HG10005825 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005825
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Cytochrome c biogenesis protein CCS1
Location	Chr07: 6520097 .. 6523880 (+)
RNA-Seq Expression	HG10005825
Synteny	HG10005825

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTTTGATTCTTAACAATCCAAACCCATCTTTATCCAAACCCATCCTTCTGAAAAACCCTTTTCTTCACTCGCCTTCCCAAATTCGCATTTTCTGCAGAAGAAGCTTCTCTTTCAGCGTCGTCACTTGTAAGATTAAGGCATCACAGGACAAGAAGCAGAAGAATGTCACCAACAAAATTGTGCTTTCGGAAGCAGCGCCGCCGCTTGCGGAGGAGGAGAGTGATAACAGTGGAAACACTGAAGCCGAAGTCAAGTCTGGAAATGGGAATGGCTTGGCGAAGCTGGTGAAGAGATTGCCCAAAAGGATTTTGGGGGCTTTGTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCACCATCTCTGCCCTGATGGCTCTTGGTACTTGTTGATTTTCTTTTAAGTGCTTTTGAGTTTGATTGTTGAATGGATGATGCCTTTGAAGAAATTTTGGATAAGATGAGAATTGTTATAGTTTTTCTTTCTTATCCAGACCATTTGCAAACCCCTTTCCCTTTGCTAGACCAAATATTATTGTAATGCTTCTATGTATTCTGACTACTATCTGGATTGAATGTGGTTCTTAGGGAAAAAAAAACAAAAGAAAATAAAGACAGTAATATTCCTTTTGGTTTAAAATGAGTTTTTATAGGTTAAAAATTACTTTAGATTATAACATTTAAGTCCAGTGTTTCAAATTTATAACAATTTAGTCCTTGAACTATAACATGTAATGATTTAGTCAATGTCTTTAAATTTGTAACAATTTAATCCTACCATGAAAAGTTCCATTAAAATTAAGTATCATTGCTTTATTATGTAACAACTTAATATTTGTAGTTTATAAACAAATTTAATCTCTAATCAATGTATTGATCAACATTTGTAAGAAATAAAATCATAAGATTAAATTGTTACATATTAAAGTTGAGGGACTAAATTCTCGCTAGAAGTTTATAACGAAAAGTGTTTTTTTAACCCTTTTATAATGATAGACAGTCACCTTTCGAACGCCATTGGGCGTATCAGCTGTTGGGCAGGTACAAATGACACCATATTAACGAAAAGTGTTTGGAATTCTTTTGCAGGTACTGTCATTGATCAGGGCGAAGCCCCTGATTTCTATTTCCAGAAGTACCCTGAGGATAATCCTTTGTGGGGATTCTTCAGTTGGAGATGGATTCTTACACTTGGGTTTGATCACATGTACTCATCTACCATTTTTCTAGGGATGTTAGCTCTCCTTGGGATCTCACTCATGGCATGCACGTACACAACCCAGATTCCTCTTGTCAAGGTTGCAAGAAGGTTACAATCCACTTGCTTTCTTTCTCTGTCTCTAAAACACACATTCTGGGAGCAGGATATGAGGTTATAACTCAATGTTTTTTCTTGTTTCTTATAGAATTGTTCAAGTGAAGTACAAGAGGCATTTGCTTGAACAACAGAGATTGGGAGTTTTTCAAAAATTTTCCATAGGAAATGCCTCAGTCAAGAACTGTGGTGCTTTTCTTTACTTGAAATCAGGAAAGCAACTCACTAAGAATCAAACTCATTCATGATAATTTTAGTGTTATTATATGAGAAATACCTAATGCTAGAGAAGCTAAATGTGGTCTCAAGATGCTTCTCCTTATAGCAAGTTTCTTGTCTTCCTGTTGGTAGCTCCCTATGTTTGTAGCTGAAAGTGTAATTCACTAAATAGTGCTAGAAACTGAGATTGAAGTTCTCTAAATGATATAACTCATAAATTCTGCAGGTGTTTATTAAAGGACCAAGTTTATATGCTTTCAAGGGATTAGCTGGACGATTTGCACCAATTGGTGTACATTTGGCCATGCTTTTGATAATGGTTGGTGCAACCCTCAGTGCAACTGGGAGCTTCAGAGGTTCGGTTACAGTTCCACAGGGGTTGAATTTCGTAGTTGGAGATGTTCTGAACCCGAGCGGATTTCTTTCCAAGCCAACTGAAGCTTTCAATACTGAAGTTCACGTCAACAAGTTCTACATGGACTACTATGACAGTGGAGAGGTAAGTCTGGATGAAGAAATCAATAAGAGTAAGAACAGTGTTATAGATATAGTTATATTTCTTAAGAAAAAGAACTGGAGGTGAGGATTAAATGAAGACTTAATTTATCTGTTTGTTAATGACAGCTTTAATATTGAACAACATGCTGATTATCTCTTCCATTAGGGGAACCTTGTTTATATTATAACCATATTGATTCTCATGAATTCCTAGAAAAAGAAAATATATTTCTTTTAAAATTATTGCACGCACAGCTTCAAAGTTAGTCATCACTATTAATGTTCAAGGCTTTCAACATCTGATTTTGCAGGTGAAACAGTTTCATAGTGATCTTTCTTTGTATGATCTTAATGGGAAAGAGGTGATGAGTAAGACAATCAGTGTAAATAATCCTTTACGGTATGGAGGGTTTACAATTTACCAAACCGACTGGGGATTTTCAGCACTGCAAATACTTAAGAATGATGAAGGGCCTTTTAACTTGGCTGTGGCACCTCTAAAGATCAATGGAGACAAGAAGCTTTATGGGACTTTCTTACCAGTTGGCGACGTCGATTCACCCGATGTGAAGGGAATGTATGTCATTTCTTTTTGTACACTTCTGGACTTCTGATGTTTCTATTTTCTTATACCATCTACCAAACGAAATACTAGAAACAAATGTACCGATTCTGAGTTTTGGTTCTTGACCTTGTACACTTGGCATGAAGTTTTTGGTGGCTATCCTTGTTCACCGTGCATGGTATTTTCATATTTCATATTTACTTGTACTCATTTCTTCTCTCCATAATGTACTTTCAGATCAATGCTTGCTCGTGATCTGCAATCCATTGTCTTGTCTGATCAGGAAGGAAAGTTTGTAGGGGTTCGACGTCCTAGCTCTAAGCTTCCGATTGACATCAACGGTATAAAATTCGAAATAGTTGATGCTATTGGCAGCACTGGATTGGAATTGAAGGTGACAGCTCGGAAATGTTCCATCTGTCAATGATATTTCATTTTATTTATTTGATGATTGAACCTTCTGTTTTTCCTTCTTCTTCTTCAGACTGACCCAGGAGTACCTATTGTTTATGCTGGATTTGGTGCTCTAATGCTCACAACATGTGTCAGTTATCTATCTCATTCACAGGTAAATGAGCTTTTCTTCAAACTATTATGATGATGACTCATGTTGAGATGGTTTATTAAATATCAATGTTGTAAAAGGTAATTGAAGATTATGCCTTATAGTCACTCGGGGCAAGGATCTAACTTTTAGCATTAAGACTTGCATCTTCTTTGAACCATTAGAGGCTTACGCCTCTAGAAAACACACTGAGGTTTAAATTCTCTACACCTTGGGTAATGATTAGATAAATAGTATGAATTTGTCTCATTCTTCAAAAAAGAAAAAATACAAAGTTTTGAGTTTTGACGATTTGAGCTATCACTACTTTTACCATTATGACTTTAAAAATATTAAAGACAGATTTATAATACAAGTCAATCCTATGAATGATAATAGTAGACATAAGATATGGGCACTCATTTCTCTTTATAATTTTCTCTACGGAAAGATATGGGCTATACAAGATGGAACGGTAGTGATCGTTGGAGGAAAGACGAACCGTGCGAAGATCGAATTTCCTGAAGAGATAGACCGTTTACTTGATCGAGTTCCAGAAATCATTGAACCATCTCGCAACGAGTTGAATAGCAATGATGGCTATATCCTAAGACAAAAAAATGGGACAAGCCAGTACTAA

mRNA sequence

ATGGAGGGTTTGATTCTTAACAATCCAAACCCATCTTTATCCAAACCCATCCTTCTGAAAAACCCTTTTCTTCACTCGCCTTCCCAAATTCGCATTTTCTGCAGAAGAAGCTTCTCTTTCAGCGTCGTCACTTGTAAGATTAAGGCATCACAGGACAAGAAGCAGAAGAATGTCACCAACAAAATTGTGCTTTCGGAAGCAGCGCCGCCGCTTGCGGAGGAGGAGAGTGATAACAGTGGAAACACTGAAGCCGAAGTCAAGTCTGGAAATGGGAATGGCTTGGCGAAGCTGGTGAAGAGATTGCCCAAAAGGATTTTGGGGGCTTTGTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCACCATCTCTGCCCTGATGGCTCTTGGTACTGTCATTGATCAGGGCGAAGCCCCTGATTTCTATTTCCAGAAGTACCCTGAGGATAATCCTTTGTGGGGATTCTTCAGTTGGAGATGGATTCTTACACTTGGGTTTGATCACATGGATGTTAGCTCTCCTTGGGATCTCACTCATGGCATGCACGTACACAACCCAGATTCCTCTTGTCAAGGTTGCAAGAAGGTTACAATCCACTTGCTTTCTTTCTCTGTCTCTAAAACACACATTCTGGGAGCAGGATATGAGGTGTTTATTAAAGGACCAAGTTTATATGCTTTCAAGGGATTAGCTGGACGATTTGCACCAATTGGTGTACATTTGGCCATGCTTTTGATAATGGTTGGTGCAACCCTCAGTGCAACTGGGAGCTTCAGAGGTTCGGTTACAGTTCCACAGGGGTTGAATTTCGTAGTTGGAGATGTTCTGAACCCGAGCGGATTTCTTTCCAAGCCAACTGAAGCTTTCAATACTGAAGTTCACGTCAACAAGTTCTACATGGACTACTATGACAGTGGAGAGGTGAAACAGTTTCATAGTGATCTTTCTTTGTATGATCTTAATGGGAAAGAGGTGATGAGTAAGACAATCAGTGTAAATAATCCTTTACGGTATGGAGGGTTTACAATTTACCAAACCGACTGGGGATTTTCAGCACTGCAAATACTTAAGAATGATGAAGGGCCTTTTAACTTGGCTGTGGCACCTCTAAAGATCAATGGAGACAAGAAGCTTTATGGGACTTTCTTACCAGTTGGCGACGTCGATTCACCCGATGTGAAGGGAATATCAATGCTTGCTCGTGATCTGCAATCCATTGTCTTGTCTGATCAGGAAGGAAAGTTTGTAGGGGTTCGACGTCCTAGCTCTAAGCTTCCGATTGACATCAACGGTATAAAATTCGAAATAGTTGATGCTATTGGCAGCACTGGATTGGAATTGAAGACTGACCCAGGAGTACCTATTGTTTATGCTGGATTTGGTGCTCTAATGCTCACAACATGTGTCAGTTATCTATCTCATTCACAGATATGGGCTATACAAGATGGAACGGTAGTGATCGTTGGAGGAAAGACGAACCGTGCGAAGATCGAATTTCCTGAAGAGATAGACCGTTTACTTGATCGAGTTCCAGAAATCATTGAACCATCTCGCAACGAGTTGAATAGCAATGATGGCTATATCCTAAGACAAAAAAATGGGACAAGCCAGTACTAA

Coding sequence (CDS)

ATGGAGGGTTTGATTCTTAACAATCCAAACCCATCTTTATCCAAACCCATCCTTCTGAAAAACCCTTTTCTTCACTCGCCTTCCCAAATTCGCATTTTCTGCAGAAGAAGCTTCTCTTTCAGCGTCGTCACTTGTAAGATTAAGGCATCACAGGACAAGAAGCAGAAGAATGTCACCAACAAAATTGTGCTTTCGGAAGCAGCGCCGCCGCTTGCGGAGGAGGAGAGTGATAACAGTGGAAACACTGAAGCCGAAGTCAAGTCTGGAAATGGGAATGGCTTGGCGAAGCTGGTGAAGAGATTGCCCAAAAGGATTTTGGGGGCTTTGTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCACCATCTCTGCCCTGATGGCTCTTGGTACTGTCATTGATCAGGGCGAAGCCCCTGATTTCTATTTCCAGAAGTACCCTGAGGATAATCCTTTGTGGGGATTCTTCAGTTGGAGATGGATTCTTACACTTGGGTTTGATCACATGGATGTTAGCTCTCCTTGGGATCTCACTCATGGCATGCACGTACACAACCCAGATTCCTCTTGTCAAGGTTGCAAGAAGGTTACAATCCACTTGCTTTCTTTCTCTGTCTCTAAAACACACATTCTGGGAGCAGGATATGAGGTGTTTATTAAAGGACCAAGTTTATATGCTTTCAAGGGATTAGCTGGACGATTTGCACCAATTGGTGTACATTTGGCCATGCTTTTGATAATGGTTGGTGCAACCCTCAGTGCAACTGGGAGCTTCAGAGGTTCGGTTACAGTTCCACAGGGGTTGAATTTCGTAGTTGGAGATGTTCTGAACCCGAGCGGATTTCTTTCCAAGCCAACTGAAGCTTTCAATACTGAAGTTCACGTCAACAAGTTCTACATGGACTACTATGACAGTGGAGAGGTGAAACAGTTTCATAGTGATCTTTCTTTGTATGATCTTAATGGGAAAGAGGTGATGAGTAAGACAATCAGTGTAAATAATCCTTTACGGTATGGAGGGTTTACAATTTACCAAACCGACTGGGGATTTTCAGCACTGCAAATACTTAAGAATGATGAAGGGCCTTTTAACTTGGCTGTGGCACCTCTAAAGATCAATGGAGACAAGAAGCTTTATGGGACTTTCTTACCAGTTGGCGACGTCGATTCACCCGATGTGAAGGGAATATCAATGCTTGCTCGTGATCTGCAATCCATTGTCTTGTCTGATCAGGAAGGAAAGTTTGTAGGGGTTCGACGTCCTAGCTCTAAGCTTCCGATTGACATCAACGGTATAAAATTCGAAATAGTTGATGCTATTGGCAGCACTGGATTGGAATTGAAGACTGACCCAGGAGTACCTATTGTTTATGCTGGATTTGGTGCTCTAATGCTCACAACATGTGTCAGTTATCTATCTCATTCACAGATATGGGCTATACAAGATGGAACGGTAGTGATCGTTGGAGGAAAGACGAACCGTGCGAAGATCGAATTTCCTGAAGAGATAGACCGTTTACTTGATCGAGTTCCAGAAATCATTGAACCATCTCGCAACGAGTTGAATAGCAATGATGGCTATATCCTAAGACAAAAAAATGGGACAAGCCAGTACTAA

Protein sequence

MEGLILNNPNPSLSKPILLKNPFLHSPSQIRIFCRRSFSFSVVTCKIKASQDKKQKNVTNKIVLSEAAPPLAEEESDNSGNTEAEVKSGNGNGLAKLVKRLPKRILGALSNLPLAIGEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPWDLTHGMHVHNPDSSCQGCKKVTIHLLSFSVSKTHILGAGYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDVKGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPEIIEPSRNELNSNDGYILRQKNGTSQY

Homology

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BLAST of HG10005825 vs. NCBI nr
Match: XP_038889049.1 (cytochrome c biogenesis protein CCS1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 866.7 bits (2238), Expect = 1.1e-247
Identity = 452/557 (81.15%), Postives = 475/557 (85.28%), Query Frame = 0


Query: 1   MEGLILNNPNPSLSKPILLKNPFLH---------SPSQIRIFCRRSFSFSVVTCKIKASQ 60
           MEGLILNNP PSLSKP LLK PFLH           +Q+R FC        VTCKIKASQ
Sbjct: 21  MEGLILNNPKPSLSKPFLLKTPFLHYVFRHQITPRAAQLRSFC--------VTCKIKASQ 80

Query: 61  DKKQKNVTNKIVLSEAAPPLAEEESDNSGNTEAEVKSGNGNGLAKLVKRLPKRILGALSN 120
           DKKQKNV+NKIVLSEAAPPLAEEESDN+GN EAEVK+GNG+GLAKLVKRLPKRILGALSN
Sbjct: 81  DKKQKNVSNKIVLSEAAPPLAEEESDNTGNAEAEVKAGNGSGLAKLVKRLPKRILGALSN 140

Query: 121 LPLAIGEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVS 180
           LPLAIGEMFTI+ALMALGTVIDQGEAPDFYFQKYPEDNPLWGFF+WRWILTLGFDHM  S
Sbjct: 141 LPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMYSS 200

Query: 181 SPW--------------------DLTHGMHVHNPDSSCQGCKKV----TIHLLSFSVSKT 240
           + +                     L       N   S +  +K+     +   S      
Sbjct: 201 TIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGV 260

Query: 241 HILGAGYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGL 300
            ++GAGYEVFIKGP+LYAFKGLAGRFAPIGVHLAMLLIM GATLSATGSFRGSVTVPQGL
Sbjct: 261 ILMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGL 320

Query: 301 NFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSK 360
           NFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSL+DLNGKEVM K
Sbjct: 321 NFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRK 380

Query: 361 TISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDV 420
           TISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDV
Sbjct: 381 TISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDV 440

Query: 421 DSPDVKGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELK 480
           DSPDVKGISMLARDLQSIVL DQEGKFVGVRRPSSKLPIDINGIK EIVDAIGSTGLELK
Sbjct: 441 DSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGSTGLELK 500

Query: 481 TDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLD 525
           TDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGT+VI+GGKTNRAK+EFPEE+DRLLD
Sbjct: 501 TDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTIVIIGGKTNRAKVEFPEEMDRLLD 560

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BLAST of HG10005825 vs. NCBI nr
Match: XP_008454876.1 (PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo])

HSP 1 Score: 848.2 bits (2190), Expect = 3.9e-242
Identity = 447/552 (80.98%), Postives = 471/552 (85.33%), Query Frame = 0


Query: 1   MEGLILNNPNPSLSKPILLKNPFLHSPSQIRIFCR----RSFSFSVVTCKIKASQDKKQK 60
           ME LILNNPNPSLSKP LLK PFLHS    +I  R    RSFS   VTCK KASQDKK K
Sbjct: 11  MERLILNNPNPSLSKPFLLKTPFLHSVFGHQITPRTAQIRSFS---VTCKNKASQDKKLK 70

Query: 61  NVTNKIVLSEAAPPLAEEESDNSGNTEAEVKSGNGNGLAKLVKRLPKRILGALSNLPLAI 120
           NV+NKIVLSEAAPPLAEEESD SGN EAEVK GNG+G  KLVKRLPKRILGALSNLPLAI
Sbjct: 71  NVSNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSGSTKLVKRLPKRILGALSNLPLAI 130

Query: 121 GEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPW-- 180
           GEMFTI+ALMALGTVIDQGEAPDFYFQKYPEDNPLWGFF+WRWILTLGFDHM  S+ +  
Sbjct: 131 GEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMYSSTIFLG 190

Query: 181 ------------------DLTHGMHVHNPDSSCQGCKKV----TIHLLSFSVSKTHILGA 240
                              L       N   S +  +K+     +   S       ++GA
Sbjct: 191 MLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGA 250

Query: 241 GYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVVG 300
           GYEVFIKGP+LYAFKGLAGRFAPIGVHLAMLLIM GATLSATGSFRGSVTVPQGLNFVVG
Sbjct: 251 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVG 310

Query: 301 DVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISVN 360
           DVLNPSGFLSKPTEAFNTEVHVNKFYM+YYDSGEVKQF+SDLSL+DLNGKEVM KTISVN
Sbjct: 311 DVLNPSGFLSKPTEAFNTEVHVNKFYMNYYDSGEVKQFYSDLSLFDLNGKEVMRKTISVN 370

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSP+V
Sbjct: 371 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPNV 430

Query: 421 KGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVL DQEGKFVGVRRPSS+LPIDINGIK EIVDAIGSTGLELKTDPGV
Sbjct: 431 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 490

Query: 481 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPEI 525
           PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAK+EFPEE+DRLLD+VPEI
Sbjct: 491 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEI 550

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BLAST of HG10005825 vs. NCBI nr
Match: KAA0031251.1 (cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo var. makuwa] >TYK06702.1 cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo var. makuwa])

HSP 1 Score: 848.2 bits (2190), Expect = 3.9e-242
Identity = 447/552 (80.98%), Postives = 471/552 (85.33%), Query Frame = 0


Query: 1   MEGLILNNPNPSLSKPILLKNPFLHSPSQIRIFCR----RSFSFSVVTCKIKASQDKKQK 60
           ME LILNNPNPSLSKP LLK PFLHS    +I  R    RSFS   VTCK KASQDKK K
Sbjct: 1   MERLILNNPNPSLSKPFLLKTPFLHSVFGHQITPRTAQIRSFS---VTCKNKASQDKKLK 60

Query: 61  NVTNKIVLSEAAPPLAEEESDNSGNTEAEVKSGNGNGLAKLVKRLPKRILGALSNLPLAI 120
           NV+NKIVLSEAAPPLAEEESD SGN EAEVK GNG+G  KLVKRLPKRILGALSNLPLAI
Sbjct: 61  NVSNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSGSTKLVKRLPKRILGALSNLPLAI 120

Query: 121 GEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPW-- 180
           GEMFTI+ALMALGTVIDQGEAPDFYFQKYPEDNPLWGFF+WRWILTLGFDHM  S+ +  
Sbjct: 121 GEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMYSSTIFLG 180

Query: 181 ------------------DLTHGMHVHNPDSSCQGCKKV----TIHLLSFSVSKTHILGA 240
                              L       N   S +  +K+     +   S       ++GA
Sbjct: 181 MLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGA 240

Query: 241 GYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVVG 300
           GYEVFIKGP+LYAFKGLAGRFAPIGVHLAMLLIM GATLSATGSFRGSVTVPQGLNFVVG
Sbjct: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVG 300

Query: 301 DVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISVN 360
           DVLNPSGFLSKPTEAFNTEVHVNKFYM+YYDSGEVKQF+SDLSL+DLNGKEVM KTISVN
Sbjct: 301 DVLNPSGFLSKPTEAFNTEVHVNKFYMNYYDSGEVKQFYSDLSLFDLNGKEVMRKTISVN 360

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSP+V
Sbjct: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPNV 420

Query: 421 KGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVL DQEGKFVGVRRPSS+LPIDINGIK EIVDAIGSTGLELKTDPGV
Sbjct: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 480

Query: 481 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPEI 525
           PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAK+EFPEE+DRLLD+VPEI
Sbjct: 481 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEI 540

[Close]

BLAST of HG10005825 vs. NCBI nr
Match: XP_011658930.1 (cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis sativus] >KGN43987.1 hypothetical protein Csa_017703 [Cucumis sativus])

HSP 1 Score: 835.1 bits (2156), Expect = 3.4e-238
Identity = 440/552 (79.71%), Postives = 467/552 (84.60%), Query Frame = 0


Query: 1   MEGLILNNPNPSLSKPILLKNPFLHSPSQIRIFCR----RSFSFSVVTCKIKASQDKKQK 60
           ME LILNN NPSLSKP LLK  FLHS    +I  R    RSFS   VTCK KASQDKK K
Sbjct: 11  MERLILNNLNPSLSKPFLLKTSFLHSVFSHQITLRTAQIRSFS---VTCKNKASQDKKLK 70

Query: 61  NVTNKIVLSEAAPPLAEEESDNSGNTEAEVKSGNGNGLAKLVKRLPKRILGALSNLPLAI 120
           N +NKIVLSEAAPPLAEEESD SGN EAEVK GNG+   KLVKRLPKRILGALSNLPLAI
Sbjct: 71  NASNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSRSMKLVKRLPKRILGALSNLPLAI 130

Query: 121 GEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPW-- 180
           GEMFTI+ALMALGTVIDQGEAPDFYFQKYPEDNPLWGFF+WRWILTLGFDHM  S+ +  
Sbjct: 131 GEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFNWRWILTLGFDHMYSSTIFLG 190

Query: 181 ------------------DLTHGMHVHNPDSSCQGCKKV----TIHLLSFSVSKTHILGA 240
                              L       N   S +  +K+     +   S       ++GA
Sbjct: 191 MLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGA 250

Query: 241 GYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVVG 300
           GYEVFIKGP+LYAFKGLAGRFAPIGVHLAMLLIM GATLSATGSFRGSVTVPQGLNFVVG
Sbjct: 251 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVG 310

Query: 301 DVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISVN 360
           DVLNPSGFL+KPTEAFNTEVHVNKFYM+YYDSGE+KQF+SDLSL+DLNGKEVM KTISVN
Sbjct: 311 DVLNPSGFLAKPTEAFNTEVHVNKFYMNYYDSGEIKQFYSDLSLFDLNGKEVMRKTISVN 370

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDV+SPDV
Sbjct: 371 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVNSPDV 430

Query: 421 KGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVL DQEGKFVGVRRPSS+LPIDINGIK EIVDAIGSTGLELKTDPGV
Sbjct: 431 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 490

Query: 481 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPEI 525
           PIVYAGFGALMLTTCVSYLSHSQ+WAIQDGTVVIVGGKTNRAK+EFPEE+DRLLD+VPEI
Sbjct: 491 PIVYAGFGALMLTTCVSYLSHSQVWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEI 550

[Close]

BLAST of HG10005825 vs. NCBI nr
Match: XP_023530089.1 (cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 828.6 bits (2139), Expect = 3.2e-236
Identity = 437/553 (79.02%), Postives = 466/553 (84.27%), Query Frame = 0


Query: 1   MEGLILNNPNPSLSKPILLKNPFLHSPSQIRI---FCRRSFSFSVVTCKIKASQDKKQKN 60
           MEGLIL+NPNP LS     K PFLHS  + +I    C R+ SFS VTCK+KASQDKK KN
Sbjct: 1   MEGLILHNPNPYLS-----KTPFLHSSFRPQITPNLCCRTLSFS-VTCKVKASQDKKPKN 60

Query: 61  VTNKIVLSEAAPPLAEEESDNSG-NTEAEVKSGNGNG-LAKLVKRLPKRILGALSNLPLA 120
           V+NKIVLSEAAPPLAEE  DN+G NTEAEVK GNG+G L KLVKRLPKRILGALSNLPLA
Sbjct: 61  VSNKIVLSEAAPPLAEESDDNNGNNTEAEVKPGNGSGLLMKLVKRLPKRILGALSNLPLA 120

Query: 121 IGEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPW- 180
           IGEMFTI+ALMALGT IDQGEAPDFYFQKYPEDNP+WGFF+WRWILTLGFDHM  S+ + 
Sbjct: 121 IGEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTLGFDHMYTSTIFL 180

Query: 181 -------------------DLTHGMHVHNPDSSCQGCKKV----TIHLLSFSVSKTHILG 240
                               L       N   S    +K+     +   S       ++G
Sbjct: 181 AMLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGDAIRKLECSEILPRASVQDLGVVLMG 240

Query: 241 AGYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVV 300
           AGYEVFIKGP+LYAFKGLAGRFAPIGVHLAMLLIM GATLSA GSFRGSVTVPQGLNFVV
Sbjct: 241 AGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRGSVTVPQGLNFVV 300

Query: 301 GDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISV 360
           GDVLNPSGFLSKPTEAFNTEVHVN FYMDYYDSGEVKQFHSDLSL+DLNGKEVM KTISV
Sbjct: 301 GDVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRKTISV 360

Query: 361 NNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPD 420
           NNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPD
Sbjct: 361 NNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPD 420

Query: 421 VKGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPG 480
           VKGISMLARDLQSIVL DQEGKFVGVRRPSSKLPIDI+G+K EI+DAIGSTGLELKTDPG
Sbjct: 421 VKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAIGSTGLELKTDPG 480

Query: 481 VPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPE 525
           VP+VYAGFGALMLTTC+S+LSHSQIWAIQDGTVVIVGGKTNRAK+EFPEEID LLDRVPE
Sbjct: 481 VPVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEIDSLLDRVPE 540

[Close]

BLAST of HG10005825 vs. ExPASy Swiss-Prot
Match: Q9XIA4 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCS1 PE=1 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 1.6e-182
Identity = 340/534 (63.67%), Postives = 404/534 (75.66%), Query Frame = 0


Query: 16  PILLKNPFLHSPSQIRIFCRRSFSFSVVT-CKIKASQDKKQ-----KNVTNKIVLSEAAP 75
           P +L    +H  S+   +  R+ + S++T CK++  QD  Q     +N+T  I LS++AP
Sbjct: 7   PKILHFSKIHPFSRPSSYLCRTRNVSLITNCKLQKPQDGNQRSSSNRNLTKTISLSDSAP 66

Query: 76  PLAEEESDN--SGNTEAEVKSGNGNGLAKLVKRLPKRILGALSNLPLAIGEMFTISALMA 135
           P+ EE  D    G        G+G G    +K LP+++L  LSNLPLAI EMFTI+ALMA
Sbjct: 67  PVTEETGDGIVKGGGNGGGGGGDGRGGLGFLKILPRKVLSVLSNLPLAITEMFTIAALMA 126

Query: 136 LGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPWDLTHGMHVHNPDS 195
           LGTVI+QGE PDFYFQKYPEDNP+ GFF+WRWI TLG DHM  S+P  L  GM V    S
Sbjct: 127 LGTVIEQGETPDFYFQKYPEDNPVLGFFTWRWISTLGLDHM-YSAPIFL--GMLVLLAAS 186

Query: 196 -----------------------SCQGCKKV----TIHLLSFSVSKTHILGAGYEVFIKG 255
                                  S +  KK     T+   S       ++G G+EVF+KG
Sbjct: 187 LMACTYTTQIPLVKVARRWSFMKSDEAIKKQEFADTLPRASIQDLGMILMGDGFEVFMKG 246

Query: 256 PSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGF 315
           PSLYAFKGLAGRFAPIGVH+AMLLIMVG TLSATGSFRGSVTVPQGLNFV+GDVL P GF
Sbjct: 247 PSLYAFKGLAGRFAPIGVHIAMLLIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLAPIGF 306

Query: 316 LSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISVNNPLRYGGF 375
            S PT+AFNTEVHVN+F MDYYDSGEV QFHSDLSL DLNGKEV+ KTISVN+PLRYGG 
Sbjct: 307 FSIPTDAFNTEVHVNRFTMDYYDSGEVSQFHSDLSLRDLNGKEVLRKTISVNDPLRYGGV 366

Query: 376 TIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDVKGISMLAR 435
           T+YQTDW FSALQ+ K+ EGPFNLA+AP+KINGDKKLYGTFLPVGD ++P+VKGISMLAR
Sbjct: 367 TVYQTDWSFSALQVTKDGEGPFNLAMAPIKINGDKKLYGTFLPVGDTNAPNVKGISMLAR 426

Query: 436 DLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPGVPIVYAGFG 495
           DLQSIV+ D +GKF G+RRPSSKLPI+ING+K  I DAIGSTGLELKTDPGVP+VYAGFG
Sbjct: 427 DLQSIVVYDLDGKFAGIRRPSSKLPIEINGMKIVIEDAIGSTGLELKTDPGVPVVYAGFG 486

Query: 496 ALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPEIIE 515
           ALMLTTC+SYLSHSQIWA+Q+GT ++VGGKTNRAK +FP++++RLLD+VPE+I+
Sbjct: 487 ALMLTTCISYLSHSQIWALQNGTALVVGGKTNRAKNQFPDDMNRLLDQVPELIK 537

[Close]

BLAST of HG10005825 vs. ExPASy Swiss-Prot
Match: Q75KA9 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CCS1 PE=2 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 8.0e-174
Identity = 310/497 (62.37%), Postives = 370/497 (74.45%), Query Frame = 0


Query: 61  KIVLSEAAPPLAEE------ESDNSGNTEAEVKSGNGNGLAKLVKRLPKRILGALSNLPL 120
           ++V  +AAPP+++       E +  G  E +V     N    LV+RL KR L  LSNLPL
Sbjct: 68  QVVFFDAAPPVSQRGGGGGGEGEGEGEGEGKVARRKENAALGLVRRLTKRTLSLLSNLPL 127

Query: 121 AIGEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHM------ 180
           AI EMF I+ALMALGTVIDQGEAP +YF+K+PEDNP++GF +WRWILT GFDHM      
Sbjct: 128 AISEMFAIAALMALGTVIDQGEAPSYYFEKFPEDNPVFGFITWRWILTPGFDHMFSSPVF 187

Query: 181 -----------------------DVSSPWDLTHGMHVHNPDSSCQGCKKVTIHLLSFSVS 240
                                   V+  W   H           +   + +I  L     
Sbjct: 188 LGLLALLAASLMACTYTTQIPIVKVARRWSFMHSAGSIRKQEFAESLPRASIQDLG---- 247

Query: 241 KTHILGAGYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQ 300
              ++G GYEVF KGPSLYAFKGLAGRFAPIGVH+AM+ IM GATLSATGSF+GSV VPQ
Sbjct: 248 -VILMGYGYEVFTKGPSLYAFKGLAGRFAPIGVHIAMIFIMAGATLSATGSFKGSVDVPQ 307

Query: 301 GLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVM 360
           GLNFV+GDV+ P G LS   + FNTEVHVN+FYM+YYDSGEV QF+SDLSL+DL+GKEVM
Sbjct: 308 GLNFVIGDVMKPKGVLSFVPDVFNTEVHVNRFYMEYYDSGEVSQFYSDLSLFDLDGKEVM 367

Query: 361 SKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG 420
            KTI VN+PLRYGG TIYQTDWGFSALQ+ KN EGPFNLA+APLK+NGDKKL+GT LP+ 
Sbjct: 368 RKTIKVNDPLRYGGVTIYQTDWGFSALQVKKNGEGPFNLAMAPLKLNGDKKLFGTLLPLE 427

Query: 421 DVDSPDVKGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLE 480
           +  S +VKGISMLARDLQSIVL DQEGKFVGVRRPSSKLPI+I+G +  I DAIGSTGL+
Sbjct: 428 NSGSSNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIEIDGNEIVIEDAIGSTGLD 487

Query: 481 LKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRL 523
           LKTDPG+PIVYAGFGALMLTTC+SYLSHSQIWA+QDG+ V++GGKTNRAK+EF EE++RL
Sbjct: 488 LKTDPGIPIVYAGFGALMLTTCISYLSHSQIWALQDGSTVVIGGKTNRAKLEFSEEMNRL 547

[Close]

BLAST of HG10005825 vs. ExPASy Swiss-Prot
Match: Q8GTZ9 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CCS1 PE=1 SV=2)

HSP 1 Score: 327.0 bits (837), Expect = 3.9e-88
Identity = 216/555 (38.92%), Postives = 295/555 (53.15%), Query Frame = 0


Query: 43  VTCKIKASQ--DKKQKNVTNKIVLSEAAPPL----AEEESD-NSGNTEAEVKSGNGNG-- 102
           V C  K  Q  DKK+ NVT+K+ L    P L    A   +D  S   +A   SG G G  
Sbjct: 36  VRCFAKGGQPGDKKKLNVTDKLRLGNTPPTLDVLKAPRPTDAPSAIDDAPSTSGLGLGGG 95

Query: 103 --------LAKLVKRLPKRILGALSNLPLAIGEMFTISALMALGTVIDQGEAPDFYFQKY 162
                    +  V+   +R++  LS+LP AI  M  I+ L  LGT I Q ++ ++Y   Y
Sbjct: 96  VASPRTLVQSNAVQVAWRRLMKELSSLPRAIAIMALIAVLSGLGTFIPQNKSIEYYLVNY 155

Query: 163 PED-NPLWGFFSWRWILTLGFDHMDVSSPWDLTHGM------------------------ 222
           P+    + GF +   ILTL  DH+  +  + L+ G+                        
Sbjct: 156 PDGAEKVLGFLTGDLILTLQLDHIYTADYFYLSMGLLAASLAACTYTRQWPAVKVAQRWR 215

Query: 223 HVHNPDSSCQGCKKVTIHLLSFSVSKTHILGAGYEVFIKGPSLYAFKGLAGRFAPIGVHL 282
            +  P S  +  +   +     S     +L  GY+VF+K  SLY FKGLAG+  PIGVH 
Sbjct: 216 FLTQPKSLLKQGRTEVLPNARVSDLGAILLQRGYQVFVKDGSLYGFKGLAGKLGPIGVHA 275

Query: 283 AMLLIMVGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMD 342
           A+LL + G   S  G+ +G+V  P+G +F V   L PS  ++    + +  +HVNKF +D
Sbjct: 276 ALLLCLFGTAWSGFGTLKGNVMCPEGQDFQVASFLQPSSPIASMPASASNVIHVNKFTID 335

Query: 343 YYDSGEVKQFHSDLSLYD--LNGKEVMSKTISVNNPLRYGGFTIYQTDWGFSA--LQILK 402
           Y   G V QF+SDLSL D    GKE+M KTISVN+P R+ G T+YQTDW  SA  L++L 
Sbjct: 336 YRPDGSVAQFYSDLSLLDPAQGGKEMMRKTISVNDPFRFNGVTMYQTDWSLSAVTLRVLG 395

Query: 403 ND------------------EGP-----------------FNLAVAPL--KINGDKKLYG 462
            D                   GP                 FNL +A L  K     +L+ 
Sbjct: 396 QDAPLARAAQAAEAQAAASTSGPTSSASSTSDALPQQRTAFNLPMASLEGKPGVAGRLWA 455

Query: 463 TFLPVGD--VDSPDVKGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVD 513
           TFLP+ +   D    KGIS+LARD QS+V  D +G+FVGVRRP S  PI++ G+   + D
Sbjct: 456 TFLPLAEPGQDGSAPKGISILARDPQSVVFYDAKGQFVGVRRPGSGKPIEVEGLALVVED 515

[Close]

BLAST of HG10005825 vs. ExPASy Swiss-Prot
Match: Q8DL16 (Cytochrome c biogenesis protein CcsB OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=ccsB PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.5e-75
Identity = 159/427 (37.24%), Postives = 236/427 (55.27%), Query Frame = 0


Query: 103 KRILGALSNLPLAIGEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILT 162
           +R+L  L +L LAI  +  I+     GTVI+QG++  FY   YPE+  L+GF SWR +L 
Sbjct: 8   RRVLALLGDLRLAILLLLVIAIASMAGTVIEQGQSLSFYQANYPENPALFGFLSWRVLLA 67

Query: 163 LGFDHMDVSSPWDLT-------------------------HGMHVHNPDSSCQGCKKVTI 222
           LG DH+   +PW LT                            +   P    +     TI
Sbjct: 68  LGLDHV-YRTPWYLTLLVLFGASLTACTLTRQVPALTTAQRWHYYQEPRQFTKLALSTTI 127

Query: 223 HLLSFSVSKTHILGAGYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSF 282
              S +   T +   GY V+     LYA KGL GR  PI VH +MLLI++G  L A   F
Sbjct: 128 PQGSLTALATALRAKGYRVWQTDTQLYARKGLVGRLGPIVVHASMLLILLGGILGALTGF 187

Query: 283 RGSVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLY 342
                +P G    +  ++        P +     V VN+F++DY D+GE+ QF+SDLS+ 
Sbjct: 188 MAQELIPSGETVHLQHIVEAGPLARIPQD---WSVKVNRFWIDYTDAGEIDQFYSDLSIQ 247

Query: 343 DLNGKEVMSKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKL 402
           D  G+EV   TI VN PLRYGG ++YQ DWG +A++   N      L +APL   G  +L
Sbjct: 248 DAKGQEVKRGTIHVNRPLRYGGVSLYQADWGIAAIRFRLNRSPVLQLPMAPLDTGGKGRL 307

Query: 403 YGTFLPVGDVDSPDVK-GISMLARDLQ-SIVLSDQEGKFVGVRRPSSKLPIDINGIKFEI 462
           +GT+LP      PD+  G+S++ARDLQ +++L   +G+F+   R  + +  ++NG+   +
Sbjct: 308 WGTWLPT----RPDLSAGVSLIARDLQGTVLLYGPKGEFLTSLR--TGMSTEVNGVTLTL 367

Query: 463 VDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAK 503
           V+ +GSTGL++K DPG+P+ YAGF  LM    +SY+SHSQ+W +Q+   + +GG+TNRA+
Sbjct: 368 VELVGSTGLQIKADPGIPLFYAGFALLMAGVIMSYVSHSQVWGLQENQRLYLGGRTNRAQ 424

[Close]

BLAST of HG10005825 vs. ExPASy Swiss-Prot
Match: Q118K5 (Cytochrome c biogenesis protein CcsB OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=ccsB PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.1e-74
Identity = 166/452 (36.73%), Postives = 255/452 (56.42%), Query Frame = 0


Query: 85  EVKSGNGNGLAKLVKRLPKRILGALSNLPLAIGEMFTISALMALGTVIDQGEAPDFYFQK 144
           +V+  + N L   ++   + IL  L++L LAI  +  I+     GTVI+QGE+  FY + 
Sbjct: 2   DVEDSDKNSLINPLRIFKREILPLLADLRLAIALLLIIAICSISGTVIEQGESIAFYQEN 61

Query: 145 YPEDNPLWGFFSWRWILTLGFDHMDVSSPWDLTHGMHVHNPDSSCQGCKKV--------- 204
           YPE   L+GF +W+ IL L  DH+   + W L+  +      ++C   +++         
Sbjct: 62  YPEKPALFGFLTWKVILLLELDHV-YRTWWFLSILILFGASLTACTFTRQLPALKSANRW 121

Query: 205 ----------------TIHLLSFSVSKTHILGAGYEVFIKGPSLYAFKGLAGRFAPIGVH 264
                            I   S    +  +   GY+   +G  LY  KG+ G+  PI VH
Sbjct: 122 KFYNKKQQFKNLALSAEIETASLDSLEEILQKRGYKTSKEGDKLYGRKGIIGKVGPIIVH 181

Query: 265 LAMLLIMVGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYM 324
            +ML+I+ G+ + +   F G   VP G  F V ++++ +G  +K     N  V VN+F++
Sbjct: 182 ASMLIILAGSIIGSMTGFLGQEIVPSGETFQVKNIID-AGIFAKSQIPKNWSVRVNRFWI 241

Query: 325 DYYDSGEVKQFHSDLSLYDLNGKEVMSKTISVNNPLRYGGFTIYQTDWGFSALQILKNDE 384
           DY  SG + QF+SDLS+ D +G+EV  KTI VN P+RY G T+YQ DW  +A+++  N  
Sbjct: 242 DYTPSGGIDQFYSDLSILDKSGEEVDRKTIFVNQPMRYHGVTMYQADWAIAAVKVRVNKS 301

Query: 385 GPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV-KGISMLARDLQ-SIVLSDQEGKFVGV 444
             F L +A L   G  K++GT++P+     PD+ +G+S+LA+DLQ ++++ D  GK V  
Sbjct: 302 PVFRLPMAQLNTEGGGKIWGTWVPI----KPDLSEGVSLLAKDLQGNVLVYDTSGKLVAS 361

Query: 445 RRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIW 504
            R    + I+++G+   I   IGSTGL++K DPG+PIVY GFG LML+  +SY+SHSQIW
Sbjct: 362 VREG--MFIEVSGVTLFIDKIIGSTGLQIKADPGIPIVYLGFGLLMLSVLMSYVSHSQIW 421

Query: 505 AIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRV 510
           A Q+   + +GGKTNRA + F  EI  +LDR+
Sbjct: 422 AFQESERLYIGGKTNRANVTFEREILDILDRL 445

[Close]

BLAST of HG10005825 vs. ExPASy TrEMBL
Match: A0A5D3C5Y2 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00030 PE=3 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.9e-242
Identity = 447/552 (80.98%), Postives = 471/552 (85.33%), Query Frame = 0


Query: 1   MEGLILNNPNPSLSKPILLKNPFLHSPSQIRIFCR----RSFSFSVVTCKIKASQDKKQK 60
           ME LILNNPNPSLSKP LLK PFLHS    +I  R    RSFS   VTCK KASQDKK K
Sbjct: 1   MERLILNNPNPSLSKPFLLKTPFLHSVFGHQITPRTAQIRSFS---VTCKNKASQDKKLK 60

Query: 61  NVTNKIVLSEAAPPLAEEESDNSGNTEAEVKSGNGNGLAKLVKRLPKRILGALSNLPLAI 120
           NV+NKIVLSEAAPPLAEEESD SGN EAEVK GNG+G  KLVKRLPKRILGALSNLPLAI
Sbjct: 61  NVSNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSGSTKLVKRLPKRILGALSNLPLAI 120

Query: 121 GEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPW-- 180
           GEMFTI+ALMALGTVIDQGEAPDFYFQKYPEDNPLWGFF+WRWILTLGFDHM  S+ +  
Sbjct: 121 GEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMYSSTIFLG 180

Query: 181 ------------------DLTHGMHVHNPDSSCQGCKKV----TIHLLSFSVSKTHILGA 240
                              L       N   S +  +K+     +   S       ++GA
Sbjct: 181 MLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGA 240

Query: 241 GYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVVG 300
           GYEVFIKGP+LYAFKGLAGRFAPIGVHLAMLLIM GATLSATGSFRGSVTVPQGLNFVVG
Sbjct: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVG 300

Query: 301 DVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISVN 360
           DVLNPSGFLSKPTEAFNTEVHVNKFYM+YYDSGEVKQF+SDLSL+DLNGKEVM KTISVN
Sbjct: 301 DVLNPSGFLSKPTEAFNTEVHVNKFYMNYYDSGEVKQFYSDLSLFDLNGKEVMRKTISVN 360

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSP+V
Sbjct: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPNV 420

Query: 421 KGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVL DQEGKFVGVRRPSS+LPIDINGIK EIVDAIGSTGLELKTDPGV
Sbjct: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 480

Query: 481 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPEI 525
           PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAK+EFPEE+DRLLD+VPEI
Sbjct: 481 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEI 540

[Close]

BLAST of HG10005825 vs. ExPASy TrEMBL
Match: A0A1S3BZ46 (cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495188 PE=3 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.9e-242
Identity = 447/552 (80.98%), Postives = 471/552 (85.33%), Query Frame = 0


Query: 1   MEGLILNNPNPSLSKPILLKNPFLHSPSQIRIFCR----RSFSFSVVTCKIKASQDKKQK 60
           ME LILNNPNPSLSKP LLK PFLHS    +I  R    RSFS   VTCK KASQDKK K
Sbjct: 11  MERLILNNPNPSLSKPFLLKTPFLHSVFGHQITPRTAQIRSFS---VTCKNKASQDKKLK 70

Query: 61  NVTNKIVLSEAAPPLAEEESDNSGNTEAEVKSGNGNGLAKLVKRLPKRILGALSNLPLAI 120
           NV+NKIVLSEAAPPLAEEESD SGN EAEVK GNG+G  KLVKRLPKRILGALSNLPLAI
Sbjct: 71  NVSNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSGSTKLVKRLPKRILGALSNLPLAI 130

Query: 121 GEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPW-- 180
           GEMFTI+ALMALGTVIDQGEAPDFYFQKYPEDNPLWGFF+WRWILTLGFDHM  S+ +  
Sbjct: 131 GEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMYSSTIFLG 190

Query: 181 ------------------DLTHGMHVHNPDSSCQGCKKV----TIHLLSFSVSKTHILGA 240
                              L       N   S +  +K+     +   S       ++GA
Sbjct: 191 MLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGA 250

Query: 241 GYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVVG 300
           GYEVFIKGP+LYAFKGLAGRFAPIGVHLAMLLIM GATLSATGSFRGSVTVPQGLNFVVG
Sbjct: 251 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVG 310

Query: 301 DVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISVN 360
           DVLNPSGFLSKPTEAFNTEVHVNKFYM+YYDSGEVKQF+SDLSL+DLNGKEVM KTISVN
Sbjct: 311 DVLNPSGFLSKPTEAFNTEVHVNKFYMNYYDSGEVKQFYSDLSLFDLNGKEVMRKTISVN 370

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSP+V
Sbjct: 371 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPNV 430

Query: 421 KGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVL DQEGKFVGVRRPSS+LPIDINGIK EIVDAIGSTGLELKTDPGV
Sbjct: 431 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 490

Query: 481 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPEI 525
           PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAK+EFPEE+DRLLD+VPEI
Sbjct: 491 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEI 550

[Close]

BLAST of HG10005825 vs. ExPASy TrEMBL
Match: A0A0A0K6S4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075670 PE=3 SV=1)

HSP 1 Score: 835.1 bits (2156), Expect = 1.6e-238
Identity = 440/552 (79.71%), Postives = 467/552 (84.60%), Query Frame = 0


Query: 1   MEGLILNNPNPSLSKPILLKNPFLHSPSQIRIFCR----RSFSFSVVTCKIKASQDKKQK 60
           ME LILNN NPSLSKP LLK  FLHS    +I  R    RSFS   VTCK KASQDKK K
Sbjct: 11  MERLILNNLNPSLSKPFLLKTSFLHSVFSHQITLRTAQIRSFS---VTCKNKASQDKKLK 70

Query: 61  NVTNKIVLSEAAPPLAEEESDNSGNTEAEVKSGNGNGLAKLVKRLPKRILGALSNLPLAI 120
           N +NKIVLSEAAPPLAEEESD SGN EAEVK GNG+   KLVKRLPKRILGALSNLPLAI
Sbjct: 71  NASNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSRSMKLVKRLPKRILGALSNLPLAI 130

Query: 121 GEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPW-- 180
           GEMFTI+ALMALGTVIDQGEAPDFYFQKYPEDNPLWGFF+WRWILTLGFDHM  S+ +  
Sbjct: 131 GEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFNWRWILTLGFDHMYSSTIFLG 190

Query: 181 ------------------DLTHGMHVHNPDSSCQGCKKV----TIHLLSFSVSKTHILGA 240
                              L       N   S +  +K+     +   S       ++GA
Sbjct: 191 MLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGA 250

Query: 241 GYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVVG 300
           GYEVFIKGP+LYAFKGLAGRFAPIGVHLAMLLIM GATLSATGSFRGSVTVPQGLNFVVG
Sbjct: 251 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVG 310

Query: 301 DVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISVN 360
           DVLNPSGFL+KPTEAFNTEVHVNKFYM+YYDSGE+KQF+SDLSL+DLNGKEVM KTISVN
Sbjct: 311 DVLNPSGFLAKPTEAFNTEVHVNKFYMNYYDSGEIKQFYSDLSLFDLNGKEVMRKTISVN 370

Query: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDV+SPDV
Sbjct: 371 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVNSPDV 430

Query: 421 KGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPGV 480
           KGISMLARDLQSIVL DQEGKFVGVRRPSS+LPIDINGIK EIVDAIGSTGLELKTDPGV
Sbjct: 431 KGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGV 490

Query: 481 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPEI 525
           PIVYAGFGALMLTTCVSYLSHSQ+WAIQDGTVVIVGGKTNRAK+EFPEE+DRLLD+VPEI
Sbjct: 491 PIVYAGFGALMLTTCVSYLSHSQVWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEI 550

[Close]

BLAST of HG10005825 vs. ExPASy TrEMBL
Match: A0A6J1JI27 (cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111485982 PE=3 SV=1)

HSP 1 Score: 828.2 bits (2138), Expect = 2.0e-236
Identity = 438/553 (79.20%), Postives = 467/553 (84.45%), Query Frame = 0


Query: 1   MEGLILNNPNPSLSKPILLKNPFLHSPSQIRI---FCRRSFSFSVVTCKIKASQDKKQKN 60
           MEGLIL+NPNP LS     K PFLHS  + +I    C R+ SFS VTCK+KASQDKK KN
Sbjct: 1   MEGLILHNPNPYLS-----KTPFLHSAFRPQITPNLCCRTLSFS-VTCKVKASQDKKPKN 60

Query: 61  VTNKIVLSEAAPPLAEEESDNSG-NTEAEVKSGNGNGL-AKLVKRLPKRILGALSNLPLA 120
           V+NKIVLSEAAPPLAEE  +N+G NTEAEVKSGNG+GL  KLVKRLPKRILGALSNLPLA
Sbjct: 61  VSNKIVLSEAAPPLAEETDNNNGNNTEAEVKSGNGSGLMMKLVKRLPKRILGALSNLPLA 120

Query: 121 IGEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPW- 180
           IGEMFTI+ALMALGT IDQGEAPDFYFQKYPEDNP+WGFF+WRWILTLGFDHM  S+ + 
Sbjct: 121 IGEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTLGFDHMYTSTIFL 180

Query: 181 -------------------DLTHGMHVHNPDSSCQGCKKV----TIHLLSFSVSKTHILG 240
                               L       N   S    +K+     +   S       ++G
Sbjct: 181 AMLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGDAIRKLECSEILPRASVQDLGVVLMG 240

Query: 241 AGYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVV 300
           AGYEVFIKGP+LYAFKGLAGRFAPIGVHLAMLLIM GATLSA GSFRGSVTVPQGLNFVV
Sbjct: 241 AGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRGSVTVPQGLNFVV 300

Query: 301 GDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISV 360
           GDVLNPSGFLSKPTEAFNTEVHVN FYMDYYDSGEVKQFHSDLSL+DLNGKEVM KTISV
Sbjct: 301 GDVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRKTISV 360

Query: 361 NNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPD 420
           NNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPD
Sbjct: 361 NNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPD 420

Query: 421 VKGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPG 480
           VKGISMLARDLQSIVL DQEGKFVGVRRPSSKLPIDI+G+K EI+DAIGSTGLELKTDPG
Sbjct: 421 VKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAIGSTGLELKTDPG 480

Query: 481 VPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPE 525
           VP+VYAGFGALMLTTC+S+LSHSQIWAIQDGTVVIVGGKTNRAK+EFPEEID LLDRVPE
Sbjct: 481 VPVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEIDSLLDRVPE 540

[Close]

BLAST of HG10005825 vs. ExPASy TrEMBL
Match: A0A6J1EUQ2 (cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437776 PE=3 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 2.2e-235
Identity = 436/553 (78.84%), Postives = 464/553 (83.91%), Query Frame = 0


Query: 1   MEGLILNNPNPSLSKPILLKNPFLHS---PSQIRIFCRRSFSFSVVTCKIKASQDKKQKN 60
           MEGLIL+NPNP LS     K PFLHS   P      C R+ SFS VTCK+KASQDKK KN
Sbjct: 1   MEGLILHNPNPYLS-----KTPFLHSSFRPQITPYLCCRTLSFS-VTCKVKASQDKKPKN 60

Query: 61  VTNKIVLSEAAPPLAEEESDNS-GNTEAEVKSGNGNGL-AKLVKRLPKRILGALSNLPLA 120
           V+N+IVLSEAAPPLAEE  +NS  NTEAEVK GNG+GL  KLVKRLPKRILGALSNLPLA
Sbjct: 61  VSNRIVLSEAAPPLAEETDNNSANNTEAEVKPGNGSGLMMKLVKRLPKRILGALSNLPLA 120

Query: 121 IGEMFTISALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPW- 180
           IGEMFTI+ALMALGT IDQGEAPDFYFQKYPEDNP+WGFF+WRWILTLGFDHM  S+ + 
Sbjct: 121 IGEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTLGFDHMYTSTIFL 180

Query: 181 -------------------DLTHGMHVHNPDSSCQGCKKV----TIHLLSFSVSKTHILG 240
                               L       N   S +  +K+     +   S       ++G
Sbjct: 181 AMLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGEAIRKLECSEILPRASVQDLGVVLMG 240

Query: 241 AGYEVFIKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVV 300
           AGYEVFIKGP+LYAFKGLAGRFAPIGVHLAMLLIM GATLSA GSFRGSVTVPQGLNFVV
Sbjct: 241 AGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRGSVTVPQGLNFVV 300

Query: 301 GDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISV 360
           GDVLNPSGFLSKPTEAFNTEVHVN FYMDYYDSGEVKQFHSDLSL+DLNGKEVM KTISV
Sbjct: 301 GDVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRKTISV 360

Query: 361 NNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPD 420
           NNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPD
Sbjct: 361 NNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPD 420

Query: 421 VKGISMLARDLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPG 480
           VKGISMLARDLQSIVL DQEGKFVGVRRPSSKLPIDI+G+K EI+DAIGSTGLELKTDPG
Sbjct: 421 VKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAIGSTGLELKTDPG 480

Query: 481 VPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPE 525
           VP+VYAGFGALMLTTC+S+LSHSQIWAIQDGTVVIVGGKTNRAK+EFPEEID LLDRVPE
Sbjct: 481 VPVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEIDSLLDRVPE 540

[Close]

BLAST of HG10005825 vs. TAIR 10
Match: AT1G49380.1 (cytochrome c biogenesis protein family )

HSP 1 Score: 640.6 bits (1651), Expect = 1.1e-183
Identity = 340/534 (63.67%), Postives = 404/534 (75.66%), Query Frame = 0


Query: 16  PILLKNPFLHSPSQIRIFCRRSFSFSVVT-CKIKASQDKKQ-----KNVTNKIVLSEAAP 75
           P +L    +H  S+   +  R+ + S++T CK++  QD  Q     +N+T  I LS++AP
Sbjct: 7   PKILHFSKIHPFSRPSSYLCRTRNVSLITNCKLQKPQDGNQRSSSNRNLTKTISLSDSAP 66

Query: 76  PLAEEESDN--SGNTEAEVKSGNGNGLAKLVKRLPKRILGALSNLPLAIGEMFTISALMA 135
           P+ EE  D    G        G+G G    +K LP+++L  LSNLPLAI EMFTI+ALMA
Sbjct: 67  PVTEETGDGIVKGGGNGGGGGGDGRGGLGFLKILPRKVLSVLSNLPLAITEMFTIAALMA 126

Query: 136 LGTVIDQGEAPDFYFQKYPEDNPLWGFFSWRWILTLGFDHMDVSSPWDLTHGMHVHNPDS 195
           LGTVI+QGE PDFYFQKYPEDNP+ GFF+WRWI TLG DHM  S+P  L  GM V    S
Sbjct: 127 LGTVIEQGETPDFYFQKYPEDNPVLGFFTWRWISTLGLDHM-YSAPIFL--GMLVLLAAS 186

Query: 196 -----------------------SCQGCKKV----TIHLLSFSVSKTHILGAGYEVFIKG 255
                                  S +  KK     T+   S       ++G G+EVF+KG
Sbjct: 187 LMACTYTTQIPLVKVARRWSFMKSDEAIKKQEFADTLPRASIQDLGMILMGDGFEVFMKG 246

Query: 256 PSLYAFKGLAGRFAPIGVHLAMLLIMVGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGF 315
           PSLYAFKGLAGRFAPIGVH+AMLLIMVG TLSATGSFRGSVTVPQGLNFV+GDVL P GF
Sbjct: 247 PSLYAFKGLAGRFAPIGVHIAMLLIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLAPIGF 306

Query: 316 LSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLYDLNGKEVMSKTISVNNPLRYGGF 375
            S PT+AFNTEVHVN+F MDYYDSGEV QFHSDLSL DLNGKEV+ KTISVN+PLRYGG 
Sbjct: 307 FSIPTDAFNTEVHVNRFTMDYYDSGEVSQFHSDLSLRDLNGKEVLRKTISVNDPLRYGGV 366

Query: 376 TIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDVKGISMLAR 435
           T+YQTDW FSALQ+ K+ EGPFNLA+AP+KINGDKKLYGTFLPVGD ++P+VKGISMLAR
Sbjct: 367 TVYQTDWSFSALQVTKDGEGPFNLAMAPIKINGDKKLYGTFLPVGDTNAPNVKGISMLAR 426

Query: 436 DLQSIVLSDQEGKFVGVRRPSSKLPIDINGIKFEIVDAIGSTGLELKTDPGVPIVYAGFG 495
           DLQSIV+ D +GKF G+RRPSSKLPI+ING+K  I DAIGSTGLELKTDPGVP+VYAGFG
Sbjct: 427 DLQSIVVYDLDGKFAGIRRPSSKLPIEINGMKIVIEDAIGSTGLELKTDPGVPVVYAGFG 486

Query: 496 ALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKIEFPEEIDRLLDRVPEIIE 515
           ALMLTTC+SYLSHSQIWA+Q+GT ++VGGKTNRAK +FP++++RLLD+VPE+I+
Sbjct: 487 ALMLTTCISYLSHSQIWALQNGTALVVGGKTNRAKNQFPDDMNRLLDQVPELIK 537

The following BLAST results are available for this feature:

BLAST of HG10005825 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889049.1	1.1e-247	81.15	cytochrome c biogenesis protein CCS1, chloroplastic isoform X1 [Benincasa hispid...	[more]
XP_008454876.1	3.9e-242	80.98	PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo]	[more]
KAA0031251.1	3.9e-242	80.98	cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo var. makuwa] >...	[more]
XP_011658930.1	3.4e-238	79.71	cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis sativus] >KGN43987....	[more]
XP_023530089.1	3.2e-236	79.02	cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10005825 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIA4	1.6e-182	63.67	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q75KA9	8.0e-174	62.37	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Oryza sativa subsp. japon...	[more]
Q8GTZ9	3.9e-88	38.92	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Chlamydomonas reinhardtii...	[more]
Q8DL16	6.5e-75	37.24	Cytochrome c biogenesis protein CcsB OS=Thermosynechococcus elongatus (strain BP...	[more]
Q118K5	1.1e-74	36.73	Cytochrome c biogenesis protein CcsB OS=Trichodesmium erythraeum (strain IMS101)...	[more]

BLAST of HG10005825 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5Y2	1.9e-242	80.98	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BZ46	1.9e-242	80.98	cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0K6S4	1.6e-238	79.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075670 PE=3 SV=1	[more]
A0A6J1JI27	2.0e-236	79.20	cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EUQ2	2.2e-235	78.84	cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita moschata OX=366...	[more]

BLAST of HG10005825 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49380.1	1.1e-183	63.67	cytochrome c biogenesis protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007816	ResB-like domain	PFAM	PF05140	ResB	coord: 391..502 e-value: 2.6E-14 score: 52.9 coord: 211..351 e-value: 4.5E-34 score: 118.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..89
IPR023494	Cytochrome c biogenesis protein Ccs1/CcsB/ResB	PANTHER	PTHR31566	CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC	coord: 206..517 coord: 65..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005825.1	HG10005825.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
cellular_component	GO:0016021	integral component of membrane