HG10006201 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006201
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	transcription factor bHLH146-like
Location	Chr07: 15671292 .. 15671915 (+)
RNA-Seq Expression	HG10006201
Synteny	HG10006201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCAAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTCAAAATTTCTCATCATCATCAACAACAACAAGAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGAGAATTTGCATGGGGAATTGTTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTAGCAATGGCAATGGCAATGAAAATGATTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAAATTTTGGAAAGGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGATGGAACATGGGTTGAAGAAGCTGAGGAAAATCATACCAGGTGGTGATGATTTTAATATTGGAGATTTGGAAGAAGATGATCATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

mRNA sequence

ATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCAAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTCAAAATTTCTCATCATCATCAACAACAACAAGAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGAGAATTTGCATGGGGAATTGTTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTAGCAATGGCAATGGCAATGAAAATGATTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAAATTTTGGAAAGGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGATGGAACATGGGTTGAAGAAGCTGAGGAAAATCATACCAGGTGGTGATGATTTTAATATTGGAGATTTGGAAGAAGATGATCATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

Coding sequence (CDS)

ATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCAAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTCAAAATTTCTCATCATCATCAACAACAACAAGAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGAGAATTTGCATGGGGAATTGTTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTAGCAATGGCAATGGCAATGAAAATGATTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAAATTTTGGAAAGGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGATGGAACATGGGTTGAAGAAGCTGAGGAAAATCATACCAGGTGGTGATGATTTTAATATTGGAGATTTGGAAGAAGATGATCATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

Protein sequence

MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIVLKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF

Homology

[Close]

BLAST of HG10006201 vs. NCBI nr
Match: XP_038877916.1 (transcription factor bHLH146-like [Benincasa hispida])

HSP 1 Score: 256.1 bits (653), Expect = 2.5e-64
Identity = 155/212 (73.11%), Postives = 161/212 (75.94%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISH----HHQQQQENFQKLV 60
           MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVK+LMTSLVKISH    HHQQQ++NFQK V
Sbjct: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKHLMTSLVKISHHHHQHHQQQEQNFQKFV 60

Query: 61  KFEVDMAMALSAR-EFAWGIVLKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQ 120
           KFEVDMAMA SA  +FAWGI LKKKLLQR+     GNENDFDFSLQTVKFSQEN GK   
Sbjct: 61  KFEVDMAMAQSASDQFAWGIALKKKLLQRDQV---GNENDFDFSLQTVKFSQENLGK--- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEE 180
                                   EEEEE EEEKKMEHGL KLRKIIPGG DFNI     
Sbjct: 121 ------------------------EEEEEAEEEKKMEHGLMKLRKIIPGGADFNI----- 177

Query: 181 DDHDLLKQTESYVKCLELQVNVLRGLVETNTF 208
           +D DLLKQTESYVKCLELQVNVLRGLVETNTF
Sbjct: 181 EDDDLLKQTESYVKCLELQVNVLRGLVETNTF 177

[Close]

BLAST of HG10006201 vs. NCBI nr
Match: XP_016901419.1 (PREDICTED: uncharacterized protein At4g30180 [Cucumis melo])

HSP 1 Score: 230.7 bits (587), Expect = 1.1e-56
Identity = 151/213 (70.89%), Postives = 169/213 (79.34%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEV 60
           M R+IVRKG RRVFS+EPNKVAYTMFARNYVK+LMTSLVKIS  HQQQQ+NFQKLV+FEV
Sbjct: 1   MVRKIVRKG-RRVFSIEPNKVAYTMFARNYVKHLMTSLVKIS--HQQQQQNFQKLVRFEV 60

Query: 61  DMAMALSAREFAWGIVLKKKLLQREVSN---GNGNENDFDFSLQTV-KFSQENFGKEEQE 120
           DMAMA SA EF+WGI LKKKLLQR+      GNG+EN FDFSLQT+ K S +N G EE++
Sbjct: 61  DMAMAQSASEFSWGIALKKKLLQRDDQQEVLGNGSENGFDFSLQTMKKISHKNLGNEEED 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIG--DLE 180
             E+EEEEEEEEEEE                   ME+GL KLRKIIPGGDDF+IG  +L+
Sbjct: 121 HHEDEEEEEEEEEEE-------------------MENGLMKLRKIIPGGDDFSIGGNNLD 180

Query: 181 EDDHDLLKQTESYVKCLELQVNVLRGLVETNTF 208
           E+D DLLKQTESYVKCLELQVNVLRGLVETNTF
Sbjct: 181 EED-DLLKQTESYVKCLELQVNVLRGLVETNTF 190

[Close]

BLAST of HG10006201 vs. NCBI nr
Match: XP_011648935.1 (transcription factor bHLH146 [Cucumis sativus] >KGN61154.1 hypothetical protein Csa_021305 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 1.3e-55
Identity = 144/209 (68.90%), Postives = 162/209 (77.51%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEV 60
           M R++VRKG RRVFS+EP+KVAYTMF RNYVK+LMTSLVKIS  HQQQQ+NF+KLVKFEV
Sbjct: 1   MVRKMVRKG-RRVFSIEPSKVAYTMFERNYVKHLMTSLVKIS--HQQQQQNFRKLVKFEV 60

Query: 61  DMAMALSAREFAWGIVLKKKLLQREVS-NGNGNENDFDFSLQTV-KFSQENFGKEEQEEE 120
           DMAMA SA EF+WGI LKKKLLQR+    GNGNEN FDFS+QTV K SQEN G EE++  
Sbjct: 61  DMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSVQTVKKTSQENLGNEEEDHH 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDH 180
            EEEEEEEEE                      ME+GL KLRKIIPGGD+F+IG   +++ 
Sbjct: 121 HEEEEEEEEE----------------------MENGLMKLRKIIPGGDNFSIGGNLDEED 180

Query: 181 DLLKQTESYVKCLELQVNVLRGLVETNTF 208
           DLLKQTESYVKCLELQVNVLRGLVETNTF
Sbjct: 181 DLLKQTESYVKCLELQVNVLRGLVETNTF 184

[Close]

BLAST of HG10006201 vs. NCBI nr
Match: XP_023538247.1 (transcription factor bHLH146-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.1 bits (536), Expect = 9.3e-51
Identity = 136/207 (65.70%), Postives = 149/207 (71.98%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFE 60
           MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHHHQQ QE NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFE 60

Query: 61  VDMAMALSAREFAWGIVLKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEE 120
           VDMAMA SA EF+WG  LKKKLLQRE  NG+   N F FSLQTVKFSQEN          
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDGNGS---NGFGFSLQTVKFSQENL--------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHD 180
                            E E EE EE +E K+E+GL KLRKI+PGG +   G+LEED  D
Sbjct: 121 -----------------EREHEEHEERKEPKIENGLMKLRKIVPGGSN---GELEED--D 172

Query: 181 LLKQTESYVKCLELQVNVLRGLVETNT 207
           L KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 181 LFKQTESYIKCLELQVNVLRCLVDTNT 172

[Close]

BLAST of HG10006201 vs. NCBI nr
Match: XP_022938205.1 (transcription factor bHLH146-like [Cucurbita moschata])

HSP 1 Score: 208.0 bits (528), Expect = 7.9e-50
Identity = 136/207 (65.70%), Postives = 151/207 (72.95%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFE 60
           MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHHHQQ QE NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFE 60

Query: 61  VDMAMALSAREFAWGIVLKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEE 120
           VDMAMA SA EF+WG  LKKKLLQRE  NG+   N F  SLQ VKFS+EN          
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDGNGS---NGFGLSLQRVKFSRENL--------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHD 180
                         E E+EE EE EE EE+K+E+GL KLRKI+PGG +   G+LEED  D
Sbjct: 121 --------------EREDEEHEEREEHEERKIENGLMKLRKIVPGGSN---GELEED--D 175

Query: 181 LLKQTESYVKCLELQVNVLRGLVETNT 207
           L KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 181 LFKQTESYIKCLELQVNVLRCLVDTNT 175

[Close]

BLAST of HG10006201 vs. ExPASy Swiss-Prot
Match: Q9SUM5 (Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-07
Identity = 66/206 (32.04%), Postives = 104/206 (50.49%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEV 60
           M RQI+ +  +RVFSLEPNK    +F R Y  +L+ +L K++      + + ++ VK EV
Sbjct: 1   MERQIINR-KKRVFSLEPNKNPSAVFTRKYTSHLVPALKKLN----MNKNSSKQTVKHEV 60

Query: 61  DMAMALSAREFAWGIVLKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEE 120
           DMA+ALSA+EFAW     + LLQ+  S+ N           T   S  + G    E  ++
Sbjct: 61  DMALALSAQEFAW----SRFLLQKLSSSSN----------PTTTTSSSSDGIRILERPDK 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDL 180
           E   EE   EE                       L++L+K++PGG++ N+        ++
Sbjct: 121 EGGNEEGGIEER----------------------LRELKKLLPGGEEMNV-------EEM 158

Query: 181 LKQTESYVKCLELQVNVLRGLVETNT 207
           L +  +Y+KCLELQ   L+ +V+ +T
Sbjct: 181 LSEIGNYIKCLELQTIALKSIVQDST 158

[Close]

BLAST of HG10006201 vs. ExPASy TrEMBL
Match: A0A1S4DZN3 (uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 5.5e-57
Identity = 151/213 (70.89%), Postives = 169/213 (79.34%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEV 60
           M R+IVRKG RRVFS+EPNKVAYTMFARNYVK+LMTSLVKIS  HQQQQ+NFQKLV+FEV
Sbjct: 1   MVRKIVRKG-RRVFSIEPNKVAYTMFARNYVKHLMTSLVKIS--HQQQQQNFQKLVRFEV 60

Query: 61  DMAMALSAREFAWGIVLKKKLLQREVSN---GNGNENDFDFSLQTV-KFSQENFGKEEQE 120
           DMAMA SA EF+WGI LKKKLLQR+      GNG+EN FDFSLQT+ K S +N G EE++
Sbjct: 61  DMAMAQSASEFSWGIALKKKLLQRDDQQEVLGNGSENGFDFSLQTMKKISHKNLGNEEED 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIG--DLE 180
             E+EEEEEEEEEEE                   ME+GL KLRKIIPGGDDF+IG  +L+
Sbjct: 121 HHEDEEEEEEEEEEE-------------------MENGLMKLRKIIPGGDDFSIGGNNLD 180

Query: 181 EDDHDLLKQTESYVKCLELQVNVLRGLVETNTF 208
           E+D DLLKQTESYVKCLELQVNVLRGLVETNTF
Sbjct: 181 EED-DLLKQTESYVKCLELQVNVLRGLVETNTF 190

[Close]

BLAST of HG10006201 vs. ExPASy TrEMBL
Match: A0A0A0LJA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 6.1e-56
Identity = 144/209 (68.90%), Postives = 162/209 (77.51%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEV 60
           M R++VRKG RRVFS+EP+KVAYTMF RNYVK+LMTSLVKIS  HQQQQ+NF+KLVKFEV
Sbjct: 1   MVRKMVRKG-RRVFSIEPSKVAYTMFERNYVKHLMTSLVKIS--HQQQQQNFRKLVKFEV 60

Query: 61  DMAMALSAREFAWGIVLKKKLLQREVS-NGNGNENDFDFSLQTV-KFSQENFGKEEQEEE 120
           DMAMA SA EF+WGI LKKKLLQR+    GNGNEN FDFS+QTV K SQEN G EE++  
Sbjct: 61  DMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSVQTVKKTSQENLGNEEEDHH 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDH 180
            EEEEEEEEE                      ME+GL KLRKIIPGGD+F+IG   +++ 
Sbjct: 121 HEEEEEEEEE----------------------MENGLMKLRKIIPGGDNFSIGGNLDEED 180

Query: 181 DLLKQTESYVKCLELQVNVLRGLVETNTF 208
           DLLKQTESYVKCLELQVNVLRGLVETNTF
Sbjct: 181 DLLKQTESYVKCLELQVNVLRGLVETNTF 184

[Close]

BLAST of HG10006201 vs. ExPASy TrEMBL
Match: A0A6J1FJ33 (transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.8e-50
Identity = 136/207 (65.70%), Postives = 151/207 (72.95%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFE 60
           MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHHHQQ QE NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFE 60

Query: 61  VDMAMALSAREFAWGIVLKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEE 120
           VDMAMA SA EF+WG  LKKKLLQRE  NG+   N F  SLQ VKFS+EN          
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDGNGS---NGFGLSLQRVKFSRENL--------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHD 180
                         E E+EE EE EE EE+K+E+GL KLRKI+PGG +   G+LEED  D
Sbjct: 121 --------------EREDEEHEEREEHEERKIENGLMKLRKIVPGGSN---GELEED--D 175

Query: 181 LLKQTESYVKCLELQVNVLRGLVETNT 207
           L KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 181 LFKQTESYIKCLELQVNVLRCLVDTNT 175

[Close]

BLAST of HG10006201 vs. ExPASy TrEMBL
Match: A0A6J1I0E6 (transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.7e-48
Identity = 137/207 (66.18%), Postives = 154/207 (74.40%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQ-QQENFQKLVKFE 60
           MGRQI+RK  +RV SLEP+K+AYTMFARNYVKYLMTSL KISHHHQQ QQ+NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPDKLAYTMFARNYVKYLMTSLPKISHHHQQHQQQNFQKLVKFE 60

Query: 61  VDMAMALSAREFAWGIVLKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEE 120
           VDMAMA SA EF+WG  LKKKLLQRE  NG+   N F FSL  VKFS+EN          
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDDNGS---NGFGFSL-PVKFSRENL--------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHD 180
                      E E+EE EE EE EE EE+K+E+GL KLRKI+PGG +   G+LEED  D
Sbjct: 121 -----------EREDEEHEEHEEHEEREERKIENGLMKLRKIVPGGSN---GELEED--D 177

Query: 181 LLKQTESYVKCLELQVNVLRGLVETNT 207
           L KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 181 LFKQTESYIKCLELQVNVLRCLVDTNT 177

[Close]

BLAST of HG10006201 vs. ExPASy TrEMBL
Match: A0A6J1DIU0 (transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 8.8e-47
Identity = 130/209 (62.20%), Postives = 148/209 (70.81%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEV 60
           MGRQIVRK  RRVFSLEPNK+ Y MFARNY K LM SL KIS +HQ    N QK+VKFEV
Sbjct: 1   MGRQIVRK-RRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQ----NLQKVVKFEV 60

Query: 61  DMAMALSAREFAWGIVLKKKLLQREVSNGNGN-ENDFDFSLQTVKFSQENFGKEEQEEEE 120
           DMAMALSA EFAWG  LK+KLLQ++  NGNGN  N FDFSLQT+KFS+            
Sbjct: 61  DMAMALSASEFAWGHALKQKLLQKQ-ENGNGNGRNSFDFSLQTLKFSR------------ 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFN--IGDLEEDD 180
                              E+EEEEEE++KKME+GL KLRKI+PGG++ N   GDL E+D
Sbjct: 121 -------------------EKEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEED 171

Query: 181 HDLLKQTESYVKCLELQVNVLRGLVETNT 207
            DLLKQTESY+KCLELQVNVLR LV+TNT
Sbjct: 181 -DLLKQTESYIKCLELQVNVLRCLVDTNT 171

[Close]

BLAST of HG10006201 vs. TAIR 10
Match: AT2G18969.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT4G30180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 5.0e-10
Identity = 74/209 (35.41%), Postives = 114/209 (54.55%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQENFQKL---VK 60
           M RQI+ K  +RVFSL+PNK    +FAR YV +L+ +L KI+ +    + N Q L   VK
Sbjct: 1   MERQIINK-RKRVFSLQPNKNPKAVFARRYVSHLVPALKKINMNKSSSKTNKQSLEQTVK 60

Query: 61  FEVDMAMALSAREFAWGIVLKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEE 120
            EVDMA ALSA+EFAW   L++KLL           + +D  + T               
Sbjct: 61  HEVDMAFALSAQEFAWSRFLQQKLL----------SSPYDDPIST--------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDD 180
                  E  E   + +  E+ ++ +EEEE  +++  LK+L+K++PGG++ N+       
Sbjct: 121 --SSSPSEILERSSKRQGGEKHQDSDEEEEGGEIKKRLKELQKLLPGGEEMNM------- 174

Query: 181 HDLLKQTESYVKCLELQVNVLRGLVETNT 207
            ++L +  SY+ CLELQ+ VL+ +V+ NT
Sbjct: 181 EEILSEIGSYIVCLELQMIVLKSIVQDNT 174

[Close]

BLAST of HG10006201 vs. TAIR 10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators )

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-08
Identity = 66/206 (32.04%), Postives = 104/206 (50.49%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEV 60
           M RQI+ +  +RVFSLEPNK    +F R Y  +L+ +L K++      + + ++ VK EV
Sbjct: 1   MERQIINR-KKRVFSLEPNKNPSAVFTRKYTSHLVPALKKLN----MNKNSSKQTVKHEV 60

Query: 61  DMAMALSAREFAWGIVLKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEE 120
           DMA+ALSA+EFAW     + LLQ+  S+ N           T   S  + G    E  ++
Sbjct: 61  DMALALSAQEFAW----SRFLLQKLSSSSN----------PTTTTSSSSDGIRILERPDK 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDL 180
           E   EE   EE                       L++L+K++PGG++ N+        ++
Sbjct: 121 EGGNEEGGIEER----------------------LRELKKLLPGGEEMNV-------EEM 158

Query: 181 LKQTESYVKCLELQVNVLRGLVETNT 207
           L +  +Y+KCLELQ   L+ +V+ +T
Sbjct: 181 LSEIGNYIKCLELQTIALKSIVQDST 158

The following BLAST results are available for this feature:

BLAST of HG10006201 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877916.1	2.5e-64	73.11	transcription factor bHLH146-like [Benincasa hispida]	[more]
XP_016901419.1	1.1e-56	70.89	PREDICTED: uncharacterized protein At4g30180 [Cucumis melo]	[more]
XP_011648935.1	1.3e-55	68.90	transcription factor bHLH146 [Cucumis sativus] >KGN61154.1 hypothetical protein ...	[more]
XP_023538247.1	9.3e-51	65.70	transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938205.1	7.9e-50	65.70	transcription factor bHLH146-like [Cucurbita moschata]	[more]

BLAST of HG10006201 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUM5	2.9e-07	32.04	Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=...	[more]

BLAST of HG10006201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZN3	5.5e-57	70.89	uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 S...	[more]
A0A0A0LJA7	6.1e-56	68.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1	[more]
A0A6J1FJ33	3.8e-50	65.70	transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 ...	[more]
A0A6J1I0E6	2.7e-48	66.18	transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE...	[more]
A0A6J1DIU0	8.8e-47	62.20	transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4...	[more]

BLAST of HG10006201 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18969.1	5.0e-10	35.41	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT4G30180.1	2.1e-08	32.04	sequence-specific DNA binding transcription factors;transcription regulators	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..157
None	No IPR available	GENE3D	3.30.70.2850		coord: 7..192 e-value: 3.8E-5 score: 25.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..154
None	No IPR available	PANTHER	PTHR33124:SF42	TRANSCRIPTION FACTOR BHLH146	coord: 10..206
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 10..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006201.1	HG10006201.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated