HG10005653 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005653
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	synaptotagmin-2-like
Location	Chr07: 4599997 .. 4601526 (+)
RNA-Seq Expression	HG10005653
Synteny	HG10005653

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTTTTCGGTACTATATTGGGCCTTTTTGGATTTGGAGTTGGGATCTCCATTGGCCTTGTTGCCGGTTACTTCCTTTTCATTTATGTTCAACCCAATAATGTTGAGGTTAGTGTTCCTTTGCTTTCGCTTTTCCCTCGAAAGAGTGGTTCATTTACTTGGGAATTTCACTTGGACAAGAAAATGTTTCATACTAATATATTCAGTACCATAACCTTTCAATGTAGAATGTGCTAGATCTTGTAGCACTTACTAATAAGGCCTTATTGATTATAGACACTGATATAATTAGATCTACTCTTCATAAACGAACTTGAGATTTGCAATCCCCGGTAAGGTCGGTTTAGGATCATGGAATCCTTATTCCTTTTCCATCATTGGATAGGAAAGGTTGTCGCACAAATTGTACTTCTAAGAAGTTGCTCCATAAATCCTATATTTATTCATATGAACTATGAAGAAGAAATTTGTGTCATGAAAGAGGTACTTATTTGTACCAATGGTACTTCAAACTTGGAACCAGCATGAAGAAATTAATGATGATTCTTTATCTTTTGATTTGCTTGGATTGTTTGGATTGAACCTTTAAGGGTCTATGTAAATAGTAAATGAGTTCAGGTCATGATGATCATCTACTTAGGATTTAATATCCTATAAGTTACCTTGACAATAAAATGTAGTGGGATCATGCAACCATGATTAGGTTTGGAAATTGAGTTCAGCTTGTGAACAATGATCTATTGAATTGGTTATTGAAGGTTTTCATGGAAATGGTGAACAAAGTTTGTCGGTATGCATATAAGTGTTTACTTTGCCATTGAACTAATCAGTTTTTCGGAAAATAATTTTATTTCTAGCTCGAGTAATTTAGGAGGTGTTTGGGACAAGGAGTGGAGTTGTTCAGTCTGGAAATTTGTTTAGCCCTGGAGCCCACAATGTAAAGAGTTAAAGAATCATGAAATTGATGTTTTTTAGTCGTGGGGTTCATAAACTCATTGGTCATACAAGGAGTGGAGTTGTTAACTACACTTCCCTAACTCTAACTCTTTGAGCCAAACATGCCATTAGAGATTCATGACGTGATCTCTATGTTATCAGTTGCATCTTGTGCTGCAATCACACGTTTAGTTCTTCTATGCAATAAGAACTCGATTTCTTAACCGGATAGGCTAGAGGTAGAAGGTAAGATAGATGGTCAACATTTCAGTTATTTTATTCTCTTTATAATGCCTCTCCTACATTCTATGGATTTTGATTTGAAGAATTTATGCTGGAATGGCCTGTTCAGGATCATGAAATTCGTCCACTTCTCGAAGAGGACACAATAAGATTGCAGCAAATGCTTCCTGAGATACCACTGTGGGTGAAATGTCCAGACTATGATCGTGTATGTAACTTGTATTAAATTCCTCTTGTCATATTATCTTTTGACTGAATTATCTTATAGTTTGTCTATCAACTCTTTTGTAGGTTGACTGGCTTAACAGGTTTATTGAATATATGTGGCCCTATCTTGATAAGGTTTAG

mRNA sequence

ATGGGGTTTTTCGGTACTATATTGGGCCTTTTTGGATTTGGAGTTGGGATCTCCATTGGCCTTGTTGCCGGTTACTTCCTTTTCATTTATGTTCAACCCAATAATGTTGAGGATCATGAAATTCGTCCACTTCTCGAAGAGGACACAATAAGATTGCAGCAAATGCTTCCTGAGATACCACTGTGGGTGAAATGTCCAGACTATGATCGTGTTGACTGGCTTAACAGGTTTATTGAATATATGTGGCCCTATCTTGATAAGGTTTAG

Coding sequence (CDS)

ATGGGGTTTTTCGGTACTATATTGGGCCTTTTTGGATTTGGAGTTGGGATCTCCATTGGCCTTGTTGCCGGTTACTTCCTTTTCATTTATGTTCAACCCAATAATGTTGAGGATCATGAAATTCGTCCACTTCTCGAAGAGGACACAATAAGATTGCAGCAAATGCTTCCTGAGATACCACTGTGGGTGAAATGTCCAGACTATGATCGTGTTGACTGGCTTAACAGGTTTATTGAATATATGTGGCCCTATCTTGATAAGGTTTAG

Protein sequence

MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIPLWVKCPDYDRVDWLNRFIEYMWPYLDKV

Homology

[Close]

BLAST of HG10005653 vs. NCBI nr
Match: XP_008447962.1 (PREDICTED: synaptotagmin-2-like [Cucumis melo])

HSP 1 Score: 182.6 bits (462), Expect = 1.5e-42
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFFGTILG FGFGVGISIGLV GYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP
Sbjct: 1  MGFFGTILGFFGFGVGISIGLVVGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVKCPDYDRVDWLNRFIEYMWPYLDK
Sbjct: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. NCBI nr
Match: XP_004144842.1 (synaptotagmin-2 [Cucumis sativus] >KGN43269.2 hypothetical protein Csa_020560 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 3.3e-42
Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFFGTILG FGFGVGISIGLV GYFLFIYVQPNNVEDHEIRPLL+EDTIRLQQMLPEIP
Sbjct: 1  MGFFGTILGFFGFGVGISIGLVVGYFLFIYVQPNNVEDHEIRPLLDEDTIRLQQMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVKCPDYDRVDWLNRFIEYMWPYLDK
Sbjct: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. NCBI nr
Match: XP_023554767.1 (synaptotagmin-1-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.0 bits (458), Expect = 4.4e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPL+EEDTIRLQQMLPEIP
Sbjct: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLVEEDTIRLQQMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVKCPDYDRVDWLNR I+YMWPYLDK
Sbjct: 61 LWVKCPDYDRVDWLNRLIQYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. NCBI nr
Match: XP_023554765.1 (synaptotagmin-2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.0 bits (458), Expect = 4.4e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPL+EEDTIRLQQMLPEIP
Sbjct: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLVEEDTIRLQQMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVKCPDYDRVDWLNR I+YMWPYLDK
Sbjct: 61 LWVKCPDYDRVDWLNRLIQYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. NCBI nr
Match: XP_023554766.1 (synaptotagmin-2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.0 bits (458), Expect = 4.4e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPL+EEDTIRLQQMLPEIP
Sbjct: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLVEEDTIRLQQMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVKCPDYDRVDWLNR I+YMWPYLDK
Sbjct: 61 LWVKCPDYDRVDWLNRLIQYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. ExPASy Swiss-Prot
Match: Q9SKR2 (Synaptotagmin-1 OS=Arabidopsis thaliana OX=3702 GN=SYT1 PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-30
Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFF TILG  GFGVGIS+GLV GY LF+Y+ PN+V+D EIR + ++D   + +MLPEIP
Sbjct: 1  MGFFSTILGFCGFGVGISLGLVIGYVLFVYLLPNDVKDPEIRSIADQDPKAMLRMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVK PD+DRVDW+NRF+EYMWPYLDK
Sbjct: 61 LWVKNPDFDRVDWINRFLEYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. ExPASy Swiss-Prot
Match: B6ETT4 (Synaptotagmin-2 OS=Arabidopsis thaliana OX=3702 GN=SYT2 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.6e-26
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MG   TILG+ GFG G +IG+V GY+LFIY Q  +VED EI+PL+E D+  +  M PEIP
Sbjct: 1  MGIISTILGVIGFGFGTTIGIVIGYYLFIYFQSTDVEDPEIKPLVELDSETIATMFPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          +WVK PD+DR+DWLN+ I +MWPY+DK
Sbjct: 61 MWVKNPDFDRIDWLNKLIGHMWPYMDK 87

[Close]

BLAST of HG10005653 vs. ExPASy Swiss-Prot
Match: Q7XA06 (Synaptotagmin-3 OS=Arabidopsis thaliana OX=3702 GN=SYT3 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.3e-24
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFF ++LG+ GF +GI IGL+ G+F+ IY QP++ E    RPL+E     L  +LP+IP
Sbjct: 1  MGFFTSVLGIIGFVIGIPIGLILGFFVLIYSQPSHQEYPPARPLVETSISVLLDLLPDIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LW+K PDY+RVDW N+FI YMWPYLDK
Sbjct: 61 LWMKNPDYERVDWFNKFISYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. ExPASy Swiss-Prot
Match: Q3TZZ7 (Extended synaptotagmin-2 OS=Mus musculus OX=10090 GN=Esyt2 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 7.6e-05
Identity = 16/40 (40.00%), Postives = 27/40 (67.50%), Query Frame = 0


Query: 46  EEDTIRLQQMLPEIPLWVKCPDYDRVDWLNRFIEYMWPYL 86
           EE  +RL     ++P WV  PD +R +WLN+ +++MWP++
Sbjct: 94  EEQAVRLGVRACDLPAWVHFPDTERAEWLNKTVKHMWPFI 133

[Close]

BLAST of HG10005653 vs. ExPASy Swiss-Prot
Match: A0FGR8 (Extended synaptotagmin-2 OS=Homo sapiens OX=9606 GN=ESYT2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.3e-04
Identity = 16/40 (40.00%), Postives = 27/40 (67.50%), Query Frame = 0


Query: 46  EEDTIRLQQMLPEIPLWVKCPDYDRVDWLNRFIEYMWPYL 86
           EE  +RL     ++P WV  PD +R +WLN+ +++MWP++
Sbjct: 170 EERVVRLGVRACDLPAWVHFPDTERAEWLNKTVKHMWPFI 209

[Close]

BLAST of HG10005653 vs. ExPASy TrEMBL
Match: A0A1S3BIM0 (synaptotagmin-2-like OS=Cucumis melo OX=3656 GN=LOC103490292 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.3e-43
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFFGTILG FGFGVGISIGLV GYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP
Sbjct: 1  MGFFGTILGFFGFGVGISIGLVVGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVKCPDYDRVDWLNRFIEYMWPYLDK
Sbjct: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. ExPASy TrEMBL
Match: A0A0A0K0K9 (SMP-LTD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G011850 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.6e-42
Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFFGTILG FGFGVGISIGLV GYFLFIYVQPNNVEDHEIRPLL+EDTIRLQQMLPEIP
Sbjct: 1  MGFFGTILGFFGFGVGISIGLVVGYFLFIYVQPNNVEDHEIRPLLDEDTIRLQQMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVKCPDYDRVDWLNRFIEYMWPYLDK
Sbjct: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. ExPASy TrEMBL
Match: A0A6J1GLT6 (synaptotagmin-2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455138 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.2e-42
Identity = 83/87 (95.40%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFFGTILG FGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPL+EEDTIRLQQMLPEIP
Sbjct: 1  MGFFGTILGFFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLVEEDTIRLQQMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVKCPDYDRVDWLNR I+YMWPYLDK
Sbjct: 61 LWVKCPDYDRVDWLNRLIQYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. ExPASy TrEMBL
Match: A0A6J1GKA1 (synaptotagmin-1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455138 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.2e-42
Identity = 83/87 (95.40%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFFGTILG FGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPL+EEDTIRLQQMLPEIP
Sbjct: 1  MGFFGTILGFFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLVEEDTIRLQQMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVKCPDYDRVDWLNR I+YMWPYLDK
Sbjct: 61 LWVKCPDYDRVDWLNRLIQYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. ExPASy TrEMBL
Match: A0A6J1HXY4 (synaptotagmin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111468471 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 8.9e-41
Identity = 82/87 (94.25%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFFGTILG FGFGVGISIGLVAGYFLFIYVQPNNVED EIRPL+EEDTIRLQQMLPEIP
Sbjct: 1  MGFFGTILGFFGFGVGISIGLVAGYFLFIYVQPNNVEDPEIRPLVEEDTIRLQQMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVKCPDYDRVDWLNR I+YMWPYLDK
Sbjct: 61 LWVKCPDYDRVDWLNRLIQYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. TAIR 10
Match: AT2G20990.1 (synaptotagmin A )

HSP 1 Score: 133.7 bits (335), Expect = 7.5e-32
Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFF TILG  GFGVGIS+GLV GY LF+Y+ PN+V+D EIR + ++D   + +MLPEIP
Sbjct: 1  MGFFSTILGFCGFGVGISLGLVIGYVLFVYLLPNDVKDPEIRSIADQDPKAMLRMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVK PD+DRVDW+NRF+EYMWPYLDK
Sbjct: 61 LWVKNPDFDRVDWINRFLEYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. TAIR 10
Match: AT2G20990.2 (synaptotagmin A )

HSP 1 Score: 133.7 bits (335), Expect = 7.5e-32
Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFF TILG  GFGVGIS+GLV GY LF+Y+ PN+V+D EIR + ++D   + +MLPEIP
Sbjct: 1  MGFFSTILGFCGFGVGISLGLVIGYVLFVYLLPNDVKDPEIRSIADQDPKAMLRMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVK PD+DRVDW+NRF+EYMWPYLDK
Sbjct: 61 LWVKNPDFDRVDWINRFLEYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. TAIR 10
Match: AT2G20990.3 (synaptotagmin A )

HSP 1 Score: 133.7 bits (335), Expect = 7.5e-32
Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFF TILG  GFGVGIS+GLV GY LF+Y+ PN+V+D EIR + ++D   + +MLPEIP
Sbjct: 1  MGFFSTILGFCGFGVGISLGLVIGYVLFVYLLPNDVKDPEIRSIADQDPKAMLRMLPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LWVK PD+DRVDW+NRF+EYMWPYLDK
Sbjct: 61 LWVKNPDFDRVDWINRFLEYMWPYLDK 87

[Close]

BLAST of HG10005653 vs. TAIR 10
Match: AT1G20080.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 118.2 bits (295), Expect = 3.2e-27
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MG   TILG+ GFG G +IG+V GY+LFIY Q  +VED EI+PL+E D+  +  M PEIP
Sbjct: 1  MGIISTILGVIGFGFGTTIGIVIGYYLFIYFQSTDVEDPEIKPLVELDSETIATMFPEIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          +WVK PD+DR+DWLN+ I +MWPY+DK
Sbjct: 61 MWVKNPDFDRIDWLNKLIGHMWPYMDK 87

[Close]

BLAST of HG10005653 vs. TAIR 10
Match: AT5G04220.2 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 112.1 bits (279), Expect = 2.3e-25
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 1  MGFFGTILGLFGFGVGISIGLVAGYFLFIYVQPNNVEDHEIRPLLEEDTIRLQQMLPEIP 60
          MGFF ++LG+ GF +GI IGL+ G+F+ IY QP++ E    RPL+E     L  +LP+IP
Sbjct: 1  MGFFTSVLGIIGFVIGIPIGLILGFFVLIYSQPSHQEYPPARPLVETSISVLLDLLPDIP 60

Query: 61 LWVKCPDYDRVDWLNRFIEYMWPYLDK 88
          LW+K PDY+RVDW N+FI YMWPYLDK
Sbjct: 61 LWMKNPDYERVDWFNKFISYMWPYLDK 87

The following BLAST results are available for this feature:

BLAST of HG10005653 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447962.1	1.5e-42	97.70	PREDICTED: synaptotagmin-2-like [Cucumis melo]	[more]
XP_004144842.1	3.3e-42	96.55	synaptotagmin-2 [Cucumis sativus] >KGN43269.2 hypothetical protein Csa_020560 [C...	[more]
XP_023554767.1	4.4e-42	96.55	synaptotagmin-1-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023554765.1	4.4e-42	96.55	synaptotagmin-2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023554766.1	4.4e-42	96.55	synaptotagmin-2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10005653 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKR2	1.0e-30	68.97	Synaptotagmin-1 OS=Arabidopsis thaliana OX=3702 GN=SYT1 PE=1 SV=2	[more]
B6ETT4	4.6e-26	59.77	Synaptotagmin-2 OS=Arabidopsis thaliana OX=3702 GN=SYT2 PE=2 SV=1	[more]
Q7XA06	3.3e-24	57.47	Synaptotagmin-3 OS=Arabidopsis thaliana OX=3702 GN=SYT3 PE=2 SV=1	[more]
Q3TZZ7	7.6e-05	40.00	Extended synaptotagmin-2 OS=Mus musculus OX=10090 GN=Esyt2 PE=1 SV=1	[more]
A0FGR8	1.3e-04	40.00	Extended synaptotagmin-2 OS=Homo sapiens OX=9606 GN=ESYT2 PE=1 SV=1	[more]

BLAST of HG10005653 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIM0	7.3e-43	97.70	synaptotagmin-2-like OS=Cucumis melo OX=3656 GN=LOC103490292 PE=3 SV=1	[more]
A0A0A0K0K9	1.6e-42	96.55	SMP-LTD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G011850 PE=...	[more]
A0A6J1GLT6	6.2e-42	95.40	synaptotagmin-2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455138 PE...	[more]
A0A6J1GKA1	6.2e-42	95.40	synaptotagmin-1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455138 PE...	[more]
A0A6J1HXY4	8.9e-41	94.25	synaptotagmin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111468471 PE=3 SV=1	[more]

BLAST of HG10005653 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20990.1	7.5e-32	68.97	synaptotagmin A	[more]
AT2G20990.2	7.5e-32	68.97	synaptotagmin A	[more]
AT2G20990.3	7.5e-32	68.97	synaptotagmin A	[more]
AT1G20080.1	3.2e-27	59.77	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT5G04220.2	2.3e-25	57.47	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10774:SF197	CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN-RELATED	coord: 1..87
IPR045050	Synaptotagmin, plant	PANTHER	PTHR10774	EXTENDED SYNAPTOTAGMIN-RELATED	coord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005653.1	HG10005653.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0046872	metal ion binding