HG10005687 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATTCGTCTACCTGGTGTTGTTAATGCCAAACAGATTCTCCAATGGATTCATCGCAGTTCAGATGCGATTCCGAAAGGCCACTTGGCTGTTTATGTTGGAGAAGCACAGAGGAGGCGCTTTGTTGTACCAGTTTCTTACTTGAGTCATCCTTCTTTTCAGACATTGTTGAGTCAAGCTGAAGAGGAGTTCGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACTCGAAGTTTGAATCTCTCATGA ATGGGTATTCGTCTACCTGGTGTTGTTAATGCCAAACAGATTCTCCAATGGATTCATCGCAGTTCAGATGCGATTCCGAAAGGCCACTTGGCTGTTTATGTTGGAGAAGCACAGAGGAGGCGCTTTGTTGTACCAGTTTCTTACTTGAGTCATCCTTCTTTTCAGACATTGTTGAGTCAAGCTGAAGAGGAGTTCGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACTCGAAGTTTGAATCTCTCATGA ATGGGTATTCGTCTACCTGGTGTTGTTAATGCCAAACAGATTCTCCAATGGATTCATCGCAGTTCAGATGCGATTCCGAAAGGCCACTTGGCTGTTTATGTTGGAGAAGCACAGAGGAGGCGCTTTGTTGTACCAGTTTCTTACTTGAGTCATCCTTCTTTTCAGACATTGTTGAGTCAAGCTGAAGAGGAGTTCGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACTCGAAGTTTGAATCTCTCATGA MGIRLPGVVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGFHHPMGGLTIPCREEAFLNLTRSLNLS Homology
BLAST of HG10005687 vs. NCBI nr
Match: XP_004144829.1 (auxin-responsive protein SAUR21 [Cucumis sativus]) HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38 Identity = 83/91 (91.21%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of HG10005687 vs. NCBI nr
Match: XP_008448002.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]) HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38 Identity = 81/91 (89.01%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of HG10005687 vs. NCBI nr
Match: XP_022136191.1 (auxin-induced protein X15-like [Momordica charantia]) HSP 1 Score: 167.5 bits (423), Expect = 5.3e-38 Identity = 80/91 (87.91%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of HG10005687 vs. NCBI nr
Match: KAA0049711.1 (auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYK12164.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa]) HSP 1 Score: 166.8 bits (421), Expect = 9.0e-38 Identity = 80/91 (87.91%), Postives = 86/91 (94.51%), Query Frame = 0
BLAST of HG10005687 vs. NCBI nr
Match: XP_034681854.1 (auxin-induced protein 15A-like [Vitis riparia]) HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30 Identity = 66/95 (69.47%), Postives = 80/95 (84.21%), Query Frame = 0
BLAST of HG10005687 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.6e-24 Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of HG10005687 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.6e-24 Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of HG10005687 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 4.5e-24 Identity = 49/80 (61.25%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of HG10005687 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 5.9e-24 Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of HG10005687 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23 Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of HG10005687 vs. ExPASy TrEMBL
Match: A0A0A0K2G3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009100 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.2e-39 Identity = 83/91 (91.21%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of HG10005687 vs. ExPASy TrEMBL
Match: A0A1S3BIQ0 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103490317 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38 Identity = 81/91 (89.01%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of HG10005687 vs. ExPASy TrEMBL
Match: A0A6J1C2U6 (auxin-induced protein X15-like OS=Momordica charantia OX=3673 GN=LOC111007946 PE=3 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.6e-38 Identity = 80/91 (87.91%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of HG10005687 vs. ExPASy TrEMBL
Match: A0A5D3CLW7 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001040 PE=3 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 4.4e-38 Identity = 80/91 (87.91%), Postives = 86/91 (94.51%), Query Frame = 0
BLAST of HG10005687 vs. ExPASy TrEMBL
Match: A0A438DMM2 (Auxin-induced protein 15A OS=Vitis vinifera OX=29760 GN=AX15A_3 PE=3 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 8.8e-31 Identity = 66/95 (69.47%), Postives = 80/95 (84.21%), Query Frame = 0
BLAST of HG10005687 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.5 bits (293), Expect = 5.8e-27 Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 0
BLAST of HG10005687 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 116.7 bits (291), Expect = 1.0e-26 Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 0
BLAST of HG10005687 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.5 bits (280), Expect = 1.9e-25 Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of HG10005687 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.5 bits (280), Expect = 1.9e-25 Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of HG10005687 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.7 bits (278), Expect = 3.2e-25 Identity = 49/80 (61.25%), Postives = 66/80 (82.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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