Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTCCAATATGCATGTAAGTTATCTTTAAATGTTTATTCACATAGAAATTAAAAATCTTATATTTATATATAATATCATCTCAATGTTCTATTTTTTAGGATTTGGATAAGCAAAGAACTGAACCAAACAAGGGTAAGAAGTCAAAAAGACCTCGTACTACAATACCGACATTTGAACGACGACAATCTGATCGCACCTTGGTGAAAACGTCTTGGAGATTTGCAAAGTCGTTTAGTATGGACTTAACCAATATGGCCAGTGACGAGGAGGAGGATGAGGACCAAGCTGCTTGTTCAAAAAATGTAAAAAGGAAGATAGCAAATGAACTAGATAATGTTGTGAAGGCTAGTGTAGAGAGAGAGGTTATGGAAAAATCTCTTTTTTCTGACTCACTTCACCACAACAATAGGGATCCTTCACTGTTACTACTCCACTTCATTCACGTGTCAATGAAATTGTTTGTCCCGAGCCAAAAAGACCACAAATTAACCCATTAGATTCCCCTGCTACTTGTATTAGATCAGCAATGCGTAAATTAATCACAGAAGATGCCCAAAATTGTTTGGAGGAAAATGTAGTTGAAGTTAATAATACCAAGGAATCGGGCCCCAAAAAGACAAGAGGTAAGATGAAAATGCAAACAATAGCAATGGAGCCAGAAATGAGATTAAATGTAACCTTCAATGAATACGAACAACCTGTTGGAGAAACGTCGGTTGGGTTAGCCTCATTTTTGGGGTCACTGGTTAGAGAAGTGGTGCCTGCGACTATTGAAACTTGGAAGAAACTTTCAACGAGACAAAAAGAAGTACTGTGGCATTCTATTCGAGTATGTAGAAAATAA
mRNA sequence
ATGAAGTCCAATATGCATGATTTGGATAAGCAAAGAACTGAACCAAACAAGGGTAAGAAGTCAAAAAGACCTCGTACTACAATACCGACATTTGAACGACGACAATCTGATCGCACCTTGGTGAAAACGTCTTGGAGATTTGCAAAGTCGTTTAGTATGGACTTAACCAATATGGCCAGTGACGAGGAGGAGGATGAGGACCAAGCTGCTTGTTCAAAAAATGTAAAAAGGAAGATAGCAAATGAACTAGATAATGTTGTGAAGGCTAGTGTAGAGAGAGAGGGATCCTTCACTGTTACTACTCCACTTCATTCACGTGTCAATGAAATTGTTTGTCCCGAGCCAAAAAGACCACAAATTAACCCATTAGATTCCCCTGCTACTTGTATTAGATCAGCAATGCGTAAATTAATCACAGAAGATGCCCAAAATTGTTTGGAGGAAAATGTAGTTGAAGTTAATAATACCAAGGAATCGGGCCCCAAAAAGACAAGAGGTAAGATGAAAATGCAAACAATAGCAATGGAGCCAGAAATGAGATTAAATGTAACCTTCAATGAATACGAACAACCTGTTGGAGAAACGTCGGTTGGGTTAGCCTCATTTTTGGGGTCACTGGTTAGAGAAGTGGTGCCTGCGACTATTGAAACTTGGAAGAAACTTTCAACGAGACAAAAAGAAGTACTGTGGCATTCTATTCGAGTATGTAGAAAATAA
Coding sequence (CDS)
ATGAAGTCCAATATGCATGATTTGGATAAGCAAAGAACTGAACCAAACAAGGGTAAGAAGTCAAAAAGACCTCGTACTACAATACCGACATTTGAACGACGACAATCTGATCGCACCTTGGTGAAAACGTCTTGGAGATTTGCAAAGTCGTTTAGTATGGACTTAACCAATATGGCCAGTGACGAGGAGGAGGATGAGGACCAAGCTGCTTGTTCAAAAAATGTAAAAAGGAAGATAGCAAATGAACTAGATAATGTTGTGAAGGCTAGTGTAGAGAGAGAGGGATCCTTCACTGTTACTACTCCACTTCATTCACGTGTCAATGAAATTGTTTGTCCCGAGCCAAAAAGACCACAAATTAACCCATTAGATTCCCCTGCTACTTGTATTAGATCAGCAATGCGTAAATTAATCACAGAAGATGCCCAAAATTGTTTGGAGGAAAATGTAGTTGAAGTTAATAATACCAAGGAATCGGGCCCCAAAAAGACAAGAGGTAAGATGAAAATGCAAACAATAGCAATGGAGCCAGAAATGAGATTAAATGTAACCTTCAATGAATACGAACAACCTGTTGGAGAAACGTCGGTTGGGTTAGCCTCATTTTTGGGGTCACTGGTTAGAGAAGTGGTGCCTGCGACTATTGAAACTTGGAAGAAACTTTCAACGAGACAAAAAGAAGTACTGTGGCATTCTATTCGAGTATGTAGAAAATAA
Protein sequence
MKSNMHDLDKQRTEPNKGKKSKRPRTTIPTFERRQSDRTLVKTSWRFAKSFSMDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREGSFTVTTPLHSRVNEIVCPEPKRPQINPLDSPATCIRSAMRKLITEDAQNCLEENVVEVNNTKESGPKKTRGKMKMQTIAMEPEMRLNVTFNEYEQPVGETSVGLASFLGSLVREVVPATIETWKKLSTRQKEVLWHSIRVCRK
Homology
BLAST of HG10005753 vs. NCBI nr
Match:
KAA0041269.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 177.2 bits (448), Expect = 1.7e-40
Identity = 102/186 (54.84%), Postives = 129/186 (69.35%), Query Frame = 0
Query: 53 MDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREGSFTVTTPL-HSRVNEIV 112
MDLT ++D+EE+E +A +++ K E + E TTPL S VN +
Sbjct: 1 MDLTQPSTDDEENEGEAL---HLREKEIRETSPLPDPLPEE-----ATTPLPSSHVNATI 60
Query: 113 CPEPKRPQINPLDSPATCIRSAMRKLITEDAQNCLEENV---VEVNNTKESGPKKTRGKM 172
P+ KRP PLDSPA C RSA+RKL E+ ++ LEEN E +TKE PKKTRG+
Sbjct: 61 HPQSKRPPNRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRT 120
Query: 173 KMQTIAMEPEMRLNVTFNEYEQPVGETSVGLASFLGSLVREVVPATIETWKKLSTRQKEV 232
KMQTIAMEPEM+L++ +N Y QP+GETSVGL+SFLG+LVREVVP IETWKK+STRQKE+
Sbjct: 121 KMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNIETWKKISTRQKEI 178
Query: 233 LWHSIR 235
LWHSI+
Sbjct: 181 LWHSIQ 178
BLAST of HG10005753 vs. NCBI nr
Match:
KAA0053956.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 172.2 bits (435), Expect = 5.5e-39
Identity = 101/187 (54.01%), Postives = 129/187 (68.98%), Query Frame = 0
Query: 53 MDLTNMASDEEEDEDQAACSKNVK-RKIANELDNVVKASVEREGSFTVTTPL-HSRVNEI 112
MDLT ++D+EE+E +A + + R+ + LD + S TTPL S VN
Sbjct: 1 MDLTQSSTDDEENEGEALLLREKEIRETSPLLDPL---------SEEATTPLPSSHVNAT 60
Query: 113 VCPEPKRPQINPLDSPATCIRSAMRKLITEDAQNCLEENV---VEVNNTKESGPKKTRGK 172
+ P+ +RP PLDSPA RSA+RKL E ++ LEEN E +TKE PKKTRG
Sbjct: 61 IHPQSRRPPNRPLDSPAGRTRSAVRKLPVEKVESQLEENENVDCEEVHTKEPSPKKTRGH 120
Query: 173 MKMQTIAMEPEMRLNVTFNEYEQPVGETSVGLASFLGSLVREVVPATIETWKKLSTRQKE 232
MKMQTIAMEPEM+L++ +N Y QP+GETSVGL+SFLG+LVREVVP +ETWKK+STRQKE
Sbjct: 121 MKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKE 178
Query: 233 VLWHSIR 235
+LWHSI+
Sbjct: 181 ILWHSIQ 178
BLAST of HG10005753 vs. NCBI nr
Match:
KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 171.0 bits (432), Expect = 1.2e-38
Identity = 99/186 (53.23%), Postives = 128/186 (68.82%), Query Frame = 0
Query: 53 MDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREGSFTVTTPL-HSRVNEIV 112
MDLT ++D+EE+E +A +++ K E + E TTPL S VN +
Sbjct: 1 MDLTQPSTDDEENEGEAL---HLREKEIRETSPLPDPLPEE-----ATTPLPSSHVNATI 60
Query: 113 CPEPKRPQINPLDSPATCIRSAMRKLITEDAQNCLEENV---VEVNNTKESGPKKTRGKM 172
P+ +RP PLDSPA RSA+RKL E+ ++ LEEN E +TKE PKKTRG+
Sbjct: 61 HPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRT 120
Query: 173 KMQTIAMEPEMRLNVTFNEYEQPVGETSVGLASFLGSLVREVVPATIETWKKLSTRQKEV 232
KMQTIAMEPEM+L++ +N Y QP+GETSVGL+SFLG+LVREVVP +ETWKK+STRQKE+
Sbjct: 121 KMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEI 178
Query: 233 LWHSIR 235
LWHSI+
Sbjct: 181 LWHSIQ 178
BLAST of HG10005753 vs. NCBI nr
Match:
KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 171.0 bits (432), Expect = 1.2e-38
Identity = 99/186 (53.23%), Postives = 128/186 (68.82%), Query Frame = 0
Query: 53 MDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREGSFTVTTPL-HSRVNEIV 112
MDLT ++D+EE+E +A +++ K E + E TTPL S VN +
Sbjct: 1 MDLTQPSTDDEENEGEAL---HLREKEIRETSPLPDPLPEE-----ATTPLPSSHVNATI 60
Query: 113 CPEPKRPQINPLDSPATCIRSAMRKLITEDAQNCLEENV---VEVNNTKESGPKKTRGKM 172
P+ +RP PLDSPA RSA+RKL E+ ++ LEEN E +TKE PKKTRG+
Sbjct: 61 HPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRT 120
Query: 173 KMQTIAMEPEMRLNVTFNEYEQPVGETSVGLASFLGSLVREVVPATIETWKKLSTRQKEV 232
KMQTIAMEPEM+L++ +N Y QP+GETSVGL+SFLG+LVREVVP +ETWKK+STRQKE+
Sbjct: 121 KMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEI 178
Query: 233 LWHSIR 235
LWHSI+
Sbjct: 181 LWHSIQ 178
BLAST of HG10005753 vs. NCBI nr
Match:
KAA0056267.1 (uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa])
HSP 1 Score: 170.2 bits (430), Expect = 2.1e-38
Identity = 97/187 (51.87%), Postives = 129/187 (68.98%), Query Frame = 0
Query: 53 MDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREGSFTVTTPL-HSRVNEIV 112
MDLT ++D+EE+E +A +++ K E + +E TTPL S VN +
Sbjct: 1 MDLTQPSTDDEENEGEAL---HLREKEIRETSPLPDPLLEE-----ATTPLPSSHVNATI 60
Query: 113 CPEPKRPQINPLDSPATCIRSAMRKLITEDAQNCLEENV---VEVNNTKESGPKKTRGKM 172
P+ +RP PLDSPA RSA+RKL+ E+ ++ LEEN E +TKE PKKTRG+
Sbjct: 61 HPQSRRPPNRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDCEEVHTKEPSPKKTRGRT 120
Query: 173 KMQTIAMEPEMRLNVTFNEYEQPVGETSVGLASFLGSLVREVVPATIETWKKLSTRQKEV 232
KMQTIAMEPEM+L++ +N Y QP+GETSVGL+SFLG+L REVVP + TWKK+STRQKE+
Sbjct: 121 KMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVVPVNVATWKKISTRQKEI 179
Query: 233 LWHSIRV 236
LWHSI++
Sbjct: 181 LWHSIQM 179
BLAST of HG10005753 vs. ExPASy TrEMBL
Match:
A0A5A7TIU1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002550 PE=4 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 8.3e-41
Identity = 102/186 (54.84%), Postives = 129/186 (69.35%), Query Frame = 0
Query: 53 MDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREGSFTVTTPL-HSRVNEIV 112
MDLT ++D+EE+E +A +++ K E + E TTPL S VN +
Sbjct: 1 MDLTQPSTDDEENEGEAL---HLREKEIRETSPLPDPLPEE-----ATTPLPSSHVNATI 60
Query: 113 CPEPKRPQINPLDSPATCIRSAMRKLITEDAQNCLEENV---VEVNNTKESGPKKTRGKM 172
P+ KRP PLDSPA C RSA+RKL E+ ++ LEEN E +TKE PKKTRG+
Sbjct: 61 HPQSKRPPNRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRT 120
Query: 173 KMQTIAMEPEMRLNVTFNEYEQPVGETSVGLASFLGSLVREVVPATIETWKKLSTRQKEV 232
KMQTIAMEPEM+L++ +N Y QP+GETSVGL+SFLG+LVREVVP IETWKK+STRQKE+
Sbjct: 121 KMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNIETWKKISTRQKEI 178
Query: 233 LWHSIR 235
LWHSI+
Sbjct: 181 LWHSIQ 178
BLAST of HG10005753 vs. ExPASy TrEMBL
Match:
A0A5A7UI65 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11091G00020 PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 2.7e-39
Identity = 101/187 (54.01%), Postives = 129/187 (68.98%), Query Frame = 0
Query: 53 MDLTNMASDEEEDEDQAACSKNVK-RKIANELDNVVKASVEREGSFTVTTPL-HSRVNEI 112
MDLT ++D+EE+E +A + + R+ + LD + S TTPL S VN
Sbjct: 1 MDLTQSSTDDEENEGEALLLREKEIRETSPLLDPL---------SEEATTPLPSSHVNAT 60
Query: 113 VCPEPKRPQINPLDSPATCIRSAMRKLITEDAQNCLEENV---VEVNNTKESGPKKTRGK 172
+ P+ +RP PLDSPA RSA+RKL E ++ LEEN E +TKE PKKTRG
Sbjct: 61 IHPQSRRPPNRPLDSPAGRTRSAVRKLPVEKVESQLEENENVDCEEVHTKEPSPKKTRGH 120
Query: 173 MKMQTIAMEPEMRLNVTFNEYEQPVGETSVGLASFLGSLVREVVPATIETWKKLSTRQKE 232
MKMQTIAMEPEM+L++ +N Y QP+GETSVGL+SFLG+LVREVVP +ETWKK+STRQKE
Sbjct: 121 MKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKE 178
Query: 233 VLWHSIR 235
+LWHSI+
Sbjct: 181 ILWHSIQ 178
BLAST of HG10005753 vs. ExPASy TrEMBL
Match:
A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)
HSP 1 Score: 171.0 bits (432), Expect = 5.9e-39
Identity = 99/186 (53.23%), Postives = 128/186 (68.82%), Query Frame = 0
Query: 53 MDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREGSFTVTTPL-HSRVNEIV 112
MDLT ++D+EE+E +A +++ K E + E TTPL S VN +
Sbjct: 1 MDLTQPSTDDEENEGEAL---HLREKEIRETSPLPDPLPEE-----ATTPLPSSHVNATI 60
Query: 113 CPEPKRPQINPLDSPATCIRSAMRKLITEDAQNCLEENV---VEVNNTKESGPKKTRGKM 172
P+ +RP PLDSPA RSA+RKL E+ ++ LEEN E +TKE PKKTRG+
Sbjct: 61 HPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRT 120
Query: 173 KMQTIAMEPEMRLNVTFNEYEQPVGETSVGLASFLGSLVREVVPATIETWKKLSTRQKEV 232
KMQTIAMEPEM+L++ +N Y QP+GETSVGL+SFLG+LVREVVP +ETWKK+STRQKE+
Sbjct: 121 KMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEI 178
Query: 233 LWHSIR 235
LWHSI+
Sbjct: 181 LWHSIQ 178
BLAST of HG10005753 vs. ExPASy TrEMBL
Match:
A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)
HSP 1 Score: 171.0 bits (432), Expect = 5.9e-39
Identity = 99/186 (53.23%), Postives = 128/186 (68.82%), Query Frame = 0
Query: 53 MDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREGSFTVTTPL-HSRVNEIV 112
MDLT ++D+EE+E +A +++ K E + E TTPL S VN +
Sbjct: 1 MDLTQPSTDDEENEGEAL---HLREKEIRETSPLPDPLPEE-----ATTPLPSSHVNATI 60
Query: 113 CPEPKRPQINPLDSPATCIRSAMRKLITEDAQNCLEENV---VEVNNTKESGPKKTRGKM 172
P+ +RP PLDSPA RSA+RKL E+ ++ LEEN E +TKE PKKTRG+
Sbjct: 61 HPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRT 120
Query: 173 KMQTIAMEPEMRLNVTFNEYEQPVGETSVGLASFLGSLVREVVPATIETWKKLSTRQKEV 232
KMQTIAMEPEM+L++ +N Y QP+GETSVGL+SFLG+LVREVVP +ETWKK+STRQKE+
Sbjct: 121 KMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEI 178
Query: 233 LWHSIR 235
LWHSI+
Sbjct: 181 LWHSIQ 178
BLAST of HG10005753 vs. ExPASy TrEMBL
Match:
A0A5A7UNU1 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00350 PE=4 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 1.0e-38
Identity = 97/187 (51.87%), Postives = 129/187 (68.98%), Query Frame = 0
Query: 53 MDLTNMASDEEEDEDQAACSKNVKRKIANELDNVVKASVEREGSFTVTTPL-HSRVNEIV 112
MDLT ++D+EE+E +A +++ K E + +E TTPL S VN +
Sbjct: 1 MDLTQPSTDDEENEGEAL---HLREKEIRETSPLPDPLLEE-----ATTPLPSSHVNATI 60
Query: 113 CPEPKRPQINPLDSPATCIRSAMRKLITEDAQNCLEENV---VEVNNTKESGPKKTRGKM 172
P+ +RP PLDSPA RSA+RKL+ E+ ++ LEEN E +TKE PKKTRG+
Sbjct: 61 HPQSRRPPNRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDCEEVHTKEPSPKKTRGRT 120
Query: 173 KMQTIAMEPEMRLNVTFNEYEQPVGETSVGLASFLGSLVREVVPATIETWKKLSTRQKEV 232
KMQTIAMEPEM+L++ +N Y QP+GETSVGL+SFLG+L REVVP + TWKK+STRQKE+
Sbjct: 121 KMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVVPVNVATWKKISTRQKEI 179
Query: 233 LWHSIRV 236
LWHSI++
Sbjct: 181 LWHSIQM 179
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TIU1 | 8.3e-41 | 54.84 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00... | [more] |
A0A5A7UI65 | 2.7e-39 | 54.01 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11091G... | [more] |
A0A5A7UBP2 | 5.9e-39 | 53.23 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0... | [more] |
A0A5A7SRN7 | 5.9e-39 | 53.23 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00... | [more] |
A0A5A7UNU1 | 1.0e-38 | 51.87 | Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
Match Name | E-value | Identity | Description | |