
HG10005692 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTTTCACCAACTTCTTAAAAGAAACCAAGGAGTTTCAGCAATTCCTAAGGGTTACTATGCAGTTTATGTTGGCGAGAGCCAAAAGAAGCGGTTCGTGATTTCAATAACGTGCTTGGATCAACCATGTTTTCAAGCCTTGCTTCGTCAGACGGAAGAAGAATTTGGTTACCATCATCCCATGGGTGGTCTTACTATTCATTGCAGAGATGACATCTTTACAGATCTCATCTCACATCTAAATGTTCTATGA ATGAGGTTTCACCAACTTCTTAAAAGAAACCAAGGAGTTTCAGCAATTCCTAAGGGTTACTATGCAGTTTATGTTGGCGAGAGCCAAAAGAAGCGGTTCGTGATTTCAATAACGTGCTTGGATCAACCATGTTTTCAAGCCTTGCTTCGTCAGACGGAAGAAGAATTTGGTTACCATCATCCCATGGGTGGTCTTACTATTCATTGCAGAGATGACATCTTTACAGATCTCATCTCACATCTAAATGTTCTATGA ATGAGGTTTCACCAACTTCTTAAAAGAAACCAAGGAGTTTCAGCAATTCCTAAGGGTTACTATGCAGTTTATGTTGGCGAGAGCCAAAAGAAGCGGTTCGTGATTTCAATAACGTGCTTGGATCAACCATGTTTTCAAGCCTTGCTTCGTCAGACGGAAGAAGAATTTGGTTACCATCATCCCATGGGTGGTCTTACTATTCATTGCAGAGATGACATCTTTACAGATCTCATCTCACATCTAAATGTTCTATGA MRFHQLLKRNQGVSAIPKGYYAVYVGESQKKRFVISITCLDQPCFQALLRQTEEEFGYHHPMGGLTIHCRDDIFTDLISHLNVL Homology
BLAST of HG10005692 vs. NCBI nr
Match: XP_022136192.1 (auxin-responsive protein SAUR24-like [Momordica charantia]) HSP 1 Score: 145.2 bits (365), Expect = 2.5e-31 Identity = 69/84 (82.14%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of HG10005692 vs. NCBI nr
Match: XP_011658582.1 (auxin-responsive protein SAUR24 [Cucumis sativus]) HSP 1 Score: 140.6 bits (353), Expect = 6.3e-30 Identity = 66/84 (78.57%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of HG10005692 vs. NCBI nr
Match: KAE8645660.1 (hypothetical protein Csa_020551 [Cucumis sativus]) HSP 1 Score: 140.6 bits (353), Expect = 6.3e-30 Identity = 66/83 (79.52%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of HG10005692 vs. NCBI nr
Match: KAA0049710.1 (auxin-induced protein 15A-like [Cucumis melo var. makuwa]) HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29 Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 0
BLAST of HG10005692 vs. NCBI nr
Match: XP_016900447.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0049702.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa] >TYK12170.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]) HSP 1 Score: 127.5 bits (319), Expect = 5.5e-26 Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of HG10005692 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 3.6e-20 Identity = 45/78 (57.69%), Postives = 61/78 (78.21%), Query Frame = 0
BLAST of HG10005692 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 6.1e-20 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 0
BLAST of HG10005692 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.0e-19 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of HG10005692 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.8e-19 Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of HG10005692 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 3.0e-19 Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 0
BLAST of HG10005692 vs. ExPASy TrEMBL
Match: A0A0A0K4K1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.5e-32 Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 0
BLAST of HG10005692 vs. ExPASy TrEMBL
Match: A0A6J1C4W2 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007947 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31 Identity = 69/84 (82.14%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of HG10005692 vs. ExPASy TrEMBL
Match: A0A0A0K5U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.0e-30 Identity = 66/84 (78.57%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of HG10005692 vs. ExPASy TrEMBL
Match: A0A5A7U363 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00540 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.2e-30 Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 0
BLAST of HG10005692 vs. ExPASy TrEMBL
Match: A0A5D3CL76 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001100 PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.7e-26 Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of HG10005692 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.4 bits (246), Expect = 1.5e-21 Identity = 47/84 (55.95%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of HG10005692 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 98.6 bits (244), Expect = 2.5e-21 Identity = 45/78 (57.69%), Postives = 61/78 (78.21%), Query Frame = 0
BLAST of HG10005692 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.8 bits (242), Expect = 4.3e-21 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 0
BLAST of HG10005692 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.1 bits (240), Expect = 7.4e-21 Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of HG10005692 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.1 bits (240), Expect = 7.4e-21 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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