HG10005532 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAATGAGGTGATTGAATTTGATATTGGATTGGGAGGAGGGAGTGGGAGGGAGGGAGATGACTATTCTATGGGTATTGTGCATCATTCTATTGAGGATGAGGAAATGGTTGATAGCCCTCCTTTCAGCAGTCTTGGTGGCGGCGCTGGCAGTGGTGAGATATATCTTCCTGAAGGTGATCTTTTGGATCTTGAACCTTATGAAGGAATGGAATTTGAGTCTGAAGAAGCTGCCAAGGCTTTCTATAATTCGTATGCTCGACGTGTTGGGTTTAGTACTCGTGTCAGCTCCTCCCGACGGTCTAGGCGTGATGGAGCGATTATACAAAGGCAATTTGTTTGTGCCAAAGAGGGTTTTAGGAATATGAATGAGAAGCGAACTAAAGACAGAGAAATTAAGCGTCCTCGAACTATCACAAGAGTGGGTTGCAAAGCATCCTTGTCTGTAAAGATGCATGATTCTGGGAAATGGGTTGTATCTGGATTTGTAAGAGAGCATAATCATGAGTTAGTTCCTCCTGACCAGGTGCACTGCTTGCGGTCTCATAGGCAAATATCAGGTCCAGCAAAGACCTTAATTGATACTTTACAGGCTGCTGGGATGGGTCCTCGTAGGATTATGTCGGCACTGATAAAGGAGTATGGAGGAATCAGTAAAGTTGGATTTACAGAGGTGGATTGTCGAAATTATATGAGGAATAATCGCCAAAGGAGCTTAGAAGGAGACATTCAACTGCTTTTGGATTACTTGAGGCAAATGCATTCTGAAAATCCTAACTTCTTCTATGCTGTTCAGGGTGAGGAGGATCAGTGTGTGGGAAATGTCTTTTGGGCCGATCCAAAAGCTCGGATGAACTATACTTACTTTGGTGATACTGTTACATTTGACACTACCTATAGGTCAAACAGATATCGTCTGCCCTTTGCTCCGTTCACTGGGGTGAATCACCATGGACAGCCTGTGTTGTTTGGTTGTGCTTTTCTAATAAATGAATCCGAAGCGTCATTTAATTGGCTATTTAGAACGTGGCTTTTGGCAATGTCTGGTCGCCCACCTGTGTCAATTACTACTGATCACGATGCAGTAATACAGTCAGCCATTACACAAGTTTTCCCTGAGACCCGTCACCGTTTCTGCAAATGGCATATCTTCAAGAAATGCCAGGAGATGCTGTCTCATGTGTTTCTTAAACACCCAAGTTTTGAAGCTGACTTCCACAAATGTGTAAACTTGACTGACTCTATCGAGGAATTTGAGTCCTGCTGGCTGTCACTTGTTGACAGATATGATCTCAGGGATCATGAGTGGCTTCAGACAATTTACTCTGCTCGGAGGCAGTGGGTTCCGGTGTATTTACGGGACACTTTTTTTGCTGAAATGTCTATTACACAACGAAGTGATAGCATGAATTCATATTTTGATGGGTATGTGAATGCTTCGACCAATTTGAGTCAGTTCTTTAAACTGTATGAAAAAGCTTTAGAGAGTCGGAATGAGAAAGAAGTGAAAGCAGATTATGATACAATGAACACTTCCCCTGTTCTAAAGACTCCATCTCCAATGGAAAAACAGGTTTCTGAGCTTTACACCAGGAAGCTGTTCTCAAGGTTCCAAGAGGAGTTAGTTGGCACGTTAACTTTTATGGCATCGAAAGCTGATGATGATGGGGAAATTATAACATATCAAGTGGCCAAATTTGGAGAGGATCATAAAGCTCACCATGTGAAATTTAATGTTTTGGAGATGAGAGCAAGTTGTAGTTGCCAGATGTTCGAGTTCTCAGGTCTTTTGTGCAGACATATCTTGGCTGTCTTCAGAGTGACCAATGTTCTTACACTTCCATCTTATTACATATTGAAAAGATGGACAAGAAATGCGAAAAGTAATGTGATTTTGGAGGACCATGTGAATGATATCTATAACAACTATCTTGAATCTCACACTGTGAGATACAATACCCTGCGCCACGAGGCTTTTAAATTTATAGAGGAAGGAGCAAAGACTGTGGATATGTATAATGTGGCTAAAGATGCCCTTCAGGAGGCTACTAAAAGGGTTGCTCATACAACGAGGAATGATGGCAAAATTTCTACAATCAATGGGCGAATTAAAGTGGACCCTGTAAATGTCAGAAGCTATACAAATCACAGTAGTAGCAGGGATCATGGCGAGAGCTTGAGTAAAAACATGTCTGAGGTAGGTACTCACTTTCTTTTGTATCTCCCGGTTGTCTTTTATTTGATTGGAATTCGTTATTCAAGATTTCTAGATAGAAGAAAAGGGGAGTTTCTACTCCTTATCTTACAGATTTGATGGACTTCATAATCGTATTTTCTTTCAATCTTGCTCTTACACTTATTCCAACTTATCAACTTTTTAACTATATGGTTGGTTGGATCTTGCAATATGCATAGGAGTTTGATATATGATAGAACTAGAATCGGCACCTGGAAGTTCTAGCTCTCACTGCATAACGTGGGCACTTGCTACATTTTGAGTTTCTGAGTACTTCACTATCCTTTCTCATGAAATTTCTATTTTCTTGGGACAGTGTTACGGTATTTGGAAAATATGTTTTATCCTAGTTTTAGATTGATTTATATGTTAGTAACCATGCACATAACTTCAATTTTATTTCATTAATTTGTTAATTGACAGCATGTATACTTACTGAACGCGTGCAATTGTGTGGTTTGATTTTGTTTCTCTTTTTTTTCCGCTTTTTCTTTGTCCCGGTAAGAAATCAAGTTTTCATTAAGAAAAATGAAAGAATGTACAAGGGCATATAGAAAAGTCTACAAAGGAGTTTTCAACTACATACAATAATGGATTCTAATTCAAAAGAATAACACCAAGCTGATAATCACTTTGTATTTGTTATTTCTTGATGCTGCTTTATAATGAACCTTTATCTGAGTTCCATCGTTGGATTTTGAGTGTTGTCTGGATAATCCTTCATTCACTTGCGTGGCCGGACATGCATAATTTTGTTCTGACATAATTTTTACTCTTGAAATTTTTGGCAGGATGACTTGGACAAGAAAATCAATGAACTTACCAACGAATTGGCGTGTGCGAATCGGAAGTGTGAAGTCTATCGGTCTAACCTTTTTTCAGTGCTGAAAGACATTGAGGACCACAAGTTGCAATTATCTATTAAAGTGCAGAACATAAAAATTAGTATGAAAGACAGCATTTGA ATGGATAATGAGGTGATTGAATTTGATATTGGATTGGGAGGAGGGAGTGGGAGGGAGGGAGATGACTATTCTATGGGTATTGTGCATCATTCTATTGAGGATGAGGAAATGGTTGATAGCCCTCCTTTCAGCAGTCTTGGTGGCGGCGCTGGCAGTGAGGGTTTTAGGAATATGAATGAGAAGCGAACTAAAGACAGAGAAATTAAGCGTCCTCGAACTATCACAAGAGTGGGTTGCAAAGCATCCTTGTCTGTAAAGATGCATGATTCTGGGAAATGGGTTGTATCTGGATTTGTAAGAGAGCATAATCATGAGTTAGTTCCTCCTGACCAGGTGCACTGCTTGCGGTCTCATAGGCAAATATCAGGTCCAGCAAAGACCTTAATTGATACTTTACAGGCTGCTGGGATGGGTCCTCGTAGGATTATGTCGGCACTGATAAAGGAGTATGGAGGAATCAGTAAAGTTGGATTTACAGAGGACCATGTGAATGATATCTATAACAACTATCTTGAATCTCACACTGTGAGATACAATACCCTGCGCCACGAGGCTTTTAAATTTATAGAGGAAGGAGCAAAGACTGTGGATATGTATAATGTGGCTAAAGATGCCCTTCAGGAGGCTACTAAAAGGGTTGCTCATACAACGAGGAATGATGGCAAAATTTCTACAATCAATGGGCGAATTAAAGTGGACCCTGTAAATGTCAGAAGCTATACAAATCACAGTAGTAGCAGGGATCATGGCGAGAGCTTGAGTAAAAACATGTCTGAGGATGACTTGGACAAGAAAATCAATGAACTTACCAACGAATTGGCGTGTGCGAATCGGAAGTGTGAAGTCTATCGGTCTAACCTTTTTTCAGTGCTGAAAGACATTGAGGACCACAAGTTGCAATTATCTATTAAAGTGCAGAACATAAAAATTAGTATGAAAGACAGCATTTGA ATGGATAATGAGGTGATTGAATTTGATATTGGATTGGGAGGAGGGAGTGGGAGGGAGGGAGATGACTATTCTATGGGTATTGTGCATCATTCTATTGAGGATGAGGAAATGGTTGATAGCCCTCCTTTCAGCAGTCTTGGTGGCGGCGCTGGCAGTGAGGGTTTTAGGAATATGAATGAGAAGCGAACTAAAGACAGAGAAATTAAGCGTCCTCGAACTATCACAAGAGTGGGTTGCAAAGCATCCTTGTCTGTAAAGATGCATGATTCTGGGAAATGGGTTGTATCTGGATTTGTAAGAGAGCATAATCATGAGTTAGTTCCTCCTGACCAGGTGCACTGCTTGCGGTCTCATAGGCAAATATCAGGTCCAGCAAAGACCTTAATTGATACTTTACAGGCTGCTGGGATGGGTCCTCGTAGGATTATGTCGGCACTGATAAAGGAGTATGGAGGAATCAGTAAAGTTGGATTTACAGAGGACCATGTGAATGATATCTATAACAACTATCTTGAATCTCACACTGTGAGATACAATACCCTGCGCCACGAGGCTTTTAAATTTATAGAGGAAGGAGCAAAGACTGTGGATATGTATAATGTGGCTAAAGATGCCCTTCAGGAGGCTACTAAAAGGGTTGCTCATACAACGAGGAATGATGGCAAAATTTCTACAATCAATGGGCGAATTAAAGTGGACCCTGTAAATGTCAGAAGCTATACAAATCACAGTAGTAGCAGGGATCATGGCGAGAGCTTGAGTAAAAACATGTCTGAGGATGACTTGGACAAGAAAATCAATGAACTTACCAACGAATTGGCGTGTGCGAATCGGAAGTGTGAAGTCTATCGGTCTAACCTTTTTTCAGTGCTGAAAGACATTGAGGACCACAAGTTGCAATTATCTATTAAAGTGCAGAACATAAAAATTAGTATGAAAGACAGCATTTGA MDNEVIEFDIGLGGGSGREGDDYSMGIVHHSIEDEEMVDSPPFSSLGGGAGSEGFRNMNEKRTKDREIKRPRTITRVGCKASLSVKMHDSGKWVVSGFVREHNHELVPPDQVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEDHVNDIYNNYLESHTVRYNTLRHEAFKFIEEGAKTVDMYNVAKDALQEATKRVAHTTRNDGKISTINGRIKVDPVNVRSYTNHSSSRDHGESLSKNMSEDDLDKKINELTNELACANRKCEVYRSNLFSVLKDIEDHKLQLSIKVQNIKISMKDSI Homology
BLAST of HG10005532 vs. NCBI nr
Match: XP_038887791.1 (protein FAR1-RELATED SEQUENCE 5 [Benincasa hispida]) HSP 1 Score: 422.9 bits (1086), Expect = 2.4e-114 Identity = 308/790 (38.99%), Postives = 312/790 (39.49%), Query Frame = 0
BLAST of HG10005532 vs. NCBI nr
Match: XP_004144566.1 (protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >XP_011658644.1 protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus] >KAE8645704.1 hypothetical protein Csa_020250 [Cucumis sativus]) HSP 1 Score: 412.1 bits (1058), Expect = 4.2e-111 Identity = 301/790 (38.10%), Postives = 308/790 (38.99%), Query Frame = 0
BLAST of HG10005532 vs. NCBI nr
Match: XP_008451178.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo] >XP_008451181.1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis melo]) HSP 1 Score: 410.6 bits (1054), Expect = 1.2e-110 Identity = 300/790 (37.97%), Postives = 307/790 (38.86%), Query Frame = 0
BLAST of HG10005532 vs. NCBI nr
Match: XP_022952696.1 (protein FAR1-RELATED SEQUENCE 5 [Cucurbita moschata]) HSP 1 Score: 406.0 bits (1042), Expect = 3.0e-109 Identity = 300/790 (37.97%), Postives = 306/790 (38.73%), Query Frame = 0
BLAST of HG10005532 vs. NCBI nr
Match: XP_022968978.1 (protein FAR1-RELATED SEQUENCE 5 [Cucurbita maxima]) HSP 1 Score: 405.6 bits (1041), Expect = 3.9e-109 Identity = 300/790 (37.97%), Postives = 305/790 (38.61%), Query Frame = 0
BLAST of HG10005532 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 5.4e-61 Identity = 134/244 (54.92%), Postives = 154/244 (63.11%), Query Frame = 0
HSP 2 Score: 135.2 bits (339), Expect = 1.3e-30 Identity = 77/157 (49.04%), Postives = 103/157 (65.61%), Query Frame = 0
BLAST of HG10005532 vs. ExPASy Swiss-Prot
Match: Q9SZL7 (Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis thaliana OX=3702 GN=FRS9 PE=2 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 5.1e-19 Identity = 62/169 (36.69%), Postives = 98/169 (57.99%), Query Frame = 0
BLAST of HG10005532 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.7e-09 Identity = 30/88 (34.09%), Postives = 46/88 (52.27%), Query Frame = 0
BLAST of HG10005532 vs. ExPASy Swiss-Prot
Match: Q6NQJ7 (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=FRS4 PE=2 SV=2) HSP 1 Score: 62.8 bits (151), Expect = 8.2e-09 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of HG10005532 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06 Identity = 28/67 (41.79%), Postives = 33/67 (49.25%), Query Frame = 0
BLAST of HG10005532 vs. ExPASy TrEMBL
Match: A0A1S3BQA8 (Protein FAR1-RELATED SEQUENCE OS=Cucumis melo OX=3656 GN=LOC103492554 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 5.9e-111 Identity = 300/790 (37.97%), Postives = 307/790 (38.86%), Query Frame = 0
BLAST of HG10005532 vs. ExPASy TrEMBL
Match: A0A6J1GKY0 (Protein FAR1-RELATED SEQUENCE OS=Cucurbita moschata OX=3662 GN=LOC111455313 PE=3 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.5e-109 Identity = 300/790 (37.97%), Postives = 306/790 (38.73%), Query Frame = 0
BLAST of HG10005532 vs. ExPASy TrEMBL
Match: A0A6J1HZN4 (Protein FAR1-RELATED SEQUENCE OS=Cucurbita maxima OX=3661 GN=LOC111468123 PE=3 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.9e-109 Identity = 300/790 (37.97%), Postives = 305/790 (38.61%), Query Frame = 0
BLAST of HG10005532 vs. ExPASy TrEMBL
Match: A0A6J1C2N4 (Protein FAR1-RELATED SEQUENCE OS=Momordica charantia OX=3673 GN=LOC111007706 PE=3 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 2.5e-109 Identity = 299/790 (37.85%), Postives = 302/790 (38.23%), Query Frame = 0
BLAST of HG10005532 vs. ExPASy TrEMBL
Match: A0A0A0K508 (Protein FAR1-RELATED SEQUENCE OS=Cucumis sativus OX=3659 GN=Csa_7G029420 PE=3 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 5.5e-109 Identity = 296/786 (37.66%), Postives = 304/786 (38.68%), Query Frame = 0
BLAST of HG10005532 vs. TAIR 10
Match: AT4G38180.1 (FAR1-related sequence 5 ) HSP 1 Score: 236.1 bits (601), Expect = 3.8e-62 Identity = 134/244 (54.92%), Postives = 154/244 (63.11%), Query Frame = 0
HSP 2 Score: 135.2 bits (339), Expect = 9.2e-32 Identity = 77/157 (49.04%), Postives = 103/157 (65.61%), Query Frame = 0
BLAST of HG10005532 vs. TAIR 10
Match: AT4G38170.1 (FAR1-related sequence 9 ) HSP 1 Score: 96.7 bits (239), Expect = 3.6e-20 Identity = 62/169 (36.69%), Postives = 98/169 (57.99%), Query Frame = 0
BLAST of HG10005532 vs. TAIR 10
Match: AT4G15090.1 (FRS (FAR1 Related Sequences) transcription factor family ) HSP 1 Score: 63.9 bits (154), Expect = 2.6e-10 Identity = 30/88 (34.09%), Postives = 46/88 (52.27%), Query Frame = 0
BLAST of HG10005532 vs. TAIR 10
Match: AT1G76320.1 (FAR1-related sequence 4 ) HSP 1 Score: 62.8 bits (151), Expect = 5.8e-10 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of HG10005532 vs. TAIR 10
Match: AT1G76320.2 (FAR1-related sequence 4 ) HSP 1 Score: 62.8 bits (151), Expect = 5.8e-10 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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