Homology
BLAST of HG10006146 vs. NCBI nr
Match:
XP_038891045.1 (pentatricopeptide repeat-containing protein At3g42630 [Benincasa hispida] >XP_038891046.1 pentatricopeptide repeat-containing protein At3g42630 [Benincasa hispida])
HSP 1 Score: 681.0 bits (1756), Expect = 5.4e-192
Identity = 335/354 (94.63%), Postives = 346/354 (97.74%), Query Frame = 0
Query: 1 MPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 60
+PVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDG LPLQAQ +WEEMLNSSFEPSVQVIS
Sbjct: 72 IPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGDLPLQAQVLWEEMLNSSFEPSVQVIS 131
Query: 61 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 120
K FNAYGKMGHFDDIT+VL QVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMV S
Sbjct: 132 KFFNAYGKMGHFDDITKVLDQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVSS 191
Query: 121 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
GFPVNS+TGNSFI+YYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIR+RKFYRL
Sbjct: 192 GFPVNSATGNSFIIYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRQRKFYRL 251
Query: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA
Sbjct: 252 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 311
Query: 241 FSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPIS 300
FSRMDLLWDLHLSLEHM HMKI+PD+VTYGCVVDAY+DRRLGRNL+FVLSKMNPNQPP+
Sbjct: 312 FSRMDLLWDLHLSLEHMTHMKIKPDVVTYGCVVDAYVDRRLGRNLEFVLSKMNPNQPPVL 371
Query: 301 LTDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
LTDPFVFEALGKGDFHMSSEAFMQ QRQKKWTYRELISLYLKKQHRRDQVFWNY
Sbjct: 372 LTDPFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKKQHRRDQVFWNY 425
BLAST of HG10006146 vs. NCBI nr
Match:
XP_011648974.1 (pentatricopeptide repeat-containing protein At3g42630 [Cucumis sativus])
HSP 1 Score: 664.8 bits (1714), Expect = 4.0e-187
Identity = 326/354 (92.09%), Postives = 343/354 (96.89%), Query Frame = 0
Query: 1 MPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 60
MP+LAKEIFLELKSEGFPLNNSTLST+MVHYID G PLQAQA+WEEMLNS FEPSVQVIS
Sbjct: 70 MPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVIS 129
Query: 61 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 120
KLFNAYGKMGHFD IT+VL QVKLRYSHLLPEAYSLAISCFGK+KQLELMESTLREMV S
Sbjct: 130 KLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSS 189
Query: 121 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
GF VNS+TGNSFI+YYSMFGSL+EMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL
Sbjct: 190 GFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 249
Query: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMV+AGFNPDLTTFNIRALA
Sbjct: 250 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALA 309
Query: 241 FSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPIS 300
FSRMDLLWDLHLSLEHMKHM IEPDLVTYGCVVDAY+DRRLGRNL+F+LSKMNP+QPP+S
Sbjct: 310 FSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQPPVS 369
Query: 301 LTDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
LTD FVFEALGKGDFHMSSEAFMQ ++QKKWTYRELISLYLKK HRR+QVFWNY
Sbjct: 370 LTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 423
BLAST of HG10006146 vs. NCBI nr
Match:
XP_008450656.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like [Cucumis melo] >XP_008450664.1 PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like [Cucumis melo] >XP_008450673.1 PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like [Cucumis melo])
HSP 1 Score: 664.8 bits (1714), Expect = 4.0e-187
Identity = 328/354 (92.66%), Postives = 342/354 (96.61%), Query Frame = 0
Query: 1 MPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 60
MP LAKEIFLELKSEGFPLNNSTLST+MVHYID G PLQAQA+WEEMLNS FEPSVQVIS
Sbjct: 72 MPTLAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVIS 131
Query: 61 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 120
KLFNAYGKMGHFD IT+VL QVKLRYSHLLPEAYSLAISCFGK+KQLELMESTLREMV S
Sbjct: 132 KLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSS 191
Query: 121 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
GF VNS+TGNSFI+YYSMFGSL+EMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL
Sbjct: 192 GFTVNSATGNSFIIYYSMFGSLLEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 251
Query: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA
Sbjct: 252 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 311
Query: 241 FSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPIS 300
FSRMDLLWDLHLSLEHMKHM IEPDLVTYGCVVDAY+DRRLGRNL+F+LSKMNP QPP+S
Sbjct: 312 FSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPVQPPVS 371
Query: 301 LTDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
LTD FVFEALGKGDFHMSSEAFMQ ++QKKWTYRELISLYLKKQHRR+QVFWNY
Sbjct: 372 LTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKQHRRNQVFWNY 425
BLAST of HG10006146 vs. NCBI nr
Match:
KAA0047593.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08252.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 664.8 bits (1714), Expect = 4.0e-187
Identity = 328/354 (92.66%), Postives = 342/354 (96.61%), Query Frame = 0
Query: 1 MPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 60
MP LAKEIFLELKSEGFPLNNSTLST+MVHYID G PLQAQA+WEEMLNS FEPSVQVIS
Sbjct: 1 MPTLAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVIS 60
Query: 61 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 120
KLFNAYGKMGHFD IT+VL QVKLRYSHLLPEAYSLAISCFGK+KQLELMESTLREMV S
Sbjct: 61 KLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSS 120
Query: 121 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
GF VNS+TGNSFI+YYSMFGSL+EMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL
Sbjct: 121 GFTVNSATGNSFIIYYSMFGSLLEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
Query: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA
Sbjct: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
Query: 241 FSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPIS 300
FSRMDLLWDLHLSLEHMKHM IEPDLVTYGCVVDAY+DRRLGRNL+F+LSKMNP QPP+S
Sbjct: 241 FSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPVQPPVS 300
Query: 301 LTDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
LTD FVFEALGKGDFHMSSEAFMQ ++QKKWTYRELISLYLKKQHRR+QVFWNY
Sbjct: 301 LTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKQHRRNQVFWNY 354
BLAST of HG10006146 vs. NCBI nr
Match:
KAE8651691.1 (hypothetical protein Csa_006211 [Cucumis sativus])
HSP 1 Score: 664.8 bits (1714), Expect = 4.0e-187
Identity = 326/354 (92.09%), Postives = 343/354 (96.89%), Query Frame = 0
Query: 1 MPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 60
MP+LAKEIFLELKSEGFPLNNSTLST+MVHYID G PLQAQA+WEEMLNS FEPSVQVIS
Sbjct: 1 MPILAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVIS 60
Query: 61 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 120
KLFNAYGKMGHFD IT+VL QVKLRYSHLLPEAYSLAISCFGK+KQLELMESTLREMV S
Sbjct: 61 KLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSS 120
Query: 121 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
GF VNS+TGNSFI+YYSMFGSL+EMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL
Sbjct: 121 GFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
Query: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMV+AGFNPDLTTFNIRALA
Sbjct: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALA 240
Query: 241 FSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPIS 300
FSRMDLLWDLHLSLEHMKHM IEPDLVTYGCVVDAY+DRRLGRNL+F+LSKMNP+QPP+S
Sbjct: 241 FSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQPPVS 300
Query: 301 LTDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
LTD FVFEALGKGDFHMSSEAFMQ ++QKKWTYRELISLYLKK HRR+QVFWNY
Sbjct: 301 LTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 354
BLAST of HG10006146 vs. ExPASy Swiss-Prot
Match:
Q9M2A1 (Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX=3702 GN=At3g42630 PE=2 SV=2)
HSP 1 Score: 428.7 bits (1101), Expect = 6.4e-119
Identity = 207/354 (58.47%), Postives = 268/354 (75.71%), Query Frame = 0
Query: 1 MPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 60
+P +A EIFL+ KS N TL LM+ + + G L+A+ IW+E++NS F P V V+S
Sbjct: 62 LPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEIINSCFVPDVFVVS 121
Query: 61 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 120
KL +AY + G FD++ ++ V R+S LLP SLAISCFGKN QLELME + EM
Sbjct: 122 KLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQLELMEGVIEEMDSK 181
Query: 121 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
G + + T N + YYS FGSL +ME AYGR+K+ +IE++ I A+ AY+++RKFYRL
Sbjct: 182 GVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRAVVLAYLKQRKFYRL 241
Query: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
EFL DVGLGR+N+GN+LWN +LLSYAA+FKMKSLQREF+ M++AGF+PDLTTFNIRALA
Sbjct: 242 REFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAGFSPDLTTFNIRALA 301
Query: 241 FSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPIS 300
FSRM L WDLHL+LEHM+ + I PDLVT+GCVVDAY+D+RL RNL+FV ++MN + P+
Sbjct: 302 FSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLEFVYNRMNLDDSPLV 361
Query: 301 LTDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
LTDP FE LGKGDFH+SSEA ++ +K WTYR+LI +YLKK+ RRDQ+FWNY
Sbjct: 362 LTDPLAFEVLGKGDFHLSSEAVLEFSPRKNWTYRKLIGVYLKKKLRRDQIFWNY 415
BLAST of HG10006146 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 1.6e-13
Identity = 78/353 (22.10%), Postives = 144/353 (40.79%), Query Frame = 0
Query: 5 AKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVISKLFN 64
A E+ ++ +G + T +TL+ + G A +I+EEM N+ +P++ +
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 65 AYGKMGHFDDITEVLAQVKLRYSHLLPE--AYSLAISCFGKNKQLELMESTLREMVCSGF 124
YG G F ++ ++ ++ + L P+ ++ ++ FG+N + +EM +GF
Sbjct: 428 MYGNRGKFTEMMKIFDEINV--CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 487
Query: 125 PVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGE 184
T N+ I YS GS + T Y R+ + + + A R + + +
Sbjct: 488 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 547
Query: 185 FLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAG-FNPDLTTFNIRALAF 244
L ++ GR L + LL +Y AN K L + V +G P L
Sbjct: 548 VLAEMEDGRCKPNELTYCSLLHAY-ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 607
Query: 245 SRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPN--QPPI 304
S+ DLL + + +K PD+ T +V Y R++ + VL M P +
Sbjct: 608 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 667
Query: 305 SLTDPFVFEALGKGDFHMSSEAFMQLQ----RQKKWTYRELISLYLKKQHRRD 349
+ + ++ DF S E ++ + +Y +I Y + RD
Sbjct: 668 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRD 717
BLAST of HG10006146 vs. ExPASy Swiss-Prot
Match:
O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 1.4e-12
Identity = 64/312 (20.51%), Postives = 134/312 (42.95%), Query Frame = 0
Query: 7 EIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVISKLFNAY 66
++ ++KS G N +T +T++ + G+ ++ EM + FEP + L +AY
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 67 GKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCSGFPVNS 126
G+ G D +++ ++ + Y+ ++ + E+ + +M GF
Sbjct: 502 GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTE 561
Query: 127 STGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRD 186
++ + + Y+ G+ + +E R+K + + + A + R L R
Sbjct: 562 TSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR---ALAGSERA 621
Query: 187 VGLGRKN---VGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALAFSR 246
L +K+ +++N +L + N + + E G +PDL T+N + R
Sbjct: 622 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 681
Query: 247 MDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPN--QPPISL 306
W L+ ++ +++PDLV+Y V+ + R L + +LS+M +P I
Sbjct: 682 RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFT 741
Query: 307 TDPFV--FEALG 312
+ FV + A+G
Sbjct: 742 YNTFVSGYTAMG 750
BLAST of HG10006146 vs. ExPASy Swiss-Prot
Match:
Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 3.0e-12
Identity = 75/315 (23.81%), Postives = 139/315 (44.13%), Query Frame = 0
Query: 37 PLQAQAIWEEMLNSSFEPSVQVISKLFNAYGKMGHFDDITEVLAQVKLRYSHLLPE--AY 96
P QA ++E ML+ +P++ V + L + YGK D L +K S P+ +
Sbjct: 110 PDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMK-SVSDCKPDVFTF 169
Query: 97 SLAISCFGKNKQLELMESTLREMVCSGFPVNSSTGNSFIVYYSMFGSLIEMETAYG-RLK 156
++ ISC K + +L++S + EM G ++ T N+ I Y G EME+ ++
Sbjct: 170 TVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIE 229
Query: 157 RSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMK 216
L + + ++ +Y R ++ + L +N+L+LS+ K
Sbjct: 230 DGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYK 289
Query: 217 SLQREFLQMVEAGFNPDLTTFNIRALAFSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVV 276
+ M + F+ T+NI F + + + MK+ ++P+ +TY +V
Sbjct: 290 KMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLV 349
Query: 277 DAYLDRRLGRNLDFVLSKMNPNQPPISLTDPF---VFEALGK-GDFHMSSEAFMQLQRQK 336
+AY L +D VL ++ + + L PF + A G+ GD E ++Q++ +K
Sbjct: 350 NAYSKAGLVVKIDSVLRQIVNSD--VVLDTPFFNCIINAYGQAGDLATMKELYIQMEERK 409
Query: 337 ----KWTYRELISLY 341
K T+ +I Y
Sbjct: 410 CKPDKITFATMIKTY 421
BLAST of HG10006146 vs. ExPASy Swiss-Prot
Match:
Q5G1S8 (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB1270 PE=2 SV=2)
HSP 1 Score: 64.3 bits (155), Expect = 3.1e-09
Identity = 54/277 (19.49%), Postives = 126/277 (45.49%), Query Frame = 0
Query: 2 PVLAKEIFLELKSEGFPLNNSTLSTLMVH-YIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 61
P A ++ + +++GF S + T ++ Y L +A+++ + S P ++ +
Sbjct: 732 PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 791
Query: 62 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 121
L +AY + G ++ + + E+ ++ + + +LE + + E+
Sbjct: 792 SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 851
Query: 122 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 181
GF ++ S+ + ++ G++ E++ Y +K + +L + + M + K K R
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIR-LYRMMIELLCKGKRVRD 911
Query: 182 GEFL-RDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRAL 241
E + ++ V +WN +L Y A K + + ++ E G PD TT+N +
Sbjct: 912 AEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLII 971
Query: 242 AFSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAY 277
+ R + +L ++ M+++ ++P L TY ++ A+
Sbjct: 972 MYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
BLAST of HG10006146 vs. ExPASy TrEMBL
Match:
A0A1S3BP30 (pentatricopeptide repeat-containing protein At3g42630-like OS=Cucumis melo OX=3656 GN=LOC103492176 PE=4 SV=1)
HSP 1 Score: 664.8 bits (1714), Expect = 1.9e-187
Identity = 328/354 (92.66%), Postives = 342/354 (96.61%), Query Frame = 0
Query: 1 MPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 60
MP LAKEIFLELKSEGFPLNNSTLST+MVHYID G PLQAQA+WEEMLNS FEPSVQVIS
Sbjct: 72 MPTLAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVIS 131
Query: 61 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 120
KLFNAYGKMGHFD IT+VL QVKLRYSHLLPEAYSLAISCFGK+KQLELMESTLREMV S
Sbjct: 132 KLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSS 191
Query: 121 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
GF VNS+TGNSFI+YYSMFGSL+EMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL
Sbjct: 192 GFTVNSATGNSFIIYYSMFGSLLEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 251
Query: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA
Sbjct: 252 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 311
Query: 241 FSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPIS 300
FSRMDLLWDLHLSLEHMKHM IEPDLVTYGCVVDAY+DRRLGRNL+F+LSKMNP QPP+S
Sbjct: 312 FSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPVQPPVS 371
Query: 301 LTDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
LTD FVFEALGKGDFHMSSEAFMQ ++QKKWTYRELISLYLKKQHRR+QVFWNY
Sbjct: 372 LTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKQHRRNQVFWNY 425
BLAST of HG10006146 vs. ExPASy TrEMBL
Match:
A0A5D3CAE3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00220 PE=4 SV=1)
HSP 1 Score: 664.8 bits (1714), Expect = 1.9e-187
Identity = 328/354 (92.66%), Postives = 342/354 (96.61%), Query Frame = 0
Query: 1 MPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 60
MP LAKEIFLELKSEGFPLNNSTLST+MVHYID G PLQAQA+WEEMLNS FEPSVQVIS
Sbjct: 1 MPTLAKEIFLELKSEGFPLNNSTLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVIS 60
Query: 61 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 120
KLFNAYGKMGHFD IT+VL QVKLRYSHLLPEAYSLAISCFGK+KQLELMESTLREMV S
Sbjct: 61 KLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSS 120
Query: 121 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
GF VNS+TGNSFI+YYSMFGSL+EMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL
Sbjct: 121 GFTVNSATGNSFIIYYSMFGSLLEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
Query: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA
Sbjct: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
Query: 241 FSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPIS 300
FSRMDLLWDLHLSLEHMKHM IEPDLVTYGCVVDAY+DRRLGRNL+F+LSKMNP QPP+S
Sbjct: 241 FSRMDLLWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPVQPPVS 300
Query: 301 LTDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
LTD FVFEALGKGDFHMSSEAFMQ ++QKKWTYRELISLYLKKQHRR+QVFWNY
Sbjct: 301 LTDSFVFEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKQHRRNQVFWNY 354
BLAST of HG10006146 vs. ExPASy TrEMBL
Match:
A0A6J1FC40 (pentatricopeptide repeat-containing protein At3g42630 OS=Cucurbita moschata OX=3662 GN=LOC111444056 PE=4 SV=1)
HSP 1 Score: 629.0 bits (1621), Expect = 1.2e-176
Identity = 312/353 (88.39%), Postives = 332/353 (94.05%), Query Frame = 0
Query: 2 PVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVISK 61
PVLA+EIFLELKSE FPLNNSTLS+LMV YIDGGL LQA+AIWEEMLNS F PSV VISK
Sbjct: 74 PVLAQEIFLELKSEDFPLNNSTLSSLMVRYIDGGLLLQAEAIWEEMLNSCFVPSVLVISK 133
Query: 62 LFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCSG 121
L N YGKM FDDI +VL QVKLRY HLLPEAYSLAISCFGK+ QLELME+TLREMV SG
Sbjct: 134 LLNTYGKMRRFDDIIKVLDQVKLRYLHLLPEAYSLAISCFGKHGQLELMENTLREMVSSG 193
Query: 122 FPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLG 181
PV+S TGNSFI YYS+FGSL+EMETAYGRLKRSRFLIEK+GI+AMAFAYIR+RKFYRLG
Sbjct: 194 VPVDSRTGNSFIAYYSIFGSLMEMETAYGRLKRSRFLIEKEGILAMAFAYIRERKFYRLG 253
Query: 182 EFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALAF 241
EFLRDVGL RKNVGN+LWNLLLLSYAANFKMKSLQREFL MVEAGFNPD+TTFNIRA+AF
Sbjct: 254 EFLRDVGLRRKNVGNMLWNLLLLSYAANFKMKSLQREFLAMVEAGFNPDITTFNIRAMAF 313
Query: 242 SRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPISL 301
SRMDLLWDLHLSLEHMKH+KIEPDLVTYGCVVDAY+DRRLGRNL+FVLSKMNP+QPPISL
Sbjct: 314 SRMDLLWDLHLSLEHMKHVKIEPDLVTYGCVVDAYVDRRLGRNLEFVLSKMNPDQPPISL 373
Query: 302 TDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
TDPFVFEALGKGDFHMSSEAFMQ Q+QKKWTYRELISLYLKKQHRRDQVFWNY
Sbjct: 374 TDPFVFEALGKGDFHMSSEAFMQFQKQKKWTYRELISLYLKKQHRRDQVFWNY 426
BLAST of HG10006146 vs. ExPASy TrEMBL
Match:
A0A6J1D9V6 (pentatricopeptide repeat-containing protein At3g42630 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018218 PE=4 SV=1)
HSP 1 Score: 624.4 bits (1609), Expect = 2.9e-175
Identity = 308/354 (87.01%), Postives = 335/354 (94.63%), Query Frame = 0
Query: 1 MPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 60
+PVLA+EIF ELKSEG PL NSTLSTLM YIDGG LQAQAIWEEMLNSSF PSV +IS
Sbjct: 10 LPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWEEMLNSSFVPSVNLIS 69
Query: 61 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 120
KLF+ +GKMG FDDI +VL QVKLRYSHLLPEA+SLAISCFGK+ QLELME+TLREMV S
Sbjct: 70 KLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELMENTLREMVSS 129
Query: 121 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
GFPVNS+TGNSFI++YS+FGSL+EMETAYGRLKRSRFLIEK+GIMAMAFAY+RKRKFYRL
Sbjct: 130 GFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAYLRKRKFYRL 189
Query: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
GEFLRDVGLGR+NVGNLLWNLLLLSYAANFKMKSLQREFL+MVEAGF+PDLTTFNIRALA
Sbjct: 190 GEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDLTTFNIRALA 249
Query: 241 FSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPIS 300
FSRMDLLWDLHLSLEHM+H+KIEPDLVTYGCVVDAY+DRRLGRNLDF LSKMNP+Q P+S
Sbjct: 250 FSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDFALSKMNPDQTPVS 309
Query: 301 LTDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
LT+ FVFEALGKGDFHMSSEAFMQ QRQKKWTYRELISLYLK+Q+RRDQVFWNY
Sbjct: 310 LTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRRDQVFWNY 363
BLAST of HG10006146 vs. ExPASy TrEMBL
Match:
A0A6J1D726 (pentatricopeptide repeat-containing protein At3g42630 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018218 PE=4 SV=1)
HSP 1 Score: 624.4 bits (1609), Expect = 2.9e-175
Identity = 308/354 (87.01%), Postives = 335/354 (94.63%), Query Frame = 0
Query: 1 MPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 60
+PVLA+EIF ELKSEG PL NSTLSTLM YIDGG LQAQAIWEEMLNSSF PSV +IS
Sbjct: 69 LPVLAQEIFWELKSEGSPLKNSTLSTLMESYIDGGRLLQAQAIWEEMLNSSFVPSVNLIS 128
Query: 61 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 120
KLF+ +GKMG FDDI +VL QVKLRYSHLLPEA+SLAISCFGK+ QLELME+TLREMV S
Sbjct: 129 KLFHTFGKMGRFDDIIKVLDQVKLRYSHLLPEAFSLAISCFGKHGQLELMENTLREMVSS 188
Query: 121 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
GFPVNS+TGNSFI++YS+FGSL+EMETAYGRLKRSRFLIEK+GIMAMAFAY+RKRKFYRL
Sbjct: 189 GFPVNSATGNSFIIHYSIFGSLMEMETAYGRLKRSRFLIEKEGIMAMAFAYLRKRKFYRL 248
Query: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
GEFLRDVGLGR+NVGNLLWNLLLLSYAANFKMKSLQREFL+MVEAGF+PDLTTFNIRALA
Sbjct: 249 GEFLRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFLRMVEAGFHPDLTTFNIRALA 308
Query: 241 FSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPIS 300
FSRMDLLWDLHLSLEHM+H+KIEPDLVTYGCVVDAY+DRRLGRNLDF LSKMNP+Q P+S
Sbjct: 309 FSRMDLLWDLHLSLEHMEHVKIEPDLVTYGCVVDAYVDRRLGRNLDFALSKMNPDQTPVS 368
Query: 301 LTDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
LT+ FVFEALGKGDFHMSSEAFMQ QRQKKWTYRELISLYLK+Q+RRDQVFWNY
Sbjct: 369 LTESFVFEALGKGDFHMSSEAFMQFQRQKKWTYRELISLYLKRQYRRDQVFWNY 422
BLAST of HG10006146 vs. TAIR 10
Match:
AT3G42630.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 428.7 bits (1101), Expect = 4.5e-120
Identity = 207/354 (58.47%), Postives = 268/354 (75.71%), Query Frame = 0
Query: 1 MPVLAKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 60
+P +A EIFL+ KS N TL LM+ + + G L+A+ IW+E++NS F P V V+S
Sbjct: 62 LPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEIINSCFVPDVFVVS 121
Query: 61 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 120
KL +AY + G FD++ ++ V R+S LLP SLAISCFGKN QLELME + EM
Sbjct: 122 KLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQLELMEGVIEEMDSK 181
Query: 121 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 180
G + + T N + YYS FGSL +ME AYGR+K+ +IE++ I A+ AY+++RKFYRL
Sbjct: 182 GVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRAVVLAYLKQRKFYRL 241
Query: 181 GEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALA 240
EFL DVGLGR+N+GN+LWN +LLSYAA+FKMKSLQREF+ M++AGF+PDLTTFNIRALA
Sbjct: 242 REFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAGFSPDLTTFNIRALA 301
Query: 241 FSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPNQPPIS 300
FSRM L WDLHL+LEHM+ + I PDLVT+GCVVDAY+D+RL RNL+FV ++MN + P+
Sbjct: 302 FSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLEFVYNRMNLDDSPLV 361
Query: 301 LTDPFVFEALGKGDFHMSSEAFMQLQRQKKWTYRELISLYLKKQHRRDQVFWNY 355
LTDP FE LGKGDFH+SSEA ++ +K WTYR+LI +YLKK+ RRDQ+FWNY
Sbjct: 362 LTDPLAFEVLGKGDFHLSSEAVLEFSPRKNWTYRKLIGVYLKKKLRRDQIFWNY 415
BLAST of HG10006146 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14
Identity = 78/353 (22.10%), Postives = 144/353 (40.79%), Query Frame = 0
Query: 5 AKEIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVISKLFN 64
A E+ ++ +G + T +TL+ + G A +I+EEM N+ +P++ +
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 65 AYGKMGHFDDITEVLAQVKLRYSHLLPE--AYSLAISCFGKNKQLELMESTLREMVCSGF 124
YG G F ++ ++ ++ + L P+ ++ ++ FG+N + +EM +GF
Sbjct: 428 MYGNRGKFTEMMKIFDEINV--CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 487
Query: 125 PVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGE 184
T N+ I YS GS + T Y R+ + + + A R + + +
Sbjct: 488 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 547
Query: 185 FLRDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAG-FNPDLTTFNIRALAF 244
L ++ GR L + LL +Y AN K L + V +G P L
Sbjct: 548 VLAEMEDGRCKPNELTYCSLLHAY-ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 607
Query: 245 SRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPN--QPPI 304
S+ DLL + + +K PD+ T +V Y R++ + VL M P +
Sbjct: 608 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 667
Query: 305 SLTDPFVFEALGKGDFHMSSEAFMQLQ----RQKKWTYRELISLYLKKQHRRD 349
+ + ++ DF S E ++ + +Y +I Y + RD
Sbjct: 668 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRD 717
BLAST of HG10006146 vs. TAIR 10
Match:
AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 75.5 bits (184), Expect = 9.7e-14
Identity = 64/312 (20.51%), Postives = 134/312 (42.95%), Query Frame = 0
Query: 7 EIFLELKSEGFPLNNSTLSTLMVHYIDGGLPLQAQAIWEEMLNSSFEPSVQVISKLFNAY 66
++ ++KS G N +T +T++ + G+ ++ EM + FEP + L +AY
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 67 GKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCSGFPVNS 126
G+ G D +++ ++ + Y+ ++ + E+ + +M GF
Sbjct: 502 GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTE 561
Query: 127 STGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRD 186
++ + + Y+ G+ + +E R+K + + + A + R L R
Sbjct: 562 TSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR---ALAGSERA 621
Query: 187 VGLGRKN---VGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRALAFSR 246
L +K+ +++N +L + N + + E G +PDL T+N + R
Sbjct: 622 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 681
Query: 247 MDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAYLDRRLGRNLDFVLSKMNPN--QPPISL 306
W L+ ++ +++PDLV+Y V+ + R L + +LS+M +P I
Sbjct: 682 RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFT 741
Query: 307 TDPFV--FEALG 312
+ FV + A+G
Sbjct: 742 YNTFVSGYTAMG 750
BLAST of HG10006146 vs. TAIR 10
Match:
AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 74.3 bits (181), Expect = 2.2e-13
Identity = 75/315 (23.81%), Postives = 139/315 (44.13%), Query Frame = 0
Query: 37 PLQAQAIWEEMLNSSFEPSVQVISKLFNAYGKMGHFDDITEVLAQVKLRYSHLLPE--AY 96
P QA ++E ML+ +P++ V + L + YGK D L +K S P+ +
Sbjct: 160 PDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMK-SVSDCKPDVFTF 219
Query: 97 SLAISCFGKNKQLELMESTLREMVCSGFPVNSSTGNSFIVYYSMFGSLIEMETAYG-RLK 156
++ ISC K + +L++S + EM G ++ T N+ I Y G EME+ ++
Sbjct: 220 TVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIE 279
Query: 157 RSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRDVGLGRKNVGNLLWNLLLLSYAANFKMK 216
L + + ++ +Y R ++ + L +N+L+LS+ K
Sbjct: 280 DGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYK 339
Query: 217 SLQREFLQMVEAGFNPDLTTFNIRALAFSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVV 276
+ M + F+ T+NI F + + + MK+ ++P+ +TY +V
Sbjct: 340 KMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLV 399
Query: 277 DAYLDRRLGRNLDFVLSKMNPNQPPISLTDPF---VFEALGK-GDFHMSSEAFMQLQRQK 336
+AY L +D VL ++ + + L PF + A G+ GD E ++Q++ +K
Sbjct: 400 NAYSKAGLVVKIDSVLRQIVNSD--VVLDTPFFNCIINAYGQAGDLATMKELYIQMEERK 459
Query: 337 ----KWTYRELISLY 341
K T+ +I Y
Sbjct: 460 CKPDKITFATMIKTY 471
BLAST of HG10006146 vs. TAIR 10
Match:
AT3G18110.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 64.3 bits (155), Expect = 2.2e-10
Identity = 54/277 (19.49%), Postives = 126/277 (45.49%), Query Frame = 0
Query: 2 PVLAKEIFLELKSEGFPLNNSTLSTLMVH-YIDGGLPLQAQAIWEEMLNSSFEPSVQVIS 61
P A ++ + +++GF S + T ++ Y L +A+++ + S P ++ +
Sbjct: 732 PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 791
Query: 62 KLFNAYGKMGHFDDITEVLAQVKLRYSHLLPEAYSLAISCFGKNKQLELMESTLREMVCS 121
L +AY + G ++ + + E+ ++ + + +LE + + E+
Sbjct: 792 SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 851
Query: 122 GFPVNSSTGNSFIVYYSMFGSLIEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRL 181
GF ++ S+ + ++ G++ E++ Y +K + +L + + M + K K R
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIR-LYRMMIELLCKGKRVRD 911
Query: 182 GEFL-RDVGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVEAGFNPDLTTFNIRAL 241
E + ++ V +WN +L Y A K + + ++ E G PD TT+N +
Sbjct: 912 AEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLII 971
Query: 242 AFSRMDLLWDLHLSLEHMKHMKIEPDLVTYGCVVDAY 277
+ R + +L ++ M+++ ++P L TY ++ A+
Sbjct: 972 MYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038891045.1 | 5.4e-192 | 94.63 | pentatricopeptide repeat-containing protein At3g42630 [Benincasa hispida] >XP_03... | [more] |
XP_011648974.1 | 4.0e-187 | 92.09 | pentatricopeptide repeat-containing protein At3g42630 [Cucumis sativus] | [more] |
XP_008450656.1 | 4.0e-187 | 92.66 | PREDICTED: pentatricopeptide repeat-containing protein At3g42630-like [Cucumis m... | [more] |
KAA0047593.1 | 4.0e-187 | 92.66 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08252... | [more] |
KAE8651691.1 | 4.0e-187 | 92.09 | hypothetical protein Csa_006211 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Q9M2A1 | 6.4e-119 | 58.47 | Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana OX... | [more] |
Q9LYZ9 | 1.6e-13 | 22.10 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
O64624 | 1.4e-12 | 20.51 | Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... | [more] |
Q9SCP4 | 3.0e-12 | 23.81 | Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX... | [more] |
Q5G1S8 | 3.1e-09 | 19.49 | Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3BP30 | 1.9e-187 | 92.66 | pentatricopeptide repeat-containing protein At3g42630-like OS=Cucumis melo OX=36... | [more] |
A0A5D3CAE3 | 1.9e-187 | 92.66 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1FC40 | 1.2e-176 | 88.39 | pentatricopeptide repeat-containing protein At3g42630 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1D9V6 | 2.9e-175 | 87.01 | pentatricopeptide repeat-containing protein At3g42630 isoform X2 OS=Momordica ch... | [more] |
A0A6J1D726 | 2.9e-175 | 87.01 | pentatricopeptide repeat-containing protein At3g42630 isoform X1 OS=Momordica ch... | [more] |
Match Name | E-value | Identity | Description | |
AT3G42630.1 | 4.5e-120 | 58.47 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G02860.1 | 1.1e-14 | 22.10 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G18940.1 | 9.7e-14 | 20.51 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G53170.1 | 2.2e-13 | 23.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G18110.1 | 2.2e-10 | 19.49 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |