
HG10005694 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATTACAACACCAACCAAAAGATATTGCTTGTGGGAGAGGGAGACTTCTCCTTTTCAGCTTGCTTGGCTAAAGCCTTTGGCTCTGCTTCTAACATCTTTGCTACTTCTCTTGATTCTAAAGGTATATCATGCTCGTTTGGTAACGATTTCATTTTTAGTTGTCTCTTGTTTTTTTCTCCATGTTTTGTACTATGGCTAACATTTGAATTCTTAGTCAAATTTAAGAAACAAAAACAAGTATTTTTCTACGTCTTATGTGATAATCATTTGATTTTTAGTTTATAGTTAAGCATTCTACTTAGACCTACGAGTCGCTCTGTTATGTAATCTAAGTTTGTATATATATATTTTTTTAAAAAAAAGTAGTTTTTCAACATTATTTATGTTTTTGGAATTTGGCTAAGAAATCATATGTTGAAAATCATTCTAAAGATTTGATGTGAAAACAAGCACGGATTTTTAAAAAAACTAAGACTCTGTTTGATAACGGATTTATTTTTAGTTTATGTGTTTTTTAAATTTATGCTTATTTTCTCCAAATTTCTTTATTATGGTTTTCACTTATTTTAAAGAAACACTTGAATTCTTAATCGTTCTAAAAACAAAAATAAAATCTTCAAAACTACCTTCTTTTTTATTTTCAAAGCCTAGCTTGGTTTTTAAAAAATCGAGTAGAACGTGAATAACTAAACATAAAAACTTATAGGTGAAATTTTGGCTTGGTTTTTGAAAACATTGGTATAAAATATTTATAGGTGAAAGTAGTATTTATAAGTTTAATTTTGAAGAACAAAAAACTAAAATGGTTATCAAACCGCTATCATTTTCTCTAGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAACTTAATTGTTGGCGTTGTTGGATATGCAAACTAAACCTAGAGTCACTAATGAGGAAGTATGCACATGTTGAGAGAAACTTGAAAGACTTAGAGGACCTTGGTTGTACTGTTTTGTATGGAGTGGATGCAAGAACAATGAGCCACCATCCACTTCTTTGCCTCAAGTTATTTGATCGGATCGTCTTCAACTTTTCACATGCGGGTTTTTACTTTGGAGGAGAGAAAAATGTGATTTAAATCATGTGAGTTTTGTTTGATAACGATTTCGTTTTTAGTTTTCATTTTTTTTATATGCTTGGAGGGGGGGGGGGAGGTGTTAGTTTTTAATATTGATGATAGTTTAACTTCAATGGCTTTGTATTTGATAGGCTTCACAGGGATGTGGTGAGAGGATTTTTGAGTAATGCAAAGGAAATGGTGGCTGAAAATGGTGAAATTCACATTACCCACAAGACCTCATATCCTTACAATGAATGGAAGATTGAGAAACTAGCAGCAGAGGTAGGTCTCGTTCGGATCGGGTGGGCGTATTTTTGTAAAGAGGACTATTCAGGTTATGAAAATAAGAGAGGTGCCGGGACAGATAGCGATGCAGCATTCCTCATTGGATCATGCAGCACGTTCAAGTTTGCAAGGACTTTTCTATACAATGTTACATCCTTTCAACTATAA ATGCATTACAACACCAACCAAAAGATATTGCTTGTGGGAGAGGGAGACTTCTCCTTTTCAGCTTGCTTGGCTAAAGCCTTTGGCTCTGCTTCTAACATCTTTGCTACTTCTCTTGATTCTAAAGAGTCACTAATGAGGAAGTATGCACATGTTGAGAGAAACTTGAAAGACTTAGAGGACCTTGGTTGTACTGTTTTGCTTCACAGGGATGTGGTGAGAGGATTTTTGAGTAATGCAAAGGAAATGGTGGCTGAAAATGGTGAAATTCACATTACCCACAAGACCTCATATCCTTACAATGAATGGAAGATTGAGAAACTAGCAGCAGAGGTAGGTCTCGTTCGGATCGGGTGGGCGTATTTTTGTAAAGAGGACTATTCAGGTTATGAAAATAAGAGAGGTGCCGGGACAGATAGCGATGCAGCATTCCTCATTGGATCATGCAGCACGTTCAAGTTTGCAAGGACTTTTCTATACAATGTTACATCCTTTCAACTATAA ATGCATTACAACACCAACCAAAAGATATTGCTTGTGGGAGAGGGAGACTTCTCCTTTTCAGCTTGCTTGGCTAAAGCCTTTGGCTCTGCTTCTAACATCTTTGCTACTTCTCTTGATTCTAAAGAGTCACTAATGAGGAAGTATGCACATGTTGAGAGAAACTTGAAAGACTTAGAGGACCTTGGTTGTACTGTTTTGCTTCACAGGGATGTGGTGAGAGGATTTTTGAGTAATGCAAAGGAAATGGTGGCTGAAAATGGTGAAATTCACATTACCCACAAGACCTCATATCCTTACAATGAATGGAAGATTGAGAAACTAGCAGCAGAGGTAGGTCTCGTTCGGATCGGGTGGGCGTATTTTTGTAAAGAGGACTATTCAGGTTATGAAAATAAGAGAGGTGCCGGGACAGATAGCGATGCAGCATTCCTCATTGGATCATGCAGCACGTTCAAGTTTGCAAGGACTTTTCTATACAATGTTACATCCTTTCAACTATAA MHYNTNQKILLVGEGDFSFSACLAKAFGSASNIFATSLDSKESLMRKYAHVERNLKDLEDLGCTVLLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRIGWAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTFKFARTFLYNVTSFQL Homology
BLAST of HG10005694 vs. NCBI nr
Match: XP_022135928.1 (uncharacterized protein At4g26485-like [Momordica charantia]) HSP 1 Score: 226.1 bits (575), Expect = 2.2e-55 Identity = 122/215 (56.74%), Postives = 138/215 (64.19%), Query Frame = 0
BLAST of HG10005694 vs. NCBI nr
Match: XP_028081873.1 (uncharacterized protein At4g26485 [Camellia sinensis]) HSP 1 Score: 189.5 bits (480), Expect = 2.3e-44 Identity = 97/196 (49.49%), Postives = 125/196 (63.78%), Query Frame = 0
BLAST of HG10005694 vs. NCBI nr
Match: XP_022139692.1 (uncharacterized protein At4g26485-like [Momordica charantia]) HSP 1 Score: 181.8 bits (460), Expect = 4.8e-42 Identity = 95/183 (51.91%), Postives = 116/183 (63.39%), Query Frame = 0
BLAST of HG10005694 vs. NCBI nr
Match: CAB4276993.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 180.6 bits (457), Expect = 1.1e-41 Identity = 98/188 (52.13%), Postives = 118/188 (62.77%), Query Frame = 0
BLAST of HG10005694 vs. NCBI nr
Match: XP_002523255.2 (uncharacterized protein At4g26485 [Ricinus communis]) HSP 1 Score: 180.6 bits (457), Expect = 1.1e-41 Identity = 94/195 (48.21%), Postives = 119/195 (61.03%), Query Frame = 0
BLAST of HG10005694 vs. ExPASy Swiss-Prot
Match: F4I1X0 (Heavy metal-associated isoprenylated plant protein 41 OS=Arabidopsis thaliana OX=3702 GN=HIPP41 PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.3e-34 Identity = 81/194 (41.75%), Postives = 105/194 (54.12%), Query Frame = 0
BLAST of HG10005694 vs. ExPASy Swiss-Prot
Match: P0C8L4 (Uncharacterized protein At4g26485 OS=Arabidopsis thaliana OX=3702 GN=At4g26485 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.5e-33 Identity = 82/200 (41.00%), Postives = 107/200 (53.50%), Query Frame = 0
BLAST of HG10005694 vs. ExPASy Swiss-Prot
Match: O94480 (25S rRNA (uridine-N(3))-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bmt5 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07 Identity = 44/176 (25.00%), Postives = 72/176 (40.91%), Query Frame = 0
BLAST of HG10005694 vs. ExPASy Swiss-Prot
Match: Q3UY23 (Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog OS=Mus musculus OX=10090 GN=Fdxacb1 PE=2 SV=2) HSP 1 Score: 45.1 bits (105), Expect = 9.3e-04 Identity = 47/197 (23.86%), Postives = 77/197 (39.09%), Query Frame = 0
BLAST of HG10005694 vs. ExPASy TrEMBL
Match: A0A6J1C681 (uncharacterized protein At4g26485-like OS=Momordica charantia OX=3673 GN=LOC111007760 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55 Identity = 122/215 (56.74%), Postives = 138/215 (64.19%), Query Frame = 0
BLAST of HG10005694 vs. ExPASy TrEMBL
Match: A0A6J1CEN8 (uncharacterized protein At4g26485-like OS=Momordica charantia OX=3673 GN=LOC111010538 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.3e-42 Identity = 95/183 (51.91%), Postives = 116/183 (63.39%), Query Frame = 0
BLAST of HG10005694 vs. ExPASy TrEMBL
Match: A0A6J5ULZ8 (DUF2431 domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS26353 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 5.2e-42 Identity = 98/188 (52.13%), Postives = 118/188 (62.77%), Query Frame = 0
BLAST of HG10005694 vs. ExPASy TrEMBL
Match: A0A6J5X978 (DUF2431 domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS26002 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.5e-41 Identity = 96/189 (50.79%), Postives = 117/189 (61.90%), Query Frame = 0
BLAST of HG10005694 vs. ExPASy TrEMBL
Match: A0A6P5SRX8 (uncharacterized protein At4g26485-like isoform X1 OS=Prunus avium OX=42229 GN=LOC110759253 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 5.8e-41 Identity = 88/197 (44.67%), Postives = 124/197 (62.94%), Query Frame = 0
BLAST of HG10005694 vs. TAIR 10
Match: AT5G56075.1 (Domain of unknown function (DUF2431) ) HSP 1 Score: 152.9 bits (385), Expect = 2.2e-37 Identity = 82/188 (43.62%), Postives = 114/188 (60.64%), Query Frame = 0
BLAST of HG10005694 vs. TAIR 10
Match: AT1G55790.1 (Domain of unknown function (DUF2431) ) HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35 Identity = 81/194 (41.75%), Postives = 105/194 (54.12%), Query Frame = 0
BLAST of HG10005694 vs. TAIR 10
Match: AT5G56060.1 (Domain of unknown function (DUF2431) ) HSP 1 Score: 138.7 bits (348), Expect = 4.4e-33 Identity = 79/185 (42.70%), Postives = 105/185 (56.76%), Query Frame = 0
BLAST of HG10005694 vs. TAIR 10
Match: AT5G25030.1 (Domain of unknown function (DUF2431) ) HSP 1 Score: 124.4 bits (311), Expect = 8.5e-29 Identity = 75/182 (41.21%), Postives = 103/182 (56.59%), Query Frame = 0
BLAST of HG10005694 vs. TAIR 10
Match: AT4G26485.1 (Domain of unknown function (DUF2431) ) HSP 1 Score: 99.0 bits (245), Expect = 3.8e-21 Identity = 60/170 (35.29%), Postives = 82/170 (48.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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