HG10006225 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCAGCTGCCCCCGCCACGACGTGGCATTCGCCATTGCCGTACTTATTCGGCGCCCTTGCCGTCGTATCTATTCTTATCTCCTTTTCTCTATTGATCCTTGGCTGCTCTTATTGCCGGAAGGTTTCTGTATCTGTATTGAACGGCAACGGTGGTGCTGCTCGAGCTGCTGATGTGGAGTCCGATCGAGGCAAAGACGATGATAATCGGAATCTGCTGCCATCCGCGGTGTTTGACGACAAGATATTGGTAATAATGGCTGGAGAAGTTAACCCAAGTTTTATAGCTACTCCCATGTCGTTGAGTTTAAATTGTAATAAAATTATGGGTTGCCGTGAAAAGGCAGCCGCGACCGCGGTGGCGGCAGAGCATGGTGATGGGTGA ATGGAGGCAGCTGCCCCCGCCACGACGTGGCATTCGCCATTGCCGTACTTATTCGGCGCCCTTGCCGTCGTATCTATTCTTATCTCCTTTTCTCTATTGATCCTTGGCTGCTCTTATTGCCGGAAGGTTTCTGTATCTGTATTGAACGGCAACGGTGGTGCTGCTCGAGCTGCTGATGTGGAGTCCGATCGAGGCAAAGACGATGATAATCGGAATCTGCTGCCATCCGCGGTGTTTGACGACAAGATATTGGTAATAATGGCTGGAGAAGTTAACCCAAGTTTTATAGCTACTCCCATGTCGTTGAGTTTAAATTGTAATAAAATTATGGGTTGCCGTGAAAAGGCAGCCGCGACCGCGGTGGCGGCAGAGCATGGTGATGGGTGA ATGGAGGCAGCTGCCCCCGCCACGACGTGGCATTCGCCATTGCCGTACTTATTCGGCGCCCTTGCCGTCGTATCTATTCTTATCTCCTTTTCTCTATTGATCCTTGGCTGCTCTTATTGCCGGAAGGTTTCTGTATCTGTATTGAACGGCAACGGTGGTGCTGCTCGAGCTGCTGATGTGGAGTCCGATCGAGGCAAAGACGATGATAATCGGAATCTGCTGCCATCCGCGGTGTTTGACGACAAGATATTGGTAATAATGGCTGGAGAAGTTAACCCAAGTTTTATAGCTACTCCCATGTCGTTGAGTTTAAATTGTAATAAAATTATGGGTTGCCGTGAAAAGGCAGCCGCGACCGCGGTGGCGGCAGAGCATGGTGATGGGTGA MEAAAPATTWHSPLPYLFGALAVVSILISFSLLILGCSYCRKVSVSVLNGNGGAARAADVESDRGKDDDNRNLLPSAVFDDKILVIMAGEVNPSFIATPMSLSLNCNKIMGCREKAAATAVAAEHGDG Homology
BLAST of HG10006225 vs. NCBI nr
Match: XP_038891043.1 (protein GLUTAMINE DUMPER 1-like [Benincasa hispida]) HSP 1 Score: 214.5 bits (545), Expect = 5.2e-52 Identity = 112/129 (86.82%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of HG10006225 vs. NCBI nr
Match: XP_008460400.1 (PREDICTED: protein GLUTAMINE DUMPER 1-like [Cucumis melo] >KAA0055617.1 protein GLUTAMINE DUMPER 1-like [Cucumis melo var. makuwa] >TYK24452.1 protein GLUTAMINE DUMPER 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 161.4 bits (407), Expect = 5.2e-36 Identity = 85/114 (74.56%), Postives = 92/114 (80.70%), Query Frame = 0
BLAST of HG10006225 vs. NCBI nr
Match: XP_023537956.1 (protein GLUTAMINE DUMPER 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 156.0 bits (393), Expect = 2.2e-34 Identity = 83/126 (65.87%), Postives = 95/126 (75.40%), Query Frame = 0
BLAST of HG10006225 vs. NCBI nr
Match: XP_022938322.1 (protein GLUTAMINE DUMPER 2-like [Cucurbita moschata]) HSP 1 Score: 151.0 bits (380), Expect = 7.0e-33 Identity = 80/126 (63.49%), Postives = 92/126 (73.02%), Query Frame = 0
BLAST of HG10006225 vs. NCBI nr
Match: KAG6586067.1 (Protein GLUTAMINE DUMPER 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 151.0 bits (380), Expect = 7.0e-33 Identity = 80/126 (63.49%), Postives = 92/126 (73.02%), Query Frame = 0
BLAST of HG10006225 vs. ExPASy Swiss-Prot
Match: Q9FHH5 (Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana OX=3702 GN=GDU3 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.2e-12 Identity = 43/102 (42.16%), Postives = 59/102 (57.84%), Query Frame = 0
BLAST of HG10006225 vs. ExPASy Swiss-Prot
Match: Q9SW07 (Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana OX=3702 GN=GDU2 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-11 Identity = 44/99 (44.44%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of HG10006225 vs. ExPASy Swiss-Prot
Match: O81775 (Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana OX=3702 GN=GDU1 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.9e-11 Identity = 44/119 (36.97%), Postives = 61/119 (51.26%), Query Frame = 0
BLAST of HG10006225 vs. ExPASy Swiss-Prot
Match: Q8S8A0 (Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana OX=3702 GN=GDU4 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10 Identity = 42/101 (41.58%), Postives = 58/101 (57.43%), Query Frame = 0
BLAST of HG10006225 vs. ExPASy Swiss-Prot
Match: Q3E965 (Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana OX=3702 GN=GDU5 PE=2 SV=2) HSP 1 Score: 64.7 bits (156), Expect = 8.7e-10 Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 0
BLAST of HG10006225 vs. ExPASy TrEMBL
Match: A0A5A7UM11 (Protein GLUTAMINE DUMPER 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00070 PE=3 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 2.5e-36 Identity = 85/114 (74.56%), Postives = 92/114 (80.70%), Query Frame = 0
BLAST of HG10006225 vs. ExPASy TrEMBL
Match: A0A1S3CDN6 (protein GLUTAMINE DUMPER 1-like OS=Cucumis melo OX=3656 GN=LOC103499225 PE=3 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 2.5e-36 Identity = 85/114 (74.56%), Postives = 92/114 (80.70%), Query Frame = 0
BLAST of HG10006225 vs. ExPASy TrEMBL
Match: A0A0A0LMC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058100 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 9.6e-36 Identity = 82/104 (78.85%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of HG10006225 vs. ExPASy TrEMBL
Match: A0A6J1FDQ8 (protein GLUTAMINE DUMPER 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444458 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.4e-33 Identity = 80/126 (63.49%), Postives = 92/126 (73.02%), Query Frame = 0
BLAST of HG10006225 vs. ExPASy TrEMBL
Match: A0A6J1I0C5 (protein GLUTAMINE DUMPER 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468569 PE=3 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.4e-31 Identity = 77/126 (61.11%), Postives = 89/126 (70.63%), Query Frame = 0
BLAST of HG10006225 vs. TAIR 10
Match: AT5G57685.1 (glutamine dumper 3 ) HSP 1 Score: 72.8 bits (177), Expect = 2.3e-13 Identity = 43/102 (42.16%), Postives = 59/102 (57.84%), Query Frame = 0
BLAST of HG10006225 vs. TAIR 10
Match: AT4G25760.1 (glutamine dumper 2 ) HSP 1 Score: 70.9 bits (172), Expect = 8.6e-13 Identity = 44/99 (44.44%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of HG10006225 vs. TAIR 10
Match: AT4G31730.1 (glutamine dumper 1 ) HSP 1 Score: 68.2 bits (165), Expect = 5.6e-12 Identity = 44/119 (36.97%), Postives = 61/119 (51.26%), Query Frame = 0
BLAST of HG10006225 vs. TAIR 10
Match: AT2G24762.1 (glutamine dumper 4 ) HSP 1 Score: 67.8 bits (164), Expect = 7.3e-12 Identity = 42/101 (41.58%), Postives = 58/101 (57.43%), Query Frame = 0
BLAST of HG10006225 vs. TAIR 10
Match: AT5G24920.1 (glutamine dumper 5 ) HSP 1 Score: 64.7 bits (156), Expect = 6.2e-11 Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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