAST of HG10006350 vs. ExPASy TrEMBL
Match: A0A5D3BDC8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001090 PE=4 SV=1)

HSP 1 Score: 1013.1 bits (2618), Expect = 4.4e-292
Identity = 498/539 (92.39%), Postives = 512/539 (94.99%), Query Frame = 0


Query: 1   MLIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRECDSRAD 60
           +LIVP SRTI+FRN  F +LDLLARG+CDLNN    SDSDSEIEC KSEDD RECDSR D
Sbjct: 89  LLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN----SDSDSEIECEKSEDDDRECDSRVD 148

Query: 61  STEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 120
           STEVDRVCKVIDELFALDRNMEAVLDECG+KLSHDLVLEVLARFK+ARKPAFRFFCWAAQ
Sbjct: 149 STEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKRARKPAFRFFCWAAQ 208

Query: 121 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKK 180
           KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFA AKERKK
Sbjct: 209 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKK 268

Query: 181 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNG 240
           AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA   FEKLHGRFTPNLQTYTVLLNG
Sbjct: 269 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNG 328

Query: 241 WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD 300
           WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMK KGPSPD
Sbjct: 329 WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKTKGPSPD 388

Query: 301 VKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLK 360
           VKSYTILVR+FCKQ KMKEAVEYFEEMQGAGCRPD  IYTCLITGFGNQKRMDMVY LLK
Sbjct: 389 VKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDVAIYTCLITGFGNQKRMDMVYGLLK 448

Query: 361 EMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTR 420
           EM+ NGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKM+ENG EPTIHTY+MMMKSYFQTR
Sbjct: 449 EMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGFEPTIHTYSMMMKSYFQTR 508

Query: 421 NYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYN 480
           NYEMGVA W+EMK+KGCCPDDNSYTVFIGGLIS GRC EAGKYLEEMI+KGMKAPQLDYN
Sbjct: 509 NYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGRCVEAGKYLEEMIEKGMKAPQLDYN 568

Query: 481 KFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHS 540
           KFAADFSRAGRPDILEELAQKMKFSGKFEAS+VIARWAEMMRKRVKRRNPTN  NGDHS
Sbjct: 569 KFAADFSRAGRPDILEELAQKMKFSGKFEASSVIARWAEMMRKRVKRRNPTNFTNGDHS 623

[Close]

BLAST of HG10006350 vs. ExPASy TrEMBL
Match: A0A1S3BWC0 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494147 PE=4 SV=1)

HSP 1 Score: 1006.9 bits (2602), Expect = 3.2e-290
Identity = 494/539 (91.65%), Postives = 511/539 (94.81%), Query Frame = 0


Query: 1   MLIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRECDSRAD 60
           +L VP SRTI+FRN  F +LDLLARG+CDLNN    SDSDSEIEC KSEDD RECDSR D
Sbjct: 89  LLTVPPSRTIDFRNPLFPSLDLLARGYCDLNN----SDSDSEIECEKSEDDDRECDSRVD 148

Query: 61  STEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 120
           STEVDRVCKVIDELFALDRNMEAVLDECG++L+HDLVLEVLARFK+ARKPAFRFFCWAAQ
Sbjct: 149 STEVDRVCKVIDELFALDRNMEAVLDECGVELTHDLVLEVLARFKRARKPAFRFFCWAAQ 208

Query: 121 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKK 180
           KPGFAHDSKTYNMMMTILG+TRQFETMVSLLEEMAEKELLTMETFTICFKAFA AKERKK
Sbjct: 209 KPGFAHDSKTYNMMMTILGRTRQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKK 268

Query: 181 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNG 240
           AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA   FEKLHGRFTPNLQTYTVLLNG
Sbjct: 269 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNG 328

Query: 241 WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD 300
           WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMK KGPSPD
Sbjct: 329 WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKTKGPSPD 388

Query: 301 VKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLK 360
           VKSYTILVR+FCKQ KMKEAVEYFEEMQGAGCRPD  IYTCLITGFGNQKRMDMVY LLK
Sbjct: 389 VKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDVAIYTCLITGFGNQKRMDMVYGLLK 448

Query: 361 EMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTR 420
           EM+ NGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKM+ENG EPTIHTY+MMMKSYFQTR
Sbjct: 449 EMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGFEPTIHTYSMMMKSYFQTR 508

Query: 421 NYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYN 480
           NYEMGVA W+EMK+KGCCPDDN YTVFIGGLIS GRC EAGKYLEEMI+KGMKAPQLDYN
Sbjct: 509 NYEMGVAAWNEMKRKGCCPDDNLYTVFIGGLISLGRCVEAGKYLEEMIEKGMKAPQLDYN 568

Query: 481 KFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHS 540
           KFAADFSRAGRPDILEELAQKMKFSGKFEAS+VIARWAEMMRKRVKRRNPTN INGDHS
Sbjct: 569 KFAADFSRAGRPDILEELAQKMKFSGKFEASSVIARWAEMMRKRVKRRNPTNFINGDHS 623

[Close]

BLAST of HG10006350 vs. ExPASy TrEMBL
Match: A0A6J1DUY7 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111023327 PE=4 SV=1)

HSP 1 Score: 1000.7 bits (2586), Expect = 2.3e-288
Identity = 492/538 (91.45%), Postives = 506/538 (94.05%), Query Frame = 0


Query: 1   MLIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRECDSRAD 60
           MLIVP SRTIN RN PF N DLLARGFC LNNE SD  SDSEIECGKSEDD REC SR D
Sbjct: 104 MLIVPKSRTINSRNPPFPNFDLLARGFCHLNNEDSDCYSDSEIECGKSEDDDRECGSRVD 163

Query: 61  STEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 120
           STEVDRVCKVIDELFALDRNMEAVLDE   KLSHDLVLEVL RFKQARKPAFRFFCWAAQ
Sbjct: 164 STEVDRVCKVIDELFALDRNMEAVLDESSFKLSHDLVLEVLGRFKQARKPAFRFFCWAAQ 223

Query: 121 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKK 180
           KPGFAHDS TYN+MMTILGKT+QFETMVSLLEEMAEKELLTMETFTICFKAFA AKERKK
Sbjct: 224 KPGFAHDSTTYNVMMTILGKTKQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKK 283

Query: 181 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNG 240
           AVG+FELMKKYKYKVGVETINCLLDSLGR KLGKEAQ  FEKL GRFTPNL+TYTVLLNG
Sbjct: 284 AVGIFELMKKYKYKVGVETINCLLDSLGREKLGKEAQTLFEKLRGRFTPNLKTYTVLLNG 343

Query: 241 WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD 300
           WCRVRNLMEAGKIWN MIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD
Sbjct: 344 WCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD 403

Query: 301 VKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLK 360
           VKSYTIL+RDFCKQ KMKEA+EYF+EMQGAGCR DAGIYTCLITGFGNQKRMDMVY LLK
Sbjct: 404 VKSYTILIRDFCKQAKMKEAIEYFDEMQGAGCRADAGIYTCLITGFGNQKRMDMVYGLLK 463

Query: 361 EMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTR 420
           EMKTN CPPDGK+YNALIKLMT++RMPDDAVRIYKKMVE+ IEPTIHTYNMMMKSYFQTR
Sbjct: 464 EMKTNSCPPDGKSYNALIKLMTSRRMPDDAVRIYKKMVESSIEPTIHTYNMMMKSYFQTR 523

Query: 421 NYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYN 480
           NYEMG A+W+EMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMI+KGMKAPQLDYN
Sbjct: 524 NYEMGAAIWEEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIEKGMKAPQLDYN 583

Query: 481 KFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDH 539
           KFAADFSR GRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTN ING H
Sbjct: 584 KFAADFSRVGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTN-INGGH 640

[Close]

BLAST of HG10006350 vs. ExPASy TrEMBL
Match: A0A0A0LK05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034550 PE=4 SV=1)

HSP 1 Score: 991.9 bits (2563), Expect = 1.1e-285
Identity = 493/541 (91.13%), Postives = 506/541 (93.53%), Query Frame = 0


Query: 1   MLIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKS-EDDYRECDSRA 60
           +LIV T RTI+FRN PF +LDLLARGFCDL+N     DSDSEIEC KS E+D REC    
Sbjct: 89  LLIVSTLRTIDFRNPPFPSLDLLARGFCDLSN----PDSDSEIECEKSEEEDNREC---- 148

Query: 61  DSTEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAA 120
           DSTEV+RVCKVIDELFALDRNMEAVLDECG+KLSHDLVLEVLARFKQARKPAFRFFCWAA
Sbjct: 149 DSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAA 208

Query: 121 QKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERK 180
           QKPGFAHDSKTYN MMTILGKTRQFETMVSLLEEMAEKELLTMETFT+CFKAFA AKERK
Sbjct: 209 QKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCFKAFAAAKERK 268

Query: 181 KAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLN 240
           KAVGV ELMKKYKYKVGVETINCLLDSLGRAKLGKEA   FEKLHGRFTPNLQTYTVLLN
Sbjct: 269 KAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLN 328

Query: 241 GWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 300
           GWCRVRNLMEAGKIWNQMIDE FKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP
Sbjct: 329 GWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 388

Query: 301 DVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELL 360
           DVKSYTILVRDFCKQ KMKEAV+YFEEMQGAGCRPDA IYTCLITGFGNQKRMD VY LL
Sbjct: 389 DVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLL 448

Query: 361 KEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQT 420
           KEMK NGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKM+ENGI+PT HTY+MMMKSYFQT
Sbjct: 449 KEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQT 508

Query: 421 RNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDY 480
           RNYEMGVA WDEMK KGCCPDDNSYTVFIGGLIS GRC EAGKYLEEMI+KGMKAPQLDY
Sbjct: 509 RNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDY 568

Query: 481 NKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHS 540
           NKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTN IN DHS
Sbjct: 569 NKFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNFINDDHS 621

[Close]

BLAST of HG10006350 vs. ExPASy TrEMBL
Match: A0A6J1FBQ0 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111443968 PE=4 SV=1)

HSP 1 Score: 977.6 bits (2526), Expect = 2.1e-281
Identity = 479/539 (88.87%), Postives = 499/539 (92.58%), Query Frame = 0


Query: 1   MLIVPTSRTINFRNSPFLNLDLLARGFCDLNNEGSDSDSDSEIECGKSEDDYRECDSRAD 60
           MLI  +SRTINFRN PF   DLL RGFCD N     S SDSEIEC  SEDD RE DSRA+
Sbjct: 88  MLIATSSRTINFRNPPFPCFDLLVRGFCDRN-----SHSDSEIECEISEDDDRESDSRAN 147

Query: 61  STEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 120
             EVDRVCKV+DELFALDRNMEAVLDECG+ LSHDLVL VL RFKQARKPAFRFFCWAA 
Sbjct: 148 PIEVDRVCKVLDELFALDRNMEAVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWAAH 207

Query: 121 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKK 180
           KPGF+HDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFK+FA AKER+K
Sbjct: 208 KPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRK 267

Query: 181 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNG 240
           A+G+FELMKKYKYKVGVETINCLLDSLGRAKLGKEAQ  FEKL GRFTPNLQTYTVLLNG
Sbjct: 268 AIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNG 327

Query: 241 WCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD 300
           WCRVRNLMEAGKIWN MIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD
Sbjct: 328 WCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPD 387

Query: 301 VKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLK 360
           VKSYTILVRDFCKQ KMKEAVEYFEEMQ AGCRPD GIYTCLITGFGNQ+RMDM+Y +LK
Sbjct: 388 VKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILK 447

Query: 361 EMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTR 420
           EMKTNGCPPDGKTYN+LIKLMTN+RMPDDA RIY KM+E+GI+PTIHTYNMMMKSYFQTR
Sbjct: 448 EMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTR 507

Query: 421 NYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYN 480
           NYEMGV VWDEMKQKGCCPDDNSYTVFIGGLIS GRC EAGKYLEEMI+KGMKAPQLDYN
Sbjct: 508 NYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYN 567

Query: 481 KFAADFSRAGRPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNIINGDHS 540
           KFAADFSRAGRPDILEELAQK+KFSGKFEASNVIARWAEMMRKRVKRR PTNI+N DHS
Sbjct: 568 KFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWAEMMRKRVKRRTPTNIVNADHS 621

[Close]

BLAST of HG10006350 vs. TAIR 10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 739.2 bits (1907), Expect = 2.4e-213
Identity = 358/513 (69.79%), Postives = 424/513 (82.65%), Query Frame = 0


Query: 18  LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 77
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 83  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 142

Query: 78  ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 137
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM
Sbjct: 143 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMM 202

Query: 138 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 197
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 203 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262

Query: 198 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 257
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322

Query: 258 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 317
            MID+G KPDIVAHN MLEGLLR +K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382

Query: 318 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 377
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442

Query: 378 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 437
           ALIKLM N++MP+ A RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVW+EM +K
Sbjct: 443 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK 502

Query: 438 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 497
           G CPDDNSYTV I GLI +G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562

Query: 498 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 529
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 563 EELAQRAKFSGKFAAAEIFARWAQMTRRRFKQR 595

[Close]

BLAST of HG10006350 vs. TAIR 10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 738.0 bits (1904), Expect = 5.3e-213
Identity = 359/513 (69.98%), Postives = 422/513 (82.26%), Query Frame = 0


Query: 18  LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 77
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 82  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 141

Query: 78  ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 137
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAHDS+TYN MM
Sbjct: 142 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMM 201

Query: 138 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 197
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 202 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 261

Query: 198 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 257
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 262 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 321

Query: 258 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 317
            MID G KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 381

Query: 318 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 377
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441

Query: 378 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 437
           ALIKLM N++MP+   RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVWDEM +K
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 501

Query: 438 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 497
           G CPDDNSYTV I GLIS+G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 561

Query: 498 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 529
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 562 EELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 594

[Close]

BLAST of HG10006350 vs. TAIR 10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 734.9 bits (1896), Expect = 4.5e-212
Identity = 358/513 (69.79%), Postives = 421/513 (82.07%), Query Frame = 0


Query: 18  LNLDLLARGFCDLNNEGSDS-DSDSEIECGKSEDDYREC-DSRADSTEVDRVCKVIDELF 77
           L+  L  RGF   ++  SD  D + E EC   E+    C +S  +  EV+RVCKVIDELF
Sbjct: 83  LDASLGCRGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELF 142

Query: 78  ALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMM 137
           ALDRNMEAVLDE  + LSHDL++EVL RF+ ARKPAFRFFCWAA++ GFAH S+TYN MM
Sbjct: 143 ALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMM 202

Query: 138 TILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKKAVGVFELMKKYKYKV 197
           +IL KTRQFETMVS+LEEM  K LLTMETFTI  KAFA AKERKKAVG+FELMKKYK+K+
Sbjct: 203 SILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262

Query: 198 GVETINCLLDSLGRAKLGKEAQVFFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN 257
           GVETINCLLDSLGRAKLGKEAQV F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322

Query: 258 QMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQT 317
            MID G KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382

Query: 318 KMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYN 377
            M+ A+EYF++M  +G +PDA +YTCLITGFG QK++D VYELLKEM+  G PPDGKTYN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442

Query: 378 ALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQK 437
           ALIKLM N++MP+   RIY KM++N IEP+IHT+NM+MKSYF  RNYEMG AVWDEM +K
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 502

Query: 438 GCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDYNKFAADFSRAGRPDIL 497
           G CPDDNSYTV I GLIS+G+  EA +YLEEM+DKGMK P +DYNKFAADF R G+P+I 
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562

Query: 498 EELAQKMKFSGKFEASNVIARWAEMMRKRVKRR 529
           EELAQ+ KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 563 EELAQRAKFSGKFAAAEIFARWAQMTRRRCKQR 595

[Close]

BLAST of HG10006350 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 269.2 bits (687), Expect = 7.0e-72
Identity = 135/443 (30.47%), Postives = 248/443 (55.98%), Query Frame = 0


Query: 61  STEVDRVCKVIDELFALDRNMEAVLDECGIKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 120
           S + +R+CK++ +    D  +E +L+E  +KLS  L+ EVL +   A   A   F WA  
Sbjct: 63  SQDAERICKILTKF--TDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 122

Query: 121 KPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKAFATAKERKK 180
           + GF H +  YN ++  LGK +QF+ + SL+++M  K+LL+ ETF +  + +A A++ K+
Sbjct: 123 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 182

Query: 181 AVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEKL-HGRFTPNLQTYTVLLN 240
           A+G F  M+++ +K+     N +LD+L +++   +AQ  F+K+   RF P++++YT+LL 
Sbjct: 183 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 242

Query: 241 GWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSP 300
           GW +  NL+   ++  +M DEGF+PD+VA+  ++    + KK  +AI+ F  M+ +   P
Sbjct: 243 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 302

Query: 301 DVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCLITGFGNQKRMDMVYELL 360
               +  L+     + K+ +A+E+FE  + +G   +A  Y  L+  +   +RM+  Y+ +
Sbjct: 303 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 362

Query: 361 KEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGIEPTIHTYNMMMKSYFQT 420
            EM+  G  P+ +TY+ ++  +   +   +A  +Y+ M     EPT+ TY +M++ +   
Sbjct: 363 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNK 422

Query: 421 RNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGKYLEEMIDKGMKAPQLDY 480
              +M + +WDEMK KG  P  + ++  I  L  + +  EA +Y  EM+D G++ P   +
Sbjct: 423 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 482

Query: 481 NKFAADFSRAGRPDILEELAQKM 503
           ++        GR D + +L  KM
Sbjct: 483 SRLKQTLLDEGRKDKVTDLVVKM 500

[Close]

BLAST of HG10006350 vs. TAIR 10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 1.6e-68
Identity = 142/460 (30.87%), Postives = 256/460 (55.65%), Query Frame = 0


Query: 45  CGKSEDDYRECDSRADSTEVDRVCKVIDELFALDRN--MEAVLDECGIKLSHDLVLEVLA 104
           C KS    R   S     +V  V K I ++        +++ LD+ G+++S ++V +VL 
Sbjct: 49  CCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLN 108

Query: 105 RFKQARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTM 164
           RF+ A    +RFF W+ ++  + H  + Y+MM+    K RQ++ M  L+  M +K++L +
Sbjct: 109 RFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNV 168

Query: 165 ETFTICFKAFATAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQVFFEK 224
           ETF I  + +A A++  +A+  F +M+KY     +   N LL +L ++K  ++AQ  FE 
Sbjct: 169 ETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN 228

Query: 225 LHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGLLRCKKR 284
           +  RFTP+ +TY++LL GW +  NL +A +++ +MID G  PDIV ++ M++ L +  + 
Sbjct: 229 MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288

Query: 285 SDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQTKMKEAVEYFEEMQGAGCRPDAGIYTCL 344
            +A+ +   M      P    Y++LV  +  + +++EAV+ F EM+ +G + D  ++  L
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348

Query: 345 ITGFGNQKRMDMVYELLKEMKTNGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMVENGI 404
           I  F    RM  VY +LKEMK+ G  P+ K+ N +++ +  +   D+A  +++KM++   
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VC 408

Query: 405 EPTIHTYNMMMKSYFQTRNYEMGVAVWDEMKQKGCCPDDNSYTVFIGGLISQGRCGEAGK 464
           EP   TY M++K + + +  E    VW  M++KG  P  ++++V I GL  +    +A  
Sbjct: 409 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 468

Query: 465 YLEEMIDKGMKAPQLDYNKFAADFSRAGRPDILEELAQKM 503
            LEEMI+ G++   + + +      +  R D+L+ L +KM
Sbjct: 469 LLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507

The following BLAST results are available for this feature:

BLAST of HG10006350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890736.1	2.1e-304	95.18	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Benin...	[more]
KAA0048071.1	9.2e-292	92.39	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ96465...	[more]
XP_008453445.1	6.6e-290	91.65	PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-...	[more]
XP_022156436.1	4.7e-288	91.45	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Momor...	[more]
XP_004144748.1	2.2e-285	91.13	pentatricopeptide repeat-containing protein At3g62470, mitochondrial [Cucumis sa...	[more]

BLAST of HG10006350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZP3	3.4e-212	69.79	Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop...	[more]
Q9LEQ7	7.5e-212	69.98	Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop...	[more]
Q3EAF8	6.3e-211	69.79	Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop...	[more]
Q9C9A2	9.8e-71	30.47	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]
Q9FVX2	2.3e-67	30.87	Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop...	[more]

BLAST of HG10006350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDC8	4.4e-292	92.39	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BWC0	3.2e-290	91.65	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc...	[more]
A0A6J1DUY7	2.3e-288	91.45	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Mom...	[more]
A0A0A0LK05	1.1e-285	91.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034550 PE=4 SV=1	[more]
A0A6J1FBQ0	2.1e-281	88.87	pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc...	[more]

BLAST of HG10006350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62470.1	2.4e-213	69.79	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G14820.1	5.3e-213	69.98	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G62540.1	4.5e-212	69.79	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G71060.1	7.0e-72	30.47	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G77360.1	1.6e-68	30.87	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 294..361 e-value: 2.5E-19 score: 71.5 coord: 223..293 e-value: 1.8E-15 score: 59.0 coord: 68..222 e-value: 1.8E-18 score: 68.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 362..536 e-value: 2.7E-35 score: 124.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 334..379 e-value: 1.3E-11 score: 44.5 coord: 404..451 e-value: 5.9E-13 score: 48.8 coord: 264..313 e-value: 1.6E-13 score: 50.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 407..440 e-value: 1.5E-10 score: 38.6 coord: 130..157 e-value: 5.7E-5 score: 21.0 coord: 303..336 e-value: 7.2E-7 score: 27.0 coord: 267..301 e-value: 7.0E-5 score: 20.8 coord: 338..370 e-value: 6.0E-8 score: 30.4 coord: 373..405 e-value: 3.2E-8 score: 31.3 coord: 233..266 e-value: 1.2E-7 score: 29.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 130..157 e-value: 0.0022 score: 18.1 coord: 233..262 e-value: 2.6E-4 score: 21.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 230..264 score: 11.816339
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 265..299 score: 10.873667
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 335..369 score: 11.301158
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 370..404 score: 12.221907
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 300..334 score: 12.199985
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 405..439 score: 11.904029
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 440..474 score: 9.251395
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 127..161 score: 9.514466
None	No IPR available	PANTHER	PTHR47942:SF48	OS05G0355200 PROTEIN	coord: 35..532
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 35..532
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 217..433

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006350.1	HG10006350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding