HG10005767 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005767
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein RADIALIS-like 1
Location	Chr07: 5717592 .. 5717943 (+)
RNA-Seq Expression	HG10005767
Synteny	HG10005767

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTCAATGTCCTCTCATGGGTCAAATAATGCATGGACTGCAATGCAAAACAAGACATTTGAAAGGGCTTTGGCAGTGTATGATCAAGACACTCCTGAAAGATGGCTGAATGTTGCTAAGGCTGTTGGTGAAAAAACTGAAGAGGAAGTCAAGTGGCATTACCAACTTCTTCTTGAAGATGTCAAATGTATTGAGTCTGGCAATGTCCCTTTTCCCTATCCATCCTCTAGTGATCATTTGCCAAGGCAAAGAGGTAATTTATAAGATTTCTTCATCCCTACAACTCTATTATTTGATTATGCTTTTGTTTCTTGTTTCTCGTTTCTTATTTTCAGTTTATGTGAAATAA

mRNA sequence

ATGACTTCAATGTCCTCTCATGGGTCAAATAATGCATGGACTGCAATGCAAAACAAGACATTTGAAAGGGCTTTGGCAGTGTATGATCAAGACACTCCTGAAAGATGGCTGAATGTTGCTAAGGCTGTTGGTGAAAAAACTGAAGAGGAAGTCAAGTGGCATTACCAACTTCTTCTTGAAGATGTCAAATGTATTGAGTCTGGCAATGTCCCTTTTCCCTATCCATCCTCTAGTGATCATTTGCCAAGGCAAAGAGTTTATGTGAAATAA

Coding sequence (CDS)

ATGACTTCAATGTCCTCTCATGGGTCAAATAATGCATGGACTGCAATGCAAAACAAGACATTTGAAAGGGCTTTGGCAGTGTATGATCAAGACACTCCTGAAAGATGGCTGAATGTTGCTAAGGCTGTTGGTGAAAAAACTGAAGAGGAAGTCAAGTGGCATTACCAACTTCTTCTTGAAGATGTCAAATGTATTGAGTCTGGCAATGTCCCTTTTCCCTATCCATCCTCTAGTGATCATTTGCCAAGGCAAAGAGTTTATGTGAAATAA

Protein sequence

MTSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLEDVKCIESGNVPFPYPSSSDHLPRQRVYVK

Homology

[Close]

BLAST of HG10005767 vs. NCBI nr
Match: XP_038888638.1 (protein RADIALIS-like 1 [Benincasa hispida])

HSP 1 Score: 154.8 bits (390), Expect = 3.4e-34
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MTSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLE 60
          M SMSSHGS NAWTAMQNKTFE+ALAVYDQDTPERWLNVAKAVGEKTEEEVK HYQLLL+
Sbjct: 1  MASMSSHGS-NAWTAMQNKTFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLD 60

Query: 61 DVKCIESGNVPFPYPSSSDHLPRQR 86
          DVK IESGNVPFPYPSSSD LPR+R
Sbjct: 61 DVKHIESGNVPFPYPSSSDDLPRKR 84

[Close]

BLAST of HG10005767 vs. NCBI nr
Match: XP_022952273.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511439.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG7011709.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-30
Identity = 72/85 (84.71%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MTSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLE 60
          M SMSS GS NAWT MQNK FE+ALAVYDQDTPERWLNVAKAVGEKTEEEVK HYQLLL 
Sbjct: 1  MASMSSRGS-NAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLH 60

Query: 61 DVKCIESGNVPFPYPSSSDHLPRQR 86
          DVK IESGNVPFPY +SSD LPR+R
Sbjct: 61 DVKHIESGNVPFPYRNSSDDLPRKR 84

[Close]

BLAST of HG10005767 vs. NCBI nr
Match: KAG6572041.1 (Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-30
Identity = 72/85 (84.71%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MTSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLE 60
          M SMSS GS NAWT MQNK FE+ALAVYDQDTPERWLNVAKAVGEKTEEEVK HYQLLL 
Sbjct: 1  MASMSSRGS-NAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLH 60

Query: 61 DVKCIESGNVPFPYPSSSDHLPRQR 86
          DVK IESGNVPFPY +SSD LPR+R
Sbjct: 61 DVKHIESGNVPFPYRNSSDDLPRKR 84

[Close]

BLAST of HG10005767 vs. NCBI nr
Match: XP_008447294.1 (PREDICTED: protein RADIALIS-like 2 [Cucumis melo])

HSP 1 Score: 142.1 bits (357), Expect = 2.3e-30
Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1  MTSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLE 60
          M SMSSHGS NAWT MQNKTFE+ALA YDQDTPERW+NVAKAVGEKTEEEVK HYQLLL 
Sbjct: 1  MASMSSHGS-NAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLH 60

Query: 61 DVKCIESGNVPFPYP--SSSDHLPRQR 86
          DVK IESGNVPFPYP  SS D LPR+R
Sbjct: 61 DVKHIESGNVPFPYPTTSSDDDLPRKR 86

[Close]

BLAST of HG10005767 vs. NCBI nr
Match: XP_011659078.1 (protein RADIALIS-like 2 [Cucumis sativus] >KAE8646141.1 hypothetical protein Csa_015657 [Cucumis sativus])

HSP 1 Score: 142.1 bits (357), Expect = 2.3e-30
Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1  MTSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLE 60
          M SMSSHGS NAWT MQNKTFE ALA YDQDTPERW+NVAKAVGEKTEEEVK HYQLLL 
Sbjct: 1  MASMSSHGS-NAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLH 60

Query: 61 DVKCIESGNVPFPYP--SSSDHLPRQR 86
          DVK IESGNVPFPYP  SS+D LPR+R
Sbjct: 61 DVKHIESGNVPFPYPTTSSNDDLPRKR 86

[Close]

BLAST of HG10005767 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-20
Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 3  SMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLEDV 62
          SMSS+GS  +WT  QNK FERALAVYDQDTP+RW NVA+AVG KT EE K  Y LL+ D+
Sbjct: 5  SMSSYGS-GSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KCIESGNVPFP-YPSSSDHLPRQRV 87
          + IE+G+VPFP Y +++ +  R R+
Sbjct: 65 ESIENGHVPFPDYKTTTGNSNRGRL 88

[Close]

BLAST of HG10005767 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-20
Identity = 48/72 (66.67%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 2  TSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLED 61
          +SMSS  S+ +WTA QNK FE+ALA YDQDTP RW NVAK VG KT EEVK HY+LL++D
Sbjct: 4  SSMSSQ-SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQD 63

Query: 62 VKCIESGNVPFP 74
          +  IE+G+VPFP
Sbjct: 64 INSIENGHVPFP 74

[Close]

BLAST of HG10005767 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-20
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 5  SSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLEDVKC 64
          S+ GS   W+A +NK FERALAVYD+DTP+RW NVA+AV  +T EEVK HY++L+ED+K 
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IESGNVPFP 74
          IESG VPFP
Sbjct: 63 IESGKVPFP 71

[Close]

BLAST of HG10005767 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.6e-18
Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 5  SSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLEDVKC 64
          SS  S+++WT+ QNK FERALAVYD+DTP+RW NVAKAVG K+ EEVK HY +L+ED+  
Sbjct: 4  SSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMN 63

Query: 65 IESGNVPFP 74
          IE   VP P
Sbjct: 64 IEQDLVPLP 72

[Close]

BLAST of HG10005767 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-18
Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 5  SSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLEDVKC 64
          +S  S + WT  QNK FERALAVYD+DTP+RW NVAKAVG KT EEVK HY +L+ED+  
Sbjct: 4  NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLIN 63

Query: 65 IESGNVPFP 74
          IE+G VP P
Sbjct: 64 IETGRVPLP 72

[Close]

BLAST of HG10005767 vs. ExPASy TrEMBL
Match: A0A6J1GK35 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455002 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.4e-31
Identity = 72/85 (84.71%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MTSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLE 60
          M SMSS GS NAWT MQNK FE+ALAVYDQDTPERWLNVAKAVGEKTEEEVK HYQLLL 
Sbjct: 1  MASMSSRGS-NAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLH 60

Query: 61 DVKCIESGNVPFPYPSSSDHLPRQR 86
          DVK IESGNVPFPY +SSD LPR+R
Sbjct: 61 DVKHIESGNVPFPYRNSSDDLPRKR 84

[Close]

BLAST of HG10005767 vs. ExPASy TrEMBL
Match: A0A5D3D8F6 (Protein RADIALIS-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold214G00200 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1  MTSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLE 60
          M SMSSHGS NAWT MQNKTFE+ALA YDQDTPERW+NVAKAVGEKTEEEVK HYQLLL 
Sbjct: 1  MASMSSHGS-NAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLH 60

Query: 61 DVKCIESGNVPFPYP--SSSDHLPRQR 86
          DVK IESGNVPFPYP  SS D LPR+R
Sbjct: 61 DVKHIESGNVPFPYPTTSSDDDLPRKR 86

[Close]

BLAST of HG10005767 vs. ExPASy TrEMBL
Match: A0A1S3BHZ4 (protein RADIALIS-like 2 OS=Cucumis melo OX=3656 GN=LOC103489762 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1  MTSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLE 60
          M SMSSHGS NAWT MQNKTFE+ALA YDQDTPERW+NVAKAVGEKTEEEVK HYQLLL 
Sbjct: 1  MASMSSHGS-NAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLH 60

Query: 61 DVKCIESGNVPFPYP--SSSDHLPRQR 86
          DVK IESGNVPFPYP  SS D LPR+R
Sbjct: 61 DVKHIESGNVPFPYPTTSSDDDLPRKR 86

[Close]

BLAST of HG10005767 vs. ExPASy TrEMBL
Match: A0A6J1I517 (protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471073 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.5e-30
Identity = 71/85 (83.53%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 1  MTSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLE 60
          M SMSS GS NAWT MQNK FE+ALAVYDQDTPERWLNVAK VGEKTEEEVK HYQLLL 
Sbjct: 1  MASMSSRGS-NAWTPMQNKAFEKALAVYDQDTPERWLNVAKVVGEKTEEEVKRHYQLLLH 60

Query: 61 DVKCIESGNVPFPYPSSSDHLPRQR 86
          DVK IESGNVPFPY +SSD LPR+R
Sbjct: 61 DVKHIESGNVPFPYRNSSDDLPRKR 84

[Close]

BLAST of HG10005767 vs. ExPASy TrEMBL
Match: A0A6J1C6U4 (protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007913 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-27
Identity = 66/79 (83.54%), Postives = 71/79 (89.87%), Query Frame = 0


Query: 1  MTSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLE 60
          M SMSS GS +AWTAMQNK FE ALAVYDQDTPERWLNVAKAVGEKTEEEVK HYQLL+E
Sbjct: 1  MASMSSRGS-SAWTAMQNKAFEEALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLVE 60

Query: 61 DVKCIESGNVPFPYPSSSD 80
          DVK IESG+VPFPY +S+D
Sbjct: 61 DVKHIESGHVPFPYQTSND 78

[Close]

BLAST of HG10005767 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 7.1e-22
Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 3  SMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLEDV 62
          SMSS+GS  +WT  QNK FERALAVYDQDTP+RW NVA+AVG KT EE K  Y LL+ D+
Sbjct: 5  SMSSYGS-GSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KCIESGNVPFP-YPSSSDHLPRQRV 87
          + IE+G+VPFP Y +++ +  R R+
Sbjct: 65 ESIENGHVPFPDYKTTTGNSNRGRL 88

[Close]

BLAST of HG10005767 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 100.1 bits (248), Expect = 9.2e-22
Identity = 48/72 (66.67%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 2  TSMSSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLED 61
          +SMSS  S+ +WTA QNK FE+ALA YDQDTP RW NVAK VG KT EEVK HY+LL++D
Sbjct: 4  SSMSSQ-SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQD 63

Query: 62 VKCIESGNVPFP 74
          +  IE+G+VPFP
Sbjct: 64 INSIENGHVPFP 74

[Close]

BLAST of HG10005767 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-19
Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 5  SSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLEDVKC 64
          SS  S+++WT+ QNK FERALAVYD+DTP+RW NVAKAVG K+ EEVK HY +L+ED+  
Sbjct: 4  SSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMN 63

Query: 65 IESGNVPFP 74
          IE   VP P
Sbjct: 64 IEQDLVPLP 72

[Close]

BLAST of HG10005767 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-19
Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 5  SSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLEDVKC 64
          +S  S + WT  QNK FERALAVYD+DTP+RW NVAKAVG KT EEVK HY +L+ED+  
Sbjct: 4  NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLIN 63

Query: 65 IESGNVPFP 74
          IE+G VP P
Sbjct: 64 IETGRVPLP 72

[Close]

BLAST of HG10005767 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-19
Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 5  SSHGSNNAWTAMQNKTFERALAVYDQDTPERWLNVAKAVGEKTEEEVKWHYQLLLEDVKC 64
          +S  S + WT  QNK FERALAVYD+DTP+RW NVAKAVG KT EEVK HY +L+ED+  
Sbjct: 4  NSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLIN 63

Query: 65 IESGNVPFP 74
          IE+G VP P
Sbjct: 64 IETGRVPLP 72

The following BLAST results are available for this feature:

BLAST of HG10005767 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888638.1	3.4e-34	90.59	protein RADIALIS-like 1 [Benincasa hispida]	[more]
XP_022952273.1	1.7e-30	84.71	protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511439.1 protein RADIALIS-li...	[more]
KAG6572041.1	1.7e-30	84.71	Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008447294.1	2.3e-30	83.91	PREDICTED: protein RADIALIS-like 2 [Cucumis melo]	[more]
XP_011659078.1	2.3e-30	83.91	protein RADIALIS-like 2 [Cucumis sativus] >KAE8646141.1 hypothetical protein Csa...	[more]

BLAST of HG10005767 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIJ5	1.0e-20	60.00	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
F4JVB8	1.3e-20	66.67	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q58FS3	1.3e-20	65.22	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
Q8GW75	1.6e-18	63.77	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]
Q1A173	2.1e-18	65.22	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]

BLAST of HG10005767 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GK35	8.4e-31	84.71	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455002 PE=4 SV=1	[more]
A0A5D3D8F6	1.1e-30	83.91	Protein RADIALIS-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BHZ4	1.1e-30	83.91	protein RADIALIS-like 2 OS=Cucumis melo OX=3656 GN=LOC103489762 PE=4 SV=1	[more]
A0A6J1I517	2.5e-30	83.53	protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471073 PE=4 SV=1	[more]
A0A6J1C6U4	1.5e-27	83.54	protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007913 PE=4 SV=1	[more]

BLAST of HG10005767 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21650.1	7.1e-22	60.00	Homeodomain-like superfamily protein	[more]
AT4G39250.1	9.2e-22	66.67	RAD-like 1	[more]
AT1G19510.1	1.1e-19	63.77	RAD-like 5	[more]
AT1G75250.1	1.5e-19	65.22	RAD-like 6	[more]
AT1G75250.2	1.5e-19	65.22	RAD-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 9..61 e-value: 6.7E-4 score: 29.0
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..59 e-value: 4.25918E-4 score: 32.9326
None	No IPR available	GENE3D	1.10.10.60		coord: 3..72 e-value: 2.9E-20 score: 73.8
None	No IPR available	PANTHER	PTHR43952:SF74	PROTEIN RADIALIS-LIKE 2	coord: 4..74
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 4..74
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005767.1	HG10005767.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity