HG10005887 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005887
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Queuine tRNA-ribosyltransferase accessory subunit 2
Location	Chr07: 7704622 .. 7709663 (-)
RNA-Seq Expression	HG10005887
Synteny	HG10005887

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTCGGTGTGAAGGCATGGAGCAACGGCAAGGCGCGCACCGGATTTCTTCAGCTCGGCAACTGCCCTACCGCCATTGAAACTCCCGCTTTACTTCTCTCTACTCGCAAAGGACTGCCTAATTTCATCTCTCCTGATCTTCTTCCCTCTCTCCCTTCCCCTGATTCTCACCTCCTCCAATTCAGTCCTCTTCACTTGTAAGTATTCAACACTATCCATATTCCTTCACCTCCATTCGCGTTCATTCTGTTTCTTAATTGGACCGCCTCCCTCTACTTTGTTTTGTTGCATGGATTTTCTTTTCATTTATTCGCTCTCGTATTTCTTAAGATTGTTCGCGGACGATTCCAGGACTAGAAACTATTCTAGAATTATGAGAATACGACAGGCTAAAGCATGAGATAAGAAGTTCGTACTTAGTAATATGTCATGGTGGTTGCTGCTGATACTACTATGTGCAGGAAAGGAGCGTGTGATCATGGAAGTTGAAATGATAACTATGTCGTCGTGATTCTTAAATAACTAAACGGCTAATTTACGTTGTTGCGACTTGTGCTCTAGACTCTTCCGAGATAGTTTATCTATGGTTTTTTTTTTAATAATCCTTTGTATGCATGAAACGGCAGTCAAGTAATTTATGGAATCCATTACTTTTTTCTGTCATTGGTCCTTGATTCAACATAATTTTTTTACTCTATATGACTTGCGTAATGAAAATTTGGTTCTCTTTACAATTATAAATTGAGTCCAATTTTTGTGCTGGTAGTTGGTACATAAATTGATTCTGAACGTTGTTTCTCGACGTTGGTGGCTGTTTTTCTTTAAACACTTGTGCTTCTGTTACATCTGTCTTGTTTCAGTTAATATTTTCAAGATTCATTCCATCTTGTATAAAAAAATCGGCTGTCCTTCACTGTGTTGTCGAGAAAGAAGTTATATTCATTCCATCGTAATGTTGAAGTTATAATATGAAGATTGTTTTTCTTATCTGATATTGGTTTGTTTTGTTGTTAGTCACATTGACTATTTGATCATTTAAATATTAGCTTGGAAGGTCCTTCATCGAAAACAGTATCAAGTATAGGAGGGCTCCAGCATTTACTTGGTTTACATGAATATGGATTTGCAGCAGTACCAAGGGATTCTGTTCAATGCCTTCCAGAATGTGATGCTACAAATAAATTTGGAGCATCTTTTGAGACTACTTCCGGTCGTCGTTTGGTAATGGAACCCCATTACTCTTTTTCATATCAACTCTTGCTATCCCTTCCTTTATTATTATAAATTCCTTTTGTAATTGTAGATTAGACCTGTTGAGTACATTGAAATGATTTCGTCCATGAAACCAGACATTTGGGCATCCTTGGCTGATGAAGTGCCATCGTGGGTTTCAGATAAAAGGAATAAAACATCAGTGGATCGAACTGTGAAATGGCTGGATGAATGCATAACTTTGAACTCAGTAAGAATGATAGAATATTCCTTTTTTAATATTAGTTGTATCAACATCTTGTCTGGTTTTAAACTCTGCTAGATCTAGATGTCTAATGTTGAGAAATGTCAGCCAATGGGCATCATTTATAAGCATTTGAATAAGCAGTACATAATTGCTCTTTCGTAGTATTCTGTGTTTTAAACATCAACACATGGTTAGGCCCATAGATAGAAAATAAGTTGGGAAAAATAGCAGATTATAAATTGTACTGGGGACTAAAATCTGCCTCTATGTTAGGTCTGTGGAGATCATCTGCGTGTGCAATTCTATATGGAAATTTATAGCGTAATAATGATTAGATAGAGGAAACATCATGGAGGAGCATAGAATGTTGGCCAAAATTTCCAAAGCAAGCTGCTTAAAGGAGGGAAACAAGAATTCTGGCCCCTTTTAAATTGATAGAAATGACATAATTATATCCGATGATGATAGGTGACCATCAGAGATTTTCCAAAATCTGGAGTGATTGGTTGGATAGGCTTTTATTTATATTTTTTAGGAGTAGATTCTCAAATGTGAAAGGGTTAGGGTGCCTAAAGTCTCACTGGATGATATAGCCTATGGGTGAAGTTTTGAGAAAAGGATGGAGCATCTTGAAAAACCTGATTCAATTGTGGTTTCCCATAGTATTTCAGAAGTGGTTGTTAACAAATGCACAGATGAAATCTACATTTTCCTTATCCCGATGGCTTCTAATTCGAGAAGATTCATTCATTCATTTATTTATTTTTATTTTTTTTGTGAGTCATATATAACCGTTGTGTTTAAATTTTAAAACTCATCGATGCAAAGGCAATATGGGAACGTTTTATTTTTTTTGCGAGTCATATGACCGTTGTGTTTAAAACTCATCAATGTAAAGGCAATATGGGAACATTTTATTTTTTTGCGAGTCATATGACCGTTGTGTTTAAAACTCATCAATGCAAAGGCAATATCAATATGGGAACGCTGTCATGACTCATGATAGTATTTGGTTTTTATGTCTAGTTTTGGTCCTTTTTATATTTTTCTTTTCCTAATCATGTCATGAGTGATTTGGAACAAGCAACTTATTATTATAATGAAGACAGGTGGGGGTGTTTTTGGAGCTATTGTTGGAGGCAATGATATAGAAGAACGCCAAAGATGTGCTGTGGAGGTGGTTAAGCGTAATGTATCAGGTTCAATTACATGTTTTTTCATATTTAAGGTGAAATAATGGTAATAAGTTCAAGAATCCATAGTTGGAAAACTAGTTTTTGAGTAATATCAATTTCTAGCTTCTAGCAGAATTTCTCTAGACTGCCAAAGTCCTTAATAGTCAGTTTGTAACATGTTTCTTAACACACATTCAAATTATTAGCATAACCAATAAAATTTTGAACAGAATATCAAGATTGACGTTCCTCATGTTTTCTTTTCATAACACCCTTGACCCTATCTAATATGTAAGGAATGATTGTTTTCCCTATGTATTTTGTTCAATTAAATTTCTCATTTCTATCTTAGCTTTTAGCTTGTTCTAATTTCTCAGTTTGAACAAACAATTTTTGTTAGGTTACTGGATTGGAGGTTTTGGGTCTGGAGAGAGCATGGATGAGCGTCCTGCTCTTCTTGATGCTGTTACGGTAAGGATTTGGCTTCCAGTGTTGTTTGGTTTGTTTTTTGAAGCATTGCCATCCTTTTCTTGCACCAAGAATGTGGATGTTTTGCATGTGTACTAGTTTATGAATTGAACTTTGAAGCTTAATAGTAGCAAGTTAGATTTGTTTGTGTTGTCTTCTCTGTTATCAATTTGTTGGAGCTTGGTCTTGTTTTTTGAGGTTTTTTTCTATTCTCTTGACGTTCATAGTCCTTGATGATTTATTCCATACAAAAACAAAAAGGCAACTGCACTGCGATCTACTCTTTACTTCCAATATCTTTGCTTATTCTCTGTGTCATTTTCCGTCCGTTTCCGTATCTTTTTTTTTTTTTTGTCTTTATTTTCTGTGTTCTAAGTAGCTCTATCCAAAGCTGTGTTGCCTGGTCTCCACCTTTATTTTACATTTTTCTCCCATTGAGTTTTTCTTAGCAAAGTATAATAAACCATATCGAACTTTTTTGTTTTGAAAATGAAACGTACTTCTAATAATTCTTTCATTGCTTTCACAGGATGTTTTACCAGAAGAAATGCCACGTATGATCTGTGGGCTTGGACTTCCAGGTATAGTTTTTTCAATCTTTTAGGTTGAGTTGCTTGACGAATACATCTTGTTTTGACTTTTGGTTGGATTCTGTGTCCAGCCTATGGAAGCTCAAACTACATATCTTTAATATTTTAATGAAACCTAGACGTTTAAAGGGATGTTGGTTTATGGTTTTAGTAGGCCTAAATTTTTGTAGCTGACTAAGAAGTTTAGGTTTAATCATTTCTGTCACTCTTAATGCACACTTTGTAATTGTAGTTTGAATTCTCAGTTCTCTGGCTACCAGGAAGAGCACGTTTGTCAAAACAATTAAATATCATTGCTGTTGATATATGTAAATATATAGTGTTAACTTTTAAGGTTTCAAAAATGTGTAGTTTGAGTTTCTATAGTCATTGTTACCATAAATATCATTATTGTAAAATACACATCAATTGTAAGCTCGACATCAGAATCAGAGACTATATGACTCAATCTGTGAGGCAACAACCCTGATAAAATGTTGGATGGTCTCTGACCAATTATAGGGTTAACTGGTCAAATAAACTTGGTGTGTCCGCATCCTGTGATGAATCCAAGGTTTCCATTTTACCTTAGGTTCTTGCATCAAACTAAATTTATTTATGGATCTTGCAGAGGAGATCTTGCAGGGCATTGCAGCGGGAGTCGATCTCTTTGACTCTGCGTATGTTACTCATTTTGAATTAGTTTGTTTTTCTATGATTGTATCTCCATAAATAGTTCCATTACCGTATTGCAGTTACGTATATCATTTAACCCTTGGAGGCTTTGCTCTCACCTTCCCACTTAATGGAATTGTGGAGAAACAGCCTGCCGCACACCTGAAAGATAATGCAAGTGATATGACAAAGATCAACTTAAGAGCAACACTTTATCGGTAAGTTTCAAATACTTCAGATCTCTATTATTGCTTGAGTATTGATTTGCCAATATTTAGTCCCTTTATTTTCTAGACCCTAATTTTCATTCTGTATGTATTTGCCAAAAATGGTTTATTTCTTTTGTCAGGAAAGACACATCACCAATTCTTGAGGGGTGTAATTGCTATACTTGTCTGAATCATACGAAGGCTTATATAAATCACTTACTAAATGTCCATGAAATGCTGGCTCAGATACTGCTGGAGTTGTATGAACATTTCACTACTTGAATTGTATATTTGGTCGTCTCAATTTTTATTCTCACAGTAATTATTCTCACTACATTGCAGACATAATACGCACCACTATTTAGGATTCTTTCGTTCAATCCGAGAAGCAATCAAGGCAGGCAAATTTCAGCAATTTCATCAGAAATTTGTTGAGGTGAGGCGCAATCATCTAGCCTTGCCAACACCAGCACTCAGCTGTTGA

mRNA sequence

ATGAAATTCGGTGTGAAGGCATGGAGCAACGGCAAGGCGCGCACCGGATTTCTTCAGCTCGGCAACTGCCCTACCGCCATTGAAACTCCCGCTTTACTTCTCTCTACTCGCAAAGGACTGCCTAATTTCATCTCTCCTGATCTTCTTCCCTCTCTCCCTTCCCCTGATTCTCACCTCCTCCAATTCAGTCCTCTTCACTTCTTGGAAGGTCCTTCATCGAAAACAGTATCAAGTATAGGAGGGCTCCAGCATTTACTTGGTTTACATGAATATGGATTTGCAGCAGTACCAAGGGATTCTGTTCAATGCCTTCCAGAATGTGATGCTACAAATAAATTTGGAGCATCTTTTGAGACTACTTCCGGTCGTCGTTTGATTAGACCTGTTGAGTACATTGAAATGATTTCGTCCATGAAACCAGACATTTGGGCATCCTTGGCTGATGAAGTGCCATCGTGGGTTTCAGATAAAAGGAATAAAACATCAGTGGATCGAACTGTGAAATGGCTGGATGAATGCATAACTTTGAACTCAACAGGTGGGGGTGTTTTTGGAGCTATTGTTGGAGGCAATGATATAGAAGAACGCCAAAGATGTGCTGTGGAGGTGGTTAAGCGTAATGTATCAGGTTACTGGATTGGAGGTTTTGGGTCTGGAGAGAGCATGGATGAGCGTCCTGCTCTTCTTGATGCTGTTACGGATGTTTTACCAGAAGAAATGCCACGTATGATCTGTGGGCTTGGACTTCCAGAGGAGATCTTGCAGGGCATTGCAGCGGGAGTCGATCTCTTTGACTCTGCTTACGTATATCATTTAACCCTTGGAGGCTTTGCTCTCACCTTCCCACTTAATGGAATTGTGGAGAAACAGCCTGCCGCACACCTGAAAGATAATGCAAGTGATATGACAAAGATCAACTTAAGAGCAACACTTTATCGACATAATACGCACCACTATTTAGGATTCTTTCGTTCAATCCGAGAAGCAATCAAGGCAGGCAAATTTCAGCAATTTCATCAGAAATTTGTTGAGGTGAGGCGCAATCATCTAGCCTTGCCAACACCAGCACTCAGCTGTTGA

Coding sequence (CDS)

ATGAAATTCGGTGTGAAGGCATGGAGCAACGGCAAGGCGCGCACCGGATTTCTTCAGCTCGGCAACTGCCCTACCGCCATTGAAACTCCCGCTTTACTTCTCTCTACTCGCAAAGGACTGCCTAATTTCATCTCTCCTGATCTTCTTCCCTCTCTCCCTTCCCCTGATTCTCACCTCCTCCAATTCAGTCCTCTTCACTTCTTGGAAGGTCCTTCATCGAAAACAGTATCAAGTATAGGAGGGCTCCAGCATTTACTTGGTTTACATGAATATGGATTTGCAGCAGTACCAAGGGATTCTGTTCAATGCCTTCCAGAATGTGATGCTACAAATAAATTTGGAGCATCTTTTGAGACTACTTCCGGTCGTCGTTTGATTAGACCTGTTGAGTACATTGAAATGATTTCGTCCATGAAACCAGACATTTGGGCATCCTTGGCTGATGAAGTGCCATCGTGGGTTTCAGATAAAAGGAATAAAACATCAGTGGATCGAACTGTGAAATGGCTGGATGAATGCATAACTTTGAACTCAACAGGTGGGGGTGTTTTTGGAGCTATTGTTGGAGGCAATGATATAGAAGAACGCCAAAGATGTGCTGTGGAGGTGGTTAAGCGTAATGTATCAGGTTACTGGATTGGAGGTTTTGGGTCTGGAGAGAGCATGGATGAGCGTCCTGCTCTTCTTGATGCTGTTACGGATGTTTTACCAGAAGAAATGCCACGTATGATCTGTGGGCTTGGACTTCCAGAGGAGATCTTGCAGGGCATTGCAGCGGGAGTCGATCTCTTTGACTCTGCTTACGTATATCATTTAACCCTTGGAGGCTTTGCTCTCACCTTCCCACTTAATGGAATTGTGGAGAAACAGCCTGCCGCACACCTGAAAGATAATGCAAGTGATATGACAAAGATCAACTTAAGAGCAACACTTTATCGACATAATACGCACCACTATTTAGGATTCTTTCGTTCAATCCGAGAAGCAATCAAGGCAGGCAAATTTCAGCAATTTCATCAGAAATTTGTTGAGGTGAGGCGCAATCATCTAGCCTTGCCAACACCAGCACTCAGCTGTTGA

Protein sequence

MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLLQFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETTSGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTGGGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEMPRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNASDMTKINLRATLYRHNTHHYLGFFRSIREAIKAGKFQQFHQKFVEVRRNHLALPTPALSC

Homology

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BLAST of HG10005887 vs. NCBI nr
Match: XP_038885042.1 (queuine tRNA-ribosyltransferase accessory subunit 2-like [Benincasa hispida])

HSP 1 Score: 689.9 bits (1779), Expect = 1.2e-194
Identity = 343/399 (85.96%), Postives = 347/399 (86.97%), Query Frame = 0


Query: 1   MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 60
           MKF VKAWSNGKARTGFLQLGNCP AIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL
Sbjct: 1   MKFAVKAWSNGKARTGFLQLGNCPNAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 60

Query: 61  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 120
           QFSPLHFLEGPSSKT+S IGGLQHLLGLHEYGF AV RDSVQCLPECDATNKFGASFETT
Sbjct: 61  QFSPLHFLEGPSSKTISRIGGLQHLLGLHEYGFVAVARDSVQCLPECDATNKFGASFETT 120

Query: 121 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180
            GRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG
Sbjct: 121 CGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180

Query: 181 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 240
           G VFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESM+ERPALLDAVTDVLPEEM
Sbjct: 181 GAVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMEERPALLDAVTDVLPEEM 240

Query: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 300
           PRMICGLGLPEEILQGIA GVDLFDSAY+YHLTLGGFALTFPLNGIVEKQPAAHLKD A 
Sbjct: 241 PRMICGLGLPEEILQGIATGVDLFDSAYIYHLTLGGFALTFPLNGIVEKQPAAHLKDKAC 300

Query: 301 DMTKINLRATLYR----------------------------------------HNTHHYL 360
           DMTKINLRATLYR                                        HNTHHYL
Sbjct: 301 DMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELHNTHHYL 360

[Close]

BLAST of HG10005887 vs. NCBI nr
Match: XP_008441158.1 (PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like [Cucumis melo])

HSP 1 Score: 679.1 bits (1751), Expect = 2.1e-191
Identity = 336/399 (84.21%), Postives = 345/399 (86.47%), Query Frame = 0


Query: 1   MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 60
           MKF VKAWSNGKARTGFLQLGNCP AI+TPALLLST KGLPNFISPDLLPSLPSPDSH+L
Sbjct: 1   MKFAVKAWSNGKARTGFLQLGNCPAAIDTPALLLSTSKGLPNFISPDLLPSLPSPDSHIL 60

Query: 61  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 120
           QFSPLHFLEGPSSKT+SSIGGLQHLLGLHEYGFAAV RDSVQCLP+CDATNKFGASFETT
Sbjct: 61  QFSPLHFLEGPSSKTISSIGGLQHLLGLHEYGFAAVARDSVQCLPQCDATNKFGASFETT 120

Query: 121 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180
            GRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG
Sbjct: 121 CGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180

Query: 181 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 240
           G VFGAIVGGND+EERQRCAVEVVKRNVSGYWIGGFG GESMDERP+LLDAVTDVLPEEM
Sbjct: 181 GAVFGAIVGGNDLEERQRCAVEVVKRNVSGYWIGGFGFGESMDERPSLLDAVTDVLPEEM 240

Query: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 300
           PRMICGLGLPEEILQGIAAGVDLFDSAY+YHLTLGGFALTFPL+GIVEKQPAAHL DNA 
Sbjct: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYIYHLTLGGFALTFPLDGIVEKQPAAHLIDNAI 300

Query: 301 DMTKINLRATLYR----------------------------------------HNTHHYL 360
           DMTKINLRAT+YR                                        HNTHHYL
Sbjct: 301 DMTKINLRATIYRKDTSPILEGCTCYTCLNHTKAYINHLLNVHEMLAQILLEIHNTHHYL 360

[Close]

BLAST of HG10005887 vs. NCBI nr
Match: XP_004138668.1 (queuine tRNA-ribosyltransferase accessory subunit 2 [Cucumis sativus] >KGN63275.2 hypothetical protein Csa_022389 [Cucumis sativus])

HSP 1 Score: 664.8 bits (1714), Expect = 4.1e-187
Identity = 330/398 (82.91%), Postives = 343/398 (86.18%), Query Frame = 0


Query: 1   MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 60
           MKF VKAWSNGKARTGFLQLGNCP AI+TPALLLSTRKGLP+FISPDLLPSLPSPDSHLL
Sbjct: 1   MKFAVKAWSNGKARTGFLQLGNCPAAIDTPALLLSTRKGLPHFISPDLLPSLPSPDSHLL 60

Query: 61  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 120
           QFSPLHFLEGPSSKT+S+IGGLQHLLGLHEYGFAAV RDSVQ LPECDATNKFGASFETT
Sbjct: 61  QFSPLHFLEGPSSKTISNIGGLQHLLGLHEYGFAAVARDSVQSLPECDATNKFGASFETT 120

Query: 121 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180
            GRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECI LNSTG
Sbjct: 121 CGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECIALNSTG 180

Query: 181 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 240
           G VFGAIVGGND+EERQRCAVEVVKRNVSGYWIGGFG GESMDERP+LLDAVTDVLPEEM
Sbjct: 181 GAVFGAIVGGNDLEERQRCAVEVVKRNVSGYWIGGFGFGESMDERPSLLDAVTDVLPEEM 240

Query: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 300
           PRMICGLGLPEE+LQGIAAGVDLFDSAY+YHLTLGGFALTFPL+GIVEKQP AHL DNAS
Sbjct: 241 PRMICGLGLPEEVLQGIAAGVDLFDSAYIYHLTLGGFALTFPLDGIVEKQPDAHLIDNAS 300

Query: 301 DMTKINLRATLYR----------------------------------------HNTHHYL 359
           DMTKINLRA ++R                                        HNT+HYL
Sbjct: 301 DMTKINLRAIVFRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLEIHNTYHYL 360

[Close]

BLAST of HG10005887 vs. NCBI nr
Match: XP_022152510.1 (queuine tRNA-ribosyltransferase accessory subunit 2-like [Momordica charantia])

HSP 1 Score: 659.4 bits (1700), Expect = 1.7e-185
Identity = 326/398 (81.91%), Postives = 338/398 (84.92%), Query Frame = 0


Query: 1   MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 60
           MKF VKAWSNGKARTG LQLGNCPTAIETPALLLSTRKGL NFISPDLLPSLPSPDSHLL
Sbjct: 1   MKFAVKAWSNGKARTGVLQLGNCPTAIETPALLLSTRKGLLNFISPDLLPSLPSPDSHLL 60

Query: 61  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 120
           QFSPLHFLEGPSSKT+SSIGGLQHLLGLHEYGFAAV RDSV CLPECDA NKFGASFETT
Sbjct: 61  QFSPLHFLEGPSSKTISSIGGLQHLLGLHEYGFAAVARDSVWCLPECDAANKFGASFETT 120

Query: 121 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180
            GRRLIRPVEYIEMISS++PDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECIT NSTG
Sbjct: 121 CGRRLIRPVEYIEMISSLRPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITSNSTG 180

Query: 181 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 240
           G VFGAIVGGND+EERQRCA EV+KRNVSGYWIGGFG GESMDERPALLDAVT +LPEEM
Sbjct: 181 GAVFGAIVGGNDVEERQRCAAEVIKRNVSGYWIGGFGLGESMDERPALLDAVTGILPEEM 240

Query: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 300
           PRMICGLGLPEEILQGIAAGVDLFDSAY+YHLT+GGFALTFPLNGIVEK P  HL DN S
Sbjct: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGS 300

Query: 301 DMTKINLRATLYR----------------------------------------HNTHHYL 359
           D+TKINLRATLYR                                        HNTHHYL
Sbjct: 301 DLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQILLEIHNTHHYL 360

[Close]

BLAST of HG10005887 vs. NCBI nr
Match: KAG6602735.1 (Queuine tRNA-ribosyltransferase accessory subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 648.3 bits (1671), Expect = 3.9e-182
Identity = 320/398 (80.40%), Postives = 339/398 (85.18%), Query Frame = 0


Query: 1   MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 60
           MKF VKAWSN KARTG LQLGNCPTAI+TPALLLST KGLPNFISPDLLPSLPSPDSHLL
Sbjct: 1   MKFAVKAWSNCKARTGCLQLGNCPTAIDTPALLLSTCKGLPNFISPDLLPSLPSPDSHLL 60

Query: 61  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 120
           QFSPLHFLEGPS KT+SSIGGLQHLLGLHEY FAAV RDSVQCLPEC+A+NKFGASFETT
Sbjct: 61  QFSPLHFLEGPSLKTISSIGGLQHLLGLHEYVFAAVARDSVQCLPECNASNKFGASFETT 120

Query: 121 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180
            GRRLIRPVEY+E+ISSM+PDIWASLADEVPSWVSDKRNKTSVDRTV+WLDECI LNSTG
Sbjct: 121 CGRRLIRPVEYVELISSMRPDIWASLADEVPSWVSDKRNKTSVDRTVRWLDECIKLNSTG 180

Query: 181 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 240
           G +FGAIVGGND+EERQRCA+EVVKRNVSGYWIGGFG GES+DERPALLDAVTDVLPEE+
Sbjct: 181 GAIFGAIVGGNDMEERQRCALEVVKRNVSGYWIGGFGLGESIDERPALLDAVTDVLPEEL 240

Query: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 300
           PRMICGLGLPEEILQGIAAGVDLFDSAY+YHLTLGGFALTFPLNGI EK+P  HL D+AS
Sbjct: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYIYHLTLGGFALTFPLNGIAEKRPDTHLNDDAS 300

Query: 301 DMTKINLRATLYR----------------------------------------HNTHHYL 359
           D TKINLRATLYR                                        HNTHHYL
Sbjct: 301 DRTKINLRATLYRKDTSPILEGCNCYACLNHTKAYINHLLNVHEMLAQILLEIHNTHHYL 360

[Close]

BLAST of HG10005887 vs. ExPASy Swiss-Prot
Match: Q28DX0 (Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Xenopus tropicalis OX=8364 GN=qtrt2 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-29
Identity = 106/325 (32.62%), Postives = 157/325 (48.31%), Query Frame = 0


Query: 1   MKFGVKAWSNGKARTGFL-QLG-NCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSH 60
           MK  +   +NG AR G +  +G N    +E P  LL T+ G P  ++ D L ++      
Sbjct: 1   MKLSISKVANG-ARLGVISNIGRNGDKTLEVPGCLLYTKTGSPPHLTHDTLQTIEG---- 60

Query: 61  LLQFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYG---FAAVP--------RDSVQCLPEC 120
                    +   +  T+S++   Q +L  ++ G   FA +P         D V   P  
Sbjct: 61  ---------VPAVTHITLSTLAEHQEVLEEYKEGIGKFAGMPDAVLYCSTHDPVSPCPTG 120

Query: 121 DATNKFGASFETTSGRRLIRPVEYIEMISSMKPDIWASLAD--EVPSWVSDKRNKTSVDR 180
             TNK   S     GR  +   ++I     ++PD +  L+D    P   S KR K SVDR
Sbjct: 121 YNTNK-AVSLWGAGGRIEMTAQKFISAQRVLRPDWFQCLSDGEVTPGGNSRKRVKKSVDR 180

Query: 181 TVKWLDECITLNSTGGG-----VFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGE 240
           T+ +LDEC+ L S         + GA+ GG+ +EER R A E  KR V G+ + GF  G 
Sbjct: 181 TLAFLDECLQLLSGHEDLKPCVLIGAVEGGDLLEERLRSARETAKRPVGGFLLDGFHGG- 240

Query: 241 SMDERPALLDAVTDVLPEEMPRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALT 299
           S ++  +L+ AVT  LPE+ PR I G+G P+E+L+ +  GVDLFDS + Y +T  G AL 
Sbjct: 241 SAEKELSLISAVTAALPEDKPRFIHGMGRPDEVLECVQRGVDLFDSCFPYRVTERGCALI 300

[Close]

BLAST of HG10005887 vs. ExPASy Swiss-Prot
Match: Q7ZVJ6 (Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Danio rerio OX=7955 GN=qtrt2 PE=2 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 6.2e-29
Identity = 95/337 (28.19%), Postives = 150/337 (44.51%), Query Frame = 0


Query: 81  GLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETTSGRRLIRPVEYIEMISSMKP 140
           G++   GLH+        DS    P    TNK   S   + GR  +    ++ + ++++P
Sbjct: 80  GVRKFAGLHDTVIFCSLHDSASPSPAGHVTNK-TVSVWGSGGRIELTAARFMSIQAAVQP 139

Query: 141 DIWASLADEVPSW---VSDKRNKTSVDRTVKWLDECITLNS-----TGGGVFGAIVGGND 200
           D + S+AD   +W    S KR + +VDRT+  LDEC+ L+          +FG + GG+ 
Sbjct: 140 DCYQSMADG-ETWQANTSRKRVRKAVDRTLAHLDECLVLHQKTQELKHAEIFGVVEGGDI 199

Query: 201 IEERQRCAVEVVKRNVSGYWIGGF-GSGESMDERPALLDAVTDVLPEEMPRMICGLGLPE 260
           +EER R A E  KR V G+ + GF  S    D R  L+   +  LP+E PR++ G+G P+
Sbjct: 200 LEERLRSARETAKRPVGGFVLDGFHSSAMDQDVRAQLIQETSAELPQEKPRLVLGVGRPD 259

Query: 261 EILQGIAAGVDLFDSAYVYHLTLGGFALTF-------------------PLNGIVEKQPA 320
           E++  + AGVDLF+S + + +T  G AL+F                     NG   +   
Sbjct: 260 EVISCVEAGVDLFESFFPFQVTERGCALSFNYTIDPDPETAGTSASTVLECNGETPEVKK 319

Query: 321 AHLKDNASDMT--KINLRATLYR------------------------------------- 348
               ++  +MT  +INL+   YR                                     
Sbjct: 320 PSANEDVENMTPFEINLKDKRYRDDFRPLVEGCVCYCCQKHMRAYVHHLLVTNELLAGVL 379

[Close]

BLAST of HG10005887 vs. ExPASy Swiss-Prot
Match: Q5ZM96 (Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Gallus gallus OX=9031 GN=QTRT2 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.5e-27
Identity = 92/292 (31.51%), Postives = 148/292 (50.68%), Query Frame = 0


Query: 26  AIETPALLLSTRKGLPNFISPDLLPSL----PSPDSHLLQFSPLHFLEGPSSKTVSSIGG 85
           A+  P  LL TR G    ++ D L  +    P     L   + LH +     +      G
Sbjct: 26  ALALPGCLLYTRTGTAPHLTLDTLREVSGVPPVAQLTLPAMAELHDVLAEYKE------G 85

Query: 86  LQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETTSGRRLIRPVEYIEMISSMKPD 145
               +G+ +       +D V   P    TNK   S  ++SGR  +   +++++  +++PD
Sbjct: 86  AAKFIGMPDTVLYCSLQDPVAPCPSGYNTNK-TVSLWSSSGRMEMTASKFMDIQRAIQPD 145

Query: 146 IWASLA--DEVPSWVSDKRNKTSVDRTVKWLDECITL-----NSTGGGVFGAIVGGNDIE 205
            +  +A  D +   V+ KR K SVDR++ +LD C+ L        G  +FG I GG+ +E
Sbjct: 146 WFQCIADGDTISGEVTRKRAKKSVDRSLSFLDACLQLLEKTPELQGSVMFGTIEGGDVLE 205

Query: 206 ERQRCAVEVVKRNVSGYWIGGF-GSGESMDERPALLDAVTDVLPEEMPRMICGLGLPEEI 265
           ER R A E  KR V G+ + GF G   + + +  L+ +VT  LPE+ PR+I G+G P+E+
Sbjct: 206 ERLRSARETAKRPVGGFLLDGFQGRAMAKETKMNLISSVTAELPEDKPRIIHGVGKPDEV 265

Query: 266 LQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDN-ASDMTK 305
           L+ I  GVD+F+S + + +T  G AL F  + + + +  A LK N A D+ K
Sbjct: 266 LECIERGVDIFESFFPFQVTERGCALVFGYDYLSDPKAEAALKQNGAQDLEK 310

[Close]

BLAST of HG10005887 vs. ExPASy Swiss-Prot
Match: Q9VPY8 (Queuine tRNA-ribosyltransferase catalytic subunit OS=Drosophila melanogaster OX=7227 GN=Tgt PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.4e-27
Identity = 104/378 (27.51%), Postives = 171/378 (45.24%), Query Frame = 0


Query: 9   SNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLLQFSPLHFL 68
           S  KAR G + L +  + + TP  +    +G    I PD L  L   +  +L  +  H  
Sbjct: 18  SVSKARAGLMTLRH--SEVNTPVFMPVGTQGTLKGIVPDQLIEL---NCQILLGNTYHLG 77

Query: 69  EGPSSKTVSSIGGLQHLLG------LHEYGFAAVPRDSVQCLPECDATNKFGASFET--T 128
             P  +T+   GGL   +G          GF  V   S+  L E D   + G +F +   
Sbjct: 78  LRPGIETLKKAGGLHKFMGWPRAILTDSGGFQMV---SLLQLAEID---EHGVNFRSPFD 137

Query: 129 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 188
           + + ++ P   IE+ +++  DI   L D V +  +  R + +++RT++W+D CI  ++  
Sbjct: 138 NSQCMLTPEHSIEIQNAIGGDIMMQLDDVVKTTTTGPRVEEAMERTIRWVDRCIEAHARD 197

Query: 189 G--GVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPE 248
               +F  + GG D+  RQRC   +++R V G+ +GG   GES  +   ++D  T  LP+
Sbjct: 198 DDQSLFPIVQGGLDVPLRQRCVSALMERQVRGFAVGGLSGGESKHDFWRMVDVCTGYLPK 257

Query: 249 EMPRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHL--- 308
           + PR + G+G   +++  +A G+D+FD  +       G AL      +  KQP   L   
Sbjct: 258 DKPRYLMGVGFAADLVVCVALGIDMFDCVFPTRTARFGCALV-DSGQLNLKQPKYKLDME 317

Query: 309 ---KDNASDMTKINLRATLYR--------------HNTHHYLGFFRSIREAIKAGKFQQF 357
              KD      +   R+ L+               HN  + L   RS+REAI+  +F QF
Sbjct: 318 PIDKDCDCSTCRRYTRSYLHHIATNESVSSSLLSIHNVAYQLRLMRSMREAIQRDEFPQF 377

[Close]

BLAST of HG10005887 vs. ExPASy Swiss-Prot
Match: B8ZXI1 (Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Mus musculus OX=10090 GN=Qtrt2 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 1.7e-26
Identity = 115/401 (28.68%), Postives = 170/401 (42.39%), Query Frame = 0


Query: 21  GNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLLQFSPLHFLEGPSSKTVSSIG 80
           G+C   ++ P  LL TR G    ++   L +             +H + G +  T+SS+ 
Sbjct: 24  GDC--TVDIPGCLLYTRTGSAPHLTHQTLRN-------------IHGVPGIAQLTLSSLA 83

Query: 81  -----------GLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETTSGRRLIRPV 140
                      G+   +G+ E  F     D V   P    T+K   S     GR  +   
Sbjct: 84  EHHEVLAEYKKGVGSFIGMPESLFYCSLHDPVTPGPAGYVTSK-SVSVWGFGGRVEMTVS 143

Query: 141 EYIEMISSMKPDIWASLADEVPS---WVSDKRNKTSVDRTVKWLDECITLNSTG-----G 200
           +++ +  +++PD +  L+D   S     S KR + SVDR++ +LD C+ L          
Sbjct: 144 KFMAIQEALQPDWFQCLSDGEASCAETTSIKRARKSVDRSLLFLDSCLRLQEESEVLQKS 203

Query: 201 GVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDE-RPALLDAVTDVLPEEM 260
            + G I GG+ +EER R A E  KR V G+ + GF    ++ E R  LL +VT  LPE+ 
Sbjct: 204 VIIGVIEGGDVMEERLRSARETAKRPVGGFLLDGFQGDPAVTETRLHLLSSVTAELPEDK 263

Query: 261 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPL-------------NGIV 320
           PR+ICG+  P+E+L+ I  GVDLF+S + Y +T  G ALTF               NGI 
Sbjct: 264 PRLICGVSRPDEVLECIERGVDLFESFFPYQVTERGCALTFTFDCQLNPEETLLQQNGIQ 323

Query: 321 EK----QPAAHLKDNA--SDMT--KINLRATLYR-------------------------- 341
           EK      A  ++      +MT  +INL+   Y+                          
Sbjct: 324 EKIKGLDQAKKIEATGCNQEMTSFEINLKEKKYQEDFDPLVRGCSCYCCKNHTRAYIHHL 383

[Close]

BLAST of HG10005887 vs. ExPASy TrEMBL
Match: A0A1S3B3I7 (Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Cucumis melo OX=3656 GN=LOC103485379 PE=3 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.0e-191
Identity = 336/399 (84.21%), Postives = 345/399 (86.47%), Query Frame = 0


Query: 1   MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 60
           MKF VKAWSNGKARTGFLQLGNCP AI+TPALLLST KGLPNFISPDLLPSLPSPDSH+L
Sbjct: 1   MKFAVKAWSNGKARTGFLQLGNCPAAIDTPALLLSTSKGLPNFISPDLLPSLPSPDSHIL 60

Query: 61  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 120
           QFSPLHFLEGPSSKT+SSIGGLQHLLGLHEYGFAAV RDSVQCLP+CDATNKFGASFETT
Sbjct: 61  QFSPLHFLEGPSSKTISSIGGLQHLLGLHEYGFAAVARDSVQCLPQCDATNKFGASFETT 120

Query: 121 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180
            GRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG
Sbjct: 121 CGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180

Query: 181 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 240
           G VFGAIVGGND+EERQRCAVEVVKRNVSGYWIGGFG GESMDERP+LLDAVTDVLPEEM
Sbjct: 181 GAVFGAIVGGNDLEERQRCAVEVVKRNVSGYWIGGFGFGESMDERPSLLDAVTDVLPEEM 240

Query: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 300
           PRMICGLGLPEEILQGIAAGVDLFDSAY+YHLTLGGFALTFPL+GIVEKQPAAHL DNA 
Sbjct: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYIYHLTLGGFALTFPLDGIVEKQPAAHLIDNAI 300

Query: 301 DMTKINLRATLYR----------------------------------------HNTHHYL 360
           DMTKINLRAT+YR                                        HNTHHYL
Sbjct: 301 DMTKINLRATIYRKDTSPILEGCTCYTCLNHTKAYINHLLNVHEMLAQILLEIHNTHHYL 360

[Close]

BLAST of HG10005887 vs. ExPASy TrEMBL
Match: A0A6J1DE50 (Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Momordica charantia OX=3673 GN=LOC111020219 PE=3 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 8.3e-186
Identity = 326/398 (81.91%), Postives = 338/398 (84.92%), Query Frame = 0


Query: 1   MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 60
           MKF VKAWSNGKARTG LQLGNCPTAIETPALLLSTRKGL NFISPDLLPSLPSPDSHLL
Sbjct: 1   MKFAVKAWSNGKARTGVLQLGNCPTAIETPALLLSTRKGLLNFISPDLLPSLPSPDSHLL 60

Query: 61  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 120
           QFSPLHFLEGPSSKT+SSIGGLQHLLGLHEYGFAAV RDSV CLPECDA NKFGASFETT
Sbjct: 61  QFSPLHFLEGPSSKTISSIGGLQHLLGLHEYGFAAVARDSVWCLPECDAANKFGASFETT 120

Query: 121 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180
            GRRLIRPVEYIEMISS++PDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECIT NSTG
Sbjct: 121 CGRRLIRPVEYIEMISSLRPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITSNSTG 180

Query: 181 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 240
           G VFGAIVGGND+EERQRCA EV+KRNVSGYWIGGFG GESMDERPALLDAVT +LPEEM
Sbjct: 181 GAVFGAIVGGNDVEERQRCAAEVIKRNVSGYWIGGFGLGESMDERPALLDAVTGILPEEM 240

Query: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 300
           PRMICGLGLPEEILQGIAAGVDLFDSAY+YHLT+GGFALTFPLNGIVEK P  HL DN S
Sbjct: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYIYHLTIGGFALTFPLNGIVEKVPDLHLNDNGS 300

Query: 301 DMTKINLRATLYR----------------------------------------HNTHHYL 359
           D+TKINLRATLYR                                        HNTHHYL
Sbjct: 301 DLTKINLRATLYRKDTSPILEGCDCYTCLNHTKAYINHLLNVHEMLAQILLEIHNTHHYL 360

[Close]

BLAST of HG10005887 vs. ExPASy TrEMBL
Match: A0A6J1JNK0 (Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111487476 PE=3 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 3.3e-182
Identity = 319/398 (80.15%), Postives = 339/398 (85.18%), Query Frame = 0


Query: 1   MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 60
           MKF VKAWSN KARTG LQLGNCPTAI+TPALLLST KGLPNFISPDLLPSLPSPDSHLL
Sbjct: 1   MKFAVKAWSNCKARTGCLQLGNCPTAIDTPALLLSTCKGLPNFISPDLLPSLPSPDSHLL 60

Query: 61  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 120
           QFSPLHFLEGPS KT+SSIGGLQHLLGLHEY FAAV RDSVQCLPEC+A+NKFGASFETT
Sbjct: 61  QFSPLHFLEGPSLKTISSIGGLQHLLGLHEYVFAAVARDSVQCLPECNASNKFGASFETT 120

Query: 121 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180
            GRRLI+PVEY+E+ISSM+PDIWASLADEVPSWVSDKRNKTSVDRTV+WLDECI LNSTG
Sbjct: 121 CGRRLIKPVEYVELISSMRPDIWASLADEVPSWVSDKRNKTSVDRTVRWLDECINLNSTG 180

Query: 181 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 240
           G +FGAIVGGND+EERQRCA+EVVKRNVSGYWIGGFG GES+DERPALLDAVTDVLPEE+
Sbjct: 181 GAIFGAIVGGNDMEERQRCALEVVKRNVSGYWIGGFGLGESIDERPALLDAVTDVLPEEL 240

Query: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 300
           PRMICGLGLPEEILQGIAAGVDLFDSAY+YHLTLGGFALTFPLNGI EK+P  HL D+AS
Sbjct: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYIYHLTLGGFALTFPLNGIAEKRPDTHLNDDAS 300

Query: 301 DMTKINLRATLYR----------------------------------------HNTHHYL 359
           D TKINLRATLYR                                        HNTHHYL
Sbjct: 301 DRTKINLRATLYRKDTSPILEGCNCYACLNHTKAYINHLLNVHEMLAQILLEIHNTHHYL 360

[Close]

BLAST of HG10005887 vs. ExPASy TrEMBL
Match: A0A6J1HIG1 (Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111464336 PE=3 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.2e-181
Identity = 318/398 (79.90%), Postives = 338/398 (84.92%), Query Frame = 0


Query: 1   MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 60
           MKF VKAWSN KARTG +QLGNCPTAI+TPALLLST KGLPNFISPDLLPSLPSPDSHLL
Sbjct: 1   MKFAVKAWSNCKARTGCIQLGNCPTAIDTPALLLSTCKGLPNFISPDLLPSLPSPDSHLL 60

Query: 61  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 120
           QFSPLHFLEGPS K +SSIGGLQHLLGLHEY FAAV RDSVQCLPEC+A+NKFGASFETT
Sbjct: 61  QFSPLHFLEGPSLKAISSIGGLQHLLGLHEYVFAAVARDSVQCLPECNASNKFGASFETT 120

Query: 121 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180
            GRRLIRPVEY+E+ISSM+PDIWASLADEVPSWVSDKRNKTSVDRTV+WLDECI LNSTG
Sbjct: 121 CGRRLIRPVEYVELISSMRPDIWASLADEVPSWVSDKRNKTSVDRTVRWLDECIKLNSTG 180

Query: 181 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 240
           G +FGAIVGGND+EERQRCA+EVVKRNVSGYWIGGFG GES+DERPALLDAVTDVLPEE+
Sbjct: 181 GAIFGAIVGGNDMEERQRCALEVVKRNVSGYWIGGFGLGESIDERPALLDAVTDVLPEEL 240

Query: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 300
           PRMICGLGLPEEILQGIAAGVDLFDSAY+YHLTLGGFALTFPLNGI EK+P  HL D+AS
Sbjct: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYIYHLTLGGFALTFPLNGIAEKRPDTHLNDDAS 300

Query: 301 DMTKINLRATLYR----------------------------------------HNTHHYL 359
           D TKINLRATLYR                                        HNTHHYL
Sbjct: 301 DRTKINLRATLYRKDTSPILEGCNCYACLNHTKAYINHLLNVHEMLAQILLEIHNTHHYL 360

[Close]

BLAST of HG10005887 vs. ExPASy TrEMBL
Match: A0A5A7T128 (Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00430 PE=3 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 2.3e-172
Identity = 296/316 (93.67%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 1   MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 60
           MKF VKAWSNGKARTGFLQLGNCP AI+TPALLLST KGLPNFISPDLLPSLPSPDSH+L
Sbjct: 1   MKFAVKAWSNGKARTGFLQLGNCPAAIDTPALLLSTSKGLPNFISPDLLPSLPSPDSHIL 60

Query: 61  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 120
           QFSPLHFLEGPSSKT+SSIGGLQHLLGLHEYGFAAV RDSVQCLP+CDATNKFGASFETT
Sbjct: 61  QFSPLHFLEGPSSKTISSIGGLQHLLGLHEYGFAAVARDSVQCLPQCDATNKFGASFETT 120

Query: 121 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180
            GRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG
Sbjct: 121 CGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180

Query: 181 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 240
           G VFGAIVGGND+EERQRCAVEVVKRNVSGYWIGGFG GESMDERP+LLDAVTDVLPEEM
Sbjct: 181 GAVFGAIVGGNDLEERQRCAVEVVKRNVSGYWIGGFGFGESMDERPSLLDAVTDVLPEEM 240

Query: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 300
           PRMICGLGLPEEILQGIAAGVDLFDSAY+YHLTLGGFALTFPL+GIVEKQPAAHL DNA 
Sbjct: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYIYHLTLGGFALTFPLDGIVEKQPAAHLIDNAI 300

Query: 301 DMTKINLRATLYRHNT 317
           DMTKINLRAT+YR +T
Sbjct: 301 DMTKINLRATIYRKDT 316

The following BLAST results are available for this feature:

BLAST of HG10005887 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885042.1	1.2e-194	85.96	queuine tRNA-ribosyltransferase accessory subunit 2-like [Benincasa hispida]	[more]
XP_008441158.1	2.1e-191	84.21	PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like [Cucumis melo]	[more]
XP_004138668.1	4.1e-187	82.91	queuine tRNA-ribosyltransferase accessory subunit 2 [Cucumis sativus] >KGN63275....	[more]
XP_022152510.1	1.7e-185	81.91	queuine tRNA-ribosyltransferase accessory subunit 2-like [Momordica charantia]	[more]
KAG6602735.1	3.9e-182	80.40	Queuine tRNA-ribosyltransferase accessory subunit 2, partial [Cucurbita argyrosp...	[more]

BLAST of HG10005887 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q28DX0	1.2e-29	32.62	Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Xenopus tropicalis OX=836...	[more]
Q7ZVJ6	6.2e-29	28.19	Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Danio rerio OX=7955 GN=qt...	[more]
Q5ZM96	1.5e-27	31.51	Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Gallus gallus OX=9031 GN=...	[more]
Q9VPY8	3.4e-27	27.51	Queuine tRNA-ribosyltransferase catalytic subunit OS=Drosophila melanogaster OX=...	[more]
B8ZXI1	1.7e-26	28.68	Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Mus musculus OX=10090 GN=...	[more]

BLAST of HG10005887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3I7	1.0e-191	84.21	Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1DE50	8.3e-186	81.91	Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Momordica charantia OX=36...	[more]
A0A6J1JNK0	3.3e-182	80.15	Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1HIG1	1.2e-181	79.90	Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Cucurbita moschata OX=366...	[more]
A0A5A7T128	2.3e-172	93.67	Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Cucumis melo var. makuwa ...	[more]

BLAST of HG10005887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036511	Queuine tRNA-ribosyltransferase-like	GENE3D	3.20.20.105		coord: 1..347 e-value: 2.9E-77 score: 262.0
IPR036511	Queuine tRNA-ribosyltransferase-like	SUPERFAMILY	51713	tRNA-guanine transglycosylase	coord: 1..345
IPR002616	tRNA-guanine(15) transglycosylase-like	TIGRFAM	TIGR00449	TIGR00449	coord: 13..287 e-value: 1.0E-24 score: 85.1
IPR002616	tRNA-guanine(15) transglycosylase-like	PFAM	PF01702	TGT	coord: 12..307 e-value: 3.7E-57 score: 194.1 coord: 311..346 e-value: 3.7E-8 score: 32.9
None	No IPR available	PANTHER	PTHR46064	QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2	coord: 312..350 coord: 1..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005887.1	HG10005887.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0101030	tRNA-guanine transglycosylation
biological_process	GO:0006400	tRNA modification
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008479	queuine tRNA-ribosyltransferase activity
molecular_function	GO:0016763	pentosyltransferase activity