HG10006027 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006027
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	transcription factor MYB90-like
Location	Chr07: 11851006 .. 11851491 (-)
RNA-Seq Expression	HG10006027
Synteny	HG10006027

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGATTTTTGCAACTATCCTTTTTGTTTTTGGTGTGTTAGGTGGTCAATCATTGCTGGAAGATTACCAGGAAGAACAGCAAATGACATAAAGAACTATTGGAATTGCCATTTGAGCAAAAAGTTGAATGGTCAAGGAGTTGAGAAGCCAAATTCGACAAAAGAAGGAGCCATTTTTGGCAAACCACCAAAGTGGAAGCCTTTTCAAGAAGAAGAGAGCAGCAAATCAAAAGGAAAAGAATATGTTGATGAGCAAAATGGAGAAATTAGCCAAGGAATATTGGTACAAAATCAGAATCAAAACTTACCAATTGTTGTTGAAAAAAATAGTAGCATGAGTTCGGGAAATAATATTCAAATGGACTTCCAATTTGATCAACAAGAAGCTGTGGTCAAAGCAATGGAGGATGAAGATGGCTGCAACAAGAGGGAGCTTTGGGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGA

mRNA sequence

ATGCTAGATTTTTGCAACTATCCTTTTTGTTTTTGGTGTGTTAGGTGGTCAATCATTGCTGGAAGATTACCAGGAAGAACAGCAAATGACATAAAGAACTATTGGAATTGCCATTTGAGCAAAAAGTTGAATGGTCAAGGAGTTGAGAAGCCAAATTCGACAAAAGAAGGAGCCATTTTTGGCAAACCACCAAAGTGGAAGCCTTTTCAAGAAGAAGAGAGCAGCAAATCAAAAGGAAAAGAATATGTTGATGAGCAAAATGGAGAAATTAGCCAAGGAATATTGGTACAAAATCAGAATCAAAACTTACCAATTGTTGTTGAAAAAAATAGTAGCATGAGTTCGGGAAATAATATTCAAATGGACTTCCAATTTGATCAACAAGAAGCTGTGGTCAAAGCAATGGAGGATGAAGATGGCTGCAACAAGAGGGAGCTTTGGGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGA

Coding sequence (CDS)

ATGCTAGATTTTTGCAACTATCCTTTTTGTTTTTGGTGTGTTAGGTGGTCAATCATTGCTGGAAGATTACCAGGAAGAACAGCAAATGACATAAAGAACTATTGGAATTGCCATTTGAGCAAAAAGTTGAATGGTCAAGGAGTTGAGAAGCCAAATTCGACAAAAGAAGGAGCCATTTTTGGCAAACCACCAAAGTGGAAGCCTTTTCAAGAAGAAGAGAGCAGCAAATCAAAAGGAAAAGAATATGTTGATGAGCAAAATGGAGAAATTAGCCAAGGAATATTGGTACAAAATCAGAATCAAAACTTACCAATTGTTGTTGAAAAAAATAGTAGCATGAGTTCGGGAAATAATATTCAAATGGACTTCCAATTTGATCAACAAGAAGCTGTGGTCAAAGCAATGGAGGATGAAGATGGCTGCAACAAGAGGGAGCTTTGGGATGATTGGATCTCAGAGATGGATCTTTGGATTGATTCTTTGTGA

Protein sequence

MLDFCNYPFCFWCVRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGKEYVDEQNGEISQGILVQNQNQNLPIVVEKNSSMSSGNNIQMDFQFDQQEAVVKAMEDEDGCNKRELWDDWISEMDLWIDSL

Homology

[Close]

BLAST of HG10006027 vs. NCBI nr
Match: XP_038891035.1 (transcription factor MYB1-like [Benincasa hispida])

HSP 1 Score: 252.3 bits (643), Expect = 2.8e-63
Identity = 130/148 (87.84%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEES 74
           RWSIIAGRLPGRTANDIKNYWNCHLSK+LNGQGVEK NSTKE  IFGKPPKWKP Q EES
Sbjct: 77  RWSIIAGRLPGRTANDIKNYWNCHLSKRLNGQGVEKSNSTKEATIFGKPPKWKPLQ-EES 136

Query: 75  SKSKGKEYVDEQNGEISQGILVQ-NQNQNLPIVVEKNSSMSSGNNIQMDFQFDQQEAVVK 134
           SKSKGKEYVD+QNGEISQGILVQ N NQNLPIVVE+NSSMS G ++QMDF+FDQQ  VVK
Sbjct: 137 SKSKGKEYVDDQNGEISQGILVQNNDNQNLPIVVEQNSSMSLG-DMQMDFRFDQQ--VVK 196

Query: 135 AMEDEDGCNKRELWDDWISEMDLWIDSL 162
           AMEDEDG NKRELWDDWISEMDLWIDSL
Sbjct: 197 AMEDEDGYNKRELWDDWISEMDLWIDSL 220

[Close]

BLAST of HG10006027 vs. NCBI nr
Match: XP_008441809.1 (PREDICTED: transcription factor MYB90-like [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 7.2e-59
Identity = 126/151 (83.44%), Postives = 134/151 (88.74%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEES 74
           RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ VEKPNS K+G+IFGKP KWKP Q EES
Sbjct: 77  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQVVEKPNSIKQGSIFGKPSKWKPLQ-EES 136

Query: 75  SKSKGKEYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNSSMSSGNNIQMD-FQFDQQEA 134
           SKSKGKEYV  D+QN   SQGILV+ NQNQN PIV+E+NSSMS G N+QMD FQFDQQ  
Sbjct: 137 SKSKGKEYVDDDDQNNNESQGILVENNQNQNTPIVIEQNSSMSLG-NMQMDLFQFDQQ-- 196

Query: 135 VVKAMEDEDGCNKRELWDDWISEMDLWIDSL 162
           V+KAMEDEDGCNKRELWDDWISEMDLWIDSL
Sbjct: 197 VLKAMEDEDGCNKRELWDDWISEMDLWIDSL 223

[Close]

BLAST of HG10006027 vs. NCBI nr
Match: XP_004138976.1 (transcription factor MYB1-like [Cucumis sativus] >KAE8651728.1 hypothetical protein Csa_006721 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 6.1e-58
Identity = 126/150 (84.00%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEES 74
           RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEG+ FGK  KWKP Q EES
Sbjct: 77  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGSNFGKQSKWKPLQ-EES 136

Query: 75  SKSKGKEYVDEQNGEISQGILVQ-NQNQNL-PIVVEKNSSMSSGNNIQMD-FQFDQQEAV 134
           SKSKGKEYVD+     SQGILVQ NQNQN  PIVVE+NSSMS G N+QMD FQFDQQ  V
Sbjct: 137 SKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQNSSMSLG-NMQMDLFQFDQQ--V 196

Query: 135 VKAMEDEDGCNKRELWDDWISEMDLWIDSL 162
           +KAMEDEDGC+KRELWDDWISEMDLWIDSL
Sbjct: 197 LKAMEDEDGCSKRELWDDWISEMDLWIDSL 222

[Close]

BLAST of HG10006027 vs. NCBI nr
Match: KAA0051303.1 (transcription factor MYB90-like [Cucumis melo var. makuwa])

HSP 1 Score: 221.9 bits (564), Expect = 4.1e-54
Identity = 119/145 (82.07%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 21  GRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGK 80
           GRLPGRTANDIKNYWNCHLSKKLNGQ VEK NS K+G+IFGKP KWKP Q EESSKSKGK
Sbjct: 58  GRLPGRTANDIKNYWNCHLSKKLNGQVVEKSNSVKQGSIFGKPSKWKPLQ-EESSKSKGK 117

Query: 81  EYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNSSMSSGNNIQMD-FQFDQQEAVVKAME 140
           EYV  D+QN   SQGILV+ NQNQN PIV+E+NSSMS G N+QMD FQFDQQ  V+KAME
Sbjct: 118 EYVDDDDQNNNESQGILVENNQNQNTPIVIEQNSSMSLG-NMQMDLFQFDQQ--VLKAME 177

Query: 141 DEDGCNKRELWDDWISEMDLWIDSL 162
           DEDGCNKRELWDDWISEMDLWIDSL
Sbjct: 178 DEDGCNKRELWDDWISEMDLWIDSL 198

[Close]

BLAST of HG10006027 vs. NCBI nr
Match: XP_022997553.1 (transcription factor MYB1-like [Cucurbita maxima])

HSP 1 Score: 193.0 bits (489), Expect = 2.0e-45
Identity = 104/149 (69.80%), Postives = 115/149 (77.18%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPNSTKEGAIFGKPPKWKPFQEE 74
           RWSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KPNST          KWKP Q E
Sbjct: 77  RWSIIAGRLPGRTANDIKNYWNCHLSKKVNGHQGGDQKPNST----------KWKPIQ-E 136

Query: 75  ESSKSKGKEYVDEQNGEISQGILVQNQNQNLPIVVEKNSSMSSGNNIQMDFQFDQQEAVV 134
           ESSKSK KEY+++QNGE  QGIL+QNQNQN+PIV +  S      NIQMD+QFDQ+   V
Sbjct: 137 ESSKSKEKEYIEDQNGE-KQGILIQNQNQNVPIVEQSGSIRM--ENIQMDYQFDQE---V 196

Query: 135 KAMEDEDGCNKRELWDDWISEMDLWIDSL 162
            AM D DGCNKRELWDDW+SEMDLWIDSL
Sbjct: 197 VAMADGDGCNKRELWDDWVSEMDLWIDSL 208

[Close]

BLAST of HG10006027 vs. ExPASy Swiss-Prot
Match: Q9FNV9 (Transcription factor MYB113 OS=Arabidopsis thaliana OX=3702 GN=MYB113 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-09
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKK 43
           RWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 84  RWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of HG10006027 vs. ExPASy Swiss-Prot
Match: Q9FNV8 (Transcription factor MYB114 OS=Arabidopsis thaliana OX=3702 GN=MYB114 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-09
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKK 43
           RWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 84  RWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of HG10006027 vs. ExPASy Swiss-Prot
Match: Q9FE25 (Transcription factor MYB75 OS=Arabidopsis thaliana OX=3702 GN=MYB75 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-09
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKK 43
           RWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 84  RWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of HG10006027 vs. ExPASy Swiss-Prot
Match: Q9LTF7 (Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-09
Identity = 33/73 (45.21%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEES 74
           RWS+IAGRLPGRT N++KNYWN HL+KK N +    P    E  +   P   KP    E 
Sbjct: 88  RWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQNAP----ESIVGATPFTDKPVMSTEL 147

Query: 75  SKSKGKEYVDEQN 88
            +S G+   +E N
Sbjct: 148 RRSHGEGGEEESN 156

[Close]

BLAST of HG10006027 vs. ExPASy Swiss-Prot
Match: Q9ZTC3 (Transcription factor MYB90 OS=Arabidopsis thaliana OX=3702 GN=MYB90 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-09
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKK 43
           RWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 84  RWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of HG10006027 vs. ExPASy TrEMBL
Match: A0A1S3B4A4 (transcription factor MYB90-like OS=Cucumis melo OX=3656 GN=LOC103485861 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.5e-59
Identity = 126/151 (83.44%), Postives = 134/151 (88.74%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEES 74
           RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ VEKPNS K+G+IFGKP KWKP Q EES
Sbjct: 77  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQVVEKPNSIKQGSIFGKPSKWKPLQ-EES 136

Query: 75  SKSKGKEYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNSSMSSGNNIQMD-FQFDQQEA 134
           SKSKGKEYV  D+QN   SQGILV+ NQNQN PIV+E+NSSMS G N+QMD FQFDQQ  
Sbjct: 137 SKSKGKEYVDDDDQNNNESQGILVENNQNQNTPIVIEQNSSMSLG-NMQMDLFQFDQQ-- 196

Query: 135 VVKAMEDEDGCNKRELWDDWISEMDLWIDSL 162
           V+KAMEDEDGCNKRELWDDWISEMDLWIDSL
Sbjct: 197 VLKAMEDEDGCNKRELWDDWISEMDLWIDSL 223

[Close]

BLAST of HG10006027 vs. ExPASy TrEMBL
Match: A0A5A7U600 (Transcription factor MYB90-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00110 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.0e-54
Identity = 119/145 (82.07%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 21  GRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEESSKSKGK 80
           GRLPGRTANDIKNYWNCHLSKKLNGQ VEK NS K+G+IFGKP KWKP Q EESSKSKGK
Sbjct: 58  GRLPGRTANDIKNYWNCHLSKKLNGQVVEKSNSVKQGSIFGKPSKWKPLQ-EESSKSKGK 117

Query: 81  EYV--DEQNGEISQGILVQ-NQNQNLPIVVEKNSSMSSGNNIQMD-FQFDQQEAVVKAME 140
           EYV  D+QN   SQGILV+ NQNQN PIV+E+NSSMS G N+QMD FQFDQQ  V+KAME
Sbjct: 118 EYVDDDDQNNNESQGILVENNQNQNTPIVIEQNSSMSLG-NMQMDLFQFDQQ--VLKAME 177

Query: 141 DEDGCNKRELWDDWISEMDLWIDSL 162
           DEDGCNKRELWDDWISEMDLWIDSL
Sbjct: 178 DEDGCNKRELWDDWISEMDLWIDSL 198

[Close]

BLAST of HG10006027 vs. ExPASy TrEMBL
Match: A0A6J1KE93 (transcription factor MYB1-like OS=Cucurbita maxima OX=3661 GN=LOC111492445 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 9.9e-46
Identity = 104/149 (69.80%), Postives = 115/149 (77.18%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPNSTKEGAIFGKPPKWKPFQEE 74
           RWSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KPNST          KWKP Q E
Sbjct: 77  RWSIIAGRLPGRTANDIKNYWNCHLSKKVNGHQGGDQKPNST----------KWKPIQ-E 136

Query: 75  ESSKSKGKEYVDEQNGEISQGILVQNQNQNLPIVVEKNSSMSSGNNIQMDFQFDQQEAVV 134
           ESSKSK KEY+++QNGE  QGIL+QNQNQN+PIV +  S      NIQMD+QFDQ+   V
Sbjct: 137 ESSKSKEKEYIEDQNGE-KQGILIQNQNQNVPIVEQSGSIRM--ENIQMDYQFDQE---V 196

Query: 135 KAMEDEDGCNKRELWDDWISEMDLWIDSL 162
            AM D DGCNKRELWDDW+SEMDLWIDSL
Sbjct: 197 VAMADGDGCNKRELWDDWVSEMDLWIDSL 208

[Close]

BLAST of HG10006027 vs. ExPASy TrEMBL
Match: A0A6J1EYC9 (transcription factor MYB1-like OS=Cucurbita moschata OX=3662 GN=LOC111440018 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 9.9e-46
Identity = 104/149 (69.80%), Postives = 115/149 (77.18%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVEKPNSTKEGAIFGKPPKWKPFQEE 74
           RWSIIAGRLPGRTANDIKNYWNCHLSKK+NG   G +KPNST          KWKP Q E
Sbjct: 77  RWSIIAGRLPGRTANDIKNYWNCHLSKKVNGHQGGDQKPNST----------KWKPIQ-E 136

Query: 75  ESSKSKGKEYVDEQNGEISQGILVQNQNQNLPIVVEKNSSMSSGNNIQMDFQFDQQEAVV 134
           ESSKSK KEYV++QNGE  QGIL+QNQNQN+PI+ +  S      NIQMD+QFDQ+   V
Sbjct: 137 ESSKSKEKEYVEDQNGE-KQGILIQNQNQNVPIIEQSGSIRM--ENIQMDYQFDQE---V 196

Query: 135 KAMEDEDGCNKRELWDDWISEMDLWIDSL 162
            AM D DGCNKRELWDDW+SEMDLWIDSL
Sbjct: 197 VAMADGDGCNKRELWDDWVSEMDLWIDSL 208

[Close]

BLAST of HG10006027 vs. ExPASy TrEMBL
Match: A0A6J1CTG0 (transcription factor WER-like OS=Momordica charantia OX=3673 GN=LOC111014133 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 9.5e-41
Identity = 104/161 (64.60%), Postives = 118/161 (73.29%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ--GVE--KPNSTKEGAIFGKPPKWKPFQ 74
           RWS+IAGRLPGRTANDIKNYWNCHLSKKLNGQ  GVE  + N TKE A FGKP  W+  Q
Sbjct: 77  RWSVIAGRLPGRTANDIKNYWNCHLSKKLNGQLGGVEDQQANPTKEEAFFGKPQNWEHPQ 136

Query: 75  EEES-SKSKGK----EYVDEQNGEISQG-ILVQNQNQNLPIVVEKNS-SMSSGNNIQMDF 134
           EE S S++KGK    ++    NGE SQ  ILVQNQNQNLPI+VE+ S SM S  N+QM+F
Sbjct: 137 EESSKSRAKGKTCAADHDQNINGENSQEMILVQNQNQNLPIIVEQQSNSMGSLGNLQMEF 196

Query: 135 QFDQQEAVVKAMED---EDGCNKRELWDDWISEMDLWIDSL 162
                    KA+ED   + GCNKRE+WDDWISEMDLWIDSL
Sbjct: 197 ---------KALEDDHHQQGCNKREVWDDWISEMDLWIDSL 228

[Close]

BLAST of HG10006027 vs. TAIR 10
Match: AT1G56650.1 (production of anthocyanin pigment 1 )

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKK 43
           RWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 84  RWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of HG10006027 vs. TAIR 10
Match: AT1G66370.1 (myb domain protein 113 )

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKK 43
           RWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 84  RWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of HG10006027 vs. TAIR 10
Match: AT1G66380.1 (myb domain protein 114 )

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKK 43
           RWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 84  RWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of HG10006027 vs. TAIR 10
Match: AT1G66390.1 (myb domain protein 90 )

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKK 43
           RWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 84  RWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of HG10006027 vs. TAIR 10
Match: AT5G52600.1 (myb domain protein 82 )

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10
Identity = 33/73 (45.21%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 15  RWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGAIFGKPPKWKPFQEEES 74
           RWS+IAGRLPGRT N++KNYWN HL+KK N +    P    E  +   P   KP    E 
Sbjct: 88  RWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQNAP----ESIVGATPFTDKPVMSTEL 147

Query: 75  SKSKGKEYVDEQN 88
            +S G+   +E N
Sbjct: 148 RRSHGEGGEEESN 156

The following BLAST results are available for this feature:

BLAST of HG10006027 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891035.1	2.8e-63	87.84	transcription factor MYB1-like [Benincasa hispida]	[more]
XP_008441809.1	7.2e-59	83.44	PREDICTED: transcription factor MYB90-like [Cucumis melo]	[more]
XP_004138976.1	6.1e-58	84.00	transcription factor MYB1-like [Cucumis sativus] >KAE8651728.1 hypothetical prot...	[more]
KAA0051303.1	4.1e-54	82.07	transcription factor MYB90-like [Cucumis melo var. makuwa]	[more]
XP_022997553.1	2.0e-45	69.80	transcription factor MYB1-like [Cucurbita maxima]	[more]

BLAST of HG10006027 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNV9	3.2e-09	89.29	Transcription factor MYB113 OS=Arabidopsis thaliana OX=3702 GN=MYB113 PE=1 SV=1	[more]
Q9FNV8	3.2e-09	89.29	Transcription factor MYB114 OS=Arabidopsis thaliana OX=3702 GN=MYB114 PE=1 SV=1	[more]
Q9FE25	3.2e-09	89.29	Transcription factor MYB75 OS=Arabidopsis thaliana OX=3702 GN=MYB75 PE=1 SV=1	[more]
Q9LTF7	3.2e-09	45.21	Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1	[more]
Q9ZTC3	3.2e-09	89.29	Transcription factor MYB90 OS=Arabidopsis thaliana OX=3702 GN=MYB90 PE=1 SV=1	[more]

BLAST of HG10006027 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B4A4	3.5e-59	83.44	transcription factor MYB90-like OS=Cucumis melo OX=3656 GN=LOC103485861 PE=4 SV=...	[more]
A0A5A7U600	2.0e-54	82.07	Transcription factor MYB90-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6J1KE93	9.9e-46	69.80	transcription factor MYB1-like OS=Cucurbita maxima OX=3661 GN=LOC111492445 PE=4 ...	[more]
A0A6J1EYC9	9.9e-46	69.80	transcription factor MYB1-like OS=Cucurbita moschata OX=3662 GN=LOC111440018 PE=...	[more]
A0A6J1CTG0	9.5e-41	64.60	transcription factor WER-like OS=Momordica charantia OX=3673 GN=LOC111014133 PE=...	[more]

BLAST of HG10006027 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56650.1	2.3e-10	89.29	production of anthocyanin pigment 1	[more]
AT1G66370.1	2.3e-10	89.29	myb domain protein 113	[more]
AT1G66380.1	2.3e-10	89.29	myb domain protein 114	[more]
AT1G66390.1	2.3e-10	89.29	myb domain protein 90	[more]
AT5G52600.1	2.3e-10	45.21	myb domain protein 82	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 11..60 e-value: 1.8E-12 score: 49.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..84
None	No IPR available	PANTHER	PTHR47999	TRANSCRIPTION FACTOR MYB8-RELATED-RELATED	coord: 15..160
None	No IPR available	PANTHER	PTHR47999:SF20	MYB TRANSCRIPTION FACTOR	coord: 15..160
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 15..43 score: 12.593518
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 15..39 e-value: 4.2949E-5 score: 37.1698
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 14..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006027.1	HG10006027.1	mRNA