HG10006222 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006222
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Chlorophyll A-B binding protein
Location	Chr07: 15998815 .. 16004793 (+)
RNA-Seq Expression	HG10006222
Synteny	HG10006222

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGCACCTGAAATCTATAAATGGATAAGTTTTCATGTAAGAACCCGCTTCACTTTGGAGATGGCTTCCACTGCGCTGATTCTCCCCATCAAAGGACGGAACCTTCCGCCTTCTCAGTACCTGTCTTTCCGCCATACCCATCCTTCTGCTACTTTCTCCAGGTAATTTCGGGTTCTTCCTCAAATACCCATTTCTCCAATCGATGTAATTGATGGGGTTTCCCCCTTTTTCATCTCATGTGATTATATCTGTGTAATTGGGGTTTCTTTTCTTGCTTTTCATAAACCATGATTTTCTTTGTTTAATTGGAGCTTTGTGTCTAAACTTTTGTATGTTGTTAAAGTCTTTGCTCCAAATGGTGTTTGATGGTTTCTGGTAAATGTTACGAGCTACAGAGTGATAAATAAAAGCTTGTATTTCCCTTTTTAGGATTGATTTGATTGGAGTTTGAATTGCTCTGAGATGTGTTGGAATTTTTGTGTTCCGTGCTCTGATTATTGGTTAAGCCATTTAGATTTTCCCTGTTCTGATTTAGTTCGTCATGCTTTGAGAAGTCTGGTGCTTACTTTCATGAGTTGGGGACCTAGCTTAATGCTTCTTTTTGTATATGTCTGGTTGTTAAGTTTTTTCTCTGCTTGTTTTCGTTTTTTTTTGTAAGTGGGTAATGGAGCTTCTCTCCTTGCTTGCTCATGGCCACTAGTCGTCTCTGGAAGGCTTCGTCCACTTGAACAGCTCTAGGCAAAAACAGGGTTTTGAGTCATCCCGATTGATAACCATTTGGATTTTGATTTTTTGGGTTTTCAAAATTAAGCTTATTAAGTTTCTTTGTTTTGTTATTCATCTCCAATAATGTTTTAAAAAAGGAAGCCAAGTTTTGAAAACTTAAAAAATGTTAGTTTTTACTTGTTTTTGTTTTTCGGATTCAACTAAGAATTCACCATTTCTTAAAAACTGACAACCGTAGTGAGTTTCAGAAATAGAAAACTAAAAATGAAATCGTTACTAAACGGGGCCTAAACTTTCGTCCTAGGCAATTAAACCGTAAACTTTGTAGGGTATGTCTAAACATTCCGAGTAAGTAATAATTAATTTTGCATTACTCGTGTTTGAAACATGCCACGTGTTTTGACGTTTTCCCTTCAATGTTGATCCACTACTGATACGAAAAATTAGGTGGTTGTTGTACTTTGATCAGAAAGAATGTTATCTCTTTAGATTTGAGTTACAAATAGGATCAGATAAGAATGCTAATCACCAAGAAACTTATATAAAAGCTCTAAATGAGTGTTAAAAAATAAACCAGTACAGCTAGCCTGGTCGTCTCCTATTGTGAGCCTTCTTCACGGCTCTGTCTTACTGTAACCCTTGCTCTTTGTACATTCCTTCTGTGAAGGGGTCCCTTCTTTTCTCTAGCTGGTGGTTATAAATACACAGCATAATAAAGAAGGCTCTCCAGAATTTCGAGCTGAACACTCACGTGTCCGACGCTTACCTTGGAGAGGGCACTCCAGCCTTTTCAAGTGCCCCAAGTTGGCAAAATAAAAATTTATGGAACTTCCCTAAAAAATTTTTAATAGCTAAGTAAGACCTATATTAGATGCCCCCCCAGGCCGAACAAAAGAGGGGAGGCGAGGACTTCCCCCTAAGGACCAAGTGGATACAAAAAGGAGATCCAATTGATCAAGGTATGTACAAACTCATAATTACAAAAAGAATTTGAAGGAAAACACCAGACGGTAGTGAAGAGATGAATGGAATCCCAAATTTGGTCCAGTCTCGAGAACTTCTATTTGAAGACCCTTTGATTTCTCTAAAACCATAACCTTCAAATATTAGCATAAACACATTAGTTCACAAACCTTGGCTATACTTTTGAAGAGTCAACCCCCAGCTGAATTATATCCTCACTAATAGAGTCGGGAAACCACCACTGCAAGCTGAAAGTCTGGAAAAGATTAGCCCAATGGCTACTGGCGACAGCACAGTGTAAGAAGATGCTCGTGGTTTTCCAACCCGTCATTACACAAAATACACAGCTATGAGCTAAACAAAGTCTTGGATTCTTCTTTGTAGCAGATCATTAGTATTTTGTTTTGTTTGGATACACACCCTCACGAAAACTTTCACCTTCTTCGACACCTTGGCTTTTCAAATGATGTCAACTAGGATCGGGTCAAAAGGAGCATGATTGGGAGAGGACCGGAGTTAACGAGCTGACTGAAAACACCCCATTTTGGTGGAGAGCGCAAACTGTAATTGATAAAAGGGAAAGACATGTTTATGCCAATATGATTATGAAGCAAGAAGAAGGATGTTGTCAACTAAACCTTCAAAAGTTCCTTCTTTGTCCTGAAAAATTTTCGTTTTCCTTTCATTCTAAATTAACCCCAAAATAATCCTTGTTGATATTGATCCAAAGCATCTGTTTCTCCCCTTTGAATGGATGATCAAACAAGAGTGAGCCAAACTTCTAGATTGAAAGGAGGCAAGACAGACCAATTAAAGCTGATTGAACATGCACCCAAATTCTATTTATTAAAAGCTATGACTCTATATTAGAATTGCATGGAGTACTAAAATATTGTCTCGTTTACTTTTGAGCCATGTCTCCAAAAGAATGCTTATTAATTATTAATTTTTAACTAAATGTTCCAAATTATAGCCTAAAAATTGAATTTTTAGAATTTTTTCGCCCTTTCCTGTTAGTTGATGACTAGCAAAATAACTTAAATAGTTGGATACAAGTTTCAACACATTACATGCTGCCTGGTCATGGGAAATGTTAGAACTCTAGTTTTTGAAGTATCATTTAACAAATAGTTAGAAGCAAAGACCTAGAAAGGAAGTGAAACAATATTCAATAAATTTGTTTAATTTATTTTCCATCTTGATCCTTATTTATTTACTTAAAAAAAAAAATTCGCTGCTAATTGCTGCATCATTCTTGATAGTTCCTTTCCCTTCCAGGTGGGGTTGGAGTAGGGACCAAAATGCTGGCAAATGTACTCACAGAACGAGGGGTCAAGCATTTCAAATCTCTAATGTATGCTTCAACTCAAGCCTTCTACATGTTTAATAGCAATATATTTTTTTTGAATATGGTCGAAGATTTTGTAGGTATGTCATTAGAAATTAATTAGTGCGGCTTCTTTATGGTAACATATAGCTGCAATGTATTCCTTACAGTGTAGTACAGTAACCCCTTCATTATATTTAACTTGAATGTTTTATTCTTGTTCTCCCAATGAAAGTCACTTTCTAGTTGTTTATGAGTTTTTGTTCTGCAACTAACATATATCATGCCAATTGTTCAGGCCTCTCCTGGTAAAGATGGCTTAATCAAGCAGGTGATTATGGTTGACCCTTTGGAAGCCAAACGTATGGCAGCAAAAGAAATGGAAAAGATCAAAGCAAAAGAGAAGTTCAAGGTAAAGGAAGTGATCATCATCAATGATGCAAAACTTGTTTATAAACCATATGAATAGTTTCCCCAAGATCATTTTGGAGAATGACTGCGCAAATGTTGTGAAAATGTGAATGCAGAGAAGACGTCAAATAGAAGCGATTAATGGAGCATGGGCAATGATTGGTCTGACAGCAGGGCTTGTTATCGAAGGTCAAACCGGAAAAGGCATTCTAGCACAGGTGAAAAGTTATAGCATCTTGGCATTTATTTTAACTTTTTTTCCCCCTTCTTTCCTTTAACAAGTTTATATTGGTTTAGAACATTTGTTGATTCCTATATATGCTTAGGAGTATTAGCTTAGAAAATTTAGATAAGTTATCAATTACCAAATTTTATAAGGTTATAAAGTAGTCACCATTTTTCACTTGAGTGAACATGGAGGTGACAGCTTCATCACATGTTGAAGGGTTGGAAAAAAGGAACCGATTTTTAAAGTTATCAACTCTAATTATCAGCAACCTCTCATGTCCTTCAGTGTTGGTCTGGAAAAGATCTTTGATGTGATTAGGTTTAATTCCTCCCGCTGTTGTTTGTTAATATGGTTTTTCTGTAATTATTAGCTTAGCAATTTTCTTTTGGATTGAACCCTTTCTGAAATTGGGTGAGAGTGCTGTTTTTTTTTTGGCTTGTTTTTGTATGCCCTTGTATATTCTTTCATCTTTCTCACTTCTAAAAGCCTGCGTTTCTTATTTAAAGAAAATGTATATAATATAGTCTTATATTTAGTTTTGAACTTTTAGAAATTAAGGGCTTGTTTGGTTATGATTGTGTTTTCTGTTTCTAGTTTTCATTCGGTAAGGCTATTTCCTGTTTCTGGTTTTTGCTACTAGCAATTTTTTTCTTTCCTAATCTAACTGAATCTTAAAGGAGAGCAGCTATATGTTTTTAAAATCTGTGCTTTCAAATAAGTTTCCATGAAAATAGTAAACAAGCTTAGTTTTGAGAGAAGCTATAAAAAATATAGTTTTTGTTTTTAAATTATATGTAAACAAGCTTTGTTTTTATAAACAACGAAAGTATAAATGAAAATTTAACATTACAGTCTATAAATATGAGATGCGATGACCAACATGTGTATAGCTTAGTAGTTCTTGTCAAATATTGTTGTATGTAAACTTACTCGCTTTTTCTTCACATATTTTCCAGTAAAAGTTTCCATAAAAACAGTAAACAATCTTTAGTTTTTATAAACAAAGAAAAACGAAAAATGAAAAATGTAACATGCCAACATGTGTATAGCTCAGTAGTCCAATATTGTTTATACTGTTTATACGCAAACTTCTTAAATGTTTTCTCTTCACTTATTTTCCAGTTGGCCGACTACTTCAGCATCATTATCAACTTCTTCATACGGTAGAGACATCTTCAAGGGGCAAAGGAGAAGTCCTTGAATGAAAAGAGTTATGCTCTTCTCGACTCTTGTAGCAAGTTTTTTTTGCTTGTTTGTTGTAAAAAATATAAAAAAAAAAAAAAAGAAAAAAAGAAAAGAAGAAAAGAAGAAAAAAAAAAAAGAAAAATACTAAGAACCTAAAAATAACTGGTGTTGAAGGTATTTTCTTGGGCTGATTCTTTTCTCTTTTGAGGTTTGATTTGAATTCTTCTCATTTCATATACAAAAATTGTGATTTAATTGTGAAGGCAGTGGGATGAAGCAGCAGATTCAGATGCTCTTGTTTTGGAAGATTCTATTGGCAAATGCCAATGCAATCAAATGTATTACCATCTATCTTTTTATTTATTTATTTATTTATTTATTATTATTATTATAATAATAATTATCATTATTTTTTTAATATCAAGCTTTCATATAGAGGGAGAGAAGAAAAACCATAGTAATAATGCTTGTTTGGATATTTTGTTTTGCTATATTGCTTCACATTATGTCTGGATTAAGTTTGTAGGATCTTGAAAAAGATGAATATGCCTTAATTAATAGGGTCAATTACATTTTTTTTTTCCTTTCTTGGAAACTGAAATAGATTGTAATCAACACAACAGTCCAACAACAATACATCAGATAAGATAAAGAGAAAAAAGTGAGATCTAGAAGAATATGTCAAAACTGCTCGATTATGCTTATTATGGGTTCCTTTGTTTTTCAACTTTGGGAAATTTTAGCTTGTATGGATTATGGTTCAATTTTAGATTTTTTATAAAAAGTGTAAGATTACGCTTTTGTGACCATAATACTTAGGGTTTAGGGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTATCAAGTCATTCTTATACATTTGATATAGTGTAGTGTAGGATTAGGCTGTGCTAAACATCGTGATCTTGTAGCATTCATGCAAGAGAGACGAATTAAGTGGAAAAGCTTCTAGTAGATCAAAATTAAGAGGTTGGAAAATAAAAAATGTAGGAGCTCATGAGAGCAGTATGATCGTGGCAAGAGATCACGTTGAAGATCGCGATCTTGTAGCACTCGTGCAAGAGAGAAACAAAGTATCTACAACGTGA

mRNA sequence

ATGTGGGCACCTGAAATCTATAAATGGATAAGTTTTCATGTAAGAACCCGCTTCACTTTGGAGATGGCTTCCACTGCGCTGATTCTCCCCATCAAAGGACGGAACCTTCCGCCTTCTCAGTACCTGTCTTTCCGCCATACCCATCCTTCTGCTACTTTCTCCAGGTGGGGTTGGAGTAGGGACCAAAATGCTGGCAAATGTACTCACAGAACGAGGGGTCAAGCATTTCAAATCTCTAATGCCTCTCCTGGTAAAGATGGCTTAATCAAGCAGGTGATTATGGTTGACCCTTTGGAAGCCAAACGTATGGCAGCAAAAGAAATGGAAAAGATCAAAGCAAAAGAGAAGTTCAAGAGAAGACGTCAAATAGAAGCGATTAATGGAGCATGGGCAATGATTGGTCTGACAGCAGGGCTTGTTATCGAAGGTCAAACCGGAAAAGGCATTCTAGCACAGCATTCATGCAAGAGAGACGAATTAAGTGGAAAAGCTTCTAGTAGATCAAAATTAAGAGGTTGGAAAATAAAAAATGTAGGAGCTCATGAGAGCAGTATGATCGTGGCAAGAGATCACGTTGAAGATCGCGATCTTGTAGCACTCGTGCAAGAGAGAAACAAAGTATCTACAACGTGA

Coding sequence (CDS)

ATGTGGGCACCTGAAATCTATAAATGGATAAGTTTTCATGTAAGAACCCGCTTCACTTTGGAGATGGCTTCCACTGCGCTGATTCTCCCCATCAAAGGACGGAACCTTCCGCCTTCTCAGTACCTGTCTTTCCGCCATACCCATCCTTCTGCTACTTTCTCCAGGTGGGGTTGGAGTAGGGACCAAAATGCTGGCAAATGTACTCACAGAACGAGGGGTCAAGCATTTCAAATCTCTAATGCCTCTCCTGGTAAAGATGGCTTAATCAAGCAGGTGATTATGGTTGACCCTTTGGAAGCCAAACGTATGGCAGCAAAAGAAATGGAAAAGATCAAAGCAAAAGAGAAGTTCAAGAGAAGACGTCAAATAGAAGCGATTAATGGAGCATGGGCAATGATTGGTCTGACAGCAGGGCTTGTTATCGAAGGTCAAACCGGAAAAGGCATTCTAGCACAGCATTCATGCAAGAGAGACGAATTAAGTGGAAAAGCTTCTAGTAGATCAAAATTAAGAGGTTGGAAAATAAAAAATGTAGGAGCTCATGAGAGCAGTATGATCGTGGCAAGAGATCACGTTGAAGATCGCGATCTTGTAGCACTCGTGCAAGAGAGAAACAAAGTATCTACAACGTGA

Protein sequence

MWAPEIYKWISFHVRTRFTLEMASTALILPIKGRNLPPSQYLSFRHTHPSATFSRWGWSRDQNAGKCTHRTRGQAFQISNASPGKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQHSCKRDELSGKASSRSKLRGWKIKNVGAHESSMIVARDHVEDRDLVALVQERNKVSTT

Homology

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BLAST of HG10006222 vs. NCBI nr
Match: XP_008451793.1 (PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_008451800.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_008451808.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo])

HSP 1 Score: 259.6 bits (662), Expect = 2.3e-65
Identity = 133/154 (86.36%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MWAPEIYKWISFHVRTRFTLEM--ASTALILPIKGRNLPPSQYLSFRHTHPSATFSRWGW 60
           MWA EIYKWIS H R   TLEM  AS +LILPI G NLPPSQYLSFRH+HPSATFSR GW
Sbjct: 1   MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGW 60

Query: 61  SRDQNAGKCTHRTRGQAFQISNASPGKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120
           SRDQ+ G+ THRTRGQAF+ISN SP KDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK
Sbjct: 61  SRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120

Query: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ 153
           RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ
Sbjct: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ 154

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BLAST of HG10006222 vs. NCBI nr
Match: XP_011648927.1 (uncharacterized protein LOC101212671 [Cucumis sativus] >KGN61133.1 hypothetical protein Csa_021338 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 5.3e-62
Identity = 131/154 (85.06%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MWAPEIYKWISFHVRTRFTLEM--ASTALILPIKGRNLPPSQYLSFRHTHPSATFSRWGW 60
           MWA +IYKWIS H   R TL+M  ASTALILPI G NLPPSQYLSFRHT PSATFSR GW
Sbjct: 1   MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW 60

Query: 61  SRDQNAGKCTHRTRGQAFQISNASPGKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120
           SRD  AG+ T RTRGQAF+ISN SPG+DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK
Sbjct: 61  SRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120

Query: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ 153
           RRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ
Sbjct: 121 RRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQ 152

[Close]

BLAST of HG10006222 vs. NCBI nr
Match: XP_038889814.1 (uncharacterized protein LOC120079625 [Benincasa hispida])

HSP 1 Score: 236.5 bits (602), Expect = 2.1e-58
Identity = 120/131 (91.60%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 22  MASTALILPIKGRNLPPSQYLSFRHTHPSATFSRWGWSRDQNAGKCTHRTRGQAFQISNA 81
           MAST+LILPIKG NLPPSQYLSFRHTHPSATFSR GWSRDQ+ G+ THRTRGQAFQISN 
Sbjct: 1   MASTSLILPIKGGNLPPSQYLSFRHTHPSATFSRSGWSRDQDVGRSTHRTRGQAFQISNV 60

Query: 82  SPGKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVI 141
           SPGKD LIKQVIMVDPLEAKR+AAKEMEKIKAKEKFKR+RQIEAINGAWAMIGLTAGLVI
Sbjct: 61  SPGKDDLIKQVIMVDPLEAKRIAAKEMEKIKAKEKFKRKRQIEAINGAWAMIGLTAGLVI 120

Query: 142 EGQTGKGILAQ 153
           EGQTGKGILAQ
Sbjct: 121 EGQTGKGILAQ 131

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BLAST of HG10006222 vs. NCBI nr
Match: XP_016902490.1 (PREDICTED: uncharacterized protein LOC103492970 isoform X2 [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-57
Identity = 124/154 (80.52%), Postives = 129/154 (83.77%), Query Frame = 0


Query: 1   MWAPEIYKWISFHVRTRFTLEM--ASTALILPIKGRNLPPSQYLSFRHTHPSATFSRWGW 60
           MWA EIYKWIS H R   TLEM  AS +LILPI G NLPPSQYLSFRH+HPSATFSR GW
Sbjct: 1   MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGW 60

Query: 61  SRDQNAGKCTHRTRGQAFQISNASPGKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120
           SRDQ+ G+ THRTRGQAF+ISN           VIMVDPLEAKRMAAKEMEKIKAKEKFK
Sbjct: 61  SRDQDVGRSTHRTRGQAFRISN-----------VIMVDPLEAKRMAAKEMEKIKAKEKFK 120

Query: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ 153
           RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ
Sbjct: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ 143

[Close]

BLAST of HG10006222 vs. NCBI nr
Match: KAA0055599.1 (uncharacterized protein E6C27_scaffold222G00820 [Cucumis melo var. makuwa] >TYK01325.1 uncharacterized protein E5676_scaffold29G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 231.1 bits (588), Expect = 8.8e-57
Identity = 117/130 (90.00%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 23  ASTALILPIKGRNLPPSQYLSFRHTHPSATFSRWGWSRDQNAGKCTHRTRGQAFQISNAS 82
           AS +LILPI G NLPPSQYLSFRH+HPSATFSR GWSRDQ+ G+ THRTRGQAF+ISN S
Sbjct: 4   ASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVS 63

Query: 83  PGKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIE 142
           P KDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIE
Sbjct: 64  PAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIE 123

Query: 143 GQTGKGILAQ 153
           GQTGKGILAQ
Sbjct: 124 GQTGKGILAQ 133

[Close]

BLAST of HG10006222 vs. ExPASy TrEMBL
Match: A0A1S3BSE0 (uncharacterized protein LOC103492970 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492970 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65
Identity = 133/154 (86.36%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MWAPEIYKWISFHVRTRFTLEM--ASTALILPIKGRNLPPSQYLSFRHTHPSATFSRWGW 60
           MWA EIYKWIS H R   TLEM  AS +LILPI G NLPPSQYLSFRH+HPSATFSR GW
Sbjct: 1   MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGW 60

Query: 61  SRDQNAGKCTHRTRGQAFQISNASPGKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120
           SRDQ+ G+ THRTRGQAF+ISN SP KDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK
Sbjct: 61  SRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120

Query: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ 153
           RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ
Sbjct: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ 154

[Close]

BLAST of HG10006222 vs. ExPASy TrEMBL
Match: A0A0A0LH95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058660 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.6e-62
Identity = 131/154 (85.06%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MWAPEIYKWISFHVRTRFTLEM--ASTALILPIKGRNLPPSQYLSFRHTHPSATFSRWGW 60
           MWA +IYKWIS H   R TL+M  ASTALILPI G NLPPSQYLSFRHT PSATFSR GW
Sbjct: 1   MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW 60

Query: 61  SRDQNAGKCTHRTRGQAFQISNASPGKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120
           SRD  AG+ T RTRGQAF+ISN SPG+DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK
Sbjct: 61  SRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120

Query: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ 153
           RRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ
Sbjct: 121 RRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQ 152

[Close]

BLAST of HG10006222 vs. ExPASy TrEMBL
Match: A0A1S4E3D1 (uncharacterized protein LOC103492970 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492970 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 8.6e-58
Identity = 124/154 (80.52%), Postives = 129/154 (83.77%), Query Frame = 0


Query: 1   MWAPEIYKWISFHVRTRFTLEM--ASTALILPIKGRNLPPSQYLSFRHTHPSATFSRWGW 60
           MWA EIYKWIS H R   TLEM  AS +LILPI G NLPPSQYLSFRH+HPSATFSR GW
Sbjct: 1   MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGW 60

Query: 61  SRDQNAGKCTHRTRGQAFQISNASPGKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120
           SRDQ+ G+ THRTRGQAF+ISN           VIMVDPLEAKRMAAKEMEKIKAKEKFK
Sbjct: 61  SRDQDVGRSTHRTRGQAFRISN-----------VIMVDPLEAKRMAAKEMEKIKAKEKFK 120

Query: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ 153
           RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ
Sbjct: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ 143

[Close]

BLAST of HG10006222 vs. ExPASy TrEMBL
Match: A0A5A7UQ54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00030 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.3e-57
Identity = 117/130 (90.00%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 23  ASTALILPIKGRNLPPSQYLSFRHTHPSATFSRWGWSRDQNAGKCTHRTRGQAFQISNAS 82
           AS +LILPI G NLPPSQYLSFRH+HPSATFSR GWSRDQ+ G+ THRTRGQAF+ISN S
Sbjct: 4   ASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRISNVS 63

Query: 83  PGKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIE 142
           P KDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIE
Sbjct: 64  PAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIE 123

Query: 143 GQTGKGILAQ 153
           GQTGKGILAQ
Sbjct: 124 GQTGKGILAQ 133

[Close]

BLAST of HG10006222 vs. ExPASy TrEMBL
Match: A0A6J1I0N1 (uncharacterized protein LOC111468645 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468645 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 7.0e-52
Identity = 111/134 (82.84%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 22  MASTALILPIKGRNLPPSQYLSFRHTHPSATFSRWGWSRDQNAGKCTHRTRGQAFQI--- 81
           MASTALILPI G N   SQ LSFRHTH SATFSRWGWSRD++ G  THRTRGQAF+I   
Sbjct: 1   MASTALILPIHGGNRTSSQCLSFRHTHSSATFSRWGWSRDRDVGNSTHRTRGQAFRILAN 60

Query: 82  SNASPGKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAG 141
            N SPGKD LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAG
Sbjct: 61  PNVSPGKDDLIKKVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAG 120

Query: 142 LVIEGQTGKGILAQ 153
           L++EGQTGKGILAQ
Sbjct: 121 LIVEGQTGKGILAQ 134

[Close]

BLAST of HG10006222 vs. TAIR 10
Match: AT4G28025.2 (unknown protein. )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 65/123 (52.85%), Postives = 83/123 (67.48%), Query Frame = 0


Query: 37  PPSQYLSFRHTHPSATFSRWGWSRDQNAGKCTHRTR-GQAFQISNAS------PGKDGLI 96
           PP  +L       S++  R G  R Q+A    +R R G    ++N +      PGK  + 
Sbjct: 10  PPIFFLPGADAQFSSSNGRKGLRRHQDAKLVGNRARVGVVRVLANPNVSPPPPPGKAKVK 69

Query: 97  KQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGI 153
           K+VIMVDPLEAKR+A+K+ME+IK +EK +RRR+IEAINGAWA+IGL  GLVIE QTGKGI
Sbjct: 70  KEVIMVDPLEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGI 129

[Close]

BLAST of HG10006222 vs. TAIR 10
Match: AT4G28025.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 63/115 (54.78%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 45  RHTHPSATFSRWGWSRDQNAGKCTHRTR-GQAFQISNAS------PGKDGLIKQVIMVDP 104
           R   PS++  + G  R Q+A    +R R G    ++N +      PGK  + K+VIMVDP
Sbjct: 28  RFAIPSSSLVK-GLRRHQDAKLVGNRARVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDP 87

Query: 105 LEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQ 153
           LEAKR+A+K+ME+IK +EK +RRR+IEAINGAWA+IGL  GLVIE QTGKGILAQ
Sbjct: 88  LEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGILAQ 141

The following BLAST results are available for this feature:

BLAST of HG10006222 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451793.1	2.3e-65	86.36	PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_011648927.1	5.3e-62	85.06	uncharacterized protein LOC101212671 [Cucumis sativus] >KGN61133.1 hypothetical ...	[more]
XP_038889814.1	2.1e-58	91.60	uncharacterized protein LOC120079625 [Benincasa hispida]	[more]
XP_016902490.1	1.8e-57	80.52	PREDICTED: uncharacterized protein LOC103492970 isoform X2 [Cucumis melo]	[more]
KAA0055599.1	8.8e-57	90.00	uncharacterized protein E6C27_scaffold222G00820 [Cucumis melo var. makuwa] >TYK0...	[more]

BLAST of HG10006222 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10006222 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BSE0	1.1e-65	86.36	uncharacterized protein LOC103492970 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LH95	2.6e-62	85.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058660 PE=4 SV=1	[more]
A0A1S4E3D1	8.6e-58	80.52	uncharacterized protein LOC103492970 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UQ54	4.3e-57	90.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1I0N1	7.0e-52	82.84	uncharacterized protein LOC111468645 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of HG10006222 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28025.2	1.2e-22	52.85	unknown protein.	[more]
AT4G28025.1	1.3e-21	54.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37752	OS02G0610700 PROTEIN	coord: 31..152
None	No IPR available	PANTHER	PTHR37752:SF1	OS02G0610700 PROTEIN	coord: 31..152
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 112..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006222.1	HG10006222.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0046872	metal ion binding