HG10005968 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005968
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Beta-glucosidase
Location	Chr07: 10164943 .. 10167472 (+)
RNA-Seq Expression	HG10005968
Synteny	HG10005968

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCAGGCAAGATTCTGGATGGCGGCAATGGTGATGTAGCGGTGGACCAATATCACAGATACAAGGTTGGTCAAGTTCACTCTTAAGAGTGTTCATCATTTATTTGGTTATCCTTCATTAGGATTGTTTCTAATAAAAATAGAAACATATTAACTTGTTCAAACTATATATTTCATTTATAGACACATGCAGGTTTTTTTATCCCCCCTCCTCCAACTTAAATACAATAATTACATTATTTATTTATATTTTATGTATGTTTAGGAAGATGTTGAACTTATAGCAAATTTGGGATTTGATGCTTACCGCTTTTCAATATCATGGTCCCGCATATTTCCTGGTATGTGCTTTATAAAATGTTCCCTGCATTTTTGCTGATATCAAAAGAATATTAGATACATTTGGTACACCATCTATATTGTAGATATCCATATAGACACCATAAAGGAAGAGGAGAAACATTAGTGTACAAATCTCAAACATTTAGATTTATGTTGCTAAAATATTATTGTCAGATTCAATTCCCTGGCAAAAGAAAAATATAGGTGGAAATAGACAAAGTCACAATAGTGTTTTTATTTTTCATTTTTTTTGAAAAGGAAACAAATCTTTTTATTGATATCGATATTAATATTGAACTCCTTTGGCTTGAACTTATTACCCTTTTTGGTAAATTTCATACATTAATAAAATTTGTTTCTTATATAATAAAAAAGATATTGACAATGAACTCTCACTAGTAGACTAGTATTATGGTAGCTAAAGCTACAACGCTCAAAAAAGGACAAAACGTCTATCGATATATCTGTAAATTAGAGGGTTTGACATCAATATTAAAGATTAATCACTAGCTTGAAAAGCTTTTCAAAATACTTTTATTTTAATCTTTTTATTATATTTATTATTTTTTTTATGGATAGCCAAACTTTGATTGAGAAGAAAATGAAAGAATACAAAAGCATAAAAAAACTAGAGCCCACAAAAAAACAAAAGTGAACTAAAAAGGAAAAGCCTCTAGTCAAGCAAGATAAAATTAAGCGGATAATTACAGGAAAATTTTTATAAATACCTATAAAACATATGAAAAATCGTCTATTAATCCTAATGTGAGCATACATACTAATATCAAGATTTATAAGATATTTTACCGATATATTCATATATCCGTAAATTGAAACCTAATATTATTATTGACATCGATATTTTAATCCTTGTCCTCAAGTTAGTGACTCAACAACGATAATATATTAGATTAGTAATTTAAGAGCGATATACCTAGATAATGTTTAATGCAAAGGCTCAAGAATATTAGTTATAGATGTGCCCGTCAACCGAGCAATAAGGAACTAAGGTTTCATCTTCCCCTTTTCTTCTTGTTTTGTGTGTGTTTTTGTGTGAAACATACTCAGGTTAGTTGAAGGGACAGCAAAACGTCAATGGATACCGTGAATGCTTGTCTTTCTTGTATTTCTGTGACCTCAGTTCAATTTGAACTGATCTTTGAAGAAAAGATAACTACATTTCTTGTAAAATATATAAATATGATGAAATAATACTTATGTGTATTATTTTTATCGTTTCATATTATGATTTCTTTATTTTCAAATTTCCATAATTTATTGCACTTTATAAACCTGTCAGGAACATTTCGTTCATGAGGAATTTTGTTCCACATCTTACATCCCTAATTGGTAACATGTTTATGATAAATATTTGCATTATTGTTGTTAAAAAACTGTTGAGATGAAGAAATTGGGACTTCAAAACCTATTTTCCTTTCCACTTCCAAGACCTGGTCCCAGTGGCAAGAGCATATGATGTTTAGAGGTTCTGTCCAAGGTGCTTGGGGTGAAGCCTCCTCAATAGAAAACTCAAAATTCTAAAACCCTTATTATCTCTTTGAGGTAGTCTTGGGATGAGCGAAGTCTCATGTTTGAGTGGGTCATGAGCATAATGAACAAGGAGTGAAGCCCTCCGATACCCTAGTTATTAAAAGGAAAACCATCTTTCTCTCCTCTTGTTATTGTGCTGTTTTTACTTCTATTTCCTCCAATCCTTTTGAAAAACTTCTGTAAATATACTATTTATCTATCCTTGGTTGTTTCCTTCCTGTTTTACCTTCCCTTTTTTTTCCTGGCCTTTTGAACCATCAGCATTCTGCTGTTTTCAATTCTTAGTATCACGACCATTCTAAGCACACAGTAATTATTCCCATTTAAAGTATATTTGTTGTTTTATTGCATTTTCTACTGACGAGCCTTTTCCTCTTTCAGATGGTTTGGGGACCAAAGTCAATGTTGAAGGGATTAATTACTACAATAACCTAATCAATGCACTTCTTGAAAAGGGTAAAAATCTCAACCTGTGAATTTCATTTTTAGCTCAGCCAGTGAAAAATTGGTTGAAGGATTTTAATTAATTAATTTTTTTTCAGGCATTCAGCCGTATGTAACATTGTATCATTGGGATCTTCCTTTGCATCTCCAGGAGGCAATTGGAGGGTGGCTAAATAAAGAAATTGTGTAA

mRNA sequence

ATGTCTGCAGGCAAGATTCTGGATGGCGGCAATGGTGATGTAGCGGTGGACCAATATCACAGATACAAGGAAGATGTTGAACTTATAGCAAATTTGGGATTTGATGCTTACCGCTTTTCAATATCATGGTCCCGCATATTTCCTGGCATTCAGCCGTATGTAACATTGTATCATTGGGATCTTCCTTTGCATCTCCAGGAGGCAATTGGAGGGTGGCTAAATAAAGAAATTGTGTAA

Coding sequence (CDS)

ATGTCTGCAGGCAAGATTCTGGATGGCGGCAATGGTGATGTAGCGGTGGACCAATATCACAGATACAAGGAAGATGTTGAACTTATAGCAAATTTGGGATTTGATGCTTACCGCTTTTCAATATCATGGTCCCGCATATTTCCTGGCATTCAGCCGTATGTAACATTGTATCATTGGGATCTTCCTTTGCATCTCCAGGAGGCAATTGGAGGGTGGCTAAATAAAGAAATTGTGTAA

Protein sequence

MSAGKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFPGIQPYVTLYHWDLPLHLQEAIGGWLNKEIV

Homology

[Close]

BLAST of HG10005968 vs. NCBI nr
Match: XP_038891025.1 (beta-glucosidase 42 [Benincasa hispida])

HSP 1 Score: 151.4 bits (381), Expect = 3.3e-33
Identity = 74/100 (74.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDGGNGDVAVDQYHRYKEDVELI+NLGFDAYRFSISWSRIFP               
Sbjct: 65  GKILDGGNGDVAVDQYHRYKEDVELISNLGFDAYRFSISWSRIFPDGLGTKVNVEGINYY 124

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                     GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV
Sbjct: 125 NNLINALLEKGIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 164

[Close]

BLAST of HG10005968 vs. NCBI nr
Match: XP_008441738.1 (PREDICTED: beta-glucosidase 42 isoform X2 [Cucumis melo])

HSP 1 Score: 149.8 bits (377), Expect = 9.6e-33
Identity = 73/100 (73.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP               
Sbjct: 65  GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFPDGLGTKVNLEGINYY 124

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                      IQPYVTLYHWDLPLHLQEAIGGWLNKE+V
Sbjct: 125 NNLINALLEKSIQPYVTLYHWDLPLHLQEAIGGWLNKEVV 164

[Close]

BLAST of HG10005968 vs. NCBI nr
Match: KAA0051438.1 (beta-glucosidase 42 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 9.6e-33
Identity = 73/100 (73.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP               
Sbjct: 351 GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFPDGLGTKVNLEGINYY 410

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                      IQPYVTLYHWDLPLHLQEAIGGWLNKE+V
Sbjct: 411 NNLINALLEKSIQPYVTLYHWDLPLHLQEAIGGWLNKEVV 450

[Close]

BLAST of HG10005968 vs. NCBI nr
Match: XP_016899504.1 (PREDICTED: beta-glucosidase 42 isoform X1 [Cucumis melo])

HSP 1 Score: 149.8 bits (377), Expect = 9.6e-33
Identity = 73/100 (73.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP               
Sbjct: 65  GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFPDGLGTKVNLEGINYY 124

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                      IQPYVTLYHWDLPLHLQEAIGGWLNKE+V
Sbjct: 125 NNLINALLEKSIQPYVTLYHWDLPLHLQEAIGGWLNKEVV 164

[Close]

BLAST of HG10005968 vs. NCBI nr
Match: XP_004138903.1 (beta-glucosidase 42 [Cucumis sativus] >KGN61355.1 hypothetical protein Csa_006425 [Cucumis sativus])

HSP 1 Score: 146.7 bits (369), Expect = 8.1e-32
Identity = 72/100 (72.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP               
Sbjct: 65  GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFPDGLGTKVNVEGINYY 124

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                      IQPYVTLYHWDLPLHLQEAI GWLNKE+V
Sbjct: 125 NNLINALLEKSIQPYVTLYHWDLPLHLQEAIEGWLNKEVV 164

[Close]

BLAST of HG10005968 vs. ExPASy Swiss-Prot
Match: Q9FIW4 (Beta-glucosidase 42 OS=Arabidopsis thaliana OX=3702 GN=BGLU42 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 9.3e-31
Identity = 65/100 (65.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDG NGDVAVD YHRYKEDV+LI  LGF AYRFSISWSRIFP               
Sbjct: 58  GKILDGSNGDVAVDHYHRYKEDVDLIGQLGFGAYRFSISWSRIFPDGLGTEVNEEGIAFY 117

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                     GIQPYVTLYHWDLP HLQEAIGGW N++IV
Sbjct: 118 NDLINTLLEKGIQPYVTLYHWDLPSHLQEAIGGWTNRKIV 157

[Close]

BLAST of HG10005968 vs. ExPASy Swiss-Prot
Match: Q5N863 (Beta-glucosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU4 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-25
Identity = 54/99 (54.55%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 5   KILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP---------------- 64
           +ILDG +G+VAVD YHRYKED+EL+A+LGF AYRFSISW RIFP                
Sbjct: 53  RILDGSSGEVAVDHYHRYKEDIELMASLGFRAYRFSISWPRIFPDGLGKNVNEQGVAFYN 112

Query: 65  ---------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                    GI+PY TLYHWDLP +LQ+ +GGWL+ +IV
Sbjct: 113 DLINFMIEKGIEPYATLYHWDLPHNLQQTVGGWLSDKIV 151

[Close]

BLAST of HG10005968 vs. ExPASy Swiss-Prot
Match: Q0DA21 (Beta-glucosidase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU25 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 4.5e-25
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           G+++D  N DVAVD YHRYKEDVEL+ ++G DAYRFSISWSRIFP               
Sbjct: 62  GRVIDFSNADVAVDHYHRYKEDVELMNDIGMDAYRFSISWSRIFPNGTGEPNEEGLSYYN 121

Query: 64  ---------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                    GI+PYVTL+HWDLP  L++  GGWLN EI+
Sbjct: 122 SLIDALLDKGIEPYVTLFHWDLPQALEDRYGGWLNSEII 160

[Close]

BLAST of HG10005968 vs. ExPASy Swiss-Prot
Match: Q339X2 (Beta-glucosidase 34 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU34 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.9e-24
Identity = 51/99 (51.52%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKI+D  N DVAVDQYHR++ED++L+A++G DAYRFSISWSRIFP               
Sbjct: 75  GKIIDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSISWSRIFPNGTGEVNQAGIDHYN 134

Query: 64  ---------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                    GI+PYVTLYHWDLP  L++   GWL+++I+
Sbjct: 135 KLINALLAKGIEPYVTLYHWDLPQALEDKYTGWLDRQII 173

[Close]

BLAST of HG10005968 vs. ExPASy Swiss-Prot
Match: Q9FZE0 (Beta-glucosidase 40 OS=Arabidopsis thaliana OX=3702 GN=BGLU40 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.5e-24
Identity = 53/99 (53.54%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKI D  N DVAVDQYHRY+EDV+L+ N+G DAYRFSISW+RIFP               
Sbjct: 74  GKITDFSNADVAVDQYHRYEEDVQLMKNMGMDAYRFSISWTRIFPNGVGHINEAGIDHYN 133

Query: 64  ---------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                    GI+PYVTLYHWDLP  L +   GWLN +I+
Sbjct: 134 KLINALLAKGIEPYVTLYHWDLPQALHDRYLGWLNPQII 172

[Close]

BLAST of HG10005968 vs. ExPASy TrEMBL
Match: A0A5A7U840 (Beta-glucosidase 42 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001910 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.6e-33
Identity = 73/100 (73.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP               
Sbjct: 351 GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFPDGLGTKVNLEGINYY 410

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                      IQPYVTLYHWDLPLHLQEAIGGWLNKE+V
Sbjct: 411 NNLINALLEKSIQPYVTLYHWDLPLHLQEAIGGWLNKEVV 450

[Close]

BLAST of HG10005968 vs. ExPASy TrEMBL
Match: A0A1S4DU36 (Beta-glucosidase OS=Cucumis melo OX=3656 GN=LOC103485810 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.6e-33
Identity = 73/100 (73.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP               
Sbjct: 65  GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFPDGLGTKVNLEGINYY 124

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                      IQPYVTLYHWDLPLHLQEAIGGWLNKE+V
Sbjct: 125 NNLINALLEKSIQPYVTLYHWDLPLHLQEAIGGWLNKEVV 164

[Close]

BLAST of HG10005968 vs. ExPASy TrEMBL
Match: A0A1S3B454 (Beta-glucosidase OS=Cucumis melo OX=3656 GN=LOC103485810 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.6e-33
Identity = 73/100 (73.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP               
Sbjct: 65  GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFPDGLGTKVNLEGINYY 124

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                      IQPYVTLYHWDLPLHLQEAIGGWLNKE+V
Sbjct: 125 NNLINALLEKSIQPYVTLYHWDLPLHLQEAIGGWLNKEVV 164

[Close]

BLAST of HG10005968 vs. ExPASy TrEMBL
Match: A0A0A0LHE2 (Beta-glucosidase OS=Cucumis sativus OX=3659 GN=Csa_2G095930 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.9e-32
Identity = 72/100 (72.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP               
Sbjct: 65  GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFPDGLGTKVNVEGINYY 124

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                      IQPYVTLYHWDLPLHLQEAI GWLNKE+V
Sbjct: 125 NNLINALLEKSIQPYVTLYHWDLPLHLQEAIEGWLNKEVV 164

[Close]

BLAST of HG10005968 vs. ExPASy TrEMBL
Match: A0A6J1KHT3 (Beta-glucosidase OS=Cucurbita maxima OX=3661 GN=LOC111493363 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.5e-31
Identity = 71/100 (71.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           G ILDGGNGDVAVDQYHRY+EDVELIA LGF AYRFSISWSRIFP               
Sbjct: 64  GNILDGGNGDVAVDQYHRYEEDVELIAKLGFGAYRFSISWSRIFPDGLGTKVNVEGISYY 123

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                     GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV
Sbjct: 124 NNLINALLEKGIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 163

[Close]

BLAST of HG10005968 vs. TAIR 10
Match: AT5G36890.1 (beta glucosidase 42 )

HSP 1 Score: 133.7 bits (335), Expect = 6.6e-32
Identity = 65/100 (65.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDG NGDVAVD YHRYKEDV+LI  LGF AYRFSISWSRIFP               
Sbjct: 58  GKILDGSNGDVAVDHYHRYKEDVDLIGQLGFGAYRFSISWSRIFPDGLGTEVNEEGIAFY 117

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                     GIQPYVTLYHWDLP HLQEAIGGW N++IV
Sbjct: 118 NDLINTLLEKGIQPYVTLYHWDLPSHLQEAIGGWTNRKIV 157

[Close]

BLAST of HG10005968 vs. TAIR 10
Match: AT5G36890.2 (beta glucosidase 42 )

HSP 1 Score: 133.7 bits (335), Expect = 6.6e-32
Identity = 65/100 (65.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILDG NGDVAVD YHRYKEDV+LI  LGF AYRFSISWSRIFP               
Sbjct: 58  GKILDGSNGDVAVDHYHRYKEDVDLIGQLGFGAYRFSISWSRIFPDGLGTEVNEEGIAFY 117

Query: 64  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                     GIQPYVTLYHWDLP HLQEAIGGW N++IV
Sbjct: 118 NDLINTLLEKGIQPYVTLYHWDLPSHLQEAIGGWTNRKIV 157

[Close]

BLAST of HG10005968 vs. TAIR 10
Match: AT1G26560.1 (beta glucosidase 40 )

HSP 1 Score: 110.9 bits (276), Expect = 4.6e-25
Identity = 53/99 (53.54%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKI D  N DVAVDQYHRY+EDV+L+ N+G DAYRFSISW+RIFP               
Sbjct: 74  GKITDFSNADVAVDQYHRYEEDVQLMKNMGMDAYRFSISWTRIFPNGVGHINEAGIDHYN 133

Query: 64  ---------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                    GI+PYVTLYHWDLP  L +   GWLN +I+
Sbjct: 134 KLINALLAKGIEPYVTLYHWDLPQALHDRYLGWLNPQII 172

[Close]

BLAST of HG10005968 vs. TAIR 10
Match: AT5G54570.1 (beta glucosidase 41 )

HSP 1 Score: 103.6 bits (257), Expect = 7.3e-23
Identity = 49/99 (49.49%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 4   GKILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP--------------- 63
           GKILD  N D  VDQYHR+  D++L+ +L  DAYRFSISWSRIFP               
Sbjct: 73  GKILDFSNADTTVDQYHRFHNDIDLMKDLRMDAYRFSISWSRIFPNGTGEVNPDGVKYYN 132

Query: 64  ---------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                    GI+PYVTLYHWDLP  L++   GWL++E+V
Sbjct: 133 SLIDALLAKGIKPYVTLYHWDLPQALEDRYEGWLSREVV 171

[Close]

BLAST of HG10005968 vs. TAIR 10
Match: AT5G42260.1 (beta glucosidase 12 )

HSP 1 Score: 97.4 bits (241), Expect = 5.3e-21
Identity = 47/100 (47.00%), Postives = 57/100 (57.00%), Query Frame = 0


Query: 5   KILDGGNGDVAVDQYHRYKEDVELIANLGFDAYRFSISWSRIFP---------------- 64
           KI DG NG +A D YH YKEDV L+  +GFDAYRFSISWSRI P                
Sbjct: 75  KIKDGSNGSIASDSYHLYKEDVGLLHQIGFDAYRFSISWSRILPRENLKGGINQAGIDYY 134

Query: 65  ----------GIQPYVTLYHWDLPLHLQEAIGGWLNKEIV 79
                     GI+P+ T++HWD P  L++A GG+L  EIV
Sbjct: 135 NNLINELLSKGIKPFATIFHWDTPQSLEDAYGGFLGAEIV 174

The following BLAST results are available for this feature:

BLAST of HG10005968 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891025.1	3.3e-33	74.00	beta-glucosidase 42 [Benincasa hispida]	[more]
XP_008441738.1	9.6e-33	73.00	PREDICTED: beta-glucosidase 42 isoform X2 [Cucumis melo]	[more]
KAA0051438.1	9.6e-33	73.00	beta-glucosidase 42 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_016899504.1	9.6e-33	73.00	PREDICTED: beta-glucosidase 42 isoform X1 [Cucumis melo]	[more]
XP_004138903.1	8.1e-32	72.00	beta-glucosidase 42 [Cucumis sativus] >KGN61355.1 hypothetical protein Csa_00642...	[more]

BLAST of HG10005968 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIW4	9.3e-31	65.00	Beta-glucosidase 42 OS=Arabidopsis thaliana OX=3702 GN=BGLU42 PE=2 SV=1	[more]
Q5N863	1.5e-25	54.55	Beta-glucosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU4 PE=2 SV=1	[more]
Q0DA21	4.5e-25	53.54	Beta-glucosidase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU25 PE=2 SV=2	[more]
Q339X2	2.9e-24	51.52	Beta-glucosidase 34 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU34 PE=2 SV=1	[more]
Q9FZE0	6.5e-24	53.54	Beta-glucosidase 40 OS=Arabidopsis thaliana OX=3702 GN=BGLU40 PE=2 SV=1	[more]

BLAST of HG10005968 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U840	4.6e-33	73.00	Beta-glucosidase 42 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S4DU36	4.6e-33	73.00	Beta-glucosidase OS=Cucumis melo OX=3656 GN=LOC103485810 PE=3 SV=1	[more]
A0A1S3B454	4.6e-33	73.00	Beta-glucosidase OS=Cucumis melo OX=3656 GN=LOC103485810 PE=3 SV=1	[more]
A0A0A0LHE2	3.9e-32	72.00	Beta-glucosidase OS=Cucumis sativus OX=3659 GN=Csa_2G095930 PE=3 SV=1	[more]
A0A6J1KHT3	2.5e-31	71.00	Beta-glucosidase OS=Cucurbita maxima OX=3661 GN=LOC111493363 PE=3 SV=1	[more]

BLAST of HG10005968 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36890.1	6.6e-32	65.00	beta glucosidase 42	[more]
AT5G36890.2	6.6e-32	65.00	beta glucosidase 42	[more]
AT1G26560.1	4.6e-25	53.54	beta glucosidase 40	[more]
AT5G54570.1	7.3e-23	49.49	beta glucosidase 41	[more]
AT5G42260.1	5.3e-21	47.00	beta glucosidase 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 50..78 e-value: 7.5E-11 score: 43.3
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 1..49 e-value: 3.8E-21 score: 76.9
None	No IPR available	PANTHER	PTHR10353:SF251	BNAC06G12100D PROTEIN	coord: 3..48
None	No IPR available	PANTHER	PTHR10353:SF251	BNAC06G12100D PROTEIN	coord: 49..78
IPR001360	Glycoside hydrolase family 1	PFAM	PF00232	Glyco_hydro_1	coord: 49..78 e-value: 2.0E-9 score: 36.4 coord: 3..48 e-value: 1.1E-18 score: 66.9
IPR001360	Glycoside hydrolase family 1	PANTHER	PTHR10353	GLYCOSYL HYDROLASE	coord: 49..78
IPR001360	Glycoside hydrolase family 1	PANTHER	PTHR10353	GLYCOSYL HYDROLASE	coord: 3..48
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 6..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005968.1	HG10005968.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0031349	positive regulation of defense response
biological_process	GO:0009617	response to bacterium
molecular_function	GO:0008422	beta-glucosidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds