Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTGCTATCAAAATCTTACCTCTTTCATCCCTGCTCTTCTTTTGGCAGCTTTTTCCCTAACAATTTTCCCTTCTCATGGAATCCCCCATGAAAATCTGGTCACCATTTGCTCTAAAACCTCCAATCCGTCGCTCTGCCAGAAAATCCTTAAGAACGATTCTCGTACCGTCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCAGCAATCTGACAAAGAAACAAGCAGATCAAAACCTTGATTTCTTCTCCAAACTAAGTGAGAATGAGAGTGATCCTGAGCAGAAGAAAAGTTTTGAGCATTGTGTGGAGTATTACCATGAAATTCAAGCAAATATCCAGAAAGCTTATCAGTTCTCACAGCAGAGGATCTTCAGATACAATAGTCCATTGGTAGCATCAAAGAAACTTGTTCTAAGGTGTAGTCAAGCCATTAGAATCAACTCATTGCGTATTGAAGTCATGAACAAACTTATGATCCTATGCTGTGATATTTCAATAAGTGTAAATCAATGTGCTGTTGCTAATGGCCACATTTAG
mRNA sequence
ATGGATTGCTATCAAAATCTTACCTCTTTCATCCCTGCTCTTCTTTTGGCAGCTTTTTCCCTAACAATTTTCCCTTCTCATGGAATCCCCCATGAAAATCTGGTCACCATTTGCTCTAAAACCTCCAATCCGTCGCTCTGCCAGAAAATCCTTAAGAACGATTCTCGTACCGTCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCAGCAATCTGACAAAGAAACAAGCAGATCAAAACCTTGATTTCTTCTCCAAACTAAGTGAGAATGAGAGTGATCCTGAGCAGAAGAAAAGTTTTGAGCATTGTGTGGAGTATTACCATGAAATTCAAGCAAATATCCAGAAAGCTTATCAGTTCTCACAGCAGAGGATCTTCAGATACAATAGTCCATTGGTAGCATCAAAGAAACTTGTTCTAAGGTGTAGTCAAGCCATTAGAATCAACTCATTGCGTATTGAAGTCATGAACAAACTTATGATCCTATGCTGTGATATTTCAATAAGTGTAAATCAATGTGCTGTTGCTAATGGCCACATTTAG
Coding sequence (CDS)
ATGGATTGCTATCAAAATCTTACCTCTTTCATCCCTGCTCTTCTTTTGGCAGCTTTTTCCCTAACAATTTTCCCTTCTCATGGAATCCCCCATGAAAATCTGGTCACCATTTGCTCTAAAACCTCCAATCCGTCGCTCTGCCAGAAAATCCTTAAGAACGATTCTCGTACCGTCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCAGCAATCTGACAAAGAAACAAGCAGATCAAAACCTTGATTTCTTCTCCAAACTAAGTGAGAATGAGAGTGATCCTGAGCAGAAGAAAAGTTTTGAGCATTGTGTGGAGTATTACCATGAAATTCAAGCAAATATCCAGAAAGCTTATCAGTTCTCACAGCAGAGGATCTTCAGATACAATAGTCCATTGGTAGCATCAAAGAAACTTGTTCTAAGGTGTAGTCAAGCCATTAGAATCAACTCATTGCGTATTGAAGTCATGAACAAACTTATGATCCTATGCTGTGATATTTCAATAAGTGTAAATCAATGTGCTGTTGCTAATGGCCACATTTAG
Protein sequence
MDCYQNLTSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTSNPSLCQKILKNDSRTVSADLPKLSLISSNLTKKQADQNLDFFSKLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQFSQQRIFRYNSPLVASKKLVLRCSQAIRINSLRIEVMNKLMILCCDISISVNQCAVANGHI
Homology
BLAST of HG10006337 vs. NCBI nr
Match:
KAA0048111.1 (pectinesterase inhibitor [Cucumis melo var. makuwa])
HSP 1 Score: 311.6 bits (797), Expect = 4.4e-81
Identity = 161/180 (89.44%), Postives = 167/180 (92.78%), Query Frame = 0
Query: 1 MDCYQNLTSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTSNPSLCQKILKNDSRTVSA 60
M+C NLTSFIPALLLA FSLTIFPSHGIPHENLVTICSKTSNPSLC+KIL NDSRTVSA
Sbjct: 1 MNCCLNLTSFIPALLLATFSLTIFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
Query: 61 DLPKLSLISSNLTKKQADQNLDFFSKLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQF 120
DLPKLSLI SNL KKQADQNLD F KLS+NESDPE KKSFEHCVEYYHEIQ+NIQKAYQF
Sbjct: 61 DLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEVKKSFEHCVEYYHEIQSNIQKAYQF 120
Query: 121 SQQRIFRYNSPLVASKKLVLRCSQAIRINSLRIEVMNKLMILCCDISISVNQCAVANGHI 180
SQQ+IFR N PLVASK+LVLRCSQAIRINSL IEVMNKLMILCCDISISVNQCA ANGHI
Sbjct: 121 SQQKIFRENGPLVASKRLVLRCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHI 180
BLAST of HG10006337 vs. NCBI nr
Match:
KAE8651630.1 (hypothetical protein Csa_021165 [Cucumis sativus])
HSP 1 Score: 307.8 bits (787), Expect = 6.3e-80
Identity = 157/179 (87.71%), Postives = 168/179 (93.85%), Query Frame = 0
Query: 1 MDCYQNLTSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTSNPSLCQKILKNDSRTVSA 60
M+C NLTSFIPALLLAAFSLT+FPSHGIPHENLVTICSKTSNPSLC+KIL NDSRTVSA
Sbjct: 490 MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 549
Query: 61 DLPKLSLISSNLTKKQADQNLDFFSKLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQF 120
+LPKLSLI SNL KKQADQNLD F KLS+NESDPE+KKSFEHCV+YYHEIQ+NIQKAYQF
Sbjct: 550 NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF 609
Query: 121 SQQRIFRYNSPLVASKKLVLRCSQAIRINSLRIEVMNKLMILCCDISISVNQCAVANGH 180
SQQ+IFR N PLVASK+LVL+CSQAIRINSL IEVMNKLMILCCDISISVNQCA ANGH
Sbjct: 610 SQQKIFRENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILCCDISISVNQCAAANGH 668
BLAST of HG10006337 vs. NCBI nr
Match:
KAG6599172.1 (hypothetical protein SDJN03_08950, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030110.1 hypothetical protein SDJN02_08457, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 231.9 bits (590), Expect = 4.4e-57
Identity = 125/170 (73.53%), Postives = 139/170 (81.76%), Query Frame = 0
Query: 11 IPALLLAAFSLTIFPSHGIPHENLVTICSKTSNPSLCQKILKNDSRTVSADLPKLSLISS 70
IP LLLA F L IFPSHGI H NL TIC KT +P CQ+IL N T+SADLPKLSLIS
Sbjct: 7 IPVLLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLISI 66
Query: 71 NLTKKQADQNLDFFSKLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQFSQQRIFRYNS 130
NLTK QADQNLD FSKLS+NESDPE KKSF+HCV+YYHEIQA+IQKA++ S+++IFR N
Sbjct: 67 NLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDNH 126
Query: 131 PLVASKKLVLRCSQAIRINSLRIEVMNKLMILCCDISISVNQCAVANGHI 181
PLV SKKLV RC+QAIRINSL IEVMNK MIL CDIS+SVN A AN HI
Sbjct: 127 PLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAHI 176
BLAST of HG10006337 vs. NCBI nr
Match:
KAB1201343.1 (Pectinesterase inhibitor [Morella rubra] >KAB1224060.1 Pectinesterase inhibitor [Morella rubra])
HSP 1 Score: 134.8 bits (338), Expect = 7.4e-28
Identity = 77/165 (46.67%), Postives = 104/165 (63.03%), Query Frame = 0
Query: 8 TSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTSNPSLCQKILKNDSRTVSADLPKLSL 67
T + +L+ S I+PS G+ H+ L TICSKT N C++ L++DSRT SADLPKLSL
Sbjct: 5 TLAVSVTVLSVASFLIYPSSGVSHDILTTICSKTQNHDACERSLESDSRTRSADLPKLSL 64
Query: 68 ISSNLTKKQADQNLDFFSKLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQFSQQRIFR 127
IS LT KQAD N FS L +N +DP + SF +CV +Y E+QA I+ AY SQ+R ++
Sbjct: 65 ISIELTMKQADHNHRTFSDLRDNATDPRLEDSFRNCVGFYKEMQAQIRAAYHLSQKRQYQ 124
Query: 128 YNSPLVASKKLVLRCSQAIRINSLRIEVMNKLMILCCDISISVNQ 173
+ LV S++L C+ I IN L I+ + M+L S SVNQ
Sbjct: 125 KITELVQSERLAQECASGIPINCLEIDALTTTMLLAIKTSESVNQ 169
BLAST of HG10006337 vs. NCBI nr
Match:
XP_007031213.2 (PREDICTED: pectinesterase inhibitor [Theobroma cacao])
HSP 1 Score: 128.6 bits (322), Expect = 5.3e-26
Identity = 76/170 (44.71%), Postives = 105/170 (61.76%), Query Frame = 0
Query: 7 LTSFIPAL----LLAAFSLTIFPSHGIPHENLVTICSKTSNPSLCQKILKNDSRTVSADL 66
+ S+ P L LL AFS+ I PS +P+E LV ICSKT NP LC+ IL+ D RT SADL
Sbjct: 1 MASYTPRLLALTLLVAFSV-IHPSSSVPNETLVAICSKTYNPILCESILRGDPRTSSADL 60
Query: 67 PKLSLISSNLTKKQADQNLDFFSKLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQFSQ 126
P+LSL+S NLT +QA N F + +N +DP KK F CVE Y ++ N+ KAY S+
Sbjct: 61 PELSLVSINLTIEQAANNSQVFVEFHDNTTDPALKKGFNSCVELYQLMEDNLDKAYHRSE 120
Query: 127 QRIFRYNSPLVASKKLVLRCSQAIRINSLRIEVMNKLMILCCDISISVNQ 173
+R + LV S + C+ A+ IN + I+ + + ++ C+ SISVNQ
Sbjct: 121 GGDYRNITELVQSSNQAVECASALAINLVTIDALTRAVVSKCETSISVNQ 169
BLAST of HG10006337 vs. ExPASy Swiss-Prot
Match:
P83326 (Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2)
HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06
Identity = 37/119 (31.09%), Postives = 60/119 (50.42%), Query Frame = 0
Query: 4 YQNLTSFIPALLLAAFSLTIFPSHGIPHEN--LVTICSKTSNPSLCQKILKNDSRTVSAD 63
Y + + F+ LL+ F + + EN + IC KT NPSLC + L++D R+ S D
Sbjct: 5 YCSSSLFVSLLLVILFISPLSQRPSVKAENHLISEICPKTRNPSLCLQALESDPRSASKD 64
Query: 64 LPKLSLISSNLTKKQADQNLDFFSKLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQF 121
L L S ++ + A Q + L+ +DP+ K +E C E Y + ++ +A QF
Sbjct: 65 LKGLGQFSIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYADAIDSLGQAKQF 123
BLAST of HG10006337 vs. ExPASy TrEMBL
Match:
A0A5A7U3I1 (Pectinesterase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001900 PE=4 SV=1)
HSP 1 Score: 311.6 bits (797), Expect = 2.1e-81
Identity = 161/180 (89.44%), Postives = 167/180 (92.78%), Query Frame = 0
Query: 1 MDCYQNLTSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTSNPSLCQKILKNDSRTVSA 60
M+C NLTSFIPALLLA FSLTIFPSHGIPHENLVTICSKTSNPSLC+KIL NDSRTVSA
Sbjct: 1 MNCCLNLTSFIPALLLATFSLTIFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
Query: 61 DLPKLSLISSNLTKKQADQNLDFFSKLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQF 120
DLPKLSLI SNL KKQADQNLD F KLS+NESDPE KKSFEHCVEYYHEIQ+NIQKAYQF
Sbjct: 61 DLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEVKKSFEHCVEYYHEIQSNIQKAYQF 120
Query: 121 SQQRIFRYNSPLVASKKLVLRCSQAIRINSLRIEVMNKLMILCCDISISVNQCAVANGHI 180
SQQ+IFR N PLVASK+LVLRCSQAIRINSL IEVMNKLMILCCDISISVNQCA ANGHI
Sbjct: 121 SQQKIFRENGPLVASKRLVLRCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHI 180
BLAST of HG10006337 vs. ExPASy TrEMBL
Match:
A0A0A0LK13 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G034700 PE=4 SV=1)
HSP 1 Score: 306.2 bits (783), Expect = 8.9e-80
Identity = 156/179 (87.15%), Postives = 167/179 (93.30%), Query Frame = 0
Query: 1 MDCYQNLTSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTSNPSLCQKILKNDSRTVSA 60
M+C NLTSFIPALLLAAFSLT+FPSHGIPHENLVTICSKTSNPSLC+KIL NDSRTVSA
Sbjct: 1 MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
Query: 61 DLPKLSLISSNLTKKQADQNLDFFSKLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQF 120
+LPKLSLI SNL KKQADQNLD F KLS+NESDPE+KKSFEHCV+YYHEIQ+NIQKAYQF
Sbjct: 61 NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF 120
Query: 121 SQQRIFRYNSPLVASKKLVLRCSQAIRINSLRIEVMNKLMILCCDISISVNQCAVANGH 180
SQQ+IFR N PLVASK+LVL+CSQ IRINSL IEVMNKLMILCCDISISVNQCA ANGH
Sbjct: 121 SQQKIFRENGPLVASKRLVLKCSQTIRINSLYIEVMNKLMILCCDISISVNQCAAANGH 179
BLAST of HG10006337 vs. ExPASy TrEMBL
Match:
A0A6A1UMD5 (Pectinesterase inhibitor OS=Morella rubra OX=262757 GN=CJ030_MR0G004165 PE=4 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 3.6e-28
Identity = 77/165 (46.67%), Postives = 104/165 (63.03%), Query Frame = 0
Query: 8 TSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTSNPSLCQKILKNDSRTVSADLPKLSL 67
T + +L+ S I+PS G+ H+ L TICSKT N C++ L++DSRT SADLPKLSL
Sbjct: 5 TLAVSVTVLSVASFLIYPSSGVSHDILTTICSKTQNHDACERSLESDSRTRSADLPKLSL 64
Query: 68 ISSNLTKKQADQNLDFFSKLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQFSQQRIFR 127
IS LT KQAD N FS L +N +DP + SF +CV +Y E+QA I+ AY SQ+R ++
Sbjct: 65 ISIELTMKQADHNHRTFSDLRDNATDPRLEDSFRNCVGFYKEMQAQIRAAYHLSQKRQYQ 124
Query: 128 YNSPLVASKKLVLRCSQAIRINSLRIEVMNKLMILCCDISISVNQ 173
+ LV S++L C+ I IN L I+ + M+L S SVNQ
Sbjct: 125 KITELVQSERLAQECASGIPINCLEIDALTTTMLLAIKTSESVNQ 169
BLAST of HG10006337 vs. ExPASy TrEMBL
Match:
A0A061F340 (PMEI domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_026801 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 7.4e-26
Identity = 75/170 (44.12%), Postives = 104/170 (61.18%), Query Frame = 0
Query: 7 LTSFIPAL----LLAAFSLTIFPSHGIPHENLVTICSKTSNPSLCQKILKNDSRTVSADL 66
+ S+ P L LL AFS+ I PS +P+E LV ICSKT NP LC IL+ D RT SADL
Sbjct: 1 MASYTPRLLALTLLVAFSV-IHPSSSVPNETLVAICSKTYNPILCASILRGDPRTSSADL 60
Query: 67 PKLSLISSNLTKKQADQNLDFFSKLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQFSQ 126
P+LSL+S NLT +QA N F + +N +DP KK F CVE Y ++ N+ KAY S+
Sbjct: 61 PELSLVSINLTIEQAANNSQVFVEFHDNTTDPALKKGFNSCVELYQLMEDNLDKAYHRSE 120
Query: 127 QRIFRYNSPLVASKKLVLRCSQAIRINSLRIEVMNKLMILCCDISISVNQ 173
+R + LV S + C+ A+ IN + I+ + + ++ C+ S+SVNQ
Sbjct: 121 GGDYRNITELVQSSNQAVECASALAINLVTIDALTRAVVSKCETSVSVNQ 169
BLAST of HG10006337 vs. ExPASy TrEMBL
Match:
A0A5E4G0J4 (PREDICTED: pectinesterase inhibitor OS=Prunus dulcis OX=3755 GN=ALMOND_2B005171 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 2.2e-22
Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = 0
Query: 26 SHGIPHENLVTICSKTSNPSLCQKILKNDSRTVSADLPKLSLISSNLTKKQADQNLDFFS 85
S G+ ++ L ICSKT NP C L+ T SADLP+LSLIS L KQADQNL+ F
Sbjct: 22 SFGVSYKTLTKICSKTQNPKTCMTNLQTVPCTTSADLPELSLISIELAGKQADQNLETFR 81
Query: 86 KLSENESDPEQKKSFEHCVEYYHEIQANIQKAYQFSQQRIFRYNSPLVASKKLVLRCSQA 145
+LS N + + K+ F+ CV +Y E++ IQ A+ SQ+R + NS L+ + + LRCS
Sbjct: 82 ELSHNATAAKMKEEFDTCVRFYKEVRPQIQAAHLLSQKRQYENNSALLQANEFALRCSLG 141
Query: 146 IRINSLRIEVMNKLMILCCDISISVNQ 173
I ++SL I + + ++L D SISVN+
Sbjct: 142 ISVDSLEINQLQESVLLKLDTSISVNR 168
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0048111.1 | 4.4e-81 | 89.44 | pectinesterase inhibitor [Cucumis melo var. makuwa] | [more] |
KAE8651630.1 | 6.3e-80 | 87.71 | hypothetical protein Csa_021165 [Cucumis sativus] | [more] |
KAG6599172.1 | 4.4e-57 | 73.53 | hypothetical protein SDJN03_08950, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAB1201343.1 | 7.4e-28 | 46.67 | Pectinesterase inhibitor [Morella rubra] >KAB1224060.1 Pectinesterase inhibitor ... | [more] |
XP_007031213.2 | 5.3e-26 | 44.71 | PREDICTED: pectinesterase inhibitor [Theobroma cacao] | [more] |
Match Name | E-value | Identity | Description | |
P83326 | 1.3e-06 | 31.09 | Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7U3I1 | 2.1e-81 | 89.44 | Pectinesterase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A0A0LK13 | 8.9e-80 | 87.15 | PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G034700 PE=4 S... | [more] |
A0A6A1UMD5 | 3.6e-28 | 46.67 | Pectinesterase inhibitor OS=Morella rubra OX=262757 GN=CJ030_MR0G004165 PE=4 SV=... | [more] |
A0A061F340 | 7.4e-26 | 44.12 | PMEI domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_026801 PE=4 SV=... | [more] |
A0A5E4G0J4 | 2.2e-22 | 44.22 | PREDICTED: pectinesterase inhibitor OS=Prunus dulcis OX=3755 GN=ALMOND_2B005171 ... | [more] |
Match Name | E-value | Identity | Description | |